HHsearch alignment for GI: 254780602 and conserved domain: PRK05965
>PRK05965 hypothetical protein; Provisional.
Probab=99.49 E-value=5.8e-13 Score=99.00 Aligned_cols=347 Identities=13% Similarity=0.123 Sum_probs=175.5
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-89999999999983887--569987789899999999864210133332233233454333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGE--TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
T Consensus 44 dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~--~~~la~~L~~~~p--~~l~~v~f~~SGSEA 119 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAKQMRKLPYATGYFHFGSEP--AIRLAAELAERAP--GSLNHVYFTLGGSDA 119 (459)
T ss_pred CCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH--HHHHHHHHHHHCC--CCCCEEEEECCHHHH
T ss_conf 999998868628865650597999999999997567735665668669--9999999998578--886879984867999
Q ss_pred CCCCCCC-------CCCCC-CCCCCCCCCCCCCCCC-CCCCCCC------------CCCCCC--CCCCCC--------CC
Q ss_conf 3222222-------23322-3222233332322222-2222222------------222222--222322--------21
Q gi|254780602|r 104 IFNALMA-------TVNMG-DEVLIPRPYWVSYPDM-VALCGGI------------PVFVDT--QQDDNF--------QV 152 (400)
Q Consensus 104 l~~~~~~-------~~~~G-d~Vlv~~P~y~~y~~~-~~~~g~~------------~~~v~~--~~~~~~--------~~ 152 (400)
T Consensus 120 vE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 199 (459)
T PRK05965 120 VDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAA 199 (459)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999997279987579997178589974310257774322356899998623578865568788977889999
Q ss_pred HHHHHHCCCC----CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 0333100012----21220121135-42100001-2333321112233333201110122110000012233-2221112
Q gi|254780602|r 153 SPEKLEQAIT----PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEP 225 (400)
Q Consensus 153 d~~~l~~~i~----~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~ 225 (400)
T Consensus 200 ~~~~l~~~i~~~~~~~vAAvi~-EPi~g~gG~~~pp~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~P 277 (459)
T PRK05965 200 SVAALEAKVAELGADNVAAFFC-EPIQGSGGVIVPPKGWLKAMREAC-RELGILFVADEVITGFGRTGPLFACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999998618875799995-464466885328768879999998-75691799830541776244741003666188
Q ss_pred CCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 33322574146544322344-54442211012268753100-------1222332222222222223467--64322222
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-------GQQTSGACSIAQWAAVEALNGP--QDFVVNNR 295 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~ 295 (400)
T Consensus 278 D-----iv--~~gKgL~-gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~~~~l~~~-- 347 (459)
T PRK05965 278 D-----LM--TVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLAN-- 347 (459)
T ss_pred C-----EE--EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH--
T ss_conf 8-----88--8734345-786751689764899987611566565445677899898999999999999986349999--
Q ss_pred CCCCCCCCCHHHHHHCC---CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 21100000002455304---776033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGV---PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~---~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
T Consensus 348 --~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm-~gielv~d~~~~~~~~~~~~~~~~i~~~-~~~~Glli~~~g----~~ 419 (459)
T PRK05965 348 --GQAAAPRFAAGLDALRAHPLVGDVRGRGLL-GALELVADKASKTPFDAALEPADRIFDR-AYANGLVFRAFG----DG 419 (459)
T ss_pred --HHHHHHHHHHHHHHHHCCCCEEEEEECCEE-EEEEEECCCCCCCCCCHHHHHHHHHHHH-HHHCCEEEEECC----CC
T ss_conf --999999999999987649976867825627-9999712654466775547999999999-996992998079----99
Q ss_pred EEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 28999--6299999999999999999860
Q gi|254780602|r 373 SIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 373 ~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
T Consensus 420 vl~l~PPL~It~~eid~~~~~l~~al~ev 448 (459)
T PRK05965 420 VLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89997882089999999999999999999