HHsearch alignment for GI: 254780602 and conserved domain: TIGR01885
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.72 E-value=4.5e-08 Score=69.24 Aligned_cols=337 Identities=15% Similarity=0.142 Sum_probs=181.0
Q ss_pred CCCCEEECCCCCCCCC---CCHHHHHHHHHHHHC-CCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897498---899999999999838-875---699877898999999998642101333322332334543
Q gi|254780602|r 29 KGIDVLCLTAGEPDFD---MPENVKYAVVRAMER-GET---KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 29 ~g~~ii~l~~G~p~~~---~p~~i~~a~~~al~~-~~~---~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
T Consensus 40 eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~nd~lg------~~~~~~t~LfgGk--~~~vL~mNTGa 111 (426)
T TIGR01885 40 EGREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFHNDVLG------EFAKYLTKLFGGK--YEKVLPMNTGA 111 (426)
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHH------HHHHHHHHHCCCC--CCEEECCCCCH
T ss_conf 888864100255440137677168999999985137102766060357------8999999754995--10560456873
Q ss_pred CCCCCCCCCC-----CC---CCC--CCCCCCCCCCC-CCCCC---CCC-CCCCCCCCCCC----CCCCCC----HHHHHH
Q ss_conf 3332222222-----33---223--22223333232-22222---222-22222222222----232221----033310
Q gi|254780602|r 102 HVIFNALMAT-----VN---MGD--EVLIPRPYWVS-YPDMV---ALC-GGIPVFVDTQQ----DDNFQV----SPEKLE 158 (400)
Q Consensus 102 ~~l~~~~~~~-----~~---~Gd--~Vlv~~P~y~~-y~~~~---~~~-g~~~~~v~~~~----~~~~~~----d~~~l~ 158 (400)
T Consensus 112 EAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~ 191 (426)
T TIGR01885 112 EAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALR 191 (426)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 47999999999744135785576238998538873303544320267212006787967743357852115588878999
Q ss_pred CCCC-C-----CCCCEEECCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCC--CCCCC
Q ss_conf 0012-2-----1220121135-42100001233-3321112233333201110122110000012233-2221--11233
Q gi|254780602|r 159 QAIT-P-----KTKWLFLNSP-SNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVN--VEPSL 227 (400)
Q Consensus 159 ~~i~-~-----~~k~i~l~nP-~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~--~~~~~ 227 (400)
T Consensus 192 ~aL~~P~~~GDnVAA~i~-EPIQGEAGvvvPp~gYl~~V~~LC-~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PD- 268 (426)
T TIGR01885 192 KALQDPKKTGDNVAAFIL-EPIQGEAGVVVPPPGYLPGVRALC-KEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPD- 268 (426)
T ss_pred HHHHCCCCCCCCEEEEEE-CCCCCCCCEEECCCCHHHHHHHHH-HHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCC-
T ss_conf 997275778886899995-040354436848963578999986-55187289820003840254533101058820450-
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 3225741465443223445444221101226875310--01222332222222222223467643222222110000000
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVL--QGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLC 305 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~ 305 (400)
T Consensus 269 ----i~l--LGKALsGGv~PiSa~la~~dim~vl~PGPF~HGSTfGGNPLAcavaiAaLeVL~~--ekL~~~A~~lG~~f 340 (426)
T TIGR01885 269 ----IVL--LGKALSGGVYPISAVLADDDIMSVLKPGPFEHGSTFGGNPLACAVAIAALEVLEE--EKLAERADQLGDMF 340 (426)
T ss_pred ----CEE--EEHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
T ss_conf ----335--1123458946224366646401211764865677688757899999999998740--45068898832899
Q ss_pred HHHHHCCC----CCEEEECCC-CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 24553047----760330274-0899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 306 VAQLQGVP----GIRYMIPDG-AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 306 ~~~L~~~~----g~~~~~p~g-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
T Consensus 341 ~~~L~~l~~~S~dv-v~EVRGkGLL~AIe~~~~k-------a~~~~~w~~Cl~~-k~~GLlak~~n---hd~~IR~aPPL 408 (426)
T TIGR01885 341 LDELKQLARESPDV-VKEVRGKGLLIAIEFKENK-------ADEIGAWDVCLRL-KENGLLAKPTN---HDKIIRLAPPL 408 (426)
T ss_pred HHHHHHHHHHCCCC-EEHHCCCCCEEEEEEECCC-------CCCCCHHHHHHHH-HCCCCEECCCC---CCCEEEECCCC
T ss_conf 99999887507640-0011567216888850653-------3326466887885-20742101335---87068717885
Q ss_pred ECCHHHHHHHHHHHHHHH
Q ss_conf 299999999999999999
Q gi|254780602|r 379 AVSDAILEEACVRIKRFC 396 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l 396 (400)
T Consensus 409 ~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 409 VITKEQLDEVIEIIRKTL 426 (426)
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 263899999999986049