HHsearch alignment for GI: 254780602 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=100.00 E-value=0 Score=601.96 Aligned_cols=370 Identities=26% Similarity=0.450 Sum_probs=329.1
Q ss_pred HHHHHHHHHHHCCCCEEECCCCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 999999999986997266565897---49889999999999983887569987789899999999864210133332233
Q gi|254780602|r 18 VAAQRVRDLRSKGIDVLCLTAGEP---DFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQI 94 (400)
Q Consensus 18 ~~~~~~~~~~~~g~~ii~l~~G~p---~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I 94 (400)
T Consensus 133 p~~~~a~~~e~~g~~i~klnignpa~fgf~~p~~~~~~~~~~~~~-~~gy~~s~g~~~ar~a~~~~~q~~~~~~~~~~di 211 (518)
T PRK13355 133 PVADEAMRMEANGTHILKLNIGNPAPFGFRTPDEVVYDMAHQLPD-TEGYSPSKGLFSARKAIMQYAQLKNIPNVDIDDI 211 (518)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHE
T ss_conf 899999999974881676347898866888948999999973723-4587545575689999999999769999874035
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCC
Q ss_conf 23345433332222222332232222333323222222222222222222222322210333100012212201211354
Q gi|254780602|r 95 IVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPS 174 (400)
Q Consensus 95 ~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~ 174 (400)
T Consensus 212 ~~gnGvSE~i~~am~Alln~GDeVLiP~P~YPlyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVInNPN 291 (518)
T PRK13355 212 YTGNGVSELINLSMSALLDDGDEVLVPSPDYPLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVIINPN 291 (518)
T ss_pred EECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCC
T ss_conf 65477679999999983689998982599997789998860987889874522177889999985357155799996898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-
Q ss_conf 2100001233332111223333320111012211000001223322211123332257414654432234454442211-
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG- 253 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~- 253 (400)
T Consensus 292 NPTGAVyS~E~LeeIaeiA-rehdLiIISDEIY~~LvYDg~~h~Siasla~d~--~~It~NG~SKsyaMtGWRiGwmv~s 368 (518)
T PRK13355 292 NPTGALYPKEVLQQIVDIA-REHQLIIFSDEIYDRLVMDGLEHTSIASLAPDL--FCVTFSGLSKSHMIAGFRAGWMMLS 368 (518)
T ss_pred CCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCC--EEEEECCCCCCEECCEEEEEEEEEC
T ss_conf 9888788999999999999-985969996230221006898630476708864--5999887766633220113665424
Q ss_pred -HH----HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEE
Q ss_conf -01----226875310012223322222222222234676---4322222211000000024553047760330274089
Q gi|254780602|r 254 -AL----SLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ---DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFY 325 (400)
Q Consensus 254 -~~----~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y 325 (400)
T Consensus 369 G~~~~a~~~Ie~l~~Las-~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~-rl~erRdlv~e~Ln~IpGvscvkP~GAFY 446 (518)
T PRK13355 369 GNKRHAKDYIEGLNMLAN-MRMCSNVPAQSVVQTALGGHQSVKDYTVPGG-RLYDQRELVYDMLNAIPGISAVKPKAAFY 446 (518)
T ss_pred CCHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH-HHHHHHHHHHHHHHCCCCCEECCCCEEEE
T ss_conf 858999999999999860-4566368999999998628764899999999-99999999999983599976589981589
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 98626410233211332248989999999987397998350228--9972899962999999999999999998609
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
T Consensus 447 lFPkID~~-------~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~~pghfRIsyaps~e~L~EA~~RI~~FL~~yr 516 (518)
T PRK13355 447 IFPKIDVK-------IFNIHSDEQFALDLLHEKHILISHGGAFNWDKPDHFRVVYLPRLGMLEETMDELDDFFSYYR 516 (518)
T ss_pred EEEECCCC-------CCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 95541534-------48998999999999985899995875448999897999927999999999999999999865