HHsearch alignment for GI: 254780602 and conserved domain: PRK05639

>PRK05639 4-aminobutyrate aminotransferase; Provisional.
Probab=99.32  E-value=7e-11  Score=86.32  Aligned_cols=343  Identities=15%  Similarity=0.137  Sum_probs=169.4

Q ss_pred             CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r   29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF  105 (400)
Q Consensus        29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~  105 (400)
T Consensus        51 dG~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~~~~~~-~~~~~~~~~lae~L~~~~P--~~~~~v~f~~sGSEAvE  127 (457)
T PRK05639         51 DGNVFIDFLAGAAAASTGYSHPKLVKAVKEQVELIQHSMIG-YTHSERAIRVAEKLVKISP--IKNSKVIFGLSGSDAVD  127 (457)
T ss_pred             CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf             96988880541886676179699999999998644476577-7488799999999997589--88775998186589999


Q ss_pred             CCCCCC-CCCC-CCCCCCCCCCCCCCCC-CCCCC--------CC-----CCCCCCC--CCCCCCC----H--------HH
Q ss_conf             222222-3322-3222233332322222-22222--------22-----2222222--2232221----0--------33
Q gi|254780602|r  106 NALMAT-VNMG-DEVLIPRPYWVSYPDM-VALCG--------GI-----PVFVDTQ--QDDNFQV----S--------PE  155 (400)
Q Consensus       106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~-~~~~g--------~~-----~~~v~~~--~~~~~~~----d--------~~  155 (400)
T Consensus       128 ~AiKlAr~~t~r~~Iis~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~~~~~~~~~~~~~~~  207 (457)
T PRK05639        128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGINGYEEPNELINRVLD  207 (457)
T ss_pred             HHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             99999864259886999935779865140001468754456888889984781798633453356763378999999999


Q ss_pred             HHHCCCC------CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf             3100012------21220121135-42100001-2333321112233333201110122110000012233-22211123
Q gi|254780602|r  156 KLEQAIT------PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS  226 (400)
Q Consensus       156 ~l~~~i~------~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~  226 (400)
T Consensus       208 ~le~~i~~~~~~~~~iAavi-~EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD  285 (457)
T PRK05639        208 YLENYVFSHVVPPDEVAALF-AEPIQGDAGIVVPPENFFKELKKLL-NELGILLVMDEVQTGIGRTGKWFASEWFSVKPD  285 (457)
T ss_pred             HHHHHHHHHCCCCCCEEEEE-EECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
T ss_conf             99999986146889789999-8276688798628989988999999-763986873103227762565456643799999


Q ss_pred             CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf             3322574146544322344544422110122687531001222332222222222223467--64322222211000000
Q gi|254780602|r  227 LYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDL  304 (400)
Q Consensus       227 ~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~  304 (400)
T Consensus       286 -----ii~--~gKgl~-~G~plsav~~~~~i~~~~~g~~~-~T~~gnpla~Aaa~a~L~~i~~~~l~~~----a~~~g~~  352 (457)
T PRK05639        286 -----MII--FGKGVA-SGMGLSGVIGRKEIMDITSGSAL-LTPAANPVISAAAEATLEIIEEENLLKN----ALEVGNF  352 (457)
T ss_pred             -----EEE--ECCHHC-CCCCCEEEEECHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHH
T ss_conf             -----999--772210-79870799984887754057655-5788652999999999999996559999----9999999


Q ss_pred             HHHHHHCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf             02455304----77603302740899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r  305 CVAQLQGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y  378 (400)
Q Consensus       305 ~~~~L~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~  378 (400)
T Consensus       353 l~~~L~~L~~~~~~v~dVRG~-GL~~giel~~~~~~~~~-----~~~~~v~~~~-~~~Gll~~~~g~~--~nvirl~PPL  423 (457)
T PRK05639        353 IMKRLEEMKEVFEIIGDVRGK-GLMIGVEIVKENGRPDP-----EMTGKICWRA-FELGLILPSYGMF--GNVIRITPPL  423 (457)
T ss_pred             HHHHHHHHHHHCCCEEEECCC-CCEEEEEEECCCCCCCH-----HHHHHHHHHH-HHCCCEEECCCCC--CCEEEEECCE
T ss_conf             999999988638975655037-80999999437899899-----9999999999-9679688158999--9989997893


Q ss_pred             ECCHHHHHHHHHHHHHHHHH
Q ss_conf             29999999999999999986
Q gi|254780602|r  379 AVSDAILEEACVRIKRFCHS  398 (400)
Q Consensus       379 ~~~~e~l~~al~rl~~~l~~  398 (400)
T Consensus       424 ~it~~eid~~~~il~~al~e  443 (457)
T PRK05639        424 VLTKEVAEKGLEIIERAIKD  443 (457)
T ss_pred             ECCHHHHHHHHHHHHHHHHH
T ss_conf             16899999999999999999