HHsearch alignment for GI: 254780602 and conserved domain: COG1982
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism].
Probab=99.01 E-value=2.1e-10 Score=83.41 Aligned_cols=149 Identities=17% Similarity=0.287 Sum_probs=98.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCHHHHHHCCCCC--CC-
Q ss_conf 3323345433332222222332232222333323222222222222222222222322----2103331000122--12-
Q gi|254780602|r 93 QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNF----QVSPEKLEQAITP--KT- 165 (400)
Q Consensus 93 ~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~----~~d~~~l~~~i~~--~~- 165 (400)
T Consensus 88 tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~al~~~~~~~ 167 (557)
T COG1982 88 TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE 167 (557)
T ss_pred EEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHH
T ss_conf 29997782289999998603899989965876378888998748832784177785446537869899879998471304
Q ss_pred CCEEECCCCCCC--CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 201211354210--000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 166 KWLFLNSPSNPS--GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 166 k~i~l~nP~NPT--G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
T Consensus 168 k~~vit---npTYdGv~~n~~~---i~~~~-~~~~a~v~~deah~~-~~~~~~~l~~~~~--~-~~~~~~tqS~HK~l-- 234 (557)
T COG1982 168 KLAVIT---NPTYDGVCYNLRK---IVELL-HHYGAWVLYDEAHPA-HFDFSPMLPESAL--N-GGADFVTQSTHKLL-- 234 (557)
T ss_pred HEEEEE---CCCCCEEEECHHH---HHHHH-HHCCCEEEHHHCCCC-CCCCCCCCCCHHH--H-CCCEEEEEEHHHHH--
T ss_conf 068896---4853247605999---99997-531866888645774-3355555741145--4-57438981054421--
Q ss_pred CCCCCC-CCCCH
Q ss_conf 445444-22110
Q gi|254780602|r 244 TGLRIG-YAAGA 254 (400)
Q Consensus 244 ~G~RiG-~~v~~ 254 (400)
T Consensus 235 ~alSQaS~iHv~ 246 (557)
T COG1982 235 AALSQASMIHVK 246 (557)
T ss_pred HHHHHHHHHHHC
T ss_conf 234366787508