HHsearch alignment for GI: 254780602 and conserved domain: PRK05093

>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed.
Probab=99.64  E-value=4.3e-15  Score=111.99  Aligned_cols=339  Identities=15%  Similarity=0.144  Sum_probs=187.9

Q ss_pred             HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r   28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI  104 (400)
Q Consensus        28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l  104 (400)
T Consensus        37 ~dG~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~--~~~~~~~~~~~~lae~L~~~~----~~drv~f~~SGSEAv  110 (403)
T PRK05093         37 QQGREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNVFTNEPALRLAKKLVDAT----FAERVFFANSGAEAN  110 (403)
T ss_pred             CCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHCC----CCCEEEEECCHHHHH
T ss_conf             99799999550888503289979999999999875577--757414889999999986416----877599838677899


Q ss_pred             CCCCCCC-------CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC--CCHHHHHHCCCCCCCCCEEE
Q ss_conf             2222222-------3322-322223333232222222222222222----22222322--21033310001221220121
Q gi|254780602|r  105 FNALMAT-------VNMG-DEVLIPRPYWVSYPDMVALCGGIPVFV----DTQQDDNF--QVSPEKLEQAITPKTKWLFL  170 (400)
Q Consensus       105 ~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v----~~~~~~~~--~~d~~~l~~~i~~~~k~i~l  170 (400)
T Consensus       111 E~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~iaAvii  190 (403)
T PRK05093        111 EAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAALKAVIDDKTCAVVV  190 (403)
T ss_pred             HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHHHHCCCCCEEEEEE
T ss_conf             99999999999972899875477775886888368776258801102778999775655633688886033774479999


Q ss_pred             CCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf             135-4210000-123333211122333332011101221100000122332-2211123332257414654432234454
Q gi|254780602|r  171 NSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGLR  247 (400)
Q Consensus       171 ~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~R  247 (400)
T Consensus       191 -EPi~g~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PD-----iv--~~gKglg-gG~P  260 (403)
T PRK05093        191 -EPIQGEGGVIPATPEFLQGLRELC-DKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPD-----IL--TSAKALG-GGFP  260 (403)
T ss_pred             -ECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC-----EE--EECCCCC-CCCC
T ss_conf             -576678997589999999999863-016837986013426887777522236898998-----89--9730015-8864


Q ss_pred             CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECCCC
Q ss_conf             44221101226875310012223322222222222234676432222221100000002455304----77603302740
Q gi|254780602|r  248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPDGA  323 (400)
Q Consensus       248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~g~  323 (400)
T Consensus       261 lsav~~~~~i~~~~~~~~~g~T~~g~pla~aaala~L~~i~~--~~l~~~a~~~G~~l~~~L~~l~~~~~~i~~VRG~G-  337 (403)
T PRK05093        261 IGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINT--PEVLEGVKAREQRFVDGLQKINEKYGVFSEIRGKG-  337 (403)
T ss_pred             EEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC-
T ss_conf             279987288786507877265898589999999999999963--44999999999999999999986289826665412-


Q ss_pred             EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf             899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r  324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL  399 (400)
Q Consensus       324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l  399 (400)
T Consensus       338 lm~giel~~~~---------~~~a~~i~~~~~-~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~eV  401 (403)
T PRK05093        338 LLIGAELNEQY---------KGRARDFLYAAA-EEGVMVLVAG----PDVLRFAPSLVIPDADIDEGLARFEKAVAKV  401 (403)
T ss_pred             EEEEEEECCCC---------CHHHHHHHHHHH-HCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             69999965875---------216999999999-6892895279----9979997884489999999999999999998