RPSBLAST alignment for GI: 254780601 and conserved domain: KOG0350
>gnl|CDD|35571 KOG0350, KOG0350, KOG0350, DEAD-box ATP-dependent RNA helicase [RNA processing and modification]. Length = 620
Score = 161 bits (409), Expect = 4e-40
Identities = 108/411 (26%), Positives = 184/411 (44%), Gaps = 62/411 (15%)
Query: 11 IGEALSERGYVNLTSVQEAILN---------PDLREKDVLVSAQTGSGKTVAFGLALAST 61
I + L + L VQ A+L P R +D+ V+A TGSGKT+A+ + +
Sbjct: 148 IDQLLVKMAISRLFPVQYAVLPSLLEEIRSPPPSRPRDICVNAPTGSGKTLAYVIPIVQL 207
Query: 62 LLAENDRFSPASAPLALAIAPTRELAVQVGRELEWLYAKTGVVVAVCIGGVSVHRERRDL 121
L + P A+ I PTRELA+QV + L + TG+ V G S+ E R L
Sbjct: 208 LSSR-----PVKRLRAVVIVPTRELALQVYDTFKRLNSGTGLAVCSLSGQNSLEDEARQL 262
Query: 122 QN-----GAHIVVGTPGRLCDHIRG-KGLNISHLKAVVLDEADEMLDLGFRD-------- 167
+ I+V TPGRL DH+ K ++ HL+ +V+DEAD +LD F++
Sbjct: 263 ASDPPECRIDILVATPGRLVDHLNNTKSFDLKHLRFLVIDEADRLLDQSFQEWLDTVMSL 322
Query: 168 --------------------------DIEFILDSSPKKRRMLMFSATISPAITTLAK--- 198
++ L L+FSAT+S + L
Sbjct: 323 CKTMKRVACLDNIIRQRQAPQPTVLSELLTKLGKLYPPLWKLVFSATLSQDPSKLKDLTL 382
Query: 199 -NYQKDAVRVNIASENRQHSDIDYRAVLVALSDRDNAIVNILRYHGAKNAIVFCSTRASV 257
+ V + S + +R V+ + A+ ++ + + F ++ +S
Sbjct: 383 HIPRLFHVSKPLIGRYSLPSSLSHRLVVTEPKFKPLAVYALITSNKLNRTLCFVNSVSSA 442
Query: 258 SRFTKVLAEHL----FQVVALSGELSQQERSNALQMMRDGRARVCIATDVAARGIDLPDL 313
+R VL F+V +G+L+ + R L+ G V I +D ARGID+ D+
Sbjct: 443 NRLAHVLKVEFCSDNFKVSEFTGQLNGKRRYKMLEKFAKGDINVLICSDALARGIDVNDV 502
Query: 314 ELVIHAELSSNPENLLHRSGRTGRAGRKGMSVFVIPQNMQRRAERLFREAN 364
+ VI+ + ++ + +HR+GRT RAG+ G ++ ++ ++ +R +L ++ N
Sbjct: 503 DNVINYDPPASDKTYVHRAGRTARAGQDGYAITLLDKHEKRLFSKLLKKTN 553