RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0346
>gnl|CDD|35567 KOG0346, KOG0346, KOG0346, RNA helicase [RNA processing and modification]. Length = 569
Score = 141 bits (357), Expect = 4e-34
Identities = 95/394 (24%), Positives = 166/394 (42%), Gaps = 43/394 (10%)
Query: 2 KIFE--NIPQVIGEALSERGYVNLTSVQEAILNPDLREKDVLVSAQTGSGKTVAFGLALA 59
K FE + + +A+++ G+ T +Q + + L KDV+ A+TGSGKT A+ + L
Sbjct: 19 KTFEEFGLDSRLLKAITKLGWEKPTLIQSSAIPLALEGKDVVARARTGSGKTAAYLIPLL 78
Query: 60 STLLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVC--IGGVSVHRE 117
LLAE P A+ + PT+ELA QV + +E L + +S
Sbjct: 79 QKLLAEKKTNDGEQGPSAVILVPTKELAQQVYKVIEKLVEYCSKDLRAINLASSMSDSVN 138
Query: 118 RRDLQNGAHIVVGTPGRLCDHIR-GKGLNISHLKAVVLDEADEMLDLGFRDDIEFILDSS 176
L + IVV TP +L H+ G + L +V+DEAD +L G+ +D++ +
Sbjct: 139 SVALMDLPDIVVATPAKLLRHLAAGVLEYLDSLSFLVVDEADLLLSFGYEEDLKKLRSHL 198
Query: 177 PKKRRMLMFSATISPAITTLAKNYQKDAVRVNIASENRQHSD-IDYRAVLVALSDRDNAI 235
P+ + + SAT+S + L K + + V + + + D + V + D+ +
Sbjct: 199 PRIYQCFLMSATLSDDVQALKKLFLHNPVILKLTEGELPNPDQLTQYQVKCSEEDKFLLL 258
Query: 236 VNILRYHGAK-NAIVFCSTRASVSRFTKVLAEHLFQVVALSGELSQQERSNALQMMRDGR 294
+L+ + +++F +T R L + + L+ EL R + ++ G
Sbjct: 259 YALLKLRLIRGKSLIFVNTIDRCYRLKLFLEQFGIKSCILNSELPANSRCHIIEQFNKGL 318
Query: 295 ARVCIATDV-----------------------------------AARGIDLPDLELVIHA 319
+ IATD +RGID + V++
Sbjct: 319 YDIVIATDDSADGDKLEEEVKGKSDEKNPKNDKKSKKKLDKESGVSRGIDFHHVSNVLNF 378
Query: 320 ELSSNPENLLHRSGRTGRAGRKGMSV-FVIPQNM 352
+ + +HR GRT R KG ++ FV P+
Sbjct: 379 DFPETVTSYIHRVGRTARGNNKGTALSFVSPKEE 412