RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0334
>gnl|CDD|35555 KOG0334, KOG0334, KOG0334, RNA helicase [RNA processing and modification]. Length = 997
Score = 185 bits (471), Expect = 3e-47
Identities = 109/358 (30%), Positives = 184/358 (51%), Gaps = 10/358 (2%)
Query: 11 IGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALASTLLAENDRFS 70
I E L + GY T +Q + + +DV+ A+TGSGKT+AF L + + +
Sbjct: 376 ILETLKKLGYEKPTPIQAQAIPAIMSGRDVIGVAKTGSGKTLAFLLPMIRHIKDQR-PLE 434
Query: 71 PASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDLQNGAHIVVG 130
P+AL +APTRELA+Q+ RE+ G+ V GG + ++ +L+ GA IVV
Sbjct: 435 EGDGPIALILAPTRELAMQIHREVRKFLKLLGIRVVCVYGGSGISQQIAELKRGAEIVVC 494
Query: 131 TPGRLCDHI---RGKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSSPKKRRMLMFSA 187
TPGR+ D + G+ N+ + +VLDEAD M D+GF I IL + R+ ++FSA
Sbjct: 495 TPGRMIDILCANSGRVTNLRRVTYLVLDEADRMFDMGFEPQITRILQNLRPDRQTVLFSA 554
Query: 188 TISPAITTLAKNYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILR----YHG 243
T ++ LA+ K V + + + ++ + A + + +L +
Sbjct: 555 TFPRSMEALARKVLKKPVEIIVGGRSVVCKEVTQVVRVCA--IENEKFLKLLELLGERYE 612
Query: 244 AKNAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGRARVCIATDV 303
I+F + + L + + +L G + Q +RS+ ++ ++G + +AT V
Sbjct: 613 DGKTIIFVDKQEKADALLRDLQKAGYNCDSLHGGVDQHDRSSTIEDFKNGVVNLLVATSV 672
Query: 304 AARGIDLPDLELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFR 361
ARG+D+ +L LV++ + ++ E+ +HR GRTGRAGRKG +V I + + A L +
Sbjct: 673 VARGLDVKELILVVNYDFPNHYEDYVHRVGRTGRAGRKGAAVTFITPDQLKYAGDLCK 730