HHsearch alignment for GI: 254780602 and conserved domain: PRK06541
>PRK06541 hypothetical protein; Provisional.
Probab=99.38 E-value=9.1e-12 Score=91.74 Aligned_cols=351 Identities=13% Similarity=0.115 Sum_probs=179.1
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
T Consensus 50 dG~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~-~~~~~~~~~~~~~lae~L~~~~p--~~l~~v~f~~SGsEA~E 126 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAF-FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf 9999999651487531178989999999999975787-56775578799999999997488--88698997087489999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCC-CCCCCC---C---------CCCCC------CCCCC----CC-CCH
Q ss_conf 2222223-------3223-222233332322222-222222---2---------22222------22223----22-210
Q gi|254780602|r 106 NALMATV-------NMGD-EVLIPRPYWVSYPDM-VALCGG---I---------PVFVD------TQQDD----NF-QVS 153 (400)
Q Consensus 106 ~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~~-~~~~g~---~---------~~~v~------~~~~~----~~-~~d 153 (400)
T Consensus 127 ~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999619998618999668716786578875188000378878899916768886445776789988999999
Q ss_pred HHHHHCCCCC----CCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3331000122----1220121135-42100001-2333321112233333201110122110000012233-22211123
Q gi|254780602|r 154 PEKLEQAITP----KTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~~----~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
T Consensus 207 ~~~~~~~i~~~~~~~iAavI~-EPi~g~gG~~~~~~~fl~~lr~lc-~~~gillI~DEVqtGfGRtG~~fa~e~~gv~PD 284 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFL-EPVQNAGGCFPPPPGYFERVREIC-DRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD 284 (460)
T ss_pred HHHHHHHHHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCEECCCCCCCCCHHCCCCCCCC
T ss_conf 999999998519985789984-577787886568689999999974-647953766751207865337322016894895
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf 3322574146544322344-54442211012268753100----1222332222222222223467--643222222110
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ----GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFE 299 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~ 299 (400)
T Consensus 285 -------iv~~gKglg-~G~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~avL~~i~~~~l~~----~v~ 352 (460)
T PRK06541 285 -------IITCAKGIT-SGYSPLGAMIASDRLVEPFLDGKTMFLHGYTFGGHPVSAAVALANLDIFEREGLLD----HVR 352 (460)
T ss_pred -------HHHHHHHCC-CCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHH
T ss_conf -------141223125-88777046740399987652688531357678889899999999999998657999----999
Q ss_pred CCCCCHHHHHHC---CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCC--HHHHHHHHHHHCCEEEECCCCCCCCCEE
Q ss_conf 000000245530---47760330274089986264102332113322489--8999999998739799835022899728
Q gi|254780602|r 300 YRRDLCVAQLQG---VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRT--DLDFVNGLLEIEKVAVVQGSSFGHGPSI 374 (400)
Q Consensus 300 ~~r~~~~~~L~~---~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ll~~~gV~v~pG~~Fg~~~~i 374 (400)
T Consensus 353 ~~G~~l~~~L~~l~~~p~v~dVRG~-GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~~--~~vi 429 (460)
T PRK06541 353 DNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRG--DPVV 429 (460)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC--CCEE
T ss_conf 9999999999997469977874107-738999954576545667646778999999999999789599745899--9889
Q ss_pred EEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 999--6299999999999999999860
Q gi|254780602|r 375 RIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 375 Ris--~~~~~e~l~~al~rl~~~l~~l 399 (400)
T Consensus 430 rl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 430 QLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred EEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 997893378999999999999999999