HHsearch alignment for GI: 254780602 and conserved domain: COG1003
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism].
Probab=98.52 E-value=3.4e-08 Score=69.99 Aligned_cols=194 Identities=18% Similarity=0.276 Sum_probs=120.8
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 72665658974988999999999998388756998---778989999999986421013333223323345433332--2
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF--N 106 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~--~ 106 (400)
T Consensus 67 ~m~PLGSCTMK~Np~~e~~~~~~p~f-~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~D--avsLQP~AGAqGE~aGll 143 (496)
T COG1003 67 GMIPLGSCTMKLNPKAEMKPATWPEF-ANIHPFQPEEQVQGYLELIYELQEWLKEITGMD--AVSLQPNAGAQGEYAGLL 143 (496)
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCCH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--EEECCCCCCCCHHHHHHH
T ss_conf 76177645215584121122246004-424999986888999999999999999740976--264067877641567899
Q ss_pred CCCCC-CCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 22222-3322----322223333232222222222222222222223222103331000122122012113542100001
Q gi|254780602|r 107 ALMAT-VNMG----DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVY 181 (400)
Q Consensus 107 ~~~~~-~~~G----d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~ 181 (400)
T Consensus 144 ~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~--VDlddLk~k~~~~~AalMiTnPs-T~G-vF 219 (496)
T COG1003 144 AIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGN--VDLDDLRAKAEDNLAALMITNPS-TLG-VF 219 (496)
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCCCC--CCHHHHHHHHCCCEEEEEECCCC-CCC-CC
T ss_conf 999999975887776798316556898656765485599983289887--16999998741311588861686-454-50
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CC-CCCEEEEECCCCCCCCCC
Q ss_conf 2333321112233333201110122110000012233222111-23-332257414654432234
Q gi|254780602|r 182 SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PS-LYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 182 s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~-~~~~~i~~~S~SK~~~~~ 244 (400)
T Consensus 220 -E~~I~ei~~iv-H~~Gg~v---------Y~DGANlNA~vG~~rPGd~G~DV~HlN-LHKTF~iP 272 (496)
T COG1003 220 -EEDIREICEIV-HEAGGQV---------YYDGANLNAIVGLARPGDMGFDVVHLN-LHKTFCIP 272 (496)
T ss_pred -HHHHHHHHHHH-HHCCCEE---------EECCCCHHHHHCCCCCCCCCCCEEEEE-CCCCCCCC
T ss_conf -45199999999-9729989---------844754352522556655656357752-23110258