HHsearch alignment for GI: 254780602 and conserved domain: TIGR01328
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.40 E-value=2.5e-13 Score=101.21 Aligned_cols=202 Identities=18% Similarity=0.288 Sum_probs=139.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 223323345433332222222332232222333323222----2222222222222222223222103331000122122
Q gi|254780602|r 91 SDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP----DMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 91 ~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
T Consensus 74 ~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~~~~-------~pee~~a~i~dnT~ 146 (392)
T TIGR01328 74 AEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVKFVDMA-------SPEEVKAAIKDNTK 146 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCC-------CHHHHHHHCCCCCE
T ss_conf 46778875128999999999985287577438742014899873267737527983178-------77999984489977
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC-
Q ss_conf 0121135421000012333321112233333201110122110000012233222111233322574146544322344-
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG- 245 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G- 245 (400)
T Consensus 147 ivYfETPaNPtm~liD~e---~v~r~A~~~gG~kVivDNTfatP~l-----t~P~al-----G~D~VVHSATKYigGHgD 213 (392)
T TIGR01328 147 IVYFETPANPTMKLIDLE---LVVRVAHEKGGVKVIVDNTFATPYL-----TRPVAL-----GVDVVVHSATKYIGGHGD 213 (392)
T ss_pred EEEEECCCCCCHHHHHHH---HHHHHHHHCCCEEEEEECCCCCHHH-----CCHHHC-----CCCEEEECCCCCCCCCHH
T ss_conf 999865998752577599---9999997529828998566277001-----380361-----877689424121376122
Q ss_pred CCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 5444221101226875310--0122233222222222222346764322222211000000024553047760
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVL--QGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
T Consensus 214 vVaG~~~G~~e~~q~iR~~g~KD~tG~ViSPfdAwL~lRGLkT----L~~RM~rhsenA~kvAe~Lk~HPaVe 282 (392)
T TIGR01328 214 VVAGVLIGDAELLQRIRLVGVKDMTGAVISPFDAWLVLRGLKT----LAVRMKRHSENAEKVAEYLKEHPAVE 282 (392)
T ss_pred HHHHHHCCCHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 1122110775667440111100056650055789999743667----77888773053899999852388602