RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0346

>gnl|CDD|35567 KOG0346, KOG0346, KOG0346, RNA helicase [RNA processing and modification]. Length = 569
 Score =  141 bits (357), Expect = 4e-34
 Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 43/394 (10%)

Query: 2   KIFE--NIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALA 59
           K FE   +   + +A+++ G+   T +Q + +   L  KDV+  A+TGSGKT A+ + L 
Sbjct: 19  KTFEEFGLDSRLLKAITKLGWEKPTLIQSSAIPLALEGKDVVARARTGSGKTAAYLIPLL 78

Query: 60  STLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVC--IGGVSVHRE 117
             LLAE         P A+ + PT+ELA QV + +E L       +        +S    
Sbjct: 79  QKLLAEKKTNDGEQGPSAVILVPTKELAQQVYKVIEKLVEYCSKDLRAINLASSMSDSVN 138

Query: 118 RRDLQNGAHIVVGTPGRLCDHIR-GKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS 176
              L +   IVV TP +L  H+  G    +  L  +V+DEAD +L  G+ +D++ +    
Sbjct: 139 SVALMDLPDIVVATPAKLLRHLAAGVLEYLDSLSFLVVDEADLLLSFGYEEDLKKLRSHL 198

Query: 177 PKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSD-IDYRAVLVALSDRDNAI 235
           P+  +  + SAT+S  +  L K +  + V + +      + D +    V  +  D+   +
Sbjct: 199 PRIYQCFLMSATLSDDVQALKKLFLHNPVILKLTEGELPNPDQLTQYQVKCSEEDKFLLL 258

Query: 236 VNILRYHGAK-NAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGR 294
             +L+    +  +++F +T     R    L +   +   L+ EL    R + ++    G 
Sbjct: 259 YALLKLRLIRGKSLIFVNTIDRCYRLKLFLEQFGIKSCILNSELPANSRCHIIEQFNKGL 318

Query: 295 ARVCIATDV-----------------------------------AARGIDLPDLELVIHA 319
             + IATD                                     +RGID   +  V++ 
Sbjct: 319 YDIVIATDDSADGDKLEEEVKGKSDEKNPKNDKKSKKKLDKESGVSRGIDFHHVSNVLNF 378

Query: 320 ELSSNPENLLHRSGRTGRAGRKGMSV-FVIPQNM 352
           +      + +HR GRT R   KG ++ FV P+  
Sbjct: 379 DFPETVTSYIHRVGRTARGNNKGTALSFVSPKEE 412