HHsearch alignment for GI: 254780602 and conserved domain: PRK07865
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed.
Probab=100.00 E-value=0 Score=563.56 Aligned_cols=357 Identities=22% Similarity=0.301 Sum_probs=312.8
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 89873897589999999999998699726656589749889999999999983887569987789899999999864210
Q gi|254780602|r 6 NILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDN 85 (400)
Q Consensus 6 ~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~ 85 (400)
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vI~l~iG~Pd~p~P~~v~~a~~~a~--~~~~Y~~~~G~~~LReAIa~~~~~~~ 79 (364)
T PRK07865 2 PVSASLPDFPWDTLAPAKARAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAA--DAPGYPTTAGTPELREAIVAWLARRY 79 (364)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7511289985999999999998789983985698998998999999999624--89998998887999999999999983
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 133-33223323345433332222222-3322322223333232222222222222222222223222103331000122
Q gi|254780602|r 86 DLH-YTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 86 g~~-~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
T Consensus 80 g~~~~~~~~V~vt~Ga~~~l~~l~~~l~~~pGD~Vlip~P~Yp~y~~~~~~~g~~~v~~d------------~~~~~~~~ 147 (364)
T PRK07865 80 GVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVVPELAYPTYEVGARLAGATVVRAD------------SLTELGPQ 147 (364)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCEEEECC------------CHHHCCCC
T ss_conf 989899687997698899999999997079999899866786019999998198656107------------88775987
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC--CCCCCCCEEEEECCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221--1123332257414654432
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVN--VEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~--~~~~~~~~~i~~~S~SK~~ 241 (400)
T Consensus 148 ~~~li~lnsP~NPTG~v~s~e~l~~l~~la-~~~~i~vi~DE~Y~~l~~~~~~~-s~l~p~~~~~~~~~vi~i~S~SK~~ 225 (364)
T PRK07865 148 TPALIWLNSPSNPTGRVLGVDHLRKVVAWA-RERGAVVASDECYLGLGWDAEPV-SVLDPRVCGGDHTGLLAVHSLSKQS 225 (364)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCEEEEEECCCHHHHCCCCCCC-CCCCHHHCCCCCCCEEEEECCCCCC
T ss_conf 752999899969855117699999999997-76718998254257642589886-5138644277757579994365230
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 23445444221101226875310012223322222222222234676432222221100000002455304776033027
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
T Consensus 226 ~~~GlRiG~i~~~~~li~~l~~~~~~~~~~~~~~~Q~a~~aal~~-~~~~~~~~~~y~~rr~~l~~~L~~~-g~~~~~p~ 303 (364)
T PRK07865 226 NLAGYRAGFVAGDPALVAELLAVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLLPALEAA-GFTVDHSE 303 (364)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 677744899967999999999999855023789999999999579-3999999999999999999999867-97662699
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 40899862641023321133224898999999998739799835022899--72899962999999999999999
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~~ 394 (400)
T Consensus 304 G~fylw~~~~-------------~~~~~~~~~l-~e~gV~v~PG~~Fg~~g~~~vRls~~~~~e~l~ea~~RLaA 364 (364)
T PRK07865 304 AGLYLWATRG-------------EDCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLTA 364 (364)
T ss_pred CEEEEEEECC-------------CCHHHHHHHH-HHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_conf 2279988889-------------9999999999-97998991887436899986999965989999999998683