HHsearch alignment for GI: 254780602 and conserved domain: TIGR02006

>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=98.15  E-value=5.8e-07  Score=62.44  Aligned_cols=320  Identities=17%  Similarity=0.186  Sum_probs=164.1

Q ss_pred             CCCCHHHHHHHHHHHH-CCCCCCCC----------CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             9889999999999983-88756998----------778989999999986421013333223323345433332222222
Q gi|254780602|r   43 FDMPENVKYAVVRAME-RGETKYTA----------VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT  111 (400)
Q Consensus        43 ~~~p~~i~~a~~~al~-~~~~~Y~~----------~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~  111 (400)
T Consensus        13 ~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~------~~d~~ei~ftsGate~~nl~i~G~   86 (404)
T TIGR02006        13 TPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELI------GADSREIVFTSGATESDNLAIKGV   86 (404)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             86458999999998874156688642343345306889999999999984------588740787237753024788889


Q ss_pred             C----CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf             3----3223222233332322222---22222222222222223222103331000122122012113542100001233
Q gi|254780602|r  112 V----NMGDEVLIPRPYWVSYPDM---VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQN  184 (400)
Q Consensus       112 ~----~~Gd~Vlv~~P~y~~y~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~  184 (400)
T Consensus        87 a~fy~~k~~h~it~~~ehk~vl~~~r~le~~G~~vtyl~~~~~G--~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~--  162 (404)
T TIGR02006        87 AKFYKSKGKHIITSKTEHKAVLDTCRELEREGFEVTYLEVKEDG--LIDLEELKAAIRDDTILVSVMAVNNEIGVIQD--  162 (404)
T ss_pred             HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCC--CEEHHHHHHHHHCCEEEEEEEEECCCCCHHHH--
T ss_conf             99974237667864003678999999887578168985014566--21089999874127057875531144330465--


Q ss_pred             CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE--CCCCCCCCCCCCCCCCCCCHHH--H-HH
Q ss_conf             33211122333332011101221100000122332221112333225741--4654432234454442211012--2-68
Q gi|254780602|r  185 RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVV--NGVSKAYAMTGLRIGYAAGALS--L-IK  259 (400)
Q Consensus       185 ~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~--~S~SK~~~~~G~RiG~~v~~~~--l-i~  259 (400)
T Consensus       163 -~~~i~~~~-r~~~~~fh~d~~q~~----Gk~~~~~-------~~~~~dl~s~s~hk~yGPkG--iGalyv~~~Prvr~~  227 (404)
T TIGR02006       163 -IAAIGELC-RERKVLFHVDAAQSV----GKIPIDV-------EELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLE  227 (404)
T ss_pred             -HHHHHHHH-HHCCEEEEEECCCCC----CCEEEEH-------HHHHHHHHHHCCCCCCCCCC--CCEEEEECCCCEEEE
T ss_conf             -88999876-304414764000134----5113435-------34310121001231026755--212455127733552


Q ss_pred             HHHHH----CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf             75310----012223322222222-2222346764322222211000000024553047760330274089986264102
Q gi|254780602|r  260 SMIVL----QGQQTSGACSIAQWA-AVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLI  334 (400)
Q Consensus       260 ~l~~~----~~~~~~~~~~~~q~a-~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~  334 (400)
T Consensus       228 ~~~~GGG~erG~-r~Gtl~~~~ivG~G~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~---~~~--~~~~~~l  301 (404)
T TIGR02006       228 ALIHGGGHERGM-RSGTLPTHQIVGLGEAFRIAKEELAKDTARVLKLRDRLLNGIESIEEVYLNG---DLE--QRVKGNL  301 (404)
T ss_pred             EECCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHH--HHHHHHH
T ss_conf             000488743541-0244320143210167899999998889999999999999874456533121---144--3112221


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------------CCC-----CEEEEEEE--CCHHHHHHHHHHHH
Q ss_conf             3321133224898999999998739799835022--------------899-----72899962--99999999999999
Q gi|254780602|r  335 GKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------------GHG-----PSIRISYA--VSDAILEEACVRIK  393 (400)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------------g~~-----~~iRis~~--~~~e~l~~al~rl~  393 (400)
T Consensus       302 ---n~s-f~~veGesl~---~a~~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~  374 (404)
T TIGR02006       302 ---NVS-FNYVEGESLI---MALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVK  374 (404)
T ss_pred             ---EEE-EEEECHHHHH---HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf             ---012-2200204788---888887530564100133535578876064201223222100111210789999999999


Q ss_pred             HHHHHCC
Q ss_conf             9998609
Q gi|254780602|r  394 RFCHSLQ  400 (400)
Q Consensus       394 ~~l~~l~  400 (400)
T Consensus       375 ~~~~~lr  381 (404)
T TIGR02006       375 SAVDKLR  381 (404)
T ss_pred             HHHHHHH
T ss_conf             9999886