HHsearch alignment for GI: 254780602 and conserved domain: PRK08912

>PRK08912 hypothetical protein; Provisional.
Probab=100.00  E-value=0  Score=641.38  Aligned_cols=381  Identities=26%  Similarity=0.438  Sum_probs=353.4

Q ss_pred             CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r    1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK   80 (400)
Q Consensus         1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~   80 (400)
T Consensus         1 m~~~n~~~~~~~~~~~~~~~~la~-----~~~~I~L~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~   75 (387)
T PRK08912          1 MKSLNPVFADLPTTIFEVMSQLAR-----EHGAINLGQGFPDDPGPEDVRRAAADALLDGYNQYPPMMGLPELRQAVAAH   75 (387)
T ss_pred             CCCCCCCHHHCCCCHHHHHHHHHC-----CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             977561354479989999999863-----799277369789999889999999999852999898998729999999999


Q ss_pred             HHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             642101333322-3323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r   81 FRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ  159 (400)
Q Consensus        81 ~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  159 (400)
T Consensus        76 ~~~~~g~~~~p~~~V~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~  154 (387)
T PRK08912         76 YARFHGLDLDPMTEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDSYLPIIRRAGGVPRLVRLEPP-HWRLPEAALAA  154 (387)
T ss_pred             HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCC-CCCCCHHHHHH
T ss_conf             99986899898872998766899999999996699898999488081179999972988997565587-77889999985


Q ss_pred             CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r  160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK  239 (400)
Q Consensus       160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK  239 (400)
T Consensus       155 ~~~~~tk~iil~~P~NPTG~v~s~e~l~~l~~~a-~~~~i~vi~DEiY~~l~~~~~~~~~~~~~-~~~~~~~i~i~S~SK  232 (387)
T PRK08912        155 AFSPRTKAVLLNNPLNPAGKVFPREDLALLAEFC-QRHDAVAICDEVWEHVVFDGRRHIPLMAL-PGMRERTVKIGSAGK  232 (387)
T ss_pred             CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHEEECCCCCCHHHCC-CCCCCCEEEECCCCC
T ss_conf             2788866999899989888568699999999988-65797998026523315678654044406-676673699856777


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf             32234454442211012268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r  240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI  319 (400)
Q Consensus       240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~  319 (400)
T Consensus       233 ~~~m~G~RiG~~~~~~~li~~l~~~~~~~~~~~~~~~Q~a~a~~l~~~~~~~~~~~~~~~~rr~~l~~~L~~~-g~~~~~  311 (387)
T PRK08912        233 IFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQRAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLP  311 (387)
T ss_pred             EECCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC
T ss_conf             5205533279998399999999999875855766999999999973877999999999999999999999976-985627


Q ss_pred             CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf             274089986264102332113322489899999999873979983502289----9728999629999999999999999
Q gi|254780602|r  320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKRF  395 (400)
Q Consensus       320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~~  395 (400)
T Consensus       312 ~~G~~~~~~~~~~~~--------~~~~~~~f~~~ll~e~gV~~vPG~~F~~~~~~~~~iRlsfa~~~e~l~ea~~RL~~~  383 (387)
T PRK08912        312 SQGTYFLTVDLAPLG--------LAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAA  383 (387)
T ss_pred             CCCEEEEEEECCCCC--------CCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             981589988514558--------998999999999996899998150128999999859999799999999999999999


Q ss_pred             HHH
Q ss_conf             986
Q gi|254780602|r  396 CHS  398 (400)
Q Consensus       396 l~~  398 (400)
T Consensus       384 lk~  386 (387)
T PRK08912        384 FRG  386 (387)
T ss_pred             HHC
T ss_conf             836