HHsearch alignment for GI: 254780602 and conserved domain: PRK08960

Probab=100.00  E-value=0  Score=656.06  Aligned_cols=382  Identities=29%  Similarity=0.441  Sum_probs=354.2

Q ss_pred             CHH-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf             936-7889873897589999999999998699726656589749889999999999983887569987789899999999
Q gi|254780602|r    1 MVF-ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE   79 (400)
Q Consensus         1 m~~-~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~   79 (400)
T Consensus         1 m~~~~s~r~~~i~~s~~~~i~~~a~~~~~~G~~vi~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~   80 (387)
T PRK08960          1 MAQRYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAG   80 (387)
T ss_pred             CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf             97178899844996799999999999997799807889948999889999999999985389988998772999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf             86421013333223323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r   80 KFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ  159 (400)
Q Consensus        80 ~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~  159 (400)
T Consensus        81 ~~~~~~g~~~~~d~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~~~~~~~~~~~~vp~~~~~~~~~~~~~le~  160 (387)
T PRK08960         81 FYAQRYGLDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDTRYQLTPALVER  160 (387)
T ss_pred             HHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf             99998589998432898086699999999995699987998178765528999985374499975754477889999997


Q ss_pred             CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf             01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r  160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK  239 (400)
Q Consensus       160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK  239 (400)
T Consensus       161 ~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~~a-~~~~~~vI~DEiY~~l~~~~~~-~s~~~~----~~~~i~i~S~SK  234 (387)
T PRK08960        161 HWDSDSVGALVASPANPTGTLLSRDELAALSQAL-KARGGHLVVDEIYHGLTYGVDA-ASVLEV----DDSAFVLNSFSK  234 (387)
T ss_pred             HCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCHHHCCCCCC-CCCCCC----CCCEEEEEECCC
T ss_conf             2787872999768989886314689999999987-6239779984461441258986-531136----787799950643


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf             322344544422110122687531001222332222222222223467-6432222221100000002455304776033
Q gi|254780602|r  240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM  318 (400)
Q Consensus       240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~  318 (400)
T Consensus       235 ~~~~~G~RiG~~v~p~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~  314 (387)
T PRK08960        235 YFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASSMAQHAALACFEPETIAILEARRAEFQRRRDFLLPALRELGFGIAV  314 (387)
T ss_pred             CCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             25577630589998899999999999854377987999999999621559999999999999999999999975996045


Q ss_pred             ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf             0274089986264102332113322489899999999873979983502289---9728999629999999999999999
Q gi|254780602|r  319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---GPSIRISYAVSDAILEEACVRIKRF  395 (400)
Q Consensus       319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---~~~iRis~~~~~e~l~~al~rl~~~  395 (400)
T Consensus       315 ~P~G~~y~w~~~~~~----------~~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~~~~~l~eal~RL~~~  384 (387)
T PRK08960        315 EPQGAFYLYADISAF----------GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQSLPRLQEAVERIARG  384 (387)
T ss_pred             CCCEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             898666997888888----------9999999999998699999747220899999989999769999999999999999


Q ss_pred             HHH
Q ss_conf             986
Q gi|254780602|r  396 CHS  398 (400)
Q Consensus       396 l~~  398 (400)
T Consensus       385 Lks  387 (387)
T PRK08960        385 LRS  387 (387)
T ss_pred             HCC
T ss_conf             667