HHsearch alignment for GI: 254780602 and conserved domain: TIGR00700

>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=98.67  E-value=6.2e-08  Score=68.36  Aligned_cols=346  Identities=15%  Similarity=0.147  Sum_probs=184.3

Q ss_pred             CCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             699726656589--749-8899999999999838-875699877898999999998642101333322332334543333
Q gi|254780602|r   29 KGIDVLCLTAGE--PDF-DMPENVKYAVVRAMER-GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI  104 (400)
Q Consensus        29 ~g~~ii~l~~G~--p~~-~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l  104 (400)
T Consensus        31 dGnr~IDfa~gIavln~GhshP~vV~AV~~Q~~ef~Ht~f~v~p-Ye~Yv-~lAEkln~iaPgSg~kk~~ffnsGA-EAV  107 (427)
T TIGR00700        31 DGNRYIDFAAGIAVLNVGHSHPKVVEAVKRQVEEFTHTAFQVVP-YESYV-ELAEKLNAIAPGSGEKKAVFFNSGA-EAV  107 (427)
T ss_pred             CCCEEEHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEC-CHHHH-HHHHHHCCCCCCCCCHHEEEECCCH-HHH
T ss_conf             77521000110232036898735899999999974388534521-62589-9999971578897310002111543-788


Q ss_pred             CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCC---------CCCCC-CHHHHH
Q ss_conf             2222---22233223222233332322222222222--------------222222222---------23222-103331
Q gi|254780602|r  105 FNAL---MATVNMGDEVLIPRPYWVSYPDMVALCGG--------------IPVFVDTQQ---------DDNFQ-VSPEKL  157 (400)
Q Consensus       105 ~~~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~--------------~~~~v~~~~---------~~~~~-~d~~~l  157 (400)
T Consensus       108 ENAVKIAR~yTgr-pgVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~~~~~~~q~s~d~m~~~A~  186 (427)
T TIGR00700       108 ENAVKIARKYTGR-PGVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYRDIALDKQESLDDMVLAAI  186 (427)
T ss_pred             HHHHHHHHHHCCC-CCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             8899999874589-616863687466126788765227873457888674521168872002433442222003899999


Q ss_pred             HCC------CCCCCCCEEECCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf             000------1221220121135-421000012-3333211122333332011101221100000122----332221112
Q gi|254780602|r  158 EQA------ITPKTKWLFLNSP-SNPSGVVYS-QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ----FSNIVNVEP  225 (400)
Q Consensus       158 ~~~------i~~~~k~i~l~nP-~NPTG~v~s-~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~----~~s~~~~~~  225 (400)
T Consensus       187 ~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C-~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~P  265 (427)
T TIGR00700       187 EALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLC-KEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKP  265 (427)
T ss_pred             HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCC
T ss_conf             98312103325010437897322478873338588999999975-43875899725456800002112541006788875


Q ss_pred             CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf             3332257414654432234454442211012268753100122233222222222222346--76432222221100000
Q gi|254780602|r  226 SLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRD  303 (400)
Q Consensus       226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~  303 (400)
T Consensus       266 D-----L--it~aKslA-~GlPLSgV~GrAeimdApapGgLGGTyaGnPlacAAAlAvl~iIe~egL~ERa~qig~~~~d  337 (427)
T TIGR00700       266 D-----L--ITVAKSLA-DGLPLSGVVGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLDIIEEEGLIERAEQIGKLVKD  337 (427)
T ss_pred             C-----H--HHHHHHHH-CCCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf             1-----8--87866773-56862111044121168888888775568879999999999863113124789998788988


Q ss_pred             CHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf             002455304776033027408998626410233211332248989999999---98739799835022899728999--6
Q gi|254780602|r  304 LCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGL---LEIEKVAVVQGSSFGHGPSIRIS--Y  378 (400)
Q Consensus       304 ~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---l~~~gV~v~pG~~Fg~~~~iRis--~  378 (400)
T Consensus       338 ~l~~~k~~~p~IgdvRglGaMiA-vE~vkdp~T-------~EPda~~a~~ia~~A~a~GlllLTcG~~G--NiIRfL~PL  407 (427)
T TIGR00700       338 KLIELKEEVPAIGDVRGLGAMIA-VELVKDPDT-------TEPDAALAEKIAAAALAAGLLLLTCGIYG--NIIRFLTPL  407 (427)
T ss_pred             HHHHHHHHCCCHHHHHCCCCEEE-EEEECCCCC-------CCCCHHHHHHHHHHHHHCCHHHHHCCHHC--CHHHHCCCC
T ss_conf             88888760672111202633578-886548878-------88317999999999975682212303011--555434886


Q ss_pred             ECCHHHHHHHHHHHHHHHH
Q ss_conf             2999999999999999998
Q gi|254780602|r  379 AVSDAILEEACVRIKRFCH  397 (400)
Q Consensus       379 ~~~~e~l~~al~rl~~~l~  397 (400)
T Consensus       408 tI~D~ll~egl~Il~a~L~  426 (427)
T TIGR00700       408 TISDELLDEGLDILEAALA  426 (427)
T ss_pred             CCCHHHHHHHHHHHHHHHC
T ss_conf             5467889889999999852