HHsearch alignment for GI: 254780602 and conserved domain: COG3977
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism].
Probab=100.00 E-value=5.4e-42 Score=275.85 Aligned_cols=359 Identities=21% Similarity=0.356 Sum_probs=271.5
Q ss_pred HHHHHHHHHHH-HHHCCCCEEECCCCCCCCCCCHHHHH----HHHHHHHCCC-----CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89999999999-99869972665658974988999999----9999983887-----56998778989999999986421
Q gi|254780602|r 15 ATLVAAQRVRD-LRSKGIDVLCLTAGEPDFDMPENVKY----AVVRAMERGE-----TKYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 15 ~~~~~~~~~~~-~~~~g~~ii~l~~G~p~~~~p~~i~~----a~~~al~~~~-----~~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
T Consensus 15 Gi~~lMdDl~d~Lrt~g--~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ 90 (417)
T COG3977 15 GITQLMDDLNDGLRTPG--AIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRRE 90 (417)
T ss_pred HHHHHHHHHHHHCCCCC--CEEECCCCCCC-C-HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 09999998876515887--15656998543-7-34999999999999855607778754899764169999999999897
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCC--CCCCC-CCCCCCCCCCCCC----CCCCCCCCCCCCCCC--CCC
Q ss_conf 0133332233233454333322222223---3223--22223-3332322222222----222222222222232--221
Q gi|254780602|r 85 NDLHYTSDQIIVGTGAKHVIFNALMATV---NMGD--EVLIP-RPYWVSYPDMVAL----CGGIPVFVDTQQDDN--FQV 152 (400)
Q Consensus 85 ~g~~~~~e~I~it~G~~~~l~~~~~~~~---~~Gd--~Vlv~-~P~y~~y~~~~~~----~g~~~~~v~~~~~~~--~~~ 152 (400)
T Consensus 91 yGwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~-iel~~~g~FKY~v 169 (417)
T COG3977 91 YGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPN-IELLPAGQFKYHV 169 (417)
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCEEECCCC-CCCCCCCCEEECC
T ss_conf 578766441563278611588998875476679851046643683432655446572123552687-5326666622137
Q ss_pred HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCE
Q ss_conf 033310001221220121135421000012333321112233333201110122110000012233222--111233322
Q gi|254780602|r 153 SPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV--NVEPSLYER 230 (400)
Q Consensus 153 d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~--~~~~~~~~~ 230 (400)
T Consensus 170 DF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldal-A~~~giPliIDnAYg------~PFP~iifsd~~~~w~~N 240 (417)
T COG3977 170 DFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDAL-ARQHGIPLIIDNAYG------VPFPGIIFSDATPLWNEN 240 (417)
T ss_pred CHHHHC--CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHCCCCEEEECCCC------CCCCCEECCCCCCCCCCC
T ss_conf 788813--36760269964788988773648899989987-422389679735667------997862003564156787
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCC-CCCCCCCCCCCCCHHH
Q ss_conf 5741465443223445444221101226875310012223322222222222234676--432-2222211000000024
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ--DFV-VNNRKIFEYRRDLCVA 307 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~-~~~~~~~~~~r~~~~~ 307 (400)
T Consensus 241 iilC~SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aiaa~mie~gdl~rlseqVIrPFY~~~~q~~~~ 319 (417)
T COG3977 241 IILCMSLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIA 319 (417)
T ss_pred EEEEEEHHHC-CCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7888314334-898730357962699999997114535316787568999988602428889998643888988999999
Q ss_pred HHHC-CCC--CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--C-------CEEE
Q ss_conf 5530-477--60330274089986264102332113322489899999999873979983502289--9-------7289
Q gi|254780602|r 308 QLQG-VPG--IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--G-------PSIR 375 (400)
Q Consensus 308 ~L~~-~~g--~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~-------~~iR 375 (400)
T Consensus 320 ~l~~~lp~~~~~iHkpEGAIFlWLWf~dL----------PItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~R 388 (417)
T COG3977 320 ILRRYLPEYRCLIHKPEGAIFLWLWFKDL----------PITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMR 388 (417)
T ss_pred HHHHHCCCCCEEEECCCCCEEEHHHHCCC----------CCCHHHHHHHH-HHCEEEEECCCCCCCCCCCCCCCCCCEEE
T ss_conf 99986577652542687515413355358----------76689999999-86868994463247899988876122478
Q ss_pred EEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 996299999999999999999860
Q gi|254780602|r 376 ISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 376 is~~~~~e~l~~al~rl~~~l~~l 399 (400)
T Consensus 389 mn~~~~~e~ie~Gva~lae~ve~~ 412 (417)
T COG3977 389 MNYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 753698799999999999999999