HHsearch alignment for GI: 254780602 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=99.71 E-value=9.1e-17 Score=122.17 Aligned_cols=233 Identities=17% Similarity=0.173 Sum_probs=144.7
Q ss_pred HHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999838875699877-898999999998642101333322332334543333222222233223222233332322222
Q gi|254780602|r 53 VVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM 131 (400)
Q Consensus 53 ~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~ 131 (400)
T Consensus 44 ~~~~~~~~~~g~~YsR~~NP-T~~~lE~~la~LEg----g~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l 118 (389)
T PRK05968 44 MEAVYAGETVRPIYTRGDNP-TVRAFEEMLAKLEG----AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRL 118 (389)
T ss_pred HHHHHCCCCCCCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH
T ss_conf 99874688679614289886-69999999999829----96388854889999999999608999898588766758999
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ----2222222222222222322210333100012212201211354210000123333211122333332011101221
Q gi|254780602|r 132 ----VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 132 ----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
T Consensus 119 ~~~~l~~~GI~v~~vd~-------~d~~~~~~~i-~~Tklv~~EtpsNP~l~v~D---I~~ia~i-A~~~g~~~vVDNTf 186 (389)
T PRK05968 119 FGTLLKRMGVEVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFELQD---IAALAAL-AKRHGVVTVIDNSW 186 (389)
T ss_pred HHHHHHCCCCEEEEECC-------CCHHHHHHCC-CCCCEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCC
T ss_conf 99888607846999689-------9999999627-68728999789998872738---9999999-99839959997786
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 100000122332221112333225741465443223445-4442211012268753100-12223322222222222234
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGALSLIKSMIVLQ-GQQTSGACSIAQWAAVEALN 285 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~~~li~~l~~~~-~~~~~~~~~~~q~a~~~~l~ 285 (400)
T Consensus 187 atP~~----~~Pl-~~--G---aDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~lG~~lsP~~a~l~lRGL~ 256 (389)
T PRK05968 187 ASPVF----QRPI-TL--G---VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGGKLSPFEAWLLLRGLR 256 (389)
T ss_pred CHHHH----CCHH-HH--C---CCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 11642----5842-40--7---9879970453446898844269945699999999999986277788588899984798
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 6764322222211000000024553047760
Q gi|254780602|r 286 GPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 286 ~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
T Consensus 257 T----L~lRm~rh~~nA~~vA~~L~~hp~V~ 283 (389)
T PRK05968 257 T----LPLRMKAHEASALLIARRLKAHPVVE 283 (389)
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6----99999999999999999996199986