Query gi|254780602|ref|YP_003065015.1| aspartate aminotransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 400
No_of_seqs 182 out of 14719
Neff 8.3
Searched_HMMs 39220
Date Sun May 29 22:29:33 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780602.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK06507 consensus 100.0 0 0 716.5 20.7 400 1-400 1-400 (400)
2 PRK07543 consensus 100.0 0 0 718.0 19.2 400 1-400 1-400 (400)
3 PRK06107 aspartate aminotransf 100.0 0 0 709.3 20.5 397 4-400 6-402 (402)
4 PRK05764 aspartate aminotransf 100.0 0 0 704.1 19.9 389 1-400 1-389 (389)
5 PRK06575 consensus 100.0 0 0 702.2 21.4 399 1-399 1-399 (399)
6 PRK05794 consensus 100.0 0 0 690.1 19.7 396 2-399 1-396 (397)
7 PRK06056 consensus 100.0 0 0 686.5 19.8 397 2-400 5-402 (402)
8 PRK08069 consensus 100.0 0 0 682.8 18.8 390 2-397 1-390 (390)
9 PRK07310 consensus 100.0 0 0 680.4 20.5 393 2-400 1-394 (395)
10 PRK07367 consensus 100.0 0 0 680.9 18.9 385 4-399 1-385 (385)
11 PRK08443 consensus 100.0 0 0 671.0 20.4 386 3-400 1-388 (388)
12 PRK09148 aminotransferase; Val 100.0 0 0 669.7 18.4 388 1-399 1-392 (406)
13 PRK05942 aspartate aminotransf 100.0 0 0 666.8 19.9 385 2-400 6-394 (394)
14 PRK08068 transaminase; Reviewe 100.0 0 0 659.7 19.3 381 1-395 1-386 (389)
15 PRK07212 consensus 100.0 0 0 659.1 19.7 377 1-396 1-377 (378)
16 PRK09276 aspartate aminotransf 100.0 0 0 658.4 19.2 380 1-394 1-384 (385)
17 PRK08960 hypothetical protein; 100.0 0 0 656.1 19.6 382 1-398 1-387 (387)
18 PRK07366 succinyldiaminopimela 100.0 0 0 656.5 19.1 383 2-396 1-388 (388)
19 PRK07568 aspartate aminotransf 100.0 0 0 656.2 19.0 382 2-400 1-394 (396)
20 PRK09265 aminotransferase AlaT 100.0 0 0 652.1 18.4 385 4-400 6-403 (404)
21 PRK07681 aspartate aminotransf 100.0 0 0 650.9 18.8 380 1-395 1-385 (399)
22 PRK08363 alanine aminotransfer 100.0 0 0 650.6 17.4 384 1-398 1-394 (398)
23 PRK06290 aspartate aminotransf 100.0 0 0 648.2 18.9 386 4-400 9-404 (411)
24 PRK08175 aminotransferase; Val 100.0 0 0 647.2 19.2 383 6-399 4-390 (395)
25 TIGR03540 DapC_direct LL-diami 100.0 0 0 644.4 21.1 378 3-394 1-382 (383)
26 PRK07337 aminotransferase; Val 100.0 0 0 645.6 20.1 382 2-396 1-387 (388)
27 PRK06375 consensus 100.0 0 0 645.9 19.5 379 3-399 1-381 (381)
28 PRK08636 aspartate aminotransf 100.0 0 0 646.0 18.9 385 5-400 7-402 (403)
29 PRK06220 consensus 100.0 0 0 641.0 20.1 376 2-398 2-380 (384)
30 PRK08361 aspartate aminotransf 100.0 0 0 642.4 18.6 379 3-399 8-390 (390)
31 PRK07778 consensus 100.0 0 0 641.4 18.5 379 3-398 3-386 (386)
32 PRK07683 aminotransferase A; V 100.0 0 0 638.0 20.3 380 1-399 1-384 (387)
33 PRK08912 hypothetical protein; 100.0 0 0 641.4 17.5 381 1-398 1-386 (387)
34 PRK06108 aspartate aminotransf 100.0 0 0 640.5 17.6 377 5-398 2-382 (382)
35 PRK06207 aspartate aminotransf 100.0 0 0 638.7 18.1 388 1-400 1-405 (406)
36 PRK06836 aspartate aminotransf 100.0 0 0 638.3 18.4 375 2-400 1-394 (396)
37 PRK06348 aspartate aminotransf 100.0 0 0 637.1 19.3 376 3-395 5-382 (383)
38 PRK08362 consensus 100.0 0 0 634.6 19.1 382 2-400 1-387 (389)
39 PRK05957 aspartate aminotransf 100.0 0 0 631.1 19.0 380 1-399 1-386 (389)
40 PRK09082 putative aminotransfe 100.0 0 0 632.4 16.8 373 4-394 8-385 (386)
41 PRK07777 aminotransferase; Val 100.0 0 0 631.2 16.6 377 8-398 3-386 (386)
42 PRK07550 hypothetical protein; 100.0 0 0 630.8 16.4 380 4-396 2-386 (387)
43 PRK09147 aminotransferase; Pro 100.0 0 0 627.5 18.1 378 4-398 1-397 (397)
44 PRK07682 hypothetical protein; 100.0 0 0 625.9 17.6 374 9-400 2-378 (378)
45 TIGR03538 DapC_gpp succinyldia 100.0 0 0 620.0 17.5 375 4-396 1-394 (394)
46 COG0436 Aspartate/tyrosine/aro 100.0 0 0 617.3 19.2 380 8-400 3-393 (393)
47 PRK12414 putative aminotransfe 100.0 0 0 619.8 16.7 372 4-394 7-383 (384)
48 PRK07309 aromatic amino acid a 100.0 0 0 617.5 18.2 378 3-399 6-389 (390)
49 PRK07590 L,L-diaminopimelate a 100.0 0 0 616.6 16.8 375 1-396 1-409 (409)
50 PRK06855 aminotransferase; Val 100.0 0 0 612.2 17.6 388 7-399 9-430 (433)
51 PRK13355 bifunctional HTH-doma 100.0 0 0 602.0 18.0 370 18-400 133-516 (518)
52 TIGR03542 DAPAT_plant LL-diami 100.0 0 0 582.6 15.9 372 2-396 1-402 (402)
53 PRK05839 hypothetical protein; 100.0 0 0 580.6 17.1 363 10-399 2-375 (376)
54 TIGR01265 tyr_nico_aTase tyros 100.0 0 0 575.2 13.1 374 15-398 20-422 (424)
55 PRK07865 N-succinyldiaminopime 100.0 0 0 563.6 16.0 357 6-394 2-364 (364)
56 TIGR03539 DapC_actino succinyl 100.0 0 0 556.9 17.2 351 11-392 1-356 (357)
57 PRK06225 aspartate aminotransf 100.0 0 0 552.5 16.2 366 9-400 1-373 (375)
58 TIGR03537 DapC succinyldiamino 100.0 0 0 547.1 15.5 343 32-394 1-349 (350)
59 pfam00155 Aminotran_1_2 Aminot 100.0 0 0 536.3 13.2 345 31-392 1-351 (351)
60 KOG0257 consensus 100.0 0 0 540.1 9.3 384 4-395 8-416 (420)
61 PRK07324 transaminase; Validat 100.0 0 0 532.3 13.1 328 51-400 45-372 (373)
62 TIGR01264 tyr_amTase_E tyrosin 100.0 0 0 526.3 15.2 381 8-398 9-413 (415)
63 PRK09440 avtA valine--pyruvate 100.0 0 0 503.2 16.6 352 30-400 29-413 (416)
64 cd00609 AAT_like Aspartate ami 100.0 0 0 495.0 13.3 346 34-394 1-350 (350)
65 COG1168 MalY Bifunctional PLP- 100.0 0 0 489.5 12.9 381 1-400 1-388 (388)
66 PRK00950 histidinol-phosphate 100.0 0 0 483.6 13.8 362 1-397 4-369 (369)
67 KOG0259 consensus 100.0 0 0 474.1 16.2 359 30-398 60-433 (447)
68 PRK03566 consensus 100.0 0 0 472.7 11.9 356 5-397 7-363 (365)
69 PRK02731 histidinol-phosphate 100.0 0 0 465.2 12.0 357 6-398 8-366 (367)
70 PRK03158 histidinol-phosphate 100.0 0 0 446.5 12.4 356 2-395 1-358 (359)
71 PRK05166 histidinol-phosphate 100.0 0 0 444.6 13.0 360 3-397 11-372 (374)
72 PRK03321 putative aminotransfe 100.0 0 0 439.1 12.6 348 4-399 5-352 (352)
73 COG1167 ARO8 Transcriptional r 100.0 0 0 430.2 15.5 350 31-399 89-456 (459)
74 PRK06358 threonine-phosphate d 100.0 0 0 426.4 12.4 344 19-396 7-353 (354)
75 TIGR01141 hisC histidinol-phos 100.0 0 0 427.7 10.3 363 6-392 2-374 (377)
76 PRK05387 histidinol-phosphate 100.0 0 0 422.6 11.0 349 3-398 4-353 (353)
77 PRK04152 consensus 100.0 0 0 419.2 11.9 359 2-395 1-363 (364)
78 PRK07392 threonine-phosphate d 100.0 0 0 417.4 12.1 346 19-398 10-357 (358)
79 PRK02610 histidinol-phosphate 100.0 0 0 409.4 11.6 359 1-399 2-369 (369)
80 PRK03317 histidinol-phosphate 100.0 0 0 404.7 11.8 335 31-397 26-364 (369)
81 PRK01533 histidinol-phosphate 100.0 0 0 398.3 12.2 355 2-399 1-356 (366)
82 PRK07908 hypothetical protein; 100.0 0 0 396.8 12.5 323 29-397 19-345 (346)
83 PRK04870 histidinol-phosphate 100.0 0 0 388.2 13.2 340 4-394 10-354 (356)
84 PRK08153 histidinol-phosphate 100.0 0 0 386.9 13.0 359 4-400 7-368 (370)
85 PRK08056 threonine-phosphate d 100.0 0 0 388.4 11.1 345 19-398 8-355 (356)
86 PRK08637 hypothetical protein; 100.0 0 0 385.0 11.7 349 34-400 6-386 (386)
87 PRK09105 putative aminotransfe 100.0 0 0 384.1 11.4 326 31-397 46-372 (374)
88 PRK03967 histidinol-phosphate 100.0 0 0 383.2 12.0 332 5-399 3-335 (337)
89 KOG0256 consensus 100.0 0 0 374.7 10.1 328 62-398 115-461 (471)
90 PRK03262 consensus 100.0 0 0 366.7 9.8 341 5-400 10-354 (355)
91 PRK04781 histidinol-phosphate 100.0 0 0 366.0 10.0 344 4-394 10-360 (362)
92 COG0079 HisC Histidinol-phosph 100.0 0 0 363.3 12.0 331 31-398 22-354 (356)
93 PRK01688 histidinol-phosphate 100.0 0 0 362.6 9.8 331 4-384 9-343 (355)
94 PRK04635 histidinol-phosphate 100.0 0 0 363.0 9.5 339 4-397 5-346 (346)
95 KOG0258 consensus 100.0 0 0 336.5 11.8 389 4-398 13-469 (475)
96 PRK08354 putative aminotransfe 100.0 0 0 336.7 9.0 304 31-397 8-311 (312)
97 KOG0634 consensus 100.0 0 0 333.7 11.2 361 28-398 33-466 (472)
98 PRK06425 histidinol-phosphate 100.0 0 0 332.2 9.8 314 31-396 16-331 (332)
99 PRK05664 threonine-phosphate d 100.0 0 0 304.1 10.9 302 31-392 20-325 (330)
100 PRK06959 putative threonine-ph 100.0 4.2E-45 0 294.5 10.3 323 19-399 12-334 (339)
101 TIGR01140 CobD L-threonine-O-3 100.0 7E-45 0 293.3 7.9 332 31-390 5-347 (349)
102 COG3977 Alanine-alpha-ketoisov 100.0 5.4E-42 0 275.8 18.2 359 15-399 15-412 (417)
103 PRK09275 aspartate aminotransf 100.0 3.7E-41 1.4E-45 270.7 14.3 329 63-399 133-522 (531)
104 KOG0633 consensus 100.0 2.4E-35 6.2E-40 235.3 9.7 331 28-396 38-375 (375)
105 PRK09257 aromatic amino acid a 100.0 2.3E-34 6E-39 229.3 8.4 356 7-394 4-394 (397)
106 COG1448 TyrB Aspartate/tyrosin 100.0 5.3E-32 1.4E-36 215.0 7.2 357 6-393 3-393 (396)
107 pfam04864 Alliinase_C Allinase 100.0 1.5E-28 3.9E-33 193.9 9.8 287 70-396 45-363 (363)
108 TIGR01979 sufS cysteine desulf 99.9 1.4E-27 3.6E-32 188.0 3.8 329 29-396 15-408 (409)
109 PRK10874 cysteine sulfinate de 99.9 1.2E-25 3.1E-30 176.2 10.9 333 32-400 19-400 (401)
110 TIGR03392 FeS_syn_CsdA cystein 99.9 2.4E-25 6E-30 174.5 11.8 333 32-400 16-397 (398)
111 PRK09295 selenocysteine lyase; 99.9 4.9E-25 1.3E-29 172.5 11.7 333 29-398 20-404 (406)
112 cd06453 SufS_like Cysteine des 99.9 9E-24 2.3E-28 164.9 7.4 312 43-391 9-372 (373)
113 TIGR03403 nifS_epsilon cystein 99.9 8E-24 2.1E-28 165.2 7.0 317 43-400 9-377 (382)
114 pfam00266 Aminotran_5 Aminotra 99.9 2.9E-23 7.4E-28 161.7 9.7 310 44-386 10-369 (371)
115 TIGR03402 FeS_nifS cysteine de 99.9 4.8E-23 1.2E-27 160.4 7.8 324 44-400 10-374 (379)
116 COG0520 csdA Selenocysteine ly 99.9 3E-22 7.5E-27 155.6 11.5 329 30-396 20-403 (405)
117 PRK02948 cysteine desulfurase; 99.9 7.3E-23 1.9E-27 159.3 7.4 324 43-399 10-375 (381)
118 PRK05958 8-amino-7-oxononanoat 99.9 7.7E-22 2E-26 153.1 12.0 334 28-398 36-386 (387)
119 cd06454 KBL_like KBL_like; thi 99.9 8.9E-21 2.3E-25 146.6 13.2 326 31-394 1-347 (349)
120 TIGR01977 am_tr_V_EF2568 cyste 99.8 1.1E-20 2.8E-25 146.1 9.7 314 38-393 5-382 (384)
121 PRK07179 hypothetical protein; 99.8 2E-20 5.1E-25 144.5 10.4 330 28-399 51-400 (408)
122 PRK13392 5-aminolevulinate syn 99.8 5.3E-20 1.4E-24 141.9 12.0 330 29-399 44-398 (410)
123 PRK10534 L-threonine aldolase; 99.8 1.5E-20 3.8E-25 145.2 8.6 317 33-398 1-333 (333)
124 PRK13393 5-aminolevulinate syn 99.8 7.4E-20 1.9E-24 141.0 11.4 328 31-399 45-397 (404)
125 PRK09064 5-aminolevulinate syn 99.8 2.9E-19 7.3E-24 137.4 12.7 328 30-399 44-397 (406)
126 PRK06939 2-amino-3-ketobutyrat 99.8 2.9E-19 7.5E-24 137.4 11.4 329 29-399 40-394 (395)
127 PRK08249 cystathionine gamma-s 99.8 6.1E-19 1.5E-23 135.4 11.0 226 62-316 54-284 (398)
128 cd06502 TA_like Low-specificit 99.8 4.4E-19 1.1E-23 136.3 9.0 312 44-394 9-337 (338)
129 COG1104 NifS Cysteine sulfinat 99.8 8E-20 2E-24 140.8 5.0 322 43-400 11-379 (386)
130 PRK07503 methionine gamma-lyas 99.8 1.9E-18 4.8E-23 132.4 11.8 234 53-316 46-287 (403)
131 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 8.9E-19 2.3E-23 134.4 9.7 318 45-396 13-360 (361)
132 TIGR01825 gly_Cac_T_rel pyrido 99.8 8E-18 2E-22 128.6 13.6 324 29-400 31-390 (392)
133 PRK06767 methionine gamma-lyas 99.8 5E-18 1.3E-22 129.9 12.4 230 61-320 50-287 (386)
134 TIGR03235 DNA_S_dndA cysteine 99.8 1.7E-19 4.3E-24 138.8 4.7 289 43-368 8-325 (354)
135 PRK06234 methionine gamma-lyas 99.8 5.5E-18 1.4E-22 129.6 12.1 226 62-316 54-287 (399)
136 TIGR03576 pyridox_MJ0158 pyrid 99.8 5.7E-18 1.5E-22 129.5 12.1 305 26-385 18-332 (346)
137 PRK07504 O-succinylhomoserine 99.8 3.5E-18 8.9E-23 130.8 10.8 226 61-316 54-286 (397)
138 PRK05937 8-amino-7-oxononanoat 99.8 4.6E-18 1.2E-22 130.1 11.4 322 30-400 3-352 (370)
139 TIGR00858 bioF 8-amino-7-oxono 99.8 2E-18 5.1E-23 132.3 8.9 326 25-392 15-377 (378)
140 cd06451 AGAT_like Alanine-glyo 99.8 4.3E-18 1.1E-22 130.2 10.1 323 43-397 8-356 (356)
141 PRK08133 O-succinylhomoserine 99.8 9.1E-18 2.3E-22 128.3 11.4 224 63-316 52-282 (391)
142 cd01494 AAT_I Aspartate aminot 99.8 2.5E-19 6.5E-24 137.8 3.0 166 70-253 2-169 (170)
143 cd00614 CGS_like CGS_like: Cys 99.8 9.8E-18 2.5E-22 128.1 10.7 224 62-316 32-261 (369)
144 COG0156 BioF 7-keto-8-aminopel 99.8 1.4E-17 3.5E-22 127.2 11.2 324 28-394 36-386 (388)
145 pfam01053 Cys_Met_Meta_PP Cys/ 99.7 7.4E-18 1.9E-22 128.8 8.9 223 63-316 45-274 (381)
146 PRK06460 hypothetical protein; 99.7 1.4E-17 3.6E-22 127.1 10.2 223 62-315 37-264 (375)
147 PRK07810 O-succinylhomoserine 99.7 1.8E-17 4.7E-22 126.4 10.7 234 53-316 54-294 (406)
148 PRK11658 UDP-4-amino-4-deoxy-L 99.7 4E-18 1E-22 130.4 7.3 202 32-267 3-209 (379)
149 COG0399 WecE Predicted pyridox 99.7 2.7E-17 7E-22 125.4 10.8 318 46-398 14-373 (374)
150 PRK06176 cystathionine gamma-s 99.7 2.1E-17 5.3E-22 126.1 10.0 222 63-316 43-270 (379)
151 TIGR03588 PseC UDP-4-keto-6-de 99.7 9.1E-18 2.3E-22 128.3 7.3 201 39-268 4-213 (380)
152 PRK07505 hypothetical protein; 99.7 6.8E-17 1.7E-21 123.0 11.8 329 28-399 46-403 (405)
153 PRK08247 cystathionine gamma-s 99.7 3.6E-17 9.2E-22 124.6 10.3 287 63-400 45-366 (366)
154 KOG1412 consensus 99.7 2.5E-18 6.4E-23 131.7 4.3 356 9-395 10-405 (410)
155 PRK09028 cystathionine beta-ly 99.7 4.3E-17 1.1E-21 124.2 10.4 223 63-316 54-281 (394)
156 PRK07050 cystathionine beta-ly 99.7 1.8E-17 4.5E-22 126.5 8.2 223 63-316 58-286 (394)
157 PRK08064 cystathionine beta-ly 99.7 3.5E-17 9E-22 124.7 9.6 223 62-316 46-274 (390)
158 PRK07811 cystathionine gamma-s 99.7 3.2E-17 8.1E-22 125.0 9.2 223 63-316 51-279 (386)
159 PRK05967 cystathionine beta-ly 99.7 9.5E-17 2.4E-21 122.1 11.5 224 63-316 55-284 (392)
160 pfam01041 DegT_DnrJ_EryC1 DegT 99.7 9.1E-18 2.3E-22 128.3 5.9 193 47-268 5-203 (363)
161 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 2.7E-17 6.9E-22 125.4 7.9 200 34-266 2-207 (375)
162 PRK05968 hypothetical protein; 99.7 9.1E-17 2.3E-21 122.2 10.6 233 53-316 44-283 (389)
163 PRK08045 cystathionine gamma-s 99.7 8E-17 2E-21 122.5 10.2 223 63-316 45-273 (386)
164 PRK08861 cystathionine gamma-s 99.7 9.8E-17 2.5E-21 122.0 10.5 223 63-316 46-274 (388)
165 pfam01212 Beta_elim_lyase Beta 99.7 2.6E-18 6.7E-23 131.6 2.5 261 44-328 9-285 (288)
166 KOG1549 consensus 99.7 1.6E-17 4E-22 126.9 6.4 204 28-255 39-257 (428)
167 KOG1368 consensus 99.7 8.2E-17 2.1E-21 122.5 10.0 312 46-398 35-369 (384)
168 cd00616 AHBA_syn 3-amino-5-hyd 99.7 6.4E-18 1.6E-22 129.2 4.0 190 50-268 2-196 (352)
169 PRK06084 O-acetylhomoserine am 99.7 2.6E-16 6.6E-21 119.4 11.8 163 64-253 52-219 (424)
170 PRK08776 cystathionine gamma-s 99.7 8.5E-17 2.2E-21 122.4 8.7 223 63-316 53-281 (405)
171 TIGR01976 am_tr_V_VC1184 cyste 99.7 5.9E-17 1.5E-21 123.3 7.8 330 29-388 18-406 (410)
172 KOG1411 consensus 99.7 2.9E-17 7.4E-22 125.2 5.9 340 11-379 34-405 (427)
173 PRK05939 hypothetical protein; 99.7 2E-16 5.1E-21 120.1 10.1 180 43-252 21-205 (396)
174 PRK08134 O-acetylhomoserine am 99.7 3E-16 7.6E-21 119.0 10.8 174 53-252 45-224 (433)
175 PRK08114 cystathionine beta-ly 99.7 1.9E-16 4.9E-21 120.2 9.6 223 63-316 55-284 (395)
176 COG2008 GLY1 Threonine aldolas 99.7 1.5E-16 3.7E-21 121.0 8.3 313 44-396 11-341 (342)
177 PRK05613 O-acetylhomoserine am 99.7 8.6E-16 2.2E-20 116.2 11.0 165 63-253 62-231 (437)
178 PRK08248 O-acetylhomoserine am 99.7 9.2E-16 2.3E-20 116.1 11.1 155 63-243 55-214 (431)
179 PRK08574 cystathionine gamma-s 99.7 5.1E-16 1.3E-20 117.6 9.5 223 63-316 46-273 (384)
180 PRK07582 cystathionine gamma-l 99.7 2.3E-16 5.8E-21 119.8 7.6 219 63-316 46-271 (370)
181 PRK02936 argD acetylornithine 99.7 1.6E-15 4.2E-20 114.5 11.6 330 28-396 26-377 (377)
182 PRK12381 bifunctional succinyl 99.7 4E-15 1E-19 112.2 12.9 339 28-399 36-400 (406)
183 cd00610 OAT_like Acetyl ornith 99.6 4.7E-15 1.2E-19 111.7 13.2 345 28-396 33-413 (413)
184 PRK09331 Sep-tRNA:Cys-tRNA syn 99.6 5.8E-16 1.5E-20 117.3 8.4 334 31-399 17-381 (386)
185 PRK06702 O-acetylhomoserine am 99.6 2.1E-15 5.4E-20 113.9 10.9 158 61-243 50-212 (432)
186 PRK05093 argD bifunctional N-s 99.6 4.3E-15 1.1E-19 112.0 12.4 339 28-399 37-401 (403)
187 PRK02627 acetylornithine amino 99.6 7.4E-15 1.9E-19 110.5 13.5 333 28-399 36-397 (398)
188 TIGR03246 arg_catab_astC succi 99.6 5.3E-15 1.4E-19 111.4 12.5 337 28-399 32-396 (397)
189 PRK07812 O-acetylhomoserine am 99.6 2.4E-15 6E-20 113.6 10.3 164 63-252 62-230 (436)
190 PRK07671 cystathionine beta-ly 99.6 1.7E-15 4.2E-20 114.5 9.3 222 63-316 43-270 (377)
191 PRK13479 2-aminoethylphosphona 99.6 1.9E-15 4.7E-20 114.2 9.6 325 43-399 14-364 (368)
192 PRK07049 methionine gamma-lyas 99.6 1.7E-15 4.2E-20 114.5 9.3 229 63-317 74-316 (427)
193 PRK03244 argD acetylornithine 99.6 1.1E-14 2.8E-19 109.5 13.3 336 29-399 41-395 (398)
194 PRK01278 argD bifunctional N-s 99.6 9.2E-15 2.3E-19 110.0 12.7 335 28-399 28-389 (389)
195 PRK05994 O-acetylhomoserine am 99.6 1.8E-15 4.6E-20 114.3 9.0 165 62-252 53-223 (426)
196 COG0075 Serine-pyruvate aminot 99.6 2.4E-15 6.2E-20 113.5 9.4 324 43-399 14-364 (383)
197 PRK13034 serine hydroxymethylt 99.6 3E-14 7.7E-19 106.8 14.0 360 1-399 5-396 (422)
198 TIGR03301 PhnW-AepZ 2-aminoeth 99.6 6.7E-15 1.7E-19 110.8 9.6 319 43-396 8-355 (355)
199 PRK04073 rocD ornithine--oxo-a 99.6 6.1E-14 1.5E-18 105.0 13.2 333 29-397 38-396 (396)
200 PRK00011 glyA serine hydroxyme 99.6 9.6E-14 2.5E-18 103.8 14.0 343 16-397 13-387 (415)
201 PRK07269 cystathionine gamma-s 99.6 1.2E-14 3E-19 109.3 9.3 231 63-327 47-285 (364)
202 PRK07480 putative aminotransfe 99.6 1.1E-13 2.8E-18 103.4 13.8 345 29-399 51-452 (459)
203 PRK05964 adenosylmethionine--8 99.6 1.1E-13 2.9E-18 103.3 13.7 338 29-399 40-421 (421)
204 PRK06917 hypothetical protein; 99.6 6.9E-14 1.8E-18 104.6 12.6 353 28-399 28-438 (447)
205 PRK13520 L-tyrosine decarboxyl 99.6 4.7E-14 1.2E-18 105.7 11.5 345 17-397 9-374 (375)
206 PRK12389 glutamate-1-semialdeh 99.6 1.7E-14 4.2E-19 108.4 9.1 344 29-399 51-428 (429)
207 PRK00854 rocD ornithine--oxo-a 99.6 4.4E-14 1.1E-18 105.9 11.1 333 29-397 42-403 (404)
208 PRK00062 glutamate-1-semialdeh 99.6 2.5E-14 6.4E-19 107.3 9.4 341 29-400 50-428 (429)
209 PRK04260 acetylornithine amino 99.6 4E-14 1E-18 106.1 10.3 333 28-396 26-375 (375)
210 PRK07678 aminotransferase; Val 99.5 1.2E-13 3.2E-18 103.1 12.3 352 29-400 45-451 (451)
211 PRK06434 cystathionine gamma-l 99.5 6.9E-14 1.8E-18 104.6 10.9 221 63-316 55-282 (384)
212 PRK08593 4-aminobutyrate amino 99.5 1.4E-13 3.5E-18 102.8 12.3 347 29-400 43-434 (448)
213 PTZ00125 ornithine aminotransf 99.5 1.5E-13 3.9E-18 102.5 12.2 336 29-399 47-414 (415)
214 PRK06942 glutamate-1-semialdeh 99.5 6.2E-14 1.6E-18 104.9 10.2 347 29-399 48-425 (425)
215 COG4992 ArgD Ornithine/acetylo 99.5 1E-13 2.6E-18 103.6 11.2 332 29-399 40-399 (404)
216 COG0626 MetC Cystathionine bet 99.5 4.6E-14 1.2E-18 105.7 9.2 228 62-320 55-291 (396)
217 PRK09044 consensus 99.5 1.9E-13 4.8E-18 102.0 12.2 334 29-398 40-417 (418)
218 PRK08360 4-aminobutyrate amino 99.5 2.1E-13 5.3E-18 101.7 12.4 347 28-400 38-428 (443)
219 TIGR01822 2am3keto_CoA 2-amino 99.5 8.7E-14 2.2E-18 104.0 10.3 327 28-397 35-390 (395)
220 PRK07323 consensus 99.5 1.5E-13 3.9E-18 102.5 11.1 345 29-399 56-443 (443)
221 cd00378 SHMT Serine-glycine hy 99.5 6.4E-13 1.6E-17 98.8 14.1 345 16-397 7-384 (402)
222 PRK06105 aminotransferase; Pro 99.5 4.5E-13 1.2E-17 99.7 13.3 348 29-399 46-450 (460)
223 PRK04612 argD bifunctional N-s 99.5 5E-13 1.3E-17 99.4 13.3 337 28-398 37-403 (408)
224 PRK06916 adenosylmethionine--8 99.5 3.9E-13 1E-17 100.1 12.6 346 29-399 56-458 (462)
225 PRK06777 4-aminobutyrate amino 99.5 2.4E-13 6.2E-18 101.3 11.2 344 29-398 38-421 (421)
226 PRK07036 hypothetical protein; 99.5 3.1E-13 7.8E-18 100.7 11.7 345 28-399 48-453 (466)
227 PRK13360 omega amino acid--pyr 99.5 5.5E-13 1.4E-17 99.2 12.8 341 28-399 42-440 (441)
228 PRK07483 hypothetical protein; 99.5 4.5E-13 1.1E-17 99.7 11.8 354 28-398 27-437 (443)
229 PRK07046 aminotransferase; Val 99.5 3.2E-13 8.2E-18 100.6 11.0 339 30-399 73-450 (452)
230 PRK07482 hypothetical protein; 99.5 8.3E-13 2.1E-17 98.1 12.8 349 28-399 47-455 (461)
231 PRK00451 glycine dehydrogenase 99.5 3.1E-13 7.8E-18 100.7 10.5 343 16-396 49-448 (449)
232 PRK07481 hypothetical protein; 99.5 4E-13 1E-17 100.0 11.1 349 29-400 40-446 (448)
233 PRK11522 putrescine--2-oxoglut 99.5 8.4E-13 2.1E-17 98.0 12.6 322 46-400 109-462 (468)
234 PRK05965 hypothetical protein; 99.5 5.8E-13 1.5E-17 99.0 11.7 347 29-399 44-448 (459)
235 PRK08088 4-aminobutyrate amino 99.5 7.2E-13 1.8E-17 98.4 12.1 350 28-400 39-426 (426)
236 PRK09792 PLP-dependent GABA am 99.5 9.3E-13 2.4E-17 97.8 12.5 341 29-397 38-420 (421)
237 PRK00615 glutamate-1-semialdeh 99.5 1.1E-13 2.8E-18 103.5 7.7 347 29-399 51-429 (433)
238 PRK05630 adenosylmethionine--8 99.5 8.1E-13 2.1E-17 98.1 12.1 334 29-398 40-422 (423)
239 PRK08117 4-aminobutyrate amino 99.5 1.7E-12 4.3E-17 96.2 13.6 345 28-399 38-428 (429)
240 PRK09221 beta alanine--pyruvat 99.5 1.7E-12 4.4E-17 96.1 13.3 342 29-399 47-444 (445)
241 PRK06173 adenosylmethionine--8 99.5 2.1E-12 5.4E-17 95.6 13.0 335 28-398 41-425 (429)
242 PRK06058 4-aminobutyrate amino 99.5 3.3E-12 8.4E-17 94.4 13.9 345 30-399 55-446 (446)
243 PRK06082 4-aminobutyrate amino 99.5 1.8E-12 4.5E-17 96.1 12.5 344 28-399 70-453 (460)
244 PRK07495 4-aminobutyrate amino 99.5 2.6E-12 6.6E-17 95.1 13.0 349 29-400 36-421 (422)
245 TIGR00713 hemL glutamate-1-sem 99.5 1.5E-13 3.7E-18 102.7 6.6 345 28-399 45-434 (434)
246 PRK03715 argD bifunctional N-s 99.5 1E-12 2.6E-17 97.6 10.8 335 28-399 33-394 (395)
247 PRK07986 adenosylmethionine--8 99.5 3.4E-12 8.7E-17 94.3 13.4 336 28-399 40-424 (428)
248 KOG0053 consensus 99.5 1.2E-13 3.1E-18 103.1 5.9 186 72-282 77-268 (409)
249 PRK06943 adenosylmethionine--8 99.4 2.4E-12 6E-17 95.3 12.4 342 29-398 51-445 (452)
250 PRK07030 adenosylmethionine--8 99.4 2.9E-12 7.4E-17 94.8 12.7 345 28-398 44-446 (467)
251 PTZ00094 serine hydroxymethylt 99.4 4.4E-12 1.1E-16 93.6 13.5 351 8-396 12-403 (450)
252 PRK08466 consensus 99.4 3.9E-12 9.9E-17 94.0 12.9 339 28-400 43-430 (430)
253 TIGR01325 O_suc_HS_sulf O-succ 99.4 1.2E-14 3.1E-19 109.2 0.2 202 91-317 69-276 (386)
254 PRK07894 consensus 99.4 4.4E-12 1.1E-16 93.6 12.6 338 28-399 48-429 (430)
255 cd00615 Orn_deC_like Ornithine 99.4 7.1E-15 1.8E-19 110.7 -2.1 168 70-256 61-236 (294)
256 COG0112 GlyA Glycine/serine hy 99.4 1.6E-11 4E-16 90.3 14.6 345 15-399 13-391 (413)
257 PRK06918 4-aminobutyrate amino 99.4 2.3E-12 5.9E-17 95.4 10.3 347 29-399 53-445 (454)
258 pfam00464 SHMT Serine hydroxym 99.4 2.2E-12 5.6E-17 95.5 10.1 325 16-378 8-360 (380)
259 PRK06938 diaminobutyrate--2-ox 99.4 5.7E-12 1.5E-16 93.0 12.2 352 29-398 61-460 (464)
260 pfam01276 OKR_DC_1 Orn/Lys/Arg 99.4 3.1E-14 7.9E-19 106.8 0.4 168 70-253 68-253 (417)
261 TIGR01328 met_gam_lyase methio 99.4 2.5E-13 6.5E-18 101.2 4.8 202 91-316 74-282 (392)
262 PRK04013 argD acetylornithine/ 99.4 1.4E-11 3.6E-16 90.6 13.6 322 29-399 22-361 (364)
263 PRK05769 4-aminobutyrate amino 99.4 3.5E-12 9E-17 94.2 10.3 344 29-399 53-441 (442)
264 PRK06062 hypothetical protein; 99.4 8.4E-12 2.1E-16 91.9 12.1 347 29-399 34-429 (434)
265 cd06450 DOPA_deC_like DOPA dec 99.4 3.7E-13 9.3E-18 100.2 4.8 310 45-394 10-344 (345)
266 PRK06541 hypothetical protein; 99.4 9.1E-12 2.3E-16 91.7 11.6 351 29-399 50-456 (460)
267 TIGR03372 putres_am_tran putre 99.4 5.8E-12 1.5E-16 92.9 10.5 336 29-396 73-442 (442)
268 PRK08742 adenosylmethionine--8 99.4 1E-11 2.6E-16 91.5 11.7 345 29-398 62-467 (472)
269 PRK12403 putative aminotransfe 99.4 1.4E-11 3.5E-16 90.6 12.3 348 29-399 52-453 (460)
270 TIGR02379 ECA_wecE TDP-4-keto- 99.4 7.4E-13 1.9E-17 98.4 4.7 190 50-266 14-208 (376)
271 TIGR00707 argD acetylornithine 99.3 6.2E-12 1.6E-16 92.8 9.1 338 29-397 27-402 (402)
272 PRK06931 diaminobutyrate--2-ox 99.3 3.8E-11 9.8E-16 87.9 12.7 348 29-398 51-449 (454)
273 COG0001 HemL Glutamate-1-semia 99.3 5.3E-12 1.4E-16 93.2 8.3 341 30-400 52-430 (432)
274 TIGR01326 OAH_OAS_sulfhy O-ace 99.3 9E-13 2.3E-17 97.9 4.3 267 95-385 76-425 (434)
275 PRK08555 consensus 99.3 2.6E-11 6.6E-16 89.0 11.4 346 29-399 50-443 (443)
276 PRK05639 4-aminobutyrate amino 99.3 7E-11 1.8E-15 86.3 13.2 343 29-398 51-443 (457)
277 cd00613 GDC-P Glycine cleavage 99.3 3.7E-12 9.4E-17 94.1 6.2 288 19-325 4-338 (398)
278 TIGR01821 5aminolev_synth 5-am 99.3 2.7E-12 6.8E-17 95.0 4.7 347 3-392 6-418 (427)
279 COG0076 GadB Glutamate decarbo 99.3 8.7E-12 2.2E-16 91.9 6.5 271 44-327 73-377 (460)
280 PRK06209 glutamate-1-semialdeh 99.3 8.3E-12 2.1E-16 92.0 5.7 329 29-400 46-407 (431)
281 TIGR02539 SepCysS Sep-tRNA:Cys 99.3 2.9E-11 7.4E-16 88.6 8.1 295 73-400 57-381 (381)
282 COG0160 GabT 4-aminobutyrate a 99.2 5.6E-11 1.4E-15 86.9 9.3 350 29-399 54-446 (447)
283 cd00617 Tnase_like Tryptophana 99.2 7.6E-11 1.9E-15 86.1 10.0 350 22-396 2-409 (431)
284 COG2873 MET17 O-acetylhomoseri 99.2 1.1E-11 2.8E-16 91.2 5.0 141 95-256 81-225 (426)
285 KOG1358 consensus 99.2 2.5E-10 6.5E-15 82.9 11.9 340 28-399 91-466 (467)
286 PRK13237 tyrosine phenol-lyase 99.2 1.1E-10 2.8E-15 85.2 8.5 365 9-397 14-435 (459)
287 TIGR02080 O_succ_thio_ly O-suc 99.2 1.3E-11 3.4E-16 90.7 3.5 241 34-316 26-273 (383)
288 PRK13580 serine hydroxymethylt 99.2 1.7E-09 4.4E-14 77.8 13.8 330 34-398 54-447 (493)
289 PRK09264 diaminobutyrate--2-ox 99.2 9.3E-10 2.4E-14 79.5 12.3 340 28-399 36-417 (426)
290 TIGR02407 ectoine_ectB diamino 99.1 4.6E-10 1.2E-14 81.4 8.0 213 153-398 177-413 (413)
291 PRK13238 tnaA tryptophanase; P 99.1 3.2E-10 8.1E-15 82.3 7.0 361 9-395 14-434 (461)
292 PRK06149 hypothetical protein; 99.1 2.5E-09 6.5E-14 76.8 10.8 326 46-398 601-970 (972)
293 pfam06838 Alum_res Aluminium r 99.0 2E-10 5.1E-15 83.5 3.5 198 47-264 28-249 (405)
294 COG1982 LdcC Arginine/lysine/o 99.0 2.1E-10 5.4E-15 83.4 3.5 149 93-254 88-246 (557)
295 COG1103 Archaea-specific pyrid 99.0 2.3E-09 5.8E-14 77.1 8.7 335 31-400 15-382 (382)
296 PRK06148 hypothetical protein; 99.0 1.3E-08 3.4E-13 72.4 12.1 328 45-398 641-1012(1015)
297 TIGR03251 LAT_fam L-lysine 6-t 99.0 1.8E-09 4.6E-14 77.7 7.2 331 29-394 36-430 (431)
298 PRK02769 histidine decarboxyla 99.0 1.5E-09 3.8E-14 78.2 6.8 285 70-394 63-368 (380)
299 pfam00202 Aminotran_3 Aminotra 99.0 1.4E-09 3.6E-14 78.4 6.1 269 29-312 14-316 (338)
300 KOG2862 consensus 99.0 4.9E-09 1.2E-13 75.1 8.7 321 52-398 31-382 (385)
301 KOG1359 consensus 98.9 2.2E-08 5.7E-13 71.1 10.8 320 32-396 68-410 (417)
302 KOG1357 consensus 98.9 2.1E-08 5.3E-13 71.3 10.3 316 33-394 138-498 (519)
303 PRK04311 selenocysteine syntha 98.9 1.8E-08 4.5E-13 71.7 9.6 332 44-397 99-464 (465)
304 pfam03841 SelA L-seryl-tRNA se 98.8 1.4E-09 3.7E-14 78.3 2.9 263 33-312 8-296 (367)
305 PRK08297 L-lysine aminotransfe 98.8 1.9E-08 4.9E-13 71.5 8.6 275 90-399 118-448 (449)
306 COG0161 BioA Adenosylmethionin 98.8 1.5E-07 3.9E-12 66.0 11.6 328 46-399 62-444 (449)
307 PRK04366 glycine dehydrogenase 98.8 4E-08 1E-12 69.6 8.3 346 18-396 55-449 (490)
308 COG1921 SelA Selenocysteine sy 98.7 1.1E-08 2.7E-13 73.0 4.4 229 33-284 29-266 (395)
309 COG3033 TnaA Tryptophanase [Am 98.7 8.8E-08 2.2E-12 67.4 9.1 358 19-397 25-446 (471)
310 TIGR01885 Orn_aminotrans ornit 98.7 4.5E-08 1.1E-12 69.2 7.0 337 29-396 40-426 (426)
311 PRK13578 ornithine decarboxyla 98.7 3.4E-08 8.8E-13 69.9 6.3 151 94-253 193-368 (720)
312 TIGR02326 transamin_PhnW 2-ami 98.7 1.2E-07 3E-12 66.7 8.5 321 43-397 12-364 (366)
313 TIGR00700 GABAtrnsam 4-aminobu 98.7 6.2E-08 1.6E-12 68.4 6.6 346 29-397 31-426 (427)
314 TIGR01324 cysta_beta_ly_B cyst 98.7 2.1E-08 5.3E-13 71.3 3.9 179 57-262 42-228 (389)
315 TIGR01329 cysta_beta_ly_E cyst 98.6 1.4E-08 3.7E-13 72.2 2.7 198 62-284 41-256 (415)
316 COG1003 GcvP Glycine cleavage 98.5 3.4E-08 8.6E-13 70.0 1.9 194 32-244 67-272 (496)
317 KOG1401 consensus 98.5 5E-07 1.3E-11 62.9 7.3 344 28-399 53-431 (433)
318 KOG1360 consensus 98.5 3.6E-07 9.2E-12 63.7 5.9 220 152-395 287-521 (570)
319 pfam00282 Pyridoxal_deC Pyrido 98.5 9E-08 2.3E-12 67.4 2.7 233 12-258 15-280 (370)
320 COG4100 Cystathionine beta-lya 98.5 1.8E-07 4.7E-12 65.5 4.3 194 48-262 39-257 (416)
321 TIGR01788 Glu-decarb-GAD gluta 98.5 7.7E-08 2E-12 67.8 2.3 359 25-399 42-492 (493)
322 PRK12566 glycine dehydrogenase 98.4 5.8E-07 1.5E-11 62.5 6.3 208 31-257 500-726 (954)
323 KOG1404 consensus 98.4 2E-06 5E-11 59.3 8.2 339 29-392 48-432 (442)
324 PRK05367 glycine dehydrogenase 98.3 1E-06 2.6E-11 60.9 5.6 194 31-244 499-708 (955)
325 pfam02347 GDC-P Glycine cleava 98.3 1E-05 2.6E-10 54.9 9.8 274 16-319 49-371 (429)
326 KOG1383 consensus 98.2 1.2E-06 3.1E-11 60.5 3.8 240 70-326 118-388 (491)
327 KOG2467 consensus 98.2 6E-05 1.5E-09 50.2 11.8 319 16-377 28-399 (477)
328 KOG1402 consensus 98.2 2.3E-06 5.9E-11 58.8 4.2 221 153-397 195-426 (427)
329 TIGR02006 IscS cysteine desulf 98.1 5.8E-07 1.5E-11 62.4 1.0 320 43-400 13-381 (404)
330 cd00611 PSAT_like Phosphoserin 98.1 3.3E-05 8.4E-10 51.8 9.4 318 34-395 1-353 (355)
331 TIGR01437 selA_rel pyridoxal p 98.1 5.6E-06 1.4E-10 56.5 5.5 328 31-398 9-389 (391)
332 TIGR02617 tnaA_trp_ase tryptop 98.0 6E-05 1.5E-09 50.2 8.5 327 49-400 55-447 (468)
333 PRK12462 phosphoserine aminotr 98.0 0.0001 2.7E-09 48.7 9.5 324 31-398 3-362 (364)
334 TIGR00474 selA L-seryl-tRNA se 97.8 3.5E-05 8.8E-10 51.7 4.8 262 33-314 69-360 (448)
335 TIGR00709 dat 2,4-diaminobutyr 97.8 0.0011 2.9E-08 42.4 12.4 319 47-398 85-438 (445)
336 PRK05355 phosphoserine aminotr 97.8 0.00047 1.2E-08 44.7 10.3 324 32-398 3-358 (360)
337 COG0403 GcvP Glycine cleavage 97.8 8.1E-05 2.1E-09 49.4 6.2 275 18-318 61-385 (450)
338 PRK12566 glycine dehydrogenase 97.7 0.00048 1.2E-08 44.7 10.0 328 16-392 63-438 (954)
339 COG3844 Kynureninase [Amino ac 97.7 0.0014 3.5E-08 41.9 12.3 333 24-399 23-403 (407)
340 PRK03080 phosphoserine aminotr 97.5 0.00095 2.4E-08 42.9 9.2 325 35-399 15-377 (381)
341 COG1932 SerC Phosphoserine ami 97.4 0.0022 5.6E-08 40.7 9.7 326 32-399 5-364 (365)
342 PRK05367 glycine dehydrogenase 97.2 0.0018 4.5E-08 41.3 7.2 324 17-392 65-440 (955)
343 KOG0628 consensus 97.1 0.014 3.5E-07 35.8 11.0 81 128-212 195-279 (511)
344 TIGR00461 gcvP glycine dehydro 97.0 0.00048 1.2E-08 44.7 2.7 160 62-244 538-717 (965)
345 pfam05889 SLA_LP_auto_ag Solub 96.8 0.0004 1E-08 45.2 1.1 301 73-397 57-389 (389)
346 TIGR03531 selenium_SpcS O-phos 96.6 0.00027 6.9E-09 46.2 -1.1 298 74-395 107-443 (444)
347 KOG0629 consensus 95.4 0.032 8.1E-07 33.6 4.9 195 131-335 213-439 (510)
348 TIGR01364 serC_1 phosphoserine 95.1 0.18 4.6E-06 29.0 7.9 332 33-397 1-389 (391)
349 KOG3843 consensus 95.0 0.0048 1.2E-07 38.6 -0.2 348 31-398 6-402 (432)
350 KOG2790 consensus 94.7 0.35 8.9E-06 27.3 10.4 328 31-397 6-367 (370)
351 KOG2040 consensus 94.0 0.39 1E-05 26.9 7.7 163 61-244 568-748 (1001)
352 TIGR02618 tyr_phenol_ly tyrosi 93.9 0.017 4.4E-07 35.2 0.5 336 19-379 17-404 (450)
353 TIGR02104 pulA_typeI pullulana 93.5 0.029 7.3E-07 33.9 1.1 142 96-256 158-314 (655)
354 TIGR02418 acolac_catab acetola 92.0 0.71 1.8E-05 25.4 6.5 110 41-155 181-315 (553)
355 KOG1403 consensus 90.8 1.3 3.3E-05 23.8 6.8 298 45-364 62-403 (452)
356 KOG1405 consensus 86.6 0.55 1.4E-05 26.0 2.6 211 154-399 255-484 (484)
357 TIGR01393 lepA GTP-binding pro 84.6 2.4 6.1E-05 22.2 5.1 77 170-260 276-355 (598)
358 PRK13118 consensus 81.9 1.6 4E-05 23.3 3.2 83 164-267 147-229 (269)
359 pfam00290 Trp_syntA Tryptophan 81.2 1.4 3.6E-05 23.5 2.8 47 14-61 19-68 (258)
360 PRK13116 consensus 81.1 1.6 4E-05 23.3 2.9 38 23-61 37-76 (278)
361 PRK13117 consensus 80.3 1.6 4E-05 23.3 2.8 37 23-60 37-75 (268)
362 CHL00200 trpA tryptophan synth 78.3 3.3 8.4E-05 21.3 3.9 61 1-61 1-74 (263)
363 PRK13119 consensus 78.0 3.6 9.1E-05 21.1 4.0 41 20-60 32-73 (261)
364 PRK13140 consensus 77.0 4.5 0.00012 20.5 4.3 60 1-61 1-73 (257)
365 TIGR02262 benz_CoA_lig benzoat 75.1 2.7 6.8E-05 21.9 2.7 72 314-398 400-487 (520)
366 TIGR02493 PFLA pyruvate format 71.1 8.3 0.00021 18.9 5.3 48 338-400 142-194 (243)
367 PRK13121 consensus 70.8 4.9 0.00012 20.3 3.2 83 164-267 147-229 (265)
368 PRK13137 consensus 69.0 4.1 0.00011 20.7 2.5 37 17-53 10-48 (266)
369 PRK13120 consensus 66.3 6.9 0.00018 19.4 3.2 87 164-271 151-237 (285)
370 PRK13111 trpA tryptophan synth 65.9 6 0.00015 19.7 2.8 48 14-61 19-68 (256)
371 PRK13114 consensus 65.7 5.2 0.00013 20.1 2.5 46 15-61 24-72 (266)
372 PRK13131 consensus 65.6 6.7 0.00017 19.4 3.0 44 15-59 22-68 (257)
373 PRK13139 consensus 65.0 6.6 0.00017 19.5 2.9 38 23-60 36-74 (254)
374 PRK13127 consensus 64.8 6.1 0.00015 19.7 2.7 46 15-61 22-70 (262)
375 PRK13138 consensus 61.3 7.8 0.0002 19.0 2.7 197 20-270 30-230 (264)
376 TIGR01136 cysKM cysteine synth 60.7 3.6 9.2E-05 21.1 0.9 107 67-177 37-151 (315)
377 TIGR02402 trehalose_TreZ malto 59.4 2.1 5.3E-05 22.5 -0.5 44 168-215 157-200 (564)
378 PRK13112 consensus 58.9 7.9 0.0002 19.0 2.4 84 163-267 147-230 (279)
379 TIGR01132 pgm phosphoglucomuta 58.3 3.2 8.1E-05 21.4 0.3 81 15-101 60-152 (553)
380 COG2875 CobM Precorrin-4 methy 57.8 15 0.00038 17.3 6.0 58 18-78 63-120 (254)
381 TIGR01138 cysM cysteine syntha 57.7 4.9 0.00013 20.3 1.2 115 63-182 34-156 (300)
382 TIGR01428 HAD_type_II haloacid 57.6 2.5 6.5E-05 22.0 -0.3 113 45-176 83-206 (207)
383 PRK03619 phosphoribosylformylg 57.5 6.3 0.00016 19.6 1.7 58 138-201 133-191 (223)
384 pfam06406 StbA StbA protein. T 57.5 3.7 9.4E-05 21.0 0.5 27 235-263 186-212 (318)
385 COG0329 DapA Dihydrodipicolina 55.5 16 0.00042 17.1 3.8 107 72-206 57-167 (299)
386 COG4050 Uncharacterized protei 55.0 17 0.00042 17.0 4.8 42 348-400 107-148 (152)
387 pfam09885 DUF2112 Uncharacteri 54.6 17 0.00043 17.0 5.0 42 347-399 102-143 (143)
388 TIGR01814 kynureninase kynuren 53.6 2.9 7.5E-05 21.6 -0.5 164 31-208 37-233 (444)
389 TIGR02311 HpaI 2,4-dihydroxyhe 53.4 11 0.00029 18.0 2.5 20 376-395 228-247 (249)
390 TIGR03271 methan_mark_5 putati 53.1 18 0.00045 16.9 5.0 42 347-399 101-142 (142)
391 TIGR00674 dapA dihydrodipicoli 51.7 2.9 7.5E-05 21.6 -0.8 115 61-204 41-160 (288)
392 cd06562 GH20_HexA_HexB-like Be 50.2 3.4 8.8E-05 21.2 -0.6 26 15-40 16-41 (348)
393 PRK13129 consensus 48.3 21 0.00054 16.4 5.7 38 22-60 38-77 (267)
394 pfam08885 GSCFA GSCFA family. 46.6 16 0.0004 17.2 2.3 82 23-106 15-117 (251)
395 PRK11057 ATP-dependent DNA hel 46.0 8.6 0.00022 18.8 0.9 11 183-193 246-256 (607)
396 TIGR01214 rmlD dTDP-4-dehydror 45.2 6.1 0.00015 19.7 0.0 130 108-265 16-185 (317)
397 cd06563 GH20_chitobiase-like T 44.5 5.4 0.00014 20.0 -0.3 25 16-40 17-41 (357)
398 KOG1256 consensus 44.2 25 0.00063 16.0 3.6 93 167-275 259-358 (691)
399 cd04913 ACT_AKii-LysC-BS-like_ 44.1 25 0.00063 16.0 4.5 50 349-399 18-68 (75)
400 TIGR01591 Fdh-alpha formate de 43.9 12 0.0003 18.0 1.3 56 143-204 378-433 (694)
401 TIGR02397 dnaX_nterm DNA polym 42.6 9.9 0.00025 18.4 0.8 39 47-87 20-62 (363)
402 TIGR01991 HscA Fe-S protein as 40.9 28 0.00071 15.7 3.0 26 70-95 352-377 (628)
403 PRK09375 quinolinate synthetas 40.7 28 0.00071 15.7 3.7 50 71-124 46-100 (323)
404 cd06570 GH20_chitobiase-like_1 40.2 6.2 0.00016 19.6 -0.6 26 15-40 16-41 (311)
405 cd02742 GH20_hexosaminidase Be 39.1 6.6 0.00017 19.5 -0.6 26 14-39 13-38 (303)
406 TIGR02727 MTHFS_bact 5,10-meth 39.0 21 0.00054 16.4 2.0 10 244-253 129-138 (183)
407 PRK04210 phosphoenolpyruvate c 38.8 26 0.00066 15.9 2.4 22 378-399 568-589 (610)
408 PRK08265 short chain dehydroge 37.9 0.72 1.8E-05 25.3 -5.6 143 92-257 6-157 (261)
409 cd06564 GH20_DspB_LnbB-like Gl 37.8 8.6 0.00022 18.8 -0.1 26 15-40 15-40 (326)
410 smart00732 YqgFc Likely ribonu 37.3 11 0.00029 18.1 0.4 57 150-207 36-94 (99)
411 PRK05340 UDP-2,3-diacylglucosa 37.2 27 0.0007 15.7 2.4 91 31-132 40-132 (240)
412 PRK13113 consensus 36.8 32 0.00082 15.3 5.7 82 164-266 147-228 (263)
413 PRK11761 cysM cysteine synthas 36.6 24 0.0006 16.1 1.9 111 63-178 34-151 (296)
414 TIGR02102 pullulan_Gpos pullul 36.4 17 0.00044 17.0 1.2 36 168-207 561-596 (1164)
415 COG0031 CysK Cysteine synthase 35.8 18 0.00047 16.8 1.3 112 66-180 36-155 (300)
416 PRK05872 short chain dehydroge 34.4 1.1 2.7E-05 24.3 -5.3 140 92-253 9-157 (296)
417 TIGR00289 TIGR00289 conserved 34.0 17 0.00044 17.0 0.9 97 153-270 74-177 (227)
418 PRK10481 hypothetical protein; 32.3 38 0.00097 14.9 5.5 28 233-261 117-144 (224)
419 cd06569 GH20_Sm-chitobiase-lik 32.2 10 0.00027 18.3 -0.5 27 14-40 19-45 (445)
420 cd02071 MM_CoA_mut_B12_BD meth 31.5 39 0.001 14.8 4.8 70 21-100 18-88 (122)
421 cd06409 PB1_MUG70 The MUG70 pr 31.4 39 0.001 14.8 2.4 43 65-122 18-60 (86)
422 KOG0604 consensus 30.4 29 0.00073 15.6 1.5 17 118-134 218-234 (400)
423 cd01563 Thr-synth_1 Threonine 29.9 29 0.00075 15.5 1.5 135 29-177 11-151 (324)
424 COG5016 Pyruvate/oxaloacetate 29.6 42 0.0011 14.6 4.3 21 19-39 30-50 (472)
425 COG1875 NYN ribonuclease and A 29.4 17 0.00043 17.0 0.2 11 245-255 289-299 (436)
426 KOG0736 consensus 29.3 43 0.0011 14.5 2.8 20 189-208 447-466 (953)
427 PRK10333 putative ligase; Prov 29.2 32 0.00081 15.3 1.6 13 241-253 136-148 (198)
428 cd01561 CBS_like CBS_like: Thi 29.1 30 0.00076 15.5 1.4 80 67-148 28-111 (291)
429 cd06306 PBP1_TorT-like TorT-li 28.9 11 0.00029 18.0 -0.7 73 121-203 10-86 (268)
430 cd06568 GH20_SpHex_like A subg 28.8 13 0.00034 17.6 -0.4 25 16-40 17-41 (329)
431 pfam04704 Zfx_Zfy_act Zfx / Zf 28.7 27 0.0007 15.7 1.2 54 198-262 239-292 (330)
432 cd01539 PBP1_GGBP Periplasmic 28.7 9.5 0.00024 18.5 -1.2 40 154-202 47-86 (303)
433 PRK05717 oxidoreductase; Valid 28.5 5.1 0.00013 20.2 -2.6 141 93-256 11-163 (255)
434 cd01740 GATase1_FGAR_AT Type 1 28.4 37 0.00095 14.9 1.8 60 137-202 140-208 (238)
435 TIGR01368 CPSaseIIsmall carbam 28.1 16 0.00041 17.2 -0.1 24 374-397 241-266 (383)
436 cd00640 Trp-synth-beta_II Tryp 27.9 39 0.00098 14.8 1.8 77 67-145 26-105 (244)
437 PRK09701 D-allose transporter 27.6 12 0.0003 17.9 -0.8 24 154-178 72-95 (311)
438 KOG2192 consensus 27.4 42 0.0011 14.6 2.0 23 154-176 145-167 (390)
439 cd04751 Commd3 COMM_Domain con 27.4 46 0.0012 14.3 3.1 26 375-400 66-91 (95)
440 TIGR02176 pyruv_ox_red pyruvat 27.1 47 0.0012 14.3 3.3 116 31-164 208-347 (1194)
441 cd07564 nitrilases_CHs Nitrila 26.5 29 0.00074 15.6 1.0 19 18-36 21-39 (297)
442 COG2057 AtoA Acyl CoA:acetate/ 26.5 48 0.0012 14.2 2.7 13 30-42 21-33 (225)
443 cd04909 ACT_PDH-BS C-terminal 26.3 48 0.0012 14.2 6.4 57 326-394 4-64 (69)
444 COG1453 Predicted oxidoreducta 26.2 49 0.0012 14.2 3.7 60 25-84 5-77 (391)
445 pfam04002 DUF2466 Protein of u 25.8 18 0.00045 16.9 -0.2 58 156-220 56-117 (123)
446 COG0061 nadF NAD kinase [Coenz 25.7 17 0.00044 16.9 -0.3 26 90-115 54-79 (281)
447 PRK09525 lacZ beta-D-galactosi 25.6 44 0.0011 14.5 1.8 25 16-40 434-461 (1027)
448 TIGR02440 FadJ fatty oxidation 25.3 50 0.0013 14.1 2.3 29 93-122 273-305 (732)
449 TIGR01873 cas_CT1978 CRISPR-as 24.0 53 0.0014 14.0 4.5 69 45-114 9-79 (91)
450 KOG1252 consensus 23.9 11 0.00029 18.0 -1.5 99 97-201 111-217 (362)
451 pfam07302 AroM AroM protein. T 23.8 54 0.0014 13.9 5.7 28 233-261 114-141 (221)
452 TIGR02204 MsbA_rel ABC transpo 23.3 45 0.0011 14.4 1.5 10 152-161 407-416 (576)
453 PRK10717 cysteine synthase A; 23.2 53 0.0014 14.0 1.9 80 64-145 36-119 (334)
454 PRK12809 putative oxidoreducta 23.1 55 0.0014 13.8 4.3 49 70-120 283-338 (639)
455 TIGR02315 ABC_phnC phosphonate 23.0 25 0.00065 15.9 0.2 25 99-124 13-37 (253)
456 TIGR00715 precor6x_red precorr 22.8 28 0.00071 15.7 0.3 13 388-400 247-259 (260)
457 cd05213 NAD_bind_Glutamyl_tRNA 22.6 28 0.00071 15.7 0.3 40 72-112 62-101 (311)
458 TIGR00877 purD phosphoribosyla 22.4 57 0.0015 13.8 3.9 26 375-400 417-443 (459)
459 COG3458 Acetyl esterase (deace 22.1 35 0.0009 15.0 0.8 10 229-239 176-185 (321)
460 TIGR02177 PorB_KorB 2-oxoacid: 21.7 59 0.0015 13.7 3.0 60 63-142 2-61 (302)
461 PRK12564 carbamoyl phosphate s 21.6 28 0.00071 15.7 0.1 11 167-177 215-226 (355)
462 KOG3220 consensus 21.5 6.5 0.00017 19.5 -3.1 79 120-214 38-120 (225)
463 TIGR01737 FGAM_synth_I phospho 21.5 60 0.0015 13.6 1.9 136 178-326 10-176 (264)
464 KOG2928 consensus 21.1 36 0.00091 15.0 0.6 53 165-219 327-381 (518)
465 COG0296 GlgB 1,4-alpha-glucan 20.9 22 0.00055 16.3 -0.5 31 182-213 212-242 (628)
466 pfam02662 FlpD Methyl-viologen 20.8 19 0.00048 16.7 -0.9 40 152-191 40-84 (124)
467 PRK10748 flavin mononucleotide 20.5 39 0.001 14.8 0.7 12 161-172 125-136 (238)
468 COG0159 TrpA Tryptophan syntha 20.4 63 0.0016 13.5 5.7 83 163-266 146-228 (265)
469 pfam00728 Glyco_hydro_20 Glyco 20.3 23 0.00058 16.2 -0.5 25 15-39 16-40 (335)
470 TIGR00699 GABAtrns_euk 4-amino 20.1 20 0.0005 16.6 -0.9 176 140-332 221-419 (469)
No 1
>PRK06507 consensus
Probab=100.00 E-value=0 Score=716.50 Aligned_cols=400 Identities=49% Similarity=0.853 Sum_probs=384.9
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|+.+|+|++.+++|+++.+.+++++++++|+|||+|++|+||||+|+.+++++.+++.++.++|+++.|.|+||++||+|
T Consensus 1 m~~~~~r~~~~~~s~~~~i~~~a~~l~~~G~~vi~L~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LReaia~~ 80 (400)
T PRK06507 1 MPSIADRLKNVDISASAAMTQRARELRAEGIKVVSLSSGEPDFPTPAHAIEAAHAAALAGDTKYPPMDGTPALKAAIQRK 80 (400)
T ss_pred CHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 91688998618968899999999999977997377789388998889999999999745899879987849999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|++++||+|++|+|++++|+++++++++|||+|++++|+|+.|...++.+|++++++++.++++|.+|+++|+++
T Consensus 81 ~~~~~g~~~~p~~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~~~~~~~g~~~v~v~l~~~~g~~~d~~~le~~ 160 (400)
T PRK06507 81 FKRENNLDYDPSEIVVSNGGKQVIFNAMMATCNPGDEVVIPAPSWVSYADIVKLAGGVPVAVPCREETGFKLRPEDLEAA 160 (400)
T ss_pred HHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99984899982438981782999999999966999989990587740579999819915997567011764169999974
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|+|++||||||||.+|+++++++|+++|.++.+++||+||+|++++|++.++.|+.++.+++.+++|+++||||+
T Consensus 161 ~~~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~ 240 (400)
T PRK06507 161 ITPRTKWLFLNFPNNPTGAACTRAEMAAIAEVMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVSKA 240 (400)
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCCCC
T ss_conf 67566499974992931288647799999986653168214056642441208977887888585645535898335444
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++|+++++.+.+++++..++++++.|.+++.+|+.+++|++++++.|++||+++.+.|++++|+++..|
T Consensus 241 ~~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~~L~~~~g~~~~~P 320 (400)
T PRK06507 241 YAMTGWRLGFCGGPKELIKAMSNVNGQATGGIATLAQAAAAAALDGPQDLLKERAAIYRERRDFVVEKLAEIPGLTCHKP 320 (400)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 46765104877487999999999986524765439999999998497777789999999999999999984789956789
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|+++++.............+|++|+.+|++++||+++||+.||.++||||+|+.++++|++|++||++|+++||
T Consensus 321 ~G~fy~~~~~~~~~~~~~~~~~~~~~d~~f~~~Ll~e~gV~v~PG~~FG~~~~vRis~a~~~~~l~eal~Rl~~f~~~lR 400 (400)
T PRK06507 321 EGAFYIYPNIAGLIGKTSKGGRRLETDEDFVMALLEEQHVATVQGAAYGMSPYFRLSYATDMESLGEGCARIAQFCEDLR 400 (400)
T ss_pred CEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 81479977540102334534566788899999999858999977874489983999964999999999999999999649
No 2
>PRK07543 consensus
Probab=100.00 E-value=0 Score=717.99 Aligned_cols=400 Identities=61% Similarity=1.044 Sum_probs=386.4
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|+++|+|+.+++||.+++|.+++++++++|+|||+||+|+||||+|+.|++|+.++++++.++|+++.|.++||++||+|
T Consensus 1 m~~~~~r~~~~~~~~~~~i~~~~~~~~~~G~dii~l~~G~pdf~~p~~i~~a~~~al~~~~~~Y~~~~G~~eLR~aia~~ 80 (400)
T PRK07543 1 MAFLADALSRVKPSATIAVTQKARELKAAGRDVIGLGAGEPDFDTPDNIKQAAIAAINAGKTKYTAVDGIPELKQAICAK 80 (400)
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94688998748945999999999999977998078999799999799999999999845999898998809999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|++++||+|++|+|++++|++++.++++|||+|++++|+|+.|...+.+.|+++++++++.+++|.+|+|+|+++
T Consensus 81 ~~~~~g~~~~pd~V~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~ 160 (400)
T PRK07543 81 FKRENGLDYKPEQVIVGTGGKQILYNALMATLNPGDEVIIPAPYWVSYPEMVALAGGTPVFVETTAEFGFKLTPEALEAA 160 (400)
T ss_pred HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99984899880428992782699999999857999989982786655368999808835995246333754384778974
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.++|++++++|+++|+++.+++||+||+|++++|++.++.++.++.+++++++|+++||||+
T Consensus 161 i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~~~~~~~v~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~ 240 (400)
T PRK07543 161 ITPKTKWFIFNSPSNPTGAAYTRAELKALTDVLVKHPHVWVLTDDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKA 240 (400)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHH
T ss_conf 78667199987998988837641678999998887538603131245664148978899678290221034203774052
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++|+++++.+.++++...++++++.|.+++++|+++++|+++.++.|++||+.+.+.|++++|+++..|
T Consensus 241 ~~~~G~RiG~~~~p~~li~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P 320 (400)
T PRK07543 241 YAMTGWRIGYAAGPAELIKAMDTIQSQSTSNPCSIAQWAAVEALNGPQDFIPANKKIFQERRDLVVSMLNQAKGIDCPTP 320 (400)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 06834304888678999999999997504676609999999998585999999999999999999999986779846799
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|++++++.....+.+....++++|+.+|++++||+++||+.||.++++||||+.++++|++|++||++|+++||
T Consensus 321 ~g~fy~~~~~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~~a~~~e~l~ea~~Rl~~f~~~lr 400 (400)
T PRK07543 321 EGAFYVYPSCAGLIGKTTPSGKVIETDEDFVTELLETEGVAVVHGSAFGLGPNFRISYATSDELLEEACKRIQRFCASLR 400 (400)
T ss_pred CEEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 86689821103232003755676799999999999849999984701089999899975989999999999999999658
No 3
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=709.34 Aligned_cols=397 Identities=51% Similarity=0.859 Sum_probs=382.9
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
.|+|+++++||++.++.+++++++++|+|||+||+|+|||++|+.|++|+.++++++.++|+++.|.++||+|||+||++
T Consensus 6 ~~~r~~~~~~~~~~~~~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~al~~~~~~Y~~~~G~~eLReAia~~~~~ 85 (402)
T PRK06107 6 PAARVSRIKPSPSTAAAARARELRAAGRSIVDLTVGEPDFDTPDHIKAAAVAAIERGETKYTLVNGTPALRKAIIAKMER 85 (402)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 57898509978999999999999977997277889898999789999999999855999996998889999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
++|++++||+|++|+|+++||+++++++++|||+|++++|+|+.|...+...|++++.+|++++++|.+|+|+|++++++
T Consensus 86 ~~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~ 165 (402)
T PRK06107 86 RNGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYWVSYPDMVLANDGTPVIVPCPEEDGFKLTAEALEAAITP 165 (402)
T ss_pred HHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCC
T ss_conf 86899982049986888999999999957999989981686653799999839956736878234875899999974564
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||.+++++++++|+++|+++.+++||+||+|++++|++.+++++.+..+++.+++|+++||||+|++
T Consensus 166 ~tk~iil~~P~NPTG~v~s~~~l~~i~~i~~~~~~i~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~SK~~~~ 245 (402)
T PRK06107 166 RTRWLILNAPSNPTGAAYSRDELRALADVLLRHPHVLVLTDDIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGVSKTYAM 245 (402)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHEECCCCCCCHHHHCHHHHCCCEEECCCCCCCCC
T ss_conf 76699988998989966534899999887752489328622202552218988886898582442254474245345677
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++|+++++++.+++++..+|++++.|.+++.+|+.+++|+.+.++.|++||+.+.+.|++++|+++..|+||
T Consensus 246 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~y~~rrd~~~~~l~~~~g~~~~~P~g~ 325 (402)
T PRK06107 246 TGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVAESVKVYKQRRDYALERLNAIPGLSCLVPDGA 325 (402)
T ss_pred CCCEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE
T ss_conf 66226899858999999999962434689899999999999688478999999999999999998875799676279812
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 89986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
||+|++++++.....+.+....++.+|+.+|++++||+++||+.||.++||||||+.++|.|++|++||+++|++||
T Consensus 326 ~y~~~d~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG~~~~~Ri~fa~~~e~L~ea~~Rl~~al~~lr 402 (402)
T PRK06107 326 FYLYVNCAGLIGKTTPEGKVLETDTDVVLYLLDSVGVAVVQGTAYGLSPYFRMSIATSLETLEAGCDRIERAVAALR 402 (402)
T ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 79813051003445866566568899999999858999977853389982999971999999999999999999649
No 4
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=704.15 Aligned_cols=389 Identities=54% Similarity=0.867 Sum_probs=375.3
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
||.+|+|+..++||+++++.+++++++++|+|||+||+|+|||++|+.|++++.++++++.++|++++|.++||++||+|
T Consensus 1 ~~~~s~r~~~~~~s~~~~~~~~a~~~~~~G~dvi~l~~g~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~LR~aia~~ 80 (389)
T PRK05764 1 MMKLSKRVARVKPSATLAVTAKAKELKAAGRDVISLGAGEPDFDTPEHIKEAAIAALDEGKTKYTPAAGIPELREAIAEK 80 (389)
T ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 94077898518946999999999999977998278889789999889999999999847999998998879999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|++++||||++|+|++++|.++++++++|||+|++++|+|+.|...+..+|++++++|++++++|.+|+++|+++
T Consensus 81 ~~~~~g~~v~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~ 160 (389)
T PRK05764 81 LKRDNGLDYEPDQIIVTTGAKQALYNAFMALLNPGDEVIIPAPYWVSYPEMVKLAGGKPVFVPTGEENGFKLTPEQLEAA 160 (389)
T ss_pred HHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHH
T ss_conf 99986899857978988887999999999958999989985786245899999649865550436220876899999986
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.++|++++++|+++|. ++|++||+||+|++++|++.++.|+.++.++..+++|+++||||+
T Consensus 161 ~~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~~a~-~~~i~ii~DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~ 239 (389)
T PRK05764 161 ITPKTKALILNSPSNPTGAVYSKEELEAIADVAV-EHDIWVLSDEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKA 239 (389)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCC
T ss_conf 3846649998899899886757799999999988-635327510134355568988888778490121143143144302
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++|+++++.+.+++++..++++++.|.+++.+|++.++|++++++.|++||+.+.+.|++++|+++..|
T Consensus 240 ~~lpGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~P 319 (389)
T PRK05764 240 YAMTGWRLGYAAGPKELIKAMSKLQSQSTSNPTSIAQYAAIAALTGPQDAVEEMRKAFEERRDLMVDGLNEIPGLECPKP 319 (389)
T ss_pred CCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 47866036999829999999999985414789869999999998597878999999999999999999984899886478
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|++++.. ..++.+|+++|++++||+++||+.||.++|+||+|+.++++|++|++||++|+++||
T Consensus 320 ~G~~~~~~~~~~~----------~~~~~~~~~~ll~~~gV~~~PG~~Fg~~g~~Rl~fa~~~e~l~ea~~RL~~~l~~lk 389 (389)
T PRK05764 320 EGAFYVFPNVSKG----------ITDSEDFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDIEEALERIERFLKSLK 389 (389)
T ss_pred CCCEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 8107995888888----------999999999999819999980732489984999983889999999999999999758
No 5
>PRK06575 consensus
Probab=100.00 E-value=0 Score=702.20 Aligned_cols=399 Identities=51% Similarity=0.872 Sum_probs=382.8
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|++||+|+.+++||+++++.+++++++++|+|||+||+|+|||++|++|++++.++++++.++|+++.|.++||++||+|
T Consensus 1 m~~~~~r~~~~~~s~~~~i~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~a~~~g~~~Y~~~~G~~~Lr~aia~~ 80 (399)
T PRK06575 1 MSIISTRLNSIKPSPTLAVVKKTLELKKAGVDIIALGAGEPDFDTPDNIKEAAIKAIKDGFTKYTNVEGMPLLKQAIKDK 80 (399)
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 90789998728948999999999999977998377889589999699999999999855999889987839999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|+++++|+|++|+|++++++.+++++++|||+|++++|+|+.|...+.+.|++++.+++..+++|.+|+|+|+++
T Consensus 81 ~~~~~~~~~~~d~i~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~~~~~~~~~~~v~~~~~~e~~~~~d~e~l~~~ 160 (399)
T PRK06575 81 FKRENNIDYELDEIIVSTGGKQVIYNLFMASLDKGDEVIIPAPYWVSYPDMVALSTGTPVFVNCGIENNFKLSAEALERS 160 (399)
T ss_pred HHHHHCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 99985899984319994895289999999865899989974785323589999828856994157554655589999864
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.+|+++++++|+++|.++.+++||+||+|++++|++.+++|+.++.+++.+++|+++|+||+
T Consensus 161 ~~~~~k~iil~nP~NPTG~v~~~eel~~i~~~~~k~~~v~iisDEiY~~~~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~ 240 (399)
T PRK06575 161 ITDKTKWLIINSPSNPTGASYNFEELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTVNGVSKA 240 (399)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCCC
T ss_conf 44476799989999998887889999999999874587378421356664168987741133076542232574142101
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++++++++.+..++++...+++.+.|.+++.+|+..++|+++.+..|++||+++.+.|++++++++..|
T Consensus 241 ~~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~P 320 (399)
T PRK06575 241 YSMTGWRIGYGAGSKALIKAMTIIQSQSTSNPCSISQMAAIEALNGPQDYIKPNALNFQKKRDLALSILKRVKYFECYKP 320 (399)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
T ss_conf 47877233753087999999999996156786689999999998584778999999999999999999864798446179
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 7408998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
+||||+|++++.........+....++.+|+++|++++||+++||+.||.+||||++|+.+.++|+||++||+++|++|
T Consensus 321 ~G~~yl~~~~~~~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~FG~~g~~Rl~~a~~~e~l~ea~~Rl~~a~~~L 399 (399)
T PRK06575 321 EGAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGLEGYFRISYATSMEELEEACIRIERACNVL 399 (399)
T ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 9237995777300154443467678999999999972999998485558998399997398999999999999999749
No 6
>PRK05794 consensus
Probab=100.00 E-value=0 Score=690.11 Aligned_cols=396 Identities=45% Similarity=0.755 Sum_probs=377.4
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
|.+|+|+..++||.++++.+++++++++|+|||+||+|+|||++|+.|++++.++++++.++|+++.|+++||++||+||
T Consensus 1 m~~s~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~iG~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lReaia~~~ 80 (397)
T PRK05794 1 MNLSKKALQIQPSLTLEITAKAKKMKAEGIDVIGFGAGEPDFNTPENIKEAAIDAIEEGYTKYTPASGILELKQAICDKF 80 (397)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 92515856299379999999999999779982789897999997899999999998558998989977299999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|++++||+|++|+|+++||.++++++++|||+|++++|+|+.|...++..|++++++++.++++|.+|++++++++
T Consensus 81 ~~~~g~~v~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~ 160 (397)
T PRK05794 81 KKDNGLNYEPSNIIVSNGAKQSLSNAFEAILNPGDEVIIPVPYWVSYPELVKLADGVPVFVDTKEENDFKYTIEELENAI 160 (397)
T ss_pred HHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 99858999800189878859999999999669989899826876434999997188029965673237777999999753
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|++++||||||||.+||++++++|+++|. ++|++||+||+|++++|++.+++|+.++.++..+++|+++|+||+|
T Consensus 161 ~~~~k~iil~~P~NPtG~v~s~~~l~~l~~la~-~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 239 (397)
T PRK05794 161 TSKTKAIIINSPNNPTGTVYSKEELEEIAKFAK-EHDLFIISDEIYEKLIYGEEEHISIASLSEDAFKRTVVINGMSKAY 239 (397)
T ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH-HCEEEEECHHHHHHHHCCCCCCCCHHHHCHHHHCCCEECCCCCCCC
T ss_conf 335718997899898782435067999997654-1036884333457762589888788995614320332026764444
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 23445444221101226875310012223322222222222234676432222221100000002455304776033027
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
++||||+||+++++++++.+..++++..++++++.|.+++.+|+.+++|+.+.+..|++||+.+.+.|++++|+++..|+
T Consensus 240 ~~~G~RvG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~P~ 319 (397)
T PRK05794 240 AMTGWRIGYAASSLEIIKVMSNIQSHTTSNPNSIAQYASLEALNGDQEQIKNMVEEFKKRRDYMVERINSIKGLSCIKPK 319 (397)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 77652258775589999999999986668976999999999985879999999999999999999998607996760688
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 408998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
||||+|++++...... ..+....++.+|+.+|++++||+++||+.||.++||||+|+.++++|++|++||++|+++|
T Consensus 320 g~~y~~~~~~~~~~~~-~~~~~~~~~~~f~~~ll~~~gV~v~PG~~Fg~~~~vRl~f~~~~e~l~eal~RL~~~l~~L 396 (397)
T PRK05794 320 GAFYVMVNISKVIGKE-IKGNTIKGSIDFANLLLEEENVAVVPGIAFGMDNYIRLSYATSMENIEKGLDRIENFLNKL 396 (397)
T ss_pred EEEEEEEECHHHHCCC-CCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 1369958783442533-4688778999999999984999998185358998399998299999999999999999857
No 7
>PRK06056 consensus
Probab=100.00 E-value=0 Score=686.53 Aligned_cols=397 Identities=38% Similarity=0.652 Sum_probs=375.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHH
Q ss_conf 367889873897589999999999998699726656589749889999999999983887-5699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~ 80 (400)
+.+|+|+..+++|.+++|.+++++++++|+|||+|++|+|||++|+.+++++.+++.++. ++|+++.|+|+||++||+|
T Consensus 5 ~~~s~r~~~~~~s~~~~i~~~a~~l~~~G~~vi~l~~G~Pd~~~p~~~~~a~~~a~~~~~~~~Y~~~~G~~eLR~aia~~ 84 (402)
T PRK06056 5 SRISARIGGIAESATLAVDAKAKALKAAGRPVIGFGAGEPDFPTPDHIVEAAVAACRDPKNHRYTPAAGLPELREAIAAK 84 (402)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 89999986499379999999999999779982788896999998899999999997599888579986819999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|+++++|+|++|+|+++||++++.++++|||+|++++|+|+.|...++.+|+++++++++++++|.+|+|+|+++
T Consensus 85 ~~~~~g~~~~~d~I~iT~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~ 164 (402)
T PRK06056 85 TLRDSGYEVSPSQVLVTNGGKQAVYEAFATLLDPGDEVILPAPYWTTYPEAIRLAGGVPVEVVAGADQGYLVTVEQLEAA 164 (402)
T ss_pred HHHHHCCCCCHHHEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHH
T ss_conf 99983899880237980681499999999857999989981798756199999728970782237333778799999963
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|+|++||||||||.+||.+++++|+++|. ++|++||+||+|++++|++.+++++....+++.+++|+++||||+
T Consensus 165 ~~~~tk~iil~~P~NPtG~v~s~e~l~~l~~la~-~~~i~ii~DEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~SK~ 243 (402)
T PRK06056 165 RTERTKVLLFVSPSNPTGAVYSPEQVRAIGRWAA-EHGIWVISDEIYEHLVYDGAVFTSIPAAVPELADRCIVVNGVAKT 243 (402)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HHCCCEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCCCC
T ss_conf 6668739998489798888742788999999999-714615510443211358988888888654541464475201133
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++++++++.+.+++++..++++.+.|.+++.+|..+++++.++++.|++||+.+.+.|++++|+++..|
T Consensus 244 ~~~~G~R~G~~v~~~~~i~~~~~~~~~~~~~~~~~~q~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~L~~~~~~~~~~P 323 (402)
T PRK06056 244 YAMTGWRVGWMIGPADVIKAATNLQSHATSNVSNVSQRAALAAVSGPLDAVAEMREAFDRRRRTIVRMLNAIPGVSCPTP 323 (402)
T ss_pred CCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 55765307999708999999999986545774229999999998588999999987899999999999986799273588
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|+++++..... .......++.+|+.+|++++||+++||+.||.++|+||||+.++|+|++|++||++||+++|
T Consensus 324 ~G~~y~~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg~~g~~Risfa~~~e~l~eal~RL~~~l~e~k 402 (402)
T PRK06056 324 DGAFYAYPDVKALLGRE-IRGRRPQTSAELAALILEEAEVAVVPGEAFGTPGYLRLSYALGDDDLVEGVRRLQELLSEAK 402 (402)
T ss_pred CEEEEEEEECHHHCCCC-CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 84469977554533632-25899899999999999709899974844489983999970899999999999999999568
No 8
>PRK08069 consensus
Probab=100.00 E-value=0 Score=682.76 Aligned_cols=390 Identities=44% Similarity=0.751 Sum_probs=371.5
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
|.+|+|+.+|+||++++|.+++++++++|+|||+||+|+|||++|+.+++++.++++++.++|+++.|+++||++||+||
T Consensus 1 m~~s~r~~~~~~s~~~~i~~~a~~~~~~g~~vi~l~~G~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~ 80 (390)
T PRK08069 1 MKLAKRVAALTPSATLAITAKAKELKAEGHDVIGLGAGEPDFNTPEHIIDAAHKAMNEGHTKYTPSGGLQALKQEIVKKF 80 (390)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 92515846499379999999999999769984789997899998899999999998548998989967299999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|++++|++|++|+|+++||+++++++++|||+|++++|+|+.|...++++|++++.+++.++++|.+|++++++++
T Consensus 81 ~~~~g~~~~p~~V~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i 160 (390)
T PRK08069 81 KRDQGLAYDPSEIIVCTGAKHALYTLFQVLLDEGDEVIIPTPYWVSYPEQVKLAGGKPVYVEGLEDNDFKITAEQLEEAI 160 (390)
T ss_pred HHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 99868998811189878889999999997279989899806866427999998188048714566678767999999854
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|++++||||||||+++|++++++|+++|.+ ||++||+||+|++++|++.+++|++++.+++.+++|+++|+||+|
T Consensus 161 ~~~~k~iil~~P~NPTG~v~s~e~l~~i~~la~~-~~~~vi~DEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~ 239 (390)
T PRK08069 161 TEKTKAVIINSPSNPTGMIYTKEELAALGEVCLE-HDILIVSDEIYEKLIYGGAEHVSIAQLSNELKEQTIIINGVSKSH 239 (390)
T ss_pred CCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH-CCEEEEEEHHHHHHCCCCCCCCCHHHHCCCCCCCCCEECCCHHHC
T ss_conf 4368589988996986816550689999999875-630598533236540699898898994954345641003530203
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 23445444221101226875310012223322222222222234676432222221100000002455304776033027
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
++||||+||+++|+++++.+.+++++..++++.+.|.+++.+++..++|++++++.|++||+.+.+.|++++|+++..|+
T Consensus 240 ~~~G~RiG~~~~~~~li~~~~~~~~~~~~~~~~~~q~aa~~a~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~ 319 (390)
T PRK08069 240 SMTGWRIGYAAGNKQIIKAMTNLASHSTSNPTSIAQYGAIAAYAGSQEPVETMRQAFEERLNIIYDKLIQIPGFTCIKPQ 319 (390)
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 77632358876699999999999865357776399999999986886879999999999999999998506688514798
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 4089986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
||||+|+++++.... ....+..+|+.+|++++||+++||+.||.++|+||||+.++++|++|++||++|++
T Consensus 320 Gg~ylw~~~~~~~~~-----~~~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~fa~~~~~l~eal~RL~~~l~ 390 (390)
T PRK08069 320 GAFYLFPNVKEAAAL-----SGFETVDEFVKALLEEEKVALVPGSGFGAPDNVRLSYATSLELLEEAIERIHRFMK 390 (390)
T ss_pred EEEEEEEECCHHHCC-----CCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 038997877311122-----67888999999999859999981876799983899984999999999999999859
No 9
>PRK07310 consensus
Probab=100.00 E-value=0 Score=680.38 Aligned_cols=393 Identities=40% Similarity=0.691 Sum_probs=371.2
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHH
Q ss_conf 3678898738975899999999999986997266565897498899999999999838875-699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~ 80 (400)
..||+|+.+++||.++.|.+++++++++|+|||+||+|+|||++|+.|++|++++++++.+ +|+++.|.++||++|++|
T Consensus 1 ~~~~~r~~~~~~s~~~~i~~~a~~l~~~G~dvi~L~iG~pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lR~Aia~~ 80 (395)
T PRK07310 1 PKLSKRVLEMEESVTLAAGARAKALKAQGRDILSLTLGEPDFVTPKNIQDAAIESIENGRASFYTVASGLPELKAAIATY 80 (395)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 92406867099689999999999999779973776895899998999999999998289888789974739999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|++++||+|++|+|+++||+++++++++|||+|++++|+|+.|...++++|++++.+++.++++|.+|+|+|+++
T Consensus 81 ~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 160 (395)
T PRK07310 81 FENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPYWVSYSDQVKMAEGVPVFVQAKEENHFKVTVEQLEAA 160 (395)
T ss_pred HHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 89987899883209987788999999999974999989983787754699999759989997567445745049999974
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.+|+++++++|+++|. +||++||+||+|++++|++.+++|+.++.+...+++|+++|+||+
T Consensus 161 ~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a~-~~~i~visDEiY~~l~~~g~~~~p~~~~~~~~~~~~i~~~s~SK~ 239 (395)
T PRK07310 161 RTSKTKVVLLNSPSNPTGMIYSAEELRAIGEWAV-EHDILILADDIYGRLVYNGNQFTPISSLSEAIRKQTIVINGVSKT 239 (395)
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH-HCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCCEEEECCCCC
T ss_conf 6589749998999798562663541467765565-268799943652100148988888888412432573588401235
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++++++++.+.+++++..++++++.|.+++.+|+..++|++++++.|++|++.+.+.|++++|+++..|
T Consensus 240 f~~~G~RiG~~v~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P 319 (395)
T PRK07310 240 YAMTGWRVGFAVGEPEIISAMSKIAGQTTSNLTAVSQYAAIEAFTGSQSSVEEMRLAFEERLNIIYPLLAQVPGFEVVKP 319 (395)
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC
T ss_conf 67766548999779999999999986504781389999999999688899999999999999999998730899687269
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|+++++.... ....++.+|+.+|++++||+++||+.||.++||||+|+.+.++|++|++||++|+++-|
T Consensus 320 ~g~~~~w~~~~~~~~~-----~g~~d~~~~~~~ll~~~gV~v~PG~~FG~~~~vRl~~a~~~~~l~eal~RL~~~l~s~~ 394 (395)
T PRK07310 320 QGAFYLFPNVKKAMEM-----KGYTDVTDFTTAILEEVGVALVTGAGFGAPENVRLSYATDLETLKEAVRRLHVFMESNE 394 (395)
T ss_pred CEEEEEEEECCCHHCC-----CCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 8668981666511124-----78898999999999849999988976699998899980999999999999999998777
No 10
>PRK07367 consensus
Probab=100.00 E-value=0 Score=680.93 Aligned_cols=385 Identities=43% Similarity=0.787 Sum_probs=370.0
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+|+|+++++||++++|.+++++++++|+|||+||+|+|||++|+.|++|+.++++++.++|+++.|.|+||++||+||++
T Consensus 1 ~a~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~G~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~ 80 (385)
T PRK07367 1 LAQRVGQVTPSLTLAIAAKAKAMKAEGLDVCSFSAGEPDFDTPAHIKAAAKKALDEGKTRYGPAAGEPALREAIAHKLRR 80 (385)
T ss_pred CCHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 93556508936999999999999977998178989999998789999999999865887779999989999999999999
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
++|+++++|||++|+|+++||.++++++++|||+|++++|+|+.|...++.+|++++.+|++++++|.+|++++++++++
T Consensus 81 ~~g~~~~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~ 160 (385)
T PRK07367 81 ENGLDYQAENILVTNGGKQSLYNLMMALIDPGDEVIIPAPYWLSYPEMVKLAGGTPVIVPTDAATGFKITPEQLRQAITP 160 (385)
T ss_pred HHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCCC
T ss_conf 85899985049990898999999999974899989990698777199999809857992136212767799999973786
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||.+++++++++|+++|. ++|++||+||+|+++.|++.++.|+.++.++..+++|+++||||+|++
T Consensus 161 ~~k~~il~~P~NPTG~v~s~~~l~~l~~~a~-~~~~~iIsDEiY~~l~f~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~ 239 (385)
T PRK07367 161 KTKLLVLNSPSNPTGMVYTPEEIAALAEVIV-EHDLYVVSDEIYEKILYDGAEHLSIGSLGPEIFQRTIISNGFAKAYSM 239 (385)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HCCEEEEECCCCHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCCC
T ss_conf 7749997899798785665788889988887-558699711321121058977778888594202464010010003677
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++++++++.+.+++++..++++++.|.+++.+|++.++|++++++.|++||+.+.+.|++++|+++..|+||
T Consensus 240 ~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~~~P~G~ 319 (385)
T PRK07367 240 TGWRVGYLAGPVELIKAASSIQSHSTSNVCTFAQYGAIAALESPQDCVEEMRQAFAERRQLMLDGLNAIPGLSCPKPEGA 319 (385)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEE
T ss_conf 61248878568999999998542055545789999999999584989999999999999999999983799675588847
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
||+|+++++. ..++.+|+++|++++||+++||+.||.++||||+|+.++++|++|++||++|+++|
T Consensus 320 ~~~w~~l~~~----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~~~~Rl~~a~~~~~l~ea~~RL~~~l~~l 385 (385)
T PRK07367 320 FYVFVDISKT----------GLGSLEFCRQLLEEHHVAAIPGIAFGADDHIRLSYATDLATIEKGLERLERFVRSL 385 (385)
T ss_pred EEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 9997888998----------99999999999996999997587469999399997098999999999999999849
No 11
>PRK08443 consensus
Probab=100.00 E-value=0 Score=671.01 Aligned_cols=386 Identities=44% Similarity=0.769 Sum_probs=364.8
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
|+|+|++.+++|.++++.+++++++++|+|||+||+|+|||++|+.+++++.++++++.++|+++.|.++||++||+||+
T Consensus 1 ~~s~r~~~l~~s~~~~i~~~a~~~~~~g~dvi~l~~G~pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~lr~aia~~~~ 80 (388)
T PRK08443 1 MLSKRIQVLSESITIAISTLAKELKAKGKDILSFSAGEPDFDTPQAIKDAAIKAIEKGFTKYTAVAGIPELLKAIATKLK 80 (388)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 95577524896899999999999985699848898998999879999999999985599988999887999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
+++|++++||+|++|+|+++||.++++++++|||+|++++|+|+.|...+..+|+++++++++++++|.+|+++++++++
T Consensus 81 ~~~g~~~~pe~I~it~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~ 160 (388)
T PRK08443 81 KDNNLDYETNEIITSNGAKHSLFNVFQALIEKGDEVIIPSPYWVTYPELVKYSGGVPVFIETDEENGFKITAEQLKKAIT 160 (388)
T ss_pred HHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCC
T ss_conf 98589988312998688799999999998099998998268744239999980884799865543486779999997478
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||++++++++++|+++| +++|++||+||+|++++|++. +.++..+.++..+++|+++||||+|+
T Consensus 161 ~~~k~iil~~P~NPTG~v~s~~~l~~l~~~a-~~~~~~ii~DE~Y~~l~~~~~-~~~~~~~~~~~~~~~I~i~S~SK~~~ 238 (388)
T PRK08443 161 PKTKVLVLNTPSNPTGSVYSKEELEAIAKVL-KGTDIWVLSDEMYEKLVYDGE-FVSVASVSEDMFKRTITINGLSKSVA 238 (388)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCCCEEECCHHHHHHCCCCC-CCCHHHHHCCCCCCEEEECCCCHHCC
T ss_conf 7873999868989988476447899999986-235756742201243226998-78889972224467899803432005
Q ss_pred CCCCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 344544422110-12268753100122233222222222222346-7643222222110000000245530477603302
Q gi|254780602|r 243 MTGLRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 243 ~~G~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
+||||+||++++ +++++.+.++++...++++++.|.+++.+++. .+.|++++++.|++||+.+.+.|++++|+++..|
T Consensus 239 ~~G~RiG~~~~p~~~l~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~P 318 (388)
T PRK08443 239 MTGWRFGYMASKNKKLIKAMKKLQSQSTSNINSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDAINAIPGLSVYKP 318 (388)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC
T ss_conf 86514699981869999999999744678701799999999985452478999999999999999999874789676168
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||||+|+++++. ..++.+|+.+|++++||+++||+.||.++||||||++++++|+||++||++|++++|
T Consensus 319 ~g~~~~w~~~~~~----------~~d~~~f~~~ll~~~gV~v~PG~~Fg~~g~vRl~~~~~~e~l~ea~~RL~~~l~~~r 388 (388)
T PRK08443 319 DGAFYLFVNIKKI----------EKDSMKFCKKLLEQEGVAVVPGIGFGMEGYFRLSFATSIESIKKGIERIANFVKSYK 388 (388)
T ss_pred CEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 8347997888888----------999999999999819999972743588985999982889999999999999999649
No 12
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=0 Score=669.71 Aligned_cols=388 Identities=27% Similarity=0.405 Sum_probs=365.4
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 9367889873897589999999999998699726656589749889999999999983887-569987789899999999
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~ 79 (400)
||..++|+++|+||++.++.+++++++++|+|||+||+|+|||++|+.|++++.+++.++. ++|++++|.|+||++||+
T Consensus 1 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~Vi~L~iG~Pd~~~P~~i~~a~~~a~~~~~~~~Y~~~~G~p~LReaia~ 80 (406)
T PRK09148 1 MMEEFHRIRRLPPYVFEQVNRAKAAARAAGADIIDLGMGNPDLPTPQHIVDKLCETAGKPRTHRYSASKGIPGLRRAQAA 80 (406)
T ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 97445678638998899999999999867998288989899999789999999999749988878997585999999999
Q ss_pred HHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8642101333322-332334543333222222233223222233332322222222222222222222232221033310
Q gi|254780602|r 80 KFRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLE 158 (400)
Q Consensus 80 ~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (400)
||++++|++++|| +|++|+|++++|.++++++++|||+|++++|+|+.|...+...|++++.++++++++|.+|++++.
T Consensus 81 ~~~~r~g~~~~p~~~Iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y~~~~~~~g~~~~~v~~~~~~~~~~~le~~~ 160 (406)
T PRK09148 81 YYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVVLCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAV 160 (406)
T ss_pred HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHH
T ss_conf 99998589889887399887989999999999669999999807765878999998179158605776433330299999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 00122122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 159 QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 159 ~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
+...+|+|+|++||||||||.+++++++++|+++| +++|++||+||+|++++|++.+++++..+ ++..+++|+++|||
T Consensus 161 ~~~~~ktk~iil~~P~NPTG~v~~~~~l~~l~~~a-~~~~i~visDEiY~~l~~~~~~~~s~~~~-~~~~~~~I~~~s~S 238 (406)
T PRK09148 161 RHSIPKPIALIVNYPSNPTAYVADLDFYKDLVAFA-KKHDIWILSDLAYSEIYFDGNPPPSVLQV-PGAKDVTVEFTSMS 238 (406)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCEEEEECCCCHHHHEECCCCCCCHHHC-CCHHHHHHHHCCCC
T ss_conf 74587644999778999888768999999999875-40548996342253513788767554317-43032211111420
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|+|||||+||+++++++++.+.+++++..+|++++.|.++..+|+++++|++++++.|++||+.+.+.|++. |+++.
T Consensus 239 K~~~m~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~y~~rrd~l~~~L~~~-g~~~~ 317 (406)
T PRK09148 239 KTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMREVYKKRRDVLVESFGRA-GWDIP 317 (406)
T ss_pred HHCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC
T ss_conf 30367553359997599999999999976437887899999999975967899999999999999999988866-97643
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.|+||||+|+++++... ..++.+|+.+|++++||+++||+.||. ++||||+|+.++++|++|++||++|+
T Consensus 318 ~P~G~~y~w~~l~~~~~--------~~~~~~f~~~Ll~~~gV~v~PG~~Fg~~g~~~iRlsfa~~~~~L~eal~Rl~~~l 389 (406)
T PRK09148 318 PPAASMFAWAPIPEAFR--------HLGSLEFSKLLVEKADVAVAPGVGFGEHGEGYVRIALVENEQRIRQAARNIKRFL 389 (406)
T ss_pred CCCEEEEEEEECCCCCC--------CCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 79836999988864347--------8999999999997399999897321889988599997388999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
+++
T Consensus 390 ~~~ 392 (406)
T PRK09148 390 SSA 392 (406)
T ss_pred HCC
T ss_conf 760
No 13
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=666.84 Aligned_cols=385 Identities=23% Similarity=0.367 Sum_probs=363.9
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHH
Q ss_conf 3678898738975899999999999986997266565897498899999999999838875-699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~ 80 (400)
|..|+|+++++||++..+.+++++++++|+|||+|++|+|||++|+.+++++.++++++.+ +|++++|.++||++||+|
T Consensus 6 ~~~~~r~~~~~~~~~~~~~~~a~~~~~~G~~vi~L~iG~Pd~~~P~~v~~a~~~al~~~~~~~Y~~~~G~~~LReaia~~ 85 (394)
T PRK05942 6 ISPADRLQALPPYVFARLDELKARAREQGLDLIDLGMGNPDGAAPQPVIEAAIAALEDPQNHGYPPFEGTASFRQAITDW 85 (394)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 78889975299998999999999998659981888598999988899999999998388888989976859999999999
Q ss_pred HHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 642101333322-3323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 81 FRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
|++++|++++|| +|++|+|++++|.++++++++|||+|++++|+|+.|...+...|+++++++++++++|.+|++++++
T Consensus 86 ~~~~~g~~~~p~~~v~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~ 165 (394)
T PRK05942 86 YHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPE 165 (394)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHH
T ss_conf 99986898898875998888899999999995799898997888867689999985998999970587688779999998
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
++++++|+|++||||||||.+++++++++|+++| ++||++||+||+|++++|++.++.++.++ ++..+++++++||||
T Consensus 166 ~i~~~tk~iil~~P~NPTG~v~~~e~l~~i~~~a-~~~~i~vIsDEiY~~l~~dg~~~~s~~~~-~~~~~~~i~~~S~SK 243 (394)
T PRK05942 166 EVAQQAKILYFNYPSNPTTATAPREFFEEIVAFA-RKYEILLVHDLCYAELAFDGYQPTSLLEI-PGAKDIGVEFHTLSK 243 (394)
T ss_pred HHHCCCCEEEEECCCCCCCHHCCHHHHHHHHHHH-HCCCCEEEECCCCCCEEECCCCCCCHHHC-CCCCCCCEEECCCCC
T ss_conf 6112670899938988101220199999999988-51786797037410025568766557655-465344216603334
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 32234454442211012268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
+|++||||+||+++++++++.+..+++....+++++.|.++..+|+.+++|++++++.|++||+++.+.|+++ |+++.+
T Consensus 244 ~~~~~G~RiG~ii~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~~L~~~-g~~~~~ 322 (394)
T PRK05942 244 TYNMAGWRVGFVVGNRDIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRQRRDFLIQGLGEL-GWDIPP 322 (394)
T ss_pred CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC
T ss_conf 5678774259986799999999999985345767699999999985847789999999999999999989876-967537
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 274089986264102332113322489899999999873979983502289--972899962999999999999999998
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
|+||||+|++++. ..++.+|+.+|++++||+++||+.||. ++||||||+.++++|+||++||++++.
T Consensus 323 p~g~~y~w~~~~~-----------~~~~~~f~~~ll~~~gV~v~PG~~Fg~~g~~~iRlsf~~~~~~l~ea~~Rl~~a~~ 391 (394)
T PRK05942 323 TKATMYLWVPCPV-----------GMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALHRIKQAGI 391 (394)
T ss_pred CCEEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 8858899886899-----------97989999999984999998873117899987999971889999999999999998
Q ss_pred HCC
Q ss_conf 609
Q gi|254780602|r 398 SLQ 400 (400)
Q Consensus 398 ~l~ 400 (400)
++|
T Consensus 392 ry~ 394 (394)
T PRK05942 392 RYQ 394 (394)
T ss_pred HHC
T ss_conf 529
No 14
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=0 Score=659.70 Aligned_cols=381 Identities=25% Similarity=0.388 Sum_probs=357.2
Q ss_pred CHH-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHH
Q ss_conf 936-7889873897589999999999998699726656589749889999999999983887-56998778989999999
Q gi|254780602|r 1 MVF-ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIV 78 (400)
Q Consensus 1 m~~-~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia 78 (400)
|.+ +|+|++++++|.+.++.+++++++++|+|||+|++|+||||+|++|++|++++++++. ++|++++|+++||++||
T Consensus 1 m~~~~s~r~~~~~~~~~~~i~~~~~~~~~~G~~vi~l~~G~Pd~~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia 80 (389)
T PRK08068 1 MEFEPSKLLKQLPKQFFASLVAKVNKKVAEGHDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAA 80 (389)
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99706789764896789999999999996799918999988999989999999999973876788899858099999999
Q ss_pred HHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 98642101333322-33233454333322222223322322223333232222222222222222222223222103331
Q gi|254780602|r 79 EKFRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKL 157 (400)
Q Consensus 79 ~~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (400)
+||++++|++++|| +|++|+|+++||+++++++++|||+|++++|+|+.|...++++|++++.+|++++++|.+|+++|
T Consensus 81 ~~~~~~~g~~~~p~~eI~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~~~~~~g~~~~~vpl~~~~~~~~d~e~l 160 (389)
T PRK08068 81 DFYKREYGVTLDPETEVAILFGGKAGLVELPQCLLNPGDTALVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYEKI 160 (389)
T ss_pred HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
T ss_conf 99999868998988809982788999999999966999989980788986499999718756899636667986899999
Q ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 00012212201211354210000123333211122333332011101221100000122332221112333225741465
Q gi|254780602|r 158 EQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~ 237 (400)
+++++++||+|++||||||||.+++.+++++|+++| ++||++||+||+|++++|++.++.++++. ++..+++|+++||
T Consensus 161 ~~~i~~~tk~iil~~P~NPTG~v~~~~~l~~l~~la-~~~~i~visDEiY~~l~~~~~~p~s~l~~-~~~~~~~I~~~S~ 238 (389)
T PRK08068 161 PESVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFA-KKHNIGVVHDFAYGAIGFDGQKPVSFLQT-PGAKDVGIEIYTL 238 (389)
T ss_pred HHHCHHCCEEEEECCCCCCCCHHCCHHHHHHHHHHH-HCCCEEEEECCCCCCEEECCCCCCCCCCC-CCCCCCCEEEECC
T ss_conf 874310465999889979846120599999999987-10777999626521114678766411036-5320134066103
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 44322344544422110122687531001222332222222222223467643222222110000000245530477603
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY 317 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~ 317 (400)
||+|++||||+||+++++++++.+..++++..++++.+.|.+++.+|...++|+.++++.|++||+.+.+.|+++ |+++
T Consensus 239 SK~~~~~G~RiG~~v~~~~~i~~l~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~~~~~l~~~-g~~~ 317 (389)
T PRK08068 239 SKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVQELVARYESRRNAFISACREI-GWEV 317 (389)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE
T ss_conf 565578631179997799999999973025300478499999999986888899999999999999999999975-9760
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 30274089986264102332113322489899999999873979983502289--9728999629999999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
..|+||||+|+++++ ..++.+|+.+|++++||+++||+.||. ++||||||+.++++|++|++||++.
T Consensus 318 ~~P~G~~y~w~~~~~-----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~vRl~fa~~~e~l~ea~~RL~~l 386 (389)
T PRK08068 318 DAPKGSFFAWMPVPK-----------GYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLIDEERLREAINRIAKL 386 (389)
T ss_pred CCCCEEEEEEEECCC-----------CCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 588813599786899-----------989899999999709999987854378996969999838999999999999724
No 15
>PRK07212 consensus
Probab=100.00 E-value=0 Score=659.12 Aligned_cols=377 Identities=42% Similarity=0.713 Sum_probs=356.5
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
||++|+|+.+++||+++++.+++++++++|+|||+||+|+|||++|+.+++|+.++++++.++|+++.|.++||++||+|
T Consensus 1 m~~~s~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~g~pdf~~p~~i~ea~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 80 (378)
T PRK07212 1 MMMLSSRLARVEPSATLAISNKAKELEAEGVDVISLSVGEPDFDTPKHICDAAIDAMDRGKTHYAPSNGIPELREAIAEK 80 (378)
T ss_pred CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 90578888538946999999999999866998379989889999889999999999857999889999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|++++||+|++|+|+++||.++++++++|||+|++++|+|+.|...++.+|++++.+|++.++++. .++++++
T Consensus 81 ~~~~~g~~v~p~~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vpl~~~~~~~--~~~l~~~ 158 (378)
T PRK07212 81 LRTENHIDVTPDDVIVTPGAKQAIYEAMMAVLDDGDEVILLDPAWVSYEACIKFAGGKPVWVPLNPEDFQL--PDDLAEA 158 (378)
T ss_pred HHHHHCCCCCHHEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCC--HHHHHHH
T ss_conf 99984899873319994789999999999847998989981796342568999719969998355567852--8999985
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.+||++++++|+++| ++||++||+||+|.+++|++ +++++.++. +..+++|+++||||+
T Consensus 159 i~~~~k~i~l~~P~NPtG~v~s~~~l~~l~~la-~~~~~~ii~DEiY~~l~~~~-~~~~~~~l~-~~~~~~i~~~S~SK~ 235 (378)
T PRK07212 159 ITDKTKLIVVNSPSNPTGAVFGKESLQGVADLA-VDHDLYVLSDEIYEKIIYGK-EHISLGSLD-GMADRTITINGFSKA 235 (378)
T ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH-HHHCCEECCCCCHHHHHCCC-CCCCHHHCC-CCCCCCCEECCCCCC
T ss_conf 665782999889979989884717688999977-74245013300115440488-777743344-545554033354213
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++|+++++.+.+++++..++++++.|.+++.++++.++|++++++.|++||+.+.+.|+++ |+++..|
T Consensus 236 ~~l~GlRvG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~l~~~~~~~~~~r~~l~~~L~~~-g~~~~~p 314 (378)
T PRK07212 236 YAMTGWRLGYLTAPEEIIKQMGKVQSHSVSSATTFVQYGGVAALKGPQDCVEEMRDEFEARRDILIDGLADM-GLECAPP 314 (378)
T ss_pred CCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC
T ss_conf 677760489897399999999999864557887699999999996877889999999999999999999976-9866268
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 7408998626410233211332248989999999987397998350228997289996299999999999999999
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
+||||+|++++ .++.+|++++++++||+++||+.||.+||+||||+.++++|++|++||+++|
T Consensus 315 ~g~~~~~~~~~-------------~~~~~~~~~ll~~~gV~v~pG~~Fg~~g~iRl~~a~~~e~l~eal~RL~~~L 377 (378)
T PRK07212 315 DGAFYAFPNVD-------------GDDTAVAERLLKDAHVAVTPGSAFGAPGWIRISYATSMERLKEALERLEKVL 377 (378)
T ss_pred CEEEEEEEECC-------------CCHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 81699999789-------------9999999999970989998174459999399998089999999999999985
No 16
>PRK09276 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=658.41 Aligned_cols=380 Identities=28% Similarity=0.493 Sum_probs=359.7
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 9367889873897589999999999998699726656589749889999999999983887-569987789899999999
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~ 79 (400)
||.+|+|+.+++||++++|.+++++++++|+|||+||+|+|||++|+.|++|+.++++++. ++|+++.|.++||++||+
T Consensus 1 m~~~s~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~~G~pd~~~p~~i~~al~~a~~~~~~~~Y~~~~G~~~LReaia~ 80 (385)
T PRK09276 1 MFKLADRIENLPPYLFAEIDKKKAEKIARGVDVISLGIGDPDMPTPKHIVEAMKKAAEDPANHQYPSYEGMLEFRKAVAD 80 (385)
T ss_pred CCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 97567897508988999999999999847998188979989999899999999999808777665997271999999999
Q ss_pred HHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8642101333322-332334543333222222233223222233332322222222222222222222232221033310
Q gi|254780602|r 80 KFRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLE 158 (400)
Q Consensus 80 ~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (400)
||++++|++++|| +|++|+|+++||.++++++++|||+|++++|+|+.|...+...|++++.+|++++++|.+|+|+++
T Consensus 81 ~~~~~~g~~~~p~~~vv~t~Ga~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~ 160 (385)
T PRK09276 81 WYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDYVLVPDPGYPVYAIGTIFAGGEPYFMPLKEENGFLPDLDAIP 160 (385)
T ss_pred HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 99998298768677699878844999999999739999899888866205999998699785068666679857999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 00122122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 159 QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 159 ~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
+++.+++|++++||||||||.+||++++++|+++| ++||++||+||+|++++|++.+++++.++ ++..+++|+++|||
T Consensus 161 ~~~~~~~k~iil~~P~NPTG~v~s~~~l~~l~~la-~~~~i~ii~DEiY~~l~~~~~~~~s~~~~-~~~~~~~i~~~S~S 238 (385)
T PRK09276 161 EDVARKAKLMFINYPNNPTGAVADLEFFEKVVDFA-KKYDIIVCHDNAYSEIAYDGYKPPSFLEV-PGAKDVGIEFHSLS 238 (385)
T ss_pred HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHH-CCCCCEEEEHHHHHHHCCCCCCCCCHHHC-CCCCCCCCEECCCC
T ss_conf 75101672999899989855111188999998763-25575697544422210388888776553-45424430304654
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|++||||+||+++++++++.+.+++++..++++.+.|.++..+++..++|++++++.|++||+.+.+.|+++ |+++.
T Consensus 239 K~~~~~G~RvG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~rr~~~~~~L~~~-g~~~~ 317 (385)
T PRK09276 239 KTYNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAAIAALNGPQDVVEELRAIYQERRDILVEGLNSL-GWEVE 317 (385)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_conf 55688762079997599999999999976557710999999999984869999999999899999999999876-98662
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 02740899862641023321133224898999999998739799835022899--72899962999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~~ 394 (400)
+|+||||+|+++++ ..++.+|+.+|++++||+++||+.||.+ +|+||+|+.++++|+||++||++
T Consensus 318 ~p~gg~~~w~~l~~-----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~a~~~e~l~eal~Rl~k 384 (385)
T PRK09276 318 KPKATFYVWAPVPK-----------GYTSAEFATLLLDKAGIVVTPGNGFGTAGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred CCCEEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHC
T ss_conf 68857799788999-----------98989999999981999998874218899886999975999999999999842
No 17
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=656.06 Aligned_cols=382 Identities=29% Similarity=0.441 Sum_probs=354.2
Q ss_pred CHH-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 936-7889873897589999999999998699726656589749889999999999983887569987789899999999
Q gi|254780602|r 1 MVF-ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~~-~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
|.+ +|+|+++++||.++++.+++++++++|+|||+|++|+|||++|+.|++++.++++++.++|++++|.|+||++||+
T Consensus 1 m~~~~s~r~~~i~~s~~~~i~~~a~~~~~~G~~vi~l~~G~pdf~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~ 80 (387)
T PRK08960 1 MAQRYSRRSRDIEPFHVMALLARANELEAAGHDVIHLEIGEPDFTTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAG 80 (387)
T ss_pred CCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 97178899844996799999999999997799807889948999889999999999985389988998772999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 86421013333223323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 80 KFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
||++++|++++||+|++|+|++++|+++++++++|||+|++++|+|+.|...++..|++++.+|++++++|.+|++.+++
T Consensus 81 ~~~~~~g~~~~~d~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~~~~~~~~~~~~vp~~~~~~~~~~~~~le~ 160 (387)
T PRK08960 81 FYAQRYGLDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDTRYQLTPALVER 160 (387)
T ss_pred HHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 99998589998432898086699999999995699987998178765528999985374499975754477889999997
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
.+++++|++++||||||||.+++++++++|+++| ++|+++||+||+|++++|++.. +++... .+++++++||||
T Consensus 161 ~~~~~~~~iil~nP~NPTG~v~s~~~l~~l~~~a-~~~~~~vI~DEiY~~l~~~~~~-~s~~~~----~~~~i~i~S~SK 234 (387)
T PRK08960 161 HWDSDSVGALVASPANPTGTLLSRDELAALSQAL-KARGGHLVVDEIYHGLTYGVDA-ASVLEV----DDSAFVLNSFSK 234 (387)
T ss_pred HCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCHHHCCCCCC-CCCCCC----CCCEEEEEECCC
T ss_conf 2787872999768989886314689999999987-6239779984461441258986-531136----787799950643
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 322344544422110122687531001222332222222222223467-6432222221100000002455304776033
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
+|++||||+||+++|+++++.+.++++....+++.+.|.+++.+++.. .+++++.+..|++||+++.+.|++++.....
T Consensus 235 ~~~~~G~RiG~~v~p~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~~~~~~ 314 (387)
T PRK08960 235 YFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASSMAQHAALACFEPETIAILEARRAEFQRRRDFLLPALRELGFGIAV 314 (387)
T ss_pred CCCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 25577630589998899999999999854377987999999999621559999999999999999999999975996045
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289---9728999629999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---GPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
.|+||||+|++++.. ..++.+|+.+|++++||+++||+.||. ++||||||+.++++|+||++||++|
T Consensus 315 ~P~G~~y~w~~~~~~----------~~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~~~~~~~l~eal~RL~~~ 384 (387)
T PRK08960 315 EPQGAFYLYADISAF----------GGDAFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAYTQSLPRLQEAVERIARG 384 (387)
T ss_pred CCCEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 898666997888888----------9999999999998699999747220899999989999769999999999999999
Q ss_pred HHH
Q ss_conf 986
Q gi|254780602|r 396 CHS 398 (400)
Q Consensus 396 l~~ 398 (400)
|++
T Consensus 385 Lks 387 (387)
T PRK08960 385 LRS 387 (387)
T ss_pred HCC
T ss_conf 667
No 18
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=0 Score=656.50 Aligned_cols=383 Identities=22% Similarity=0.331 Sum_probs=355.0
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHH
Q ss_conf 367889873897589999999999998699726656589749889999999999983887-5699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~ 80 (400)
|.+|+|++.+++|.+.++.+++++++++|+|||+||+|+|||++|+.+++++++++.++. +||+++.|.|+||++||+|
T Consensus 1 m~~~~r~~~~~~~~~~~~~~~~~~~~~~G~~vi~l~iG~pdf~~P~~i~~a~~~a~~~~~~~gY~~~~G~~~lR~aIa~~ 80 (388)
T PRK07366 1 MQFAQRLQPLQSNVFADMDRAKAQARAAGKEVIDLSLGSSDLPAPAHALEAIAQSLQDPSTHGYLLFHGTLPFREAAAAW 80 (388)
T ss_pred CCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 93555655289489999999999998589984987086899998899999999998097676789875789999999999
Q ss_pred HHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 642101333322-3323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 81 FRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
|++++|++++|| +|++|+|+++|+.++++++++|||+|++++|+|+.|...+.++|++++++|++++++|.+|++++++
T Consensus 81 ~~~~~g~~~~pe~~V~~t~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vpl~~~~~~~~d~~~l~~ 160 (388)
T PRK07366 81 YEQRFGLAVDPETEVLPLIGSQEGTAHLPLALLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPT 160 (388)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHH
T ss_conf 99997898898873998478899999999996699998998258776518999985985799754666798479999987
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCC
Q ss_conf 01221220121135421000012333321112233333201110122110000012233-22211123332257414654
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~S 238 (400)
.+++++|++++||||||||.+||++++++|+++|. +||++||+||+|++++|++..++ ++.... ...+++|+++|||
T Consensus 161 ~i~~~tk~iil~~P~NPTG~v~s~~~l~~i~~~a~-~~~i~lisDEiY~~l~~~~~~~~p~~~~~~-~~~~~~i~~~S~S 238 (388)
T PRK07366 161 EVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQ-QHDLVLVHDFPYVDLVFDGEVEPPSILQAD-PEKSVSIEFFTLS 238 (388)
T ss_pred HHHHCCCEEEECCCCCCCCEEEEHHHHHHHHHHHH-HCCEEEECCCEEEEEEECCCCCCCHHHHCC-CCCCEEEEEECCC
T ss_conf 40422829998589898466803888888999874-055078622021445866876661354257-2206179973353
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|++||||+||+++++++++.+..+++....+.+...|.+++.++..+++|+++.++.|++||+.+.+.|+++ |+.+.
T Consensus 239 K~f~~~G~RiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~L~~~-g~~~~ 317 (388)
T PRK07366 239 KSYNMGGFRIGFAIGNAQLIAALRQIKAVVDFNQYRGILNGAIAALTGPQACVQQTVQIFRQRRDAFINALHRI-GWPVP 317 (388)
T ss_pred CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_conf 25788765189996799999999999875476543999999999996888999999999999999999999977-98750
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.|+||||+|++++... ..++.+|+.+|++++||+++||+.||. ++|+|++|+.++++|+||++||++||
T Consensus 318 ~P~g~~y~w~~l~~~~---------~~~~~ef~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~~a~~~~~l~eal~Rl~~~l 388 (388)
T PRK07366 318 LPEATMYVWAKLPEPW---------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred CCCEEEEEEEECCCCC---------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 7985779978789878---------8998999999998399999766465889998699996299999999999999869
No 19
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=656.16 Aligned_cols=382 Identities=30% Similarity=0.508 Sum_probs=354.3
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
|.+|+|++.++||+++++.+++++++++|++||+|++|+||||+|+.+++|++ ++..+.++|+++.|.++||++||+||
T Consensus 1 M~~s~r~~~l~~s~ir~~~~~a~~~~~~G~~vi~l~iG~Pd~~~P~~~~~a~~-~~~~~~~~Y~~~~G~~~LReaia~~~ 79 (396)
T PRK07568 1 MKISKRVKEMPASPIRKLVPYADAAKKRGIKVYHLNIGQPDIKTPEVFFEAIR-NYDEEVLAYSHSAGIDSLREAFSKYY 79 (396)
T ss_pred CCCCHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHH-HHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 96435845399888999999999999779980888798899987699999998-50737898899867199999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHCC
Q ss_conf 4210133332233233454333322222223322322223333232222222222222222222223222-103331000
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQ-VSPEKLEQA 160 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~-~d~~~l~~~ 160 (400)
++ +|+++++|+|++|+|+++||.++++++++|||+|++++|+|+.|...++.+|+++++++++++++|. +++++++++
T Consensus 80 ~~-~g~~~~~d~I~iT~Ga~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~e~g~~lp~~~~l~~~ 158 (396)
T PRK07568 80 KR-FNIDFDKDEIIVTNGGSEAILFALMAICDPGDEIIVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPKKEEIEKL 158 (396)
T ss_pred HH-HCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCCHHHHHHH
T ss_conf 98-68898822289857806999999997279989899938975325999998498785167672118878969999974
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|+|++||||||||.++|.+++++|+++| ++||++||+||+|++|+|++.+++|+.++ ++..+++|+++||||+
T Consensus 159 ~~~~tk~ii~~~P~NPTG~v~s~~~~~~l~~la-~~~~~~ii~De~Y~~l~y~g~~~~s~~~~-~~~~~~vI~i~S~SK~ 236 (396)
T PRK07568 159 ITDKTKAILISNPGNPTGVVYTKEELRQLADIA-KEHDLFLISDEVYREFTYDGLKYTSAMNI-EGIEDRVIIIDSVSKR 236 (396)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHHCEEEECCCCHHHHEECCCCCCCHHCC-CCCCCCEEEECCCCCC
T ss_conf 776574998589929887540157899999999-87106674245355522089877572005-5654422564045566
Q ss_pred CCCCCCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 22344544422110-12268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r 241 YAMTGLRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 241 ~~~~G~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
|++||||+||++++ +++++.+.++.+ ...|++++.|.++..+|+.+++|+.++++.|++||+.+.+.|++++|+.+..
T Consensus 237 ~~~~G~RiG~~v~~~~~~~~~~~~~~~-~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~y~~rrd~~~~~L~~~~g~~~~~ 315 (396)
T PRK07568 237 YSACGARIGSLITKNKELIKQAMKLCQ-ARLCPPTLEQIGAAALLNTPESYFKEVREEYEKRRDILYEGLNKIPGVVCEK 315 (396)
T ss_pred CCCCHHHEEEEECCCHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC
T ss_conf 578405435553099999999999712-1478977999999999858779999999999999999999997079978678
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-----CCEEEECCCCCCC-----CCEEEEEEECCHHHHHHHH
Q ss_conf 27408998626410233211332248989999999987-----3979983502289-----9728999629999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEI-----EKVAVVQGSSFGH-----GPSIRISYAVSDAILEEAC 389 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~-----~gV~v~pG~~Fg~-----~~~iRis~~~~~e~l~~al 389 (400)
|+||||+|++++ ..++.+|+.+|+++ +||+++||+.|+. .+||||||+.++|+|++|+
T Consensus 316 P~Ggfyl~~~lp------------~~~~~~f~~~ll~~~~~~~~~V~v~PG~~F~~~~g~g~~~iRls~~~~~e~l~ea~ 383 (396)
T PRK07568 316 PTGAFYIIAKLP------------VDDAEDFAKWMLTDFEYNGETVMVAPASGFYATPGLGKDEIRIAYVLEKEDLRRAM 383 (396)
T ss_pred CCEEEEEEEECC------------CCCHHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEECCCHHHHHHHH
T ss_conf 885789999589------------99999999999996212488699977634168998999969999719999999999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998609
Q gi|254780602|r 390 VRIKRFCHSLQ 400 (400)
Q Consensus 390 ~rl~~~l~~l~ 400 (400)
+||+++|+++|
T Consensus 384 ~Rl~~~l~~~~ 394 (396)
T PRK07568 384 EILKKALEAYN 394 (396)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999852
No 20
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=0 Score=652.14 Aligned_cols=385 Identities=29% Similarity=0.457 Sum_probs=341.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897---498899999999999838875699877898999999998
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEP---DFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p---~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
-|+|+++++.+....|.++|++++++|+|||+|++|+| ||++|++|++++.++++++ ++|+++.|.|+||++||+|
T Consensus 6 ~~~~~~~~~y~~~~~v~~kA~~l~~~G~~vi~l~iG~P~~~df~tP~~i~~a~~~a~~~~-~~Yt~~~G~~eLReaIA~~ 84 (404)
T PRK09265 6 KSSKLENVCYDIRGPVLKEAKRLEEEGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPTA-QGYSDSKGLFSARKAIMQY 84 (404)
T ss_pred HHHCCCCCCEEEEHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHH
T ss_conf 102567750572379999999999769973587797999889999899999999874448-9989888889999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
|++++|.+++||+|++|+|++++|+++++++++|||+||+++|+|+.|...+.++|+++++++++++++|.+|+++|+++
T Consensus 85 ~~~~~~~~~~p~~I~vT~Ga~~al~~~~~all~pGDeVlvp~P~Yp~Y~~~~~l~g~~~v~~~~~~~~~f~~d~~~l~~~ 164 (404)
T PRK09265 85 YQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSK 164 (404)
T ss_pred HHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99756999888997875888999999999964998989994688730689999769889998526323778899999976
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
++++||+|++||||||||++|+++++++|+++| ++||++||+||+|++++|++.+|.|+.++.++ ..+|+++||||+
T Consensus 165 i~~~tk~iil~nP~NPTG~v~~~~~l~~l~~~a-~~~~i~visDEiY~~l~~d~~~~~s~~~l~~~--~~~I~~~s~SK~ 241 (404)
T PRK09265 165 ITPRTKAIVIINPNNPTGAVYSKELLEEIVEIA-RQHNLIIFADEIYDKILYDGAEHISIASLAPD--LLCVTFNGLSKA 241 (404)
T ss_pred CCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCEEEEEECCHHHHHCCCCCCCCCHHHCCCC--CEEEEECCCCCC
T ss_conf 574555999868979512002504688999976-31558998501145523699988787881986--059997367745
Q ss_pred CCCCCCCCCCCCC--HHHHHHH----HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHHHHHCC
Q ss_conf 2234454442211--0122687----53100122233222222222222346764322--22221100000002455304
Q gi|254780602|r 241 YAMTGLRIGYAAG--ALSLIKS----MIVLQGQQTSGACSIAQWAAVEALNGPQDFVV--NNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 241 ~~~~G~RiG~~v~--~~~li~~----l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~--~~~~~~~~~r~~~~~~L~~~ 312 (400)
|+|||||+||++. |...+.. +..+ +.+..|++.+.|.++..+|.+.+..-+ ....++.++|+++.+.|+++
T Consensus 242 ~~m~G~RiG~~v~~~p~~~~~~~i~~~~~l-~~~~~c~~~~~Q~a~~~al~~~~~~~~~~~~~~rl~~~Rd~~~~~L~~i 320 (404)
T PRK09265 242 YRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI 320 (404)
T ss_pred CCCCCCCEEEEEECCCHHHHHHHHHHHHHH-HHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 567755279999529199999999999988-5401568828999999997383129999999999999999999999738
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHH
Q ss_conf 7760330274089986264102332113322489899999999873979983502289--97289996299999999999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACV 390 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~ 390 (400)
+|+++.+|+||||+|+++.... ....+|++|+.+||+++||+++||+.||. ++||||||+.++++|++|++
T Consensus 321 ~g~~~~~P~Gafy~f~~l~~~~-------~~~~d~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~~vRlsf~~~~e~l~eal~ 393 (404)
T PRK09265 321 PGVSCVKPKGALYAFPKLDPKV-------YPIHDDEKFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEDAIG 393 (404)
T ss_pred CCCEECCCCEEEEEEEECCCCC-------CCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHH
T ss_conf 9957568983899830877331-------799999999999998699999778502889999899997999999999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998609
Q gi|254780602|r 391 RIKRFCHSLQ 400 (400)
Q Consensus 391 rl~~~l~~l~ 400 (400)
||++||+++|
T Consensus 394 Rl~~~l~~~r 403 (404)
T PRK09265 394 RIGRFLSGYR 403 (404)
T ss_pred HHHHHHHHHC
T ss_conf 9999999840
No 21
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=650.87 Aligned_cols=380 Identities=23% Similarity=0.420 Sum_probs=357.6
Q ss_pred CHH-HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHH
Q ss_conf 936-7889873897589999999999998699726656589749889999999999983887-56998778989999999
Q gi|254780602|r 1 MVF-ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIV 78 (400)
Q Consensus 1 m~~-~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia 78 (400)
|.+ +|+|++++++|+++++.+++++++++|+|||+|++|+|||+||+.+++++.++++++. ++|+ ..|.++||++||
T Consensus 1 m~~~~a~r~~~~~~s~~~el~~~a~~~~~~g~~vI~l~iG~Pd~~~p~~i~~a~~~~~~~~~~~~y~-~~G~~eLReaia 79 (399)
T PRK07681 1 MTYTLATRMKAFQSSIFSELGAYKKEKIAAGHKMIDLSIGNPDMPPADFVREEMVHTANEKESYGYT-LSGIQEFHEAVT 79 (399)
T ss_pred CCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHH
T ss_conf 9865777863289899999999999998679983889898899987899999999997187768889-887399999999
Q ss_pred HHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 98642101333322-33233454333322222223322322223333232222222222222222222223222103331
Q gi|254780602|r 79 EKFRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKL 157 (400)
Q Consensus 79 ~~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (400)
+||++++|++++|| +|++|+|+++||.+++.++++|||+|++++|+|+.|...++..|++++++|++++++|.+|++++
T Consensus 80 ~~~~~~~g~~~~pd~~I~vt~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vpl~~e~~~~~d~~~l 159 (399)
T PRK07681 80 EYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELI 159 (399)
T ss_pred HHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 99999868998988849986888999999999967999989975687442799998769989995057666743689999
Q ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 00012212201211354210000123333211122333332011101221100000122332221112333225741465
Q gi|254780602|r 158 EQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~ 237 (400)
++.+++++|++++||||||||.+++++++++|+++| ++||++||+||+|++++|++.++.|+.++ ++..+++|+++||
T Consensus 160 ~~~i~~~tk~iil~~P~NPTG~v~s~e~l~~l~~la-~~~~i~iIsDEiY~~l~~~~~~~~s~~~~-~~~~~~~I~i~S~ 237 (399)
T PRK07681 160 PEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFA-KKHNIIVVHDFAYAEFYFDGNKPISFLSV-PGAKEVGVEINSL 237 (399)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCEEECCCCCCCHHHC-CCCCCCCCEECCC
T ss_conf 985322555999769989888778999999999985-31363343125511103179887576443-3541345253221
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 44322344544422110122687531001222332222222222223467643222222110000000245530477603
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY 317 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~ 317 (400)
||+|++||||+||+++++++++++..+++...++++.+.|.+++.+|++.++|+++.+..|++||+.+.+.|++. |+++
T Consensus 238 SK~~~~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~r~~~~~rr~~l~~~L~~~-g~~~ 316 (399)
T PRK07681 238 SKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNREIYQERRDTLVDGFRTF-GWNV 316 (399)
T ss_pred CCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEE
T ss_conf 345556532169997099999999999986656745399999999996874789999999999999999999875-9863
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 30274089986264102332113322489899999999873979983502289--9728999629999999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
..|+||||+|+++++ ..++.+|+.+|++++||+++||+.||. ++|||++|+.++++|++|++||+++
T Consensus 317 ~~P~Gg~y~w~~l~~-----------~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~g~g~iRl~f~~~~e~l~eal~RLk~a 385 (399)
T PRK07681 317 DKPAGSMFVWAEIPD-----------GWTSLDFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDKEVLQQVVENIRNS 385 (399)
T ss_pred CCCCCEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 378800289688999-----------999799999999829999988646589998869999718899999999999888
No 22
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=0 Score=650.58 Aligned_cols=384 Identities=32% Similarity=0.518 Sum_probs=352.3
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897---498899999999999838875699877898999999
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEP---DFDMPENVKYAVVRAMERGETKYTAVAGISPLREAI 77 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p---~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~ai 77 (400)
||.+|+|...+ ++.++.|..+|++++++|++||+|++|+| ||+||+.|++++.++++++.++|+++.|.|+||++|
T Consensus 1 ~~~~~~~~~~~-~~~i~~i~~~a~~l~~~G~~vi~l~iG~P~~~df~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~ai 79 (398)
T PRK08363 1 MIRASKRALGV-EYAIRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAI 79 (398)
T ss_pred CCCCCCCCCCC-CEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
T ss_conf 98711021468-85066799999999977997068569899978999899999999999971899889988759999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99864210133332233233454333322222223322322223333232222222222222222222223222103331
Q gi|254780602|r 78 VEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKL 157 (400)
Q Consensus 78 a~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (400)
|+||++++|++++||||++|+|+++||.+++.++++|||+|++++|+|+.|...++.+|++++.+++.++++|.+|+|+|
T Consensus 80 a~~~~~~~g~~~~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlvp~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 159 (398)
T PRK08363 80 VKREKRKNGVDITPDDVRVTNAVTEALQMLFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDI 159 (398)
T ss_pred HHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHH
T ss_conf 99999986899866888985778999999999966998989986675674389999839978436886214896899999
Q ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 00012212201211354210000123333211122333332011101221100000122332221112333225741465
Q gi|254780602|r 158 EQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~ 237 (400)
++.+++++|++++||||||||.+|+++++++|+++| +++|++||+||+|++++|++ ++.++.++.. .+++|+++||
T Consensus 160 ~~~i~~~tk~i~l~nP~NPTG~v~s~~~l~~i~~la-~~~~~~vIsDEiY~~l~~~~-~~~s~~~~~~--~~~vi~i~s~ 235 (398)
T PRK08363 160 RKKITEKTKAIAVINPNNPTGALYDKKTLKEILDIA-GEHDLPVISDEIYDLMTYEG-KHVSPGSLTK--DVPVIVMNGL 235 (398)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECHHHHHHHCCCC-CCCCHHHHCC--CCCEEEEECC
T ss_conf 975311372999879999888865488999999998-75596476133466641699-8779778286--7788998255
Q ss_pred CCCCCCCCCCCCCCC--CHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 443223445444221--1012268753100---12223322222222222234676432222221100000002455304
Q gi|254780602|r 238 SKAYAMTGLRIGYAA--GALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 238 SK~~~~~G~RiG~~v--~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
||+|++||||+||++ +|+..+..+.... .....|++++.|.+++.+++.+++|+++.++.|++||+.+.+.|+++
T Consensus 236 SK~~~~~G~RiG~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~~ 315 (398)
T PRK08363 236 SKVYFATGWRLGYIYFVDPEGKLDEVREALDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEI 315 (398)
T ss_pred CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 03047856136999975838999999999999855064777399999999986687789999999999999999999717
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHH
Q ss_conf 7760330274089986264102332113322489899999999873979983502289--97289996299999999999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACV 390 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~ 390 (400)
+|+++..|+||||+|++++.. ...++.+|+.+|++++||+++||+.||. ++|||+||+.++++|++|++
T Consensus 316 ~g~~~~~P~G~~y~~~~l~~~---------~~~~~~ef~~~ll~e~gV~v~PG~~Fg~~g~g~vRlsf~~~~e~l~eal~ 386 (398)
T PRK08363 316 PGISTTKPQGAFYIFPRIEEG---------PWKDDKEFVLDLLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMD 386 (398)
T ss_pred CCCEECCCCEEEEEEEECCCC---------CCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHH
T ss_conf 995755888788983787888---------99999999999998599999896432889998699998389999999999
Q ss_pred HHHHHHHH
Q ss_conf 99999986
Q gi|254780602|r 391 RIKRFCHS 398 (400)
Q Consensus 391 rl~~~l~~ 398 (400)
||++|+++
T Consensus 387 Rl~~~l~~ 394 (398)
T PRK08363 387 RFEEFMRE 394 (398)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 23
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=648.21 Aligned_cols=386 Identities=22% Similarity=0.313 Sum_probs=350.5
Q ss_pred HHHHH------HHCCCCHHHHHHHHHHHHHHC--CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
Q ss_conf 78898------738975899999999999986--9972665658974988999999999998388756998778989999
Q gi|254780602|r 4 ISNIL------RRVQPSATLVAAQRVRDLRSK--GIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLRE 75 (400)
Q Consensus 4 ~s~~~------~~l~~s~~~~~~~~~~~~~~~--g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~ 75 (400)
+++++ +...+|.+..+.+..++++.+ |.|||+|++|+|||+||++|++|+.++++++.++|++..|+|+||+
T Consensus 9 ~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~DVI~L~iGePDf~tP~~i~~a~~~a~~~~~~~y~~~~G~~eLRe 88 (411)
T PRK06290 9 FAERIGGKSFGKETVIYKFEKIKRAKQAAKKKYPDMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYADNGIQELKE 88 (411)
T ss_pred HHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 99984466778555521089999999999986879987778998999987999999999998379988889876499999
Q ss_pred HHHHHHHHHCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 999986421013-33322-3323345433332222222332232222333323222222222222222222222322210
Q gi|254780602|r 76 AIVEKFRRDNDL-HYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVS 153 (400)
Q Consensus 76 aia~~~~~~~g~-~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d 153 (400)
+||+||++++|+ +++|+ +|++|+|+++||+++++++++|||+||+++|+|+.|...++++|++++++|+.++++|.+|
T Consensus 89 aIa~~~~~~~gv~~~dp~~eIivt~Ga~~al~~~~~all~pGDeVli~~P~yp~Y~~~~~~~G~~~v~vp~~~e~~~~~d 168 (411)
T PRK06290 89 AAARYMEKVYGVKDLDPVTEVIHSIGSKPALAYLPSCFINPGDVTLMTVPGYPVTATHTKWYGGEVYNLPLLEENNFLPD 168 (411)
T ss_pred HHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCC
T ss_conf 99999999719987897767998988899999999996699998998688736589999984998999865666787659
Q ss_pred HHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
Q ss_conf 33310001221220121135421000012333321112233333201110122110000012233222111233322574
Q gi|254780602|r 154 PEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLV 233 (400)
Q Consensus 154 ~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~ 233 (400)
++++++.++++||+|++||||||||.+++++++++|+++| ++++++||+||+|++++|++. +.|+.++ ++..+++|+
T Consensus 169 ~~~l~~~i~~ktK~iilnsP~NPTG~v~s~e~l~~i~~~a-~~~~i~vIsDEiY~~l~yd~~-~~s~~s~-~~~~~~~I~ 245 (411)
T PRK06290 169 LDAIPKDVLEKAKLLYLNYPNNPTGAVATKEFYKEVVDFA-FENDIIVVQDAAYAALTFDGK-PLSFLSV-PGAKEVGVE 245 (411)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCCCEEECHHHHHHHHHHH-HHCCCEEECHHHHHHHEECCC-CCCCCCC-CCCCCEEEE
T ss_conf 5771986255765999889999986142489999999998-642877642353555100897-7761025-677441799
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 14654432234454442211012268753100122233222222222222346764322222211000000024553047
Q gi|254780602|r 234 VNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVP 313 (400)
Q Consensus 234 ~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~ 313 (400)
++||||+|+|||||+||+++++++++.+.+++++..+|++.+.|.+++.+|++ .++.+++++.|++||+++.+.|+++
T Consensus 246 i~S~SK~~~mtGwRiG~~i~~~~li~~~~~i~~~~~~~~~~~~Q~aa~~aL~~-~~~~~~~~~~y~~rrd~l~~~L~~~- 323 (411)
T PRK06290 246 IHSFSKAYNMTGWRLAFVAGNELIVKAFAAVKDNTDSGQFIAIQKAGIYCLRH-PEITEKTRAKYERRLDKMVKILKEV- 323 (411)
T ss_pred ECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf 82577467872245898866999999999999746476149999999999559-8999999999999999999999977-
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHH
Q ss_conf 76033027408998626410233211332248989999999987397998350228997289996299999999999999
Q gi|254780602|r 314 GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIK 393 (400)
Q Consensus 314 g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~ 393 (400)
|+++..|+||||+|+++++... .+....++.+|+.+||+++||+++||.+|| +||||||+.+.++|++|++||+
T Consensus 324 G~~~~~P~GafY~~~~ip~~~~----~~~~~~~~~efa~~LLee~~VavvPG~~fG--~yvRis~~~~~e~leea~~rl~ 397 (411)
T PRK06290 324 GFNAKMPGGTFYLYVKAPKGTK----SGIKFANAEEFSQYLIKEKLISTVPWDDAG--HFLRMSVTFEAKSIEEEDRILN 397 (411)
T ss_pred CCEECCCCEEEEEEEECCCCCC----CCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CEEEEEEECCHHHHHHHHHHHH
T ss_conf 9850688753699687877665----777668999999999984899995655153--5599998388999999999999
Q ss_pred HHHHHCC
Q ss_conf 9998609
Q gi|254780602|r 394 RFCHSLQ 400 (400)
Q Consensus 394 ~~l~~l~ 400 (400)
++.+.|.
T Consensus 398 ~~~~~l~ 404 (411)
T PRK06290 398 EVKRRLS 404 (411)
T ss_pred HHHHHHH
T ss_conf 9999872
No 24
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=0 Score=647.17 Aligned_cols=383 Identities=24% Similarity=0.384 Sum_probs=357.9
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89873897589999999999998699726656589749889999999999983887-56998778989999999986421
Q gi|254780602|r 6 NILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 6 ~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
+|+++|+||++..+.+++++++++|+|||+||+|+|||++|+.|++|+.++++++. ++|++++|.++||++||+||+++
T Consensus 4 ~r~~~l~~~~~~~~~~~~~~~~~~G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~ 83 (395)
T PRK08175 4 TRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDR 83 (395)
T ss_pred CHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 65530999789999999999985799818776978999879999999999976999888899757499999999999998
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 01333322-33233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 85 NDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 85 ~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
+|++++|| +|++|+|+++||.++++++++|||+|++++|+|+.|...+...|++++.+|+.++++|..|++++.+...+
T Consensus 84 ~g~~~~p~~~iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y~~~~~~~g~~~~~vpl~~~~~~~~~le~~~~~~~~ 163 (395)
T PRK08175 84 YDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYP 163 (395)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHCCC
T ss_conf 68987878839988887999999999727998989977877401499999847840785045777604419999972687
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||.+|+++++++|+++| ++||++||+||+|++++|++.+++++.++ ++..+++|+++||||+|++
T Consensus 164 ktk~iiln~P~NPTG~v~s~e~l~~i~~~a-~~~~i~visDEiY~~l~~d~~~~~s~~~~-~~~~~~~i~~~S~SK~f~~ 241 (395)
T PRK08175 164 KPKMMILGFPSNPTAQCVELEFFEKVVALA-KRYDVLVVHDLAYADIVYDGWKAPSIMQV-PGAKDVAVEFFTLSKSYNM 241 (395)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHHCCCCCCCCCHHHC-CCCCCCEEEEEECCCCCCC
T ss_conf 745999889999888757999999999988-86694898235314210288778685447-4564654899503223477
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++++++++.+.+++++...+++++.|.+++.+|+.+++|+.++++.|++||+.+.+.|+++ |+++..|+||
T Consensus 242 ~G~RiG~ii~~~~~i~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~L~~~-g~~~~~P~G~ 320 (395)
T PRK08175 242 AGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKAS 320 (395)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCEE
T ss_conf 754569996499999999999987046876799999999985989999999999999999999999875-9854068966
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 89986264102332113322489899999999873979983502289--97289996299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
||+|+++++.. ...++.+|+.+|++++||+++||+.||. ++|||++|+.++++|+||++||++++++-
T Consensus 321 ~y~w~~~~~~~--------~~~~~~ef~~~ll~e~~V~v~PG~~Fg~~g~~~vRl~~~~~~~~l~eal~Ri~~~~~a~ 390 (395)
T PRK08175 321 MYVWAKIPEPY--------AAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAVRGIKAMFRAD 390 (395)
T ss_pred EEEEEECCCCC--------CCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHC
T ss_conf 69968888876--------78998999999998498999777332779998699997289999999999999999867
No 25
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=0 Score=644.44 Aligned_cols=378 Identities=30% Similarity=0.500 Sum_probs=356.4
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887-56998778989999999986
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~ 81 (400)
.+|+|+++++||.+.++.+++++++++|+|||+||+|+|||++|+.|++|++++++++. ++|+++.|.++||++||+||
T Consensus 1 ~~~~r~~~~~~~~~~~i~~~a~~~~~~G~dvi~l~ig~pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~lreaia~~~ 80 (383)
T TIGR03540 1 KLADRIENLPPYLFAEIDKKKAEKKAEGVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWY 80 (383)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 95458540899899999999999985699858888998999989999999999982888765499878499999999999
Q ss_pred HHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 421013333223-3233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 82 RRDNDLHYTSDQ-IIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 82 ~~~~g~~~~~e~-I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
++++|++++||+ |++|+|+++|+..+++++++|||+|++++|+|+.|...++.+|++++.+|+.++++|.+|+|++++.
T Consensus 81 ~~~~g~~~~p~~~vi~t~Ga~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vpl~~~~~~~~d~e~l~~~ 160 (383)
T TIGR03540 81 KRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPED 160 (383)
T ss_pred HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99868989967669984782599999999966898989987898601699999719858996133577985799999874
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.+|+++++++|+++| +++|++||+||+|++++|++.+++++.++ ++..+++|+++||||+
T Consensus 161 ~~~~~k~iil~~P~NPTG~v~s~~~l~~i~~la-~~~~i~iIsDEiY~~l~~~~~~~~s~~~~-~~~~~~~i~~~S~SK~ 238 (383)
T TIGR03540 161 IAKKAKLMFINYPNNPTGAVAPLKFFKELVEFA-KEYNIIVCHDNAYSEITFDGYKAPSFLEV-DGAKDVGIEFHSLSKT 238 (383)
T ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHCCCCCC-CCCCCEEECCHHHHHHCCCCCCCCCCEEC-CCCCCEEEEEEECCCC
T ss_conf 523774999899989707012102222010012-45540576110255530389999771113-6655425776302354
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
|++||||+||+++++++++.+.+++++..++++.+.|.+++.+++..++|++++++.|++||+.+.+.|+++ |+++..|
T Consensus 239 ~~~~G~RiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~~p 317 (383)
T TIGR03540 239 YNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEKP 317 (383)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECC
T ss_conf 478873489622899999999999755135676599999999985919999999999999999999999876-9877357
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289--972899962999999999999999
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
+||||+|+++++ ..++.+|+.+|++++||+++||+.||. ++|+||+|+.++++|++|++||++
T Consensus 318 ~g~~~~w~~~~~-----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~~~~~e~l~eal~RL~k 382 (383)
T TIGR03540 318 KATFYVWVPVPE-----------GYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred CCEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHC
T ss_conf 805799898999-----------98989999999983999998885328899886999986999999999999844
No 26
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=0 Score=645.55 Aligned_cols=382 Identities=31% Similarity=0.520 Sum_probs=353.1
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
|.+|+|+.+++||.++++.+++++++++|+|||+||+|+|||++|+.|++++.++++++.++|+++.|.++||++|++||
T Consensus 1 m~~a~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~~g~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~ 80 (388)
T PRK07337 1 MRLASRVDAIEPFYVMELAKEAQALERAGRDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAHY 80 (388)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 94514857099429999999999999779980899799899987999999999998469998899988799999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|++++||+|++|+|++++|.++++++++|||+|++++|+|+.|...+...|++++.+|+.++++|.+|++++++++
T Consensus 81 ~~~~g~~i~pe~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~ 160 (388)
T PRK07337 81 ARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTADDVRTHW 160 (388)
T ss_pred HHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHC
T ss_conf 99868999668879848759999999999669999899858873659999997398899940371006778979999857
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|++++||||||||.+|+++++++|+++| ++|+++||+||+|+++.|++.+++++ +. .+++|+++||||+|
T Consensus 161 ~~~tk~iil~nP~NPtG~v~s~~el~~i~~~a-~~~~~~vIsDEiY~~l~~~~~~~~~~-~~----~~~~i~~~S~SK~~ 234 (388)
T PRK07337 161 GERTRGVLLASPSNPTGTSIEPDELRRIVEAV-RARGGFTIVDEIYQGLSYDAAPVSAL-SL----GDDVITINSFSKYF 234 (388)
T ss_pred CCCCEEEEECCCCCCCCEEEEHHHHHHHHHHH-HCCCEEEECCCCCCCCCCCCCCCCCC-CC----CCCEEEECCCCCCC
T ss_conf 86553999789979888562677743355443-14580884576410012489986710-05----78579982665455
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-EE
Q ss_conf 2344544422110122687531001222332222222222223467-643222222110000000245530477603-30
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRY-MI 319 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~-~~ 319 (400)
++||||+||+++|+++++.+.++++....|++.+.|.++.++++.. ..++++.++.|++||+++.+.|+++ |+.+ ..
T Consensus 235 ~~~G~RiG~~i~p~~li~~~~~~~~~~~~~~~~~~q~aa~~~~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~-~~~~~~~ 313 (388)
T PRK07337 235 NMTGWRLGWLVVPPALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVM 313 (388)
T ss_pred CCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCC
T ss_conf 786615699998899999999999854588669999999998482247999999999999999999999975-9964657
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 274089986264102332113322489899999999873979983502289---97289996299999999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
|+||||+|+|++.... ....++.+|+.+|++++||+++||+.||. ++|+|++|++++++|++|++||+++|
T Consensus 314 P~G~~~~w~d~~~~~~------~~~~d~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~iRl~~a~~~~~l~eal~RL~~~l 387 (388)
T PRK07337 314 PDGAFYVYADCGGVAH------PAAGDSAALTFAMLHDAGVVLVPGMDFGPHAPRDYIRLSYATSYSRLEEAVARLGKLF 387 (388)
T ss_pred CCEEEEEEEECHHHCC------CCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 8826699478642169------9999999999999985999997762218999999799997199999999999999970
No 27
>PRK06375 consensus
Probab=100.00 E-value=0 Score=645.85 Aligned_cols=379 Identities=39% Similarity=0.665 Sum_probs=352.1
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
|+|+|+..++||+++.+.+++++++++|+|||+||+|+|||++|+.|++++.++++++.++|++++|.++||++||+||+
T Consensus 1 ~~~~r~~~~~~~~~~~~~~~a~~l~~~G~dvi~l~iG~pdf~~P~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~ 80 (381)
T PRK06375 1 MLSSRLQYINESATVSASNRVEKLRKQGKKLYNFGIGEPDFTTPDNIIKYAFEMAKSGKTHYTPSAGIPELREKIALKLK 80 (381)
T ss_pred CHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 94688621893899999999999997799707738999999868999999999973799888999986999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
+++|+++++|+|++|+ +++++.++++++++|||+|++++|+|+.|...++..|+++++++++ ++|.+|+|+++++++
T Consensus 81 ~~~g~~~~~~~i~vt~-~~~~l~~~~~~l~~pGD~Vii~~P~Y~~y~~~~~~~g~~~v~~~~~--~~~~~d~~~l~~~i~ 157 (381)
T PRK06375 81 SRNNIDAVAKNVLVTP-TKFGINLAMMVILNPGDEVLIPSPYYVSYPDIVKLAGGKPVFVDTD--DDYNIDIDNMRKAVT 157 (381)
T ss_pred HHCCCCCCCCEEEEEC-HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECC--CCCCCCHHHHHHHCC
T ss_conf 8559999957699854-8999999999866999989981888761999999819977642038--877979999996378
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||.+|+++++++|+++| ++||++||+||+|++++|++..+++ .++ ++..+++|+++|+||+|+
T Consensus 158 ~~tk~i~l~nP~NPTG~v~s~e~l~~i~~la-~~~~i~iIsDEiY~~l~~~g~~~~~-~~~-~~~~~~~I~~~S~SK~~~ 234 (381)
T PRK06375 158 PKTRAIIINNPVNPTGKVLSEKEIRELVDFA-LENNLYIVSDEIYEDLIYRGKLFSP-ASI-PEAFDKTITLNGFSKGYA 234 (381)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCEEEEEECCCHHHHCCCCCCCCH-HHH-HHHHCCEEEEEHHHHHHH
T ss_conf 6774999899979889999999999999988-7565899813205755169987785-340-211065799841022433
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++++++++.+.++++...++++.+.|.++..+|++ .++...+++.|++||+.+.+.|++.+++++..|+|
T Consensus 235 ~~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~-~~~~~~~~~~~~~rr~~~~~~l~~~~~~~~~~P~G 313 (381)
T PRK06375 235 MTGWRIGYMVAPEEIVEAANKIQQQTITCASSISQYAALRALDD-DESPKHMREEFEKRRDLVVSILKESDNLHVYEPEG 313 (381)
T ss_pred CCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCE
T ss_conf 14655599983899999999999754467562999999999628-27799999999999999999985189977956781
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 0899862641023321133224898999999998739799835022899--7289996299999999999999999860
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
|||+|++++. ..++.+|+.+|++++||+++||+.||.+ +|+||+|+.++++|++|++||++|+++|
T Consensus 314 ~~~~~~~~~~-----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~~Ri~~a~~~e~l~ea~~RL~~~~~~l 381 (381)
T PRK06375 314 AFYVFPGYES-----------DIKSYKAAENLLENKNVVVTPGSAFGRQGEHHFRISFATSEDIIKEGIERIGKFFKSI 381 (381)
T ss_pred EEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
T ss_conf 4899560799-----------9898999999998599999787354889999799998199999999999999999859
No 28
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=646.03 Aligned_cols=385 Identities=24% Similarity=0.403 Sum_probs=354.9
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8898738975899999999999986997266565897498899999999999838875-699877898999999998642
Q gi|254780602|r 5 SNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 5 s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~ 83 (400)
.+|+++|+++++.++.+++++++++|+|||+|++|+|||++|+.|++|+.++++++.+ ||++++|+|+||++||+||++
T Consensus 7 ~~r~~~l~~~~~~~~~~~~~~~~~~G~~vi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~gY~~~~G~~eLR~aia~~~~~ 86 (403)
T PRK08636 7 FDKIKRLPKYVFAEVNELKMAARRAGEDVIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 15787499988999999999998659986889796899987999999999997699887899974729999999999999
Q ss_pred HCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH----HH
Q ss_conf 101333322-3323345433332222222332232222333323222222222222222222222322210333----10
Q gi|254780602|r 84 DNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEK----LE 158 (400)
Q Consensus 84 ~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~----l~ 158 (400)
++|++++|| +|++|+|+++|+.++++++++|||+|++++|+|+.|...+.+.|++++.+++..+++|.+|.+. ++
T Consensus 87 ~~g~~~~p~~~I~vt~Ga~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~~~~~le 166 (403)
T PRK08636 87 KYNVDLDPDTEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDKFFENLE 166 (403)
T ss_pred HCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCHH
T ss_conf 70999999874999179899999999997799998997788870389999984996899743357774246665202589
Q ss_pred CC---CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 00---122122012113542100001233332111223333320111012211000001223322211123332257414
Q gi|254780602|r 159 QA---ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVN 235 (400)
Q Consensus 159 ~~---i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~ 235 (400)
+. .++|+|+|++||||||||.+|+++++++|+++| +++|++||+||+|++++|++.+++++..+ ++..+++|+++
T Consensus 167 ~~~~~~~~ktk~iiln~P~NPTG~v~s~~~l~~i~~la-~~~~i~visDEiY~~l~~~g~~~~s~~~~-~~~~~~~i~~~ 244 (403)
T PRK08636 167 KALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALA-KKERFYIISDIAYADITFDGYKTPSILEV-EGAKDVAVESY 244 (403)
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHEEECCCCCCCCCCC-CCCCCCCCCCC
T ss_conf 98762688717999899989988788999999999999-86593899626400000179878741027-53001332224
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 65443223445444221101226875310012223322222222222234676432222221100000002455304776
Q gi|254780602|r 236 GVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 236 S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~ 315 (400)
||||+|++||||+||+++++++++.+.+++++...+++++.|.++..+|+..+++++++++.|++||+.+.+.|++. |+
T Consensus 245 s~SK~~~~~G~RiG~ii~~~~li~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~~-g~ 323 (403)
T PRK08636 245 TLSKSYNMAGWRVGFVVGNKKLIGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYEKRRDVLIKSFENA-GW 323 (403)
T ss_pred CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 42002577641289997399999999999986346856899999999983989999999999999999999999865-97
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHH
Q ss_conf 03302740899862641023321133224898999999998739799835022899--7289996299999999999999
Q gi|254780602|r 316 RYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIK 393 (400)
Q Consensus 316 ~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~ 393 (400)
++..|+||||+|+++++... ..++.+|+.+|++++||+++||+.||.. +||||||+.++++|++|++||+
T Consensus 324 ~~~~P~g~~y~w~~l~~~~~--------~~~~~ef~~~ll~~~gV~v~PG~~Fg~~g~~~vRisf~~~~e~l~ea~~Rl~ 395 (403)
T PRK08636 324 ELQKPRASMFVWAKIPEPFR--------HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARNIK 395 (403)
T ss_pred EECCCCCEEEEEEECCCCCC--------CCCHHHHHHHHHHCCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 00378810389787875447--------8998999999997497999887532889998799997189999999999999
Q ss_pred HHHHHCC
Q ss_conf 9998609
Q gi|254780602|r 394 RFCHSLQ 400 (400)
Q Consensus 394 ~~l~~l~ 400 (400)
+||++||
T Consensus 396 ~~l~e~~ 402 (403)
T PRK08636 396 KFLKEFE 402 (403)
T ss_pred HHHHHHC
T ss_conf 9999844
No 29
>PRK06220 consensus
Probab=100.00 E-value=0 Score=641.03 Aligned_cols=376 Identities=36% Similarity=0.597 Sum_probs=353.2
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
-++|+|++.++||+++++.+++++++++|+|||+||+|+||||+|+.|++|++++++++.++|+++.|.++||++||+||
T Consensus 2 ~~ls~r~~~~~~s~~~~i~~~a~~~~~~G~dvi~l~iG~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~~~ 81 (384)
T PRK06220 2 CMISKRVEDIKPFYVMDVLERAQELERQGRDIIHLEVGEPDFPTPECVCEAACAAIERGLTHYTHSLGLPELREAIAEHY 81 (384)
T ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 47899986689659999999999999669980799998899997899999999998549999899978699999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|++++||+|++|+|+++||.++++++++|||+|++++|+|+.|...+...|++++.+|+.++++|.+|+|++++++
T Consensus 82 ~~~~g~~~~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~ 161 (384)
T PRK06220 82 RRRYGVDVDPDQVIVTSGTSPAMLMVFMALLNKGDEVILSDPHYACYPNFVKFLGGTPVFVPVYEEDGFQYRPEAIRACL 161 (384)
T ss_pred HHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 99868998801289868889999999999818999899778988763999998498399922463237677999999747
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|++++||||||||.+|+++++++|+++ +++||+||+|++++|++.++ ++.. ..+++|+++||||+|
T Consensus 162 ~~~~k~i~l~~P~NPtG~v~s~e~l~~l~~~-----~~~vIsDEiY~~l~~~~~~~-s~~~----~~~~~i~~~S~SK~~ 231 (384)
T PRK06220 162 TPRTKAILINSPSNPTGHVLSPERLAGIASL-----GIPIISDEIYHGLVYEGREH-SILE----FTDNAFVLNGFSKLY 231 (384)
T ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHHH-----CCEEEECCCHHHHCCCCCCC-CHHH----CCCCEEEEEECHHHC
T ss_conf 8887399972899987867719999998730-----98897246268641589988-8211----478789997423530
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-EEC
Q ss_conf 2344544422110122687531001222332222222222223467643222222110000000245530477603-302
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY-MIP 320 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~-~~p 320 (400)
++||||+||+++|+++++.+.++++....+++++.|.++..+|++.++|+.++++.|++||+++.+.|+++ |+.+ ..|
T Consensus 232 ~~~G~RiG~~i~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~P 310 (384)
T PRK06220 232 AMTGWRLGYLIVPPSCVRALQKLHQNFFICANSVVQEAGIAALKQAQEDVARMRQIYNERRQYMIKRLREM-GFGIRVEP 310 (384)
T ss_pred CCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC
T ss_conf 78653569999889999999999986157898799999999995839999999999999999999999975-99856389
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289--9728999629999999999999999986
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
+||||+|++++.. ..++.+|+.+|++++||+++||+.||. ++|||++|+.++++|++|++||++||++
T Consensus 311 ~g~~y~~~~~~~~----------~~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~g~iRl~f~~~~e~l~ea~~RL~~~l~~ 380 (384)
T PRK06220 311 TGAFYVLADARHL----------SGDSYALAFDILEEAGVGVTPGIDFGNGGEGYLRFSYANSLENIAEGLDRLEQFLEK 380 (384)
T ss_pred CEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 8526885778878----------999999999999839999977810088999979999709999999999999999998
No 30
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=642.40 Aligned_cols=379 Identities=34% Similarity=0.573 Sum_probs=355.3
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
++|+|++.+++|.++++.+++.+ .+|||+||+|+|||++|+.|++|++++++++.++|+++.|.++||++||+||+
T Consensus 8 ~~a~r~~~~~~s~irel~~~~~~----~~dvI~l~~G~pd~~~p~~i~~a~~~~l~~~~~~Y~~~~G~~~LReaia~~~~ 83 (390)
T PRK08361 8 FMAGRINLIQRSKIRELFERASK----MENVISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYK 83 (390)
T ss_pred HHHHHHHCCCCCHHHHHHHHHHC----CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99899724998879999997737----99938998998999878999999999984688888998887999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
+++|+++++|+|++|+|+++||.++++++++|||+|++++|+|+.|...+...|++++.+|++++++|.+|+++++++++
T Consensus 84 ~~~g~~v~~d~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~~~vpl~~~~~~~~d~~~l~~~~~ 163 (390)
T PRK08361 84 KFYGVDVDVDNVIVTAGAYEATYLAFESLLEQGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENNFQPDPDELLEAIT 163 (390)
T ss_pred HHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC
T ss_conf 98788988232998778999999999996599998998476077799999982997999971587898779999997365
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||.+||++++++|+++| +++|++||+||+|++++|++.++.++.+.. .+++|+++||||+|+
T Consensus 164 ~~~k~ivl~~P~NPTG~v~s~e~l~~l~~la-~~~~i~ii~DE~Y~~l~~~~~~~~~~~~~~---~~~~i~~~S~SK~~~ 239 (390)
T PRK08361 164 KRTRMIVINYPNNPTGAVLDKETAKAIADIA-EDYNIYILSDEPYEHFLYEDAKHYPMIKFA---PDNTILANSFSKTFA 239 (390)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEECCHHHHHHHHCCCCCCCCHHHHC---CCCEEEEECCHHHCC
T ss_conf 4675999889989757786678888999999-863955347065687603887542011313---552899802524147
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 344544422110122687531001222332222222222223467643--222222110000000245530477603302
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDF--VVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~--~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
+||||+||+++|+++++.+.+++++...+++++.|.+++.++...+.| ++++++.|++||+.+.+.|++++|+++..|
T Consensus 240 ~~G~RiG~~v~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~rr~~~~~~l~~~~g~~~~~P 319 (390)
T PRK08361 240 MTGWRLGFVIAPTQVIREMIKLHAYVIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLNKMPHITVFEP 319 (390)
T ss_pred CCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 87423799983899999999997660278768999999999848504899999999999999999999985899686688
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289--9728999629999999999999999986
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
+||||+|+++++. ..++++|+++|++++||+++||+.||. ++||||||+.+++++++|++||++++++
T Consensus 320 ~gg~~lw~~l~~~----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~f~~~~e~l~eal~Rl~~al~~ 389 (390)
T PRK08361 320 KGAFYVFPKIDET----------DMSSEDFSEWLLEKARVVVIPGTAFGKMGEGYVRISYATSKEKLIEAMERMEKALSK 389 (390)
T ss_pred CEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 8666997888888----------989999999999719999988732288999979999729999999999999999971
Q ss_pred C
Q ss_conf 0
Q gi|254780602|r 399 L 399 (400)
Q Consensus 399 l 399 (400)
|
T Consensus 390 L 390 (390)
T PRK08361 390 L 390 (390)
T ss_pred C
T ss_conf 9
No 31
>PRK07778 consensus
Probab=100.00 E-value=0 Score=641.37 Aligned_cols=379 Identities=28% Similarity=0.422 Sum_probs=346.7
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
.+|.| ..|+||.+.++..++++++++|+|||+|++|+||||+|+.|+++++++++.+.++|+++.|+|+||++||+||+
T Consensus 3 ~~~~~-~~~~p~~~~~i~~~a~~~~~~g~dvi~l~iG~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~p~LR~aia~~~~ 81 (386)
T PRK07778 3 RVALR-AGIPPFYVMDVWLAAAERQRTHGDLVNLSAGQPSAGAPEPVRAAAAAALHRNQLGYTVALGIPELREAIAADYQ 81 (386)
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 53334-68998189999999999996699907885989999868999999999863499998999784999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
+++|++++||||++|+|+++||+++++++++|||+|++++|+|+.|...++..|++++++|++++++|.+|.+.+++ +.
T Consensus 82 ~~~g~~~~pe~I~vt~Ga~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~~~~~l~~-~~ 160 (386)
T PRK07778 82 RRHGITVEPDDVVVTTGSSGGFLLAFLACFDVGDRVAMASPGYPCYRNILSALGCEVVEIPCGPDTRFQPTAAMLAE-LD 160 (386)
T ss_pred HHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHH-CC
T ss_conf 98689988554898178799999999996499998998678651079999973982572367744566723889862-58
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|+|++||||||||.+++++++++|+++|. ++|++||+||+|++++|++.++.+.. .+..+++|+++||||+|+
T Consensus 161 ~~~k~iil~~P~NPTG~v~s~~~l~~l~~la~-~~~i~iisDEiY~~l~~~~~~~~~~~---~~~~~~~i~i~S~SK~~~ 236 (386)
T PRK07778 161 PPVRGVIVASPANPTGTVIAPEELAAIASWCE-ASGVRLISDEVYHGLVYEGAPPTSCA---WETSREAVVVNSFSKYYA 236 (386)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH-HCCEEEEECCCHHHHCCCCCCCCCCC---CCCCCCEEEEECCCCCCC
T ss_conf 66439998999898877850799999999985-37879994343253115899986430---024786899930431125
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEEC
Q ss_conf 344544422110122687531001222332222222222223467-64322222211000000024553047760-3302
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMIP 320 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~p 320 (400)
+||||+||+++|+++++.+.+++++..+|++.+.|.+++.++... ..+++..++.|++||+.+.+.|+++ |+. +.+|
T Consensus 237 ~~G~RiG~~~~p~~l~~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~p~ 315 (386)
T PRK07778 237 MTGWRLGWLLVPTELRRAVDRLTGNFTICPPALSQYAAVAAFTPEATAEADGHLAHYAENRRLLLDGLRAL-GITRLAPA 315 (386)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEECCC
T ss_conf 67760699984899999999998507678778999999999560128999999999999999999999975-99541799
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289---972899962999999999999999998
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---GPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
+||||+|++++.. ..++.+|+.+|++++||+++||+.||. ++||||||+.++++|++|++||++|++
T Consensus 316 ~G~fy~~~~~~~~----------~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRlsf~~~~~~l~eal~RL~~~l~ 385 (386)
T PRK07778 316 DGAFYVYADVSHL----------TDDSLAFCSKLLADTGVAIAPGIDFDTVRGNSFVRLSFAGPTADIEEALRRIGSWLR 385 (386)
T ss_pred CEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHC
T ss_conf 8478997889888----------999999999999839999975856688999996999983989999999999999965
Q ss_pred H
Q ss_conf 6
Q gi|254780602|r 398 S 398 (400)
Q Consensus 398 ~ 398 (400)
+
T Consensus 386 s 386 (386)
T PRK07778 386 S 386 (386)
T ss_pred C
T ss_conf 9
No 32
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=0 Score=638.01 Aligned_cols=380 Identities=36% Similarity=0.593 Sum_probs=352.5
Q ss_pred CH-HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 93-67889873897589999999999998699726656589749889999999999983887569987789899999999
Q gi|254780602|r 1 MV-FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~-~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
|. ++|+|++++++|+++++.+.++ .+.|||+||+|+|||++|+.|++|+.++++++.++|+++.|.++||++||+
T Consensus 1 m~~~~~~r~~~~~~s~ir~~~~~~~----~~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lreaia~ 76 (387)
T PRK07683 1 MEHLINPRVKDIQISGIRQFSNLVQ----NYDNLISLTIGQPDFPTPSHVKEAAKRAIDENYTSYTHNAGLLELRKAACN 76 (387)
T ss_pred CHHHHHHHHHHCCCCHHHHHHHHHH----CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 9378889985189888999999986----799918999998999978999999999985799988999887999999999
Q ss_pred HHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8642101333322-332334543333222222233223222233332322222222222222222222232221033310
Q gi|254780602|r 80 KFRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLE 158 (400)
Q Consensus 80 ~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (400)
||++++|+++++| +|++|+|+++||.++++++++|||+|++++|+|+.|...++.+|++++.+++++ ++|.+|+++++
T Consensus 77 ~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~v~~~~-~~~~~d~~~le 155 (387)
T PRK07683 77 FVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGATPVFIDTRE-TGFRLTAEALE 155 (387)
T ss_pred HHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCC-CCCCCCHHHHH
T ss_conf 99998589989887599927829999999999769999899837876656999997087235368786-78878999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 00122122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 159 QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 159 ~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
+++++++|++++||||||||.+||.+++++|+++| +++|++||+||+|++++|++ ++.++.++ ++..+++|+++|+|
T Consensus 156 ~~~~~~~k~iil~~P~NPtG~v~s~e~l~~i~~la-~~~~i~ii~DEiY~~l~~~~-~~~s~~~~-~~~~~~~i~~~S~S 232 (387)
T PRK07683 156 NAITEKTRCVVLPYPSNPTGVTLSKEELKDIANVL-KDKNIFVLSDEIYSELVYDQ-PHTSIAHF-PEMREKTIVINGLS 232 (387)
T ss_pred HHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCCCEEECCCCHHHHHCCC-CCCCHHHC-CCCCCEEEEEECCC
T ss_conf 73552575786479959897887899999999976-13694475465135540699-87764334-45554036750441
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|++||||+||+++|+++++++.+++++...+++++.|.++..++....++.+.+++.|++||+.+.+.|.+. |+.+.
T Consensus 233 K~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~L~~~-g~~~~ 311 (387)
T PRK07683 233 KSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE 311 (387)
T ss_pred CCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_conf 01367652279997599999999999975657886899999999997698899999999999999999999876-99556
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.|+||||+|++++.. ..++.+|+.+|++++||+++||+.||. ++|+||||+.++++|++|++||++|+
T Consensus 312 ~P~G~~~~w~~~~~~----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~g~~Rlsfa~~~e~l~eal~Rl~~~l 381 (387)
T PRK07683 312 KPTGAFYIFPSIGHF----------TMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEAFL 381 (387)
T ss_pred CCCEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 788127996787888----------9997999999998399999878422889988699997199999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
++.
T Consensus 382 ~~~ 384 (387)
T PRK07683 382 QKK 384 (387)
T ss_pred HHH
T ss_conf 987
No 33
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=641.38 Aligned_cols=381 Identities=26% Similarity=0.438 Sum_probs=353.4
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|.-+|+++.++++|.+.++.+.|+ ++|+|+|++|+|||++|++|++++.++++++.++|+++.|+++||++||+|
T Consensus 1 m~~~n~~~~~~~~~~~~~~~~la~-----~~~~I~L~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LR~aia~~ 75 (387)
T PRK08912 1 MKSLNPVFADLPTTIFEVMSQLAR-----EHGAINLGQGFPDDPGPEDVRRAAADALLDGYNQYPPMMGLPELRQAVAAH 75 (387)
T ss_pred CCCCCCCHHHCCCCHHHHHHHHHC-----CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 977561354479989999999863-----799277369789999889999999999852999898998729999999999
Q ss_pred HHHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 642101333322-3323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 81 FRRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
|++++|++++|+ +|++|+|+++||+++++++++|||+|++++|+|+.|...++.+|++++.++++++ +|.+|.+++++
T Consensus 76 ~~~~~g~~~~p~~~V~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~-~~~~d~~~l~~ 154 (387)
T PRK08912 76 YARFHGLDLDPMTEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDSYLPIIRRAGGVPRLVRLEPP-HWRLPEAALAA 154 (387)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCC-CCCCCHHHHHH
T ss_conf 99986899898872998766899999999996699898999488081179999972988997565587-77889999985
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
++++++|+|++||||||||.+||.+++++|+++| ++||++||+||+|++++|++.++.|+.++ ++..+++|+++||||
T Consensus 155 ~~~~~tk~iil~~P~NPTG~v~s~e~l~~l~~~a-~~~~i~vi~DEiY~~l~~~~~~~~~~~~~-~~~~~~~i~i~S~SK 232 (387)
T PRK08912 155 AFSPRTKAVLLNNPLNPAGKVFPREDLALLAEFC-QRHDAVAICDEVWEHVVFDGRRHIPLMAL-PGMRERTVKIGSAGK 232 (387)
T ss_pred CCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHEEECCCCCCHHHCC-CCCCCCEEEECCCCC
T ss_conf 2788866999899989888568699999999988-65797998026523315678654044406-676673699856777
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 32234454442211012268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
+|+|||||+||+++++++++.+.+++++..++++.+.|.+++.+|...++|++++++.|++||+.+.+.|+++ |+.+.+
T Consensus 233 ~~~m~G~RiG~~~~~~~li~~l~~~~~~~~~~~~~~~Q~a~a~~l~~~~~~~~~~~~~~~~rr~~l~~~L~~~-g~~~~~ 311 (387)
T PRK08912 233 IFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQRAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVLP 311 (387)
T ss_pred EECCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEEC
T ss_conf 5205533279998399999999999875855766999999999973877999999999999999999999976-985627
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 274089986264102332113322489899999999873979983502289----9728999629999999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
|+|+||+|++++... ...++++|+.+|++++||+++||+.|+. .+||||||+.++|+|++|++||++|
T Consensus 312 ~~G~~~~~~~~~~~~--------~~~~~~~f~~~ll~e~gV~~vPG~~F~~~~~~~~~iRlsfa~~~e~l~ea~~RL~~~ 383 (387)
T PRK08912 312 SQGTYFLTVDLAPLG--------LAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAA 383 (387)
T ss_pred CCCEEEEEEECCCCC--------CCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 981589988514558--------998999999999996899998150128999999859999799999999999999999
Q ss_pred HHH
Q ss_conf 986
Q gi|254780602|r 396 CHS 398 (400)
Q Consensus 396 l~~ 398 (400)
+++
T Consensus 384 lk~ 386 (387)
T PRK08912 384 FRG 386 (387)
T ss_pred HHC
T ss_conf 836
No 34
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=640.48 Aligned_cols=377 Identities=29% Similarity=0.417 Sum_probs=350.6
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 88987389758999999999999869972665658974988999999999998388756998778989999999986421
Q gi|254780602|r 5 SNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 5 s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
..+++.+++|.++++.+.++ .+.|||+||+|+|||++|+.|++|+.++++++.++|+++.|.++||++|++||+++
T Consensus 2 ~~~~~~~~~s~ire~~~~~~----~~~dvi~l~vgdpDf~~p~~i~~a~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~~ 77 (382)
T PRK06108 2 RPAVRALPESGIREVANAGR----GREDVLPFWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRL 77 (382)
T ss_pred CCHHHCCCCCHHHHHHHHHC----CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 83031299878999998756----89991788898989998899999999998479983799988699999999999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHCCCCC
Q ss_conf 01333322332334543333222222233223222233332322222222222222222222-23222103331000122
Q gi|254780602|r 85 NDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQ-DDNFQVSPEKLEQAITP 163 (400)
Q Consensus 85 ~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~ 163 (400)
+|+++++|+|++|+|+++||.++++++++|||+|++++|+|+.|...++..|++++.+|++. +++|.+|++++++++++
T Consensus 78 ~g~~v~~d~I~it~G~~~al~~~~~~~~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~~~vpl~~~~~~~~~d~~~le~~~~~ 157 (382)
T PRK06108 78 HGATTPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPAWPNLVAAPKILGARVVCVPLQYGGGGWQLDVDRLLAAITP 157 (382)
T ss_pred HCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 78898668499807899999999999669999899816878656999997388278534566678866799999964575
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 122012113542100001233332111223333320111012211000001223-3222111233322574146544322
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF-SNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~-~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
++|++++||||||||.+||++++++|+++|. +||++||+||+|++++|++.++ +++.+.. +..+++|+++|+||+|+
T Consensus 158 ~~k~iil~~P~NPtG~v~s~e~l~~l~~la~-~~~v~iisDEiY~~l~f~~~~~~ps~~~~~-~~~~~~i~~~S~SK~f~ 235 (382)
T PRK06108 158 RTRALFINSPNNPTGWTASRDDQQAILAHCR-RHGLWIVADEVYERLYYGGGGRAPSFLDIA-EPDDRIIFVNSFSKNWA 235 (382)
T ss_pred CCEEEEECCCCCCCCHHCCHHHHHHHHHHHH-CCCCEEECHHHHHHHCCCCCCCCCHHHHHC-CCCCEEEEEECCCHHCC
T ss_conf 6649998899699662044788999999876-269753533433330138998883466523-66764999804303104
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++|+++++.+.++.++..++++.+.|.+++.+|+++++|++++++.|++||+.+.+.|++++|+++..|+|
T Consensus 236 ~~G~RiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~g 315 (382)
T PRK06108 236 MTGWRLGWLVAPPSLGQDLEKLIEYNTSCVPQFVQRAAVAALDEGEDFVAQLVARLRRARDHLVDALRALPGVEVPKPDG 315 (382)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf 76761799997999999999999870377768999999999968626589999999999999999997379968737882
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 089986264102332113322489899999999873979983502289--9728999629999999999999999986
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
|||+|+++++ ..++.+|+.+|++++||+++||+.||. ++|+||||+.++++|++|++||++|+++
T Consensus 316 ~~y~w~~~~~-----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRl~~a~~~~~l~eal~RL~~~l~k 382 (382)
T PRK06108 316 AMYAFFRLDG-----------ATDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEGVERLRRFLAR 382 (382)
T ss_pred EEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 7999887999-----------999999999999969999987841188999979999629999999999999999667
No 35
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=638.72 Aligned_cols=388 Identities=23% Similarity=0.353 Sum_probs=356.2
Q ss_pred CHHHHHHHHHCCCCHH--HHHHHHHHHHHH--CCCCE----EECCCCCCCC--CCCHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9367889873897589--999999999998--69972----6656589749--889999999999983887569987789
Q gi|254780602|r 1 MVFISNILRRVQPSAT--LVAAQRVRDLRS--KGIDV----LCLTAGEPDF--DMPENVKYAVVRAMERGETKYTAVAGI 70 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~--~~~~~~~~~~~~--~g~~i----i~l~~G~p~~--~~p~~i~~a~~~al~~~~~~Y~~~~G~ 70 (400)
||.+++++.+|..-.. .++.+.++.++. .|.++ |||++|+||| |+|..|.++...+++.+.++|+++.|.
T Consensus 1 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~id~~~G~pD~~~PtP~~i~~~~~~~~~~g~~~Yt~~~G~ 80 (406)
T PRK06207 1 MMSIEAKFAKLGTDNAPGQEVRQSAAGLDALLRGDPLPGRPVDFSHGDVDAHEPTPGSLELFSQGVERGGVQAYTEYRGD 80 (406)
T ss_pred CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 95277999873766561789998887546764589889997237889999999986999999999973899889998672
Q ss_pred HHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----
Q ss_conf 899999999864210133332-233233454333322222223322322223333232222222222222222222----
Q gi|254780602|r 71 SPLREAIVEKFRRDNDLHYTS-DQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQ---- 145 (400)
Q Consensus 71 ~~lR~aia~~~~~~~g~~~~~-e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~---- 145 (400)
|+||+|||+||++++|+++++ |+|++|+|++++|+++++++++|||+|++++|+|+.|...++.+|+++++++++
T Consensus 81 ~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~al~~a~~al~~pGDeViv~~P~y~~y~~~i~~~g~~~vpv~l~~~~~ 160 (406)
T PRK06207 81 LEIRELVAARLAEFTGAPVDARDGLIITPGTQGALFLAVASTVTRGDKVAIVQPDYFANRKLVEFFEGEIVPVQLDYVSV 160 (406)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCC
T ss_conf 99999999999998689999878699858779999999999758998799978987457999998298799985677677
Q ss_pred CCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22322210333100012212201211354210000123333211122333332011101221100000122332221112
Q gi|254780602|r 146 QDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEP 225 (400)
Q Consensus 146 ~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~ 225 (400)
++++|.+|+|+|+++++++||++++||||||||.+||++++++|+++| ++||++||+||+|++++|++.+++++.++ +
T Consensus 161 ~~~~~~~d~d~le~~i~~~tk~iil~nP~NPTG~v~s~e~l~~l~~la-~~~~i~visDEiY~~l~ydg~~~~~~~~~-~ 238 (406)
T PRK06207 161 DETRAGLDLDQLEAAFKAGVRVFLFSNPNNPAGVVYSPEEIAQIAALA-RRYGATVIADQLYSRLRYAGASYTHLRAL-A 238 (406)
T ss_pred CCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHCCHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCCCCCCHHHC-C
T ss_conf 634468999999974544876999889979857213399999999987-55795999964664545589887787663-5
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 33322574146544322344544422110122687531001222332222222222223467643222222110000000
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLC 305 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~ 305 (400)
...+++|+++|+||+|+|||||+||+++++++++++.++++....+++.+.|.++..++++.++|+++.+..++++|+.+
T Consensus 239 ~~~~~~I~~~s~SK~~~m~G~RlG~~~~~~~li~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~R~~l 318 (406)
T PRK06207 239 VDPENVITIMGPSKTESLSGYRLGVAFGSPAIIARMEKLQAIVSLRAAGYCQAVLRTWFDEPPGWMEDRIAQHQAIRDDL 318 (406)
T ss_pred CCCCCEEEEEECHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 77676799751324431225624889789999999999998843684299999999999677999999999999999999
Q ss_pred HHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHH
Q ss_conf 24553047760330274089986264102332113322489899999999873979983502289--9728999629999
Q gi|254780602|r 306 VAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDA 383 (400)
Q Consensus 306 ~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e 383 (400)
.+.|+.++|+++..|+||||+|+++++. ..++.+|++.|++++||+++||+.||. .+||||||+.+++
T Consensus 319 ~~~l~~~~g~~~~~P~gg~yl~~~l~~~----------~~~~~~f~~~Ll~e~gVav~PG~~FG~~~~~~vRlsfa~~~e 388 (406)
T PRK06207 319 IRVLRGIDGVFARAPEAGSYLFPRLPKL----------AVGLADFVKILRLQAGVVVTPGTEFSPHTADSIRLNFSQDHA 388 (406)
T ss_pred HHHHHCCCCCEECCCCCEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHH
T ss_conf 9998508995745899148996888888----------999999999999858999988656589998979999739899
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998609
Q gi|254780602|r 384 ILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 384 ~l~~al~rl~~~l~~l~ 400 (400)
+|++|++||++|++++|
T Consensus 389 ~l~eal~RL~~~l~~yr 405 (406)
T PRK06207 389 AAVAAVERIAALIERYR 405 (406)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999855
No 36
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=638.29 Aligned_cols=375 Identities=31% Similarity=0.492 Sum_probs=332.9
Q ss_pred HHHHHHHHHC--CCCHHHHHHHHHHHHHHC--CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC---CCCCCCCCCHHHH
Q ss_conf 3678898738--975899999999999986--99726656589749889999999999983887---5699877898999
Q gi|254780602|r 2 VFISNILRRV--QPSATLVAAQRVRDLRSK--GIDVLCLTAGEPDFDMPENVKYAVVRAMERGE---TKYTAVAGISPLR 74 (400)
Q Consensus 2 ~~~s~~~~~l--~~s~~~~~~~~~~~~~~~--g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~---~~Y~~~~G~~~lR 74 (400)
||+|+|++.| ++|.++++.+.+..++++ +.|||+|++|+|||+||++|++|+.++++++. ++|+++.|.++||
T Consensus 1 ~~~~~~~~~~~~~~s~ir~~f~~~~~~~~~~G~~dVI~l~iG~Pdf~~P~~i~~a~~~a~~~~~~~~~~Y~~~~G~~eLR 80 (396)
T PRK06836 1 MMISRKIKGLLEKSSWIRKMFEEGARLKKEYGAENVFDFSLGNPDVEPPAAVKEALRELAEEEDPGMHGYMPNAGYPEVR 80 (396)
T ss_pred CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 96358999761579889999999999998619998588689598999779999999999967998888779874769999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 99999864210133332233233454333322222223322322223333232222222222222222222223222103
Q gi|254780602|r 75 EAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSP 154 (400)
Q Consensus 75 ~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~ 154 (400)
++||+||++++|++++||||++|+|+++||+++++++++|||+|++++|+|+.|...++.+|++++.+++++++ |.+|+
T Consensus 81 eaIa~~~~~~~g~~~~pe~Iiit~Ga~~al~~~~~~ll~pGD~Vlvp~P~y~~y~~~~~~~g~~~v~v~~~~e~-~~~d~ 159 (396)
T PRK06836 81 EAVAESLNARFGTPLTADHIVMTCGAAGALNVVLKALLNPGDEVIIFAPYFVEYKFYVDNHGGKLVVVPPDTED-FQPDL 159 (396)
T ss_pred HHHHHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCC-CCCCH
T ss_conf 99999999986889958988985887999999999966999989982786506899999849979993167656-76799
Q ss_pred HHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 331000122122012113542100001233332111223333-----320111012211000001223322211123332
Q gi|254780602|r 155 EKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRN-----PHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYE 229 (400)
Q Consensus 155 ~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~-----~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~ 229 (400)
+++++++++++|++++||||||||.+++++++++|+++|.++ ||++||+||+|++++|++.+++++.. +.+
T Consensus 160 ~~l~~~i~~~tk~iilnsP~NPTG~v~s~e~l~~i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd~~~~~s~~~----~~d 235 (396)
T PRK06836 160 DALEAAITPKTKAVIINSPNNPTGVIYSEETLKALGALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK----YYK 235 (396)
T ss_pred HHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHH----CCC
T ss_conf 9999736756629998689898998679999999999999865752886799805740753138987899577----478
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 257414654432234454442211012268753100122-------2332222222222223467643222222110000
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQ-------TSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRR 302 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~-------~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r 302 (400)
++|+++||||+|+|||||+||+++|+++.+......... ..+++.+.|.++..+++... ..+.|++||
T Consensus 236 ~~i~i~S~SK~~~m~G~RiG~iv~~~~i~~~~~~~~~~~~~~~~~~~v~a~~~~q~a~~~~~~~~~-----~~~~y~~rr 310 (396)
T PRK06836 236 NSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLMAALVFANRILGFVNAPSLMQRVVAKLQDATV-----DISIYKRRR 310 (396)
T ss_pred EEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCH-----HHHHHHHHH
T ss_conf 299996464220467311699986889999999999999876550556588999999999746726-----699999999
Q ss_pred CCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCH
Q ss_conf 00024553047760330274089986264102332113322489899999999873979983502289972899962999
Q gi|254780602|r 303 DLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSD 382 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~ 382 (400)
+.+.+.|+++ |+++..|+||||+|++.+ ..++.+|++.| .++||+++||+.||.+|||||||+.++
T Consensus 311 d~l~~~L~~~-g~~~~~P~Gafyl~~~~p------------~~d~~~f~~~l-~e~gV~vvPG~~Fg~~g~vRls~a~~~ 376 (396)
T PRK06836 311 DLLYDALTEL-GFEFVKPQGAFYLFPKSP------------IEDDVAFVEKA-QKYNILLVPGSGFGAPGYFRLAYCVDT 376 (396)
T ss_pred HHHHHHHHHC-CCEECCCCEEEEEEECCC------------CCCHHHHHHHH-HHCCEEEEECCCCCCCCCEEEEECCCH
T ss_conf 9999999984-986317881689986189------------99999999999-969999982743599980899970899
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999998609
Q gi|254780602|r 383 AILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l~ 400 (400)
|+|++|++||++|++++|
T Consensus 377 e~i~eal~rl~~~~~e~k 394 (396)
T PRK06836 377 EQIERSLPAFEKLAKEYK 394 (396)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999863
No 37
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=637.14 Aligned_cols=376 Identities=31% Similarity=0.525 Sum_probs=353.0
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
++|+|++.+++|.++++.+.++ +..|||+||+|+|||++|++|++++.++++++.++|+++.|.++||++||+|++
T Consensus 5 ~~~~r~~~~~~s~i~~~~~~a~----~~pDvI~l~~g~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~ 80 (383)
T PRK06348 5 FIAKKYQQNENNLMSDIATLAK----KFPDIIDLSLGDPDLITDESIIQAAFEDAKKGHTRYTDSTGDKELIEEIINYYK 80 (383)
T ss_pred HHHHHHHHCCCCHHHHHHHHHH----CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 7888860189989999999983----799928899968899988999999999986289988998689999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
+++|+++++++|++|+|+++||+++++++++|||+|++++|+|+.|...+..+|++++.+|+.++++|.+|+++++++++
T Consensus 81 ~~~g~~~~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~i~ 160 (383)
T PRK06348 81 KDYNLSFKENEIMAVVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQVEMVGGKPIIFETYEEDGFQINVDKLEALIT 160 (383)
T ss_pred HHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCC
T ss_conf 98789997674999489899999999996599998998069860269999980886253244566686579689898568
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||.+|+++++++|+++|. +||++||+||+|++++|++ ++.|+.++ ++..+++|+++||||+|+
T Consensus 161 ~~tk~iil~~P~NPTG~v~~~e~l~~l~~la~-~~~i~visDEiY~~l~~~~-~~~p~~~~-~~~~~~~I~~~S~SK~~~ 237 (383)
T PRK06348 161 SKTKAIILNSPNNPTGAVFSKETLEEIAKVAI-ENDLVIISDEVYDGFTFYE-DFCPMASL-AGMKERTITFGSFSKDFA 237 (383)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HCCEEEEECCCHHHHCCCC-CCCCHHHC-CCCCCEEEEEECCHHHCC
T ss_conf 78729998999798888777789999997653-0686998514334420389-99883222-566651899921423115
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++|+.+++.+.++++....+++++.|.+++.+|+..++|+..+++.|++|++++.+.|++++++++.+|+|
T Consensus 238 ~~G~RiG~~i~p~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~~p~G 317 (383)
T PRK06348 238 MTGWRIGYVIAPDYIINTMKNINEGICFSAPTISQRAAIYALKHRDTIVPPIKEEFQKRMEYAYSRIESIPKLSLHPPKG 317 (383)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE
T ss_conf 88860799982799999999997317666872999999999858699999999999999999999997489957617881
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 089986264102332113322489899999999873979983502289--9728999629999999999999999
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
|||+|++++.. ..++.+|+++|++++||+++||+.||. ++||||||+.++++|+||++||++.
T Consensus 318 ~~y~w~~~~~~----------~~~~~~~~~~ll~~~gV~v~PG~~Fg~~g~~~iRls~~~~~~~l~ea~~Rl~k~ 382 (383)
T PRK06348 318 SIYAFINIKKT----------GLSSVEFCEYLLKEAHVLVIPGKAFGKSGEGYIRLACTVGLEELEEAFNRIEKM 382 (383)
T ss_pred EEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 67997889999----------989999999999868999978545488999979999848999999999999741
No 38
>PRK08362 consensus
Probab=100.00 E-value=0 Score=634.64 Aligned_cols=382 Identities=36% Similarity=0.586 Sum_probs=356.3
Q ss_pred HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 36788987389758999999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
|.+|+|+..++||.++++.+.+. ..+|||+||+|+|||++|+.|+++++++++.+.++|+++.|.++||++||+||
T Consensus 1 m~~s~r~~~~~~s~ir~~~~~~~----~~~dvI~l~~g~pd~~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~ 76 (389)
T PRK08362 1 MALSDRLDLVNPSEIRKLFDLAA----GMKDVISLGIGEPDFDTPQHIKEYAKEALDKGLTHYGPNIGLPELREAIAEKL 76 (389)
T ss_pred CCHHHHHHCCCCCHHHHHHHHHH----CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 97616742399488999999973----89980899999799987899999999998558768899857099999999999
Q ss_pred HHHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 42101333322-33233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 82 RRDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 82 ~~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
++++|++++|+ +|++|+|+++|+.++++++++|||+|++++|+|+.|...+...|++++.+|+.++++|.+|+|++++.
T Consensus 77 ~~~~g~~~~p~~~i~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~ 156 (389)
T PRK08362 77 KKQNGIEADPKKEIMVLVGANQAFLMGLATFLKDGEEVLIPSPMFVSYAPAVILAGGKPVEVPTYEENEFRLNVDDLKKY 156 (389)
T ss_pred HHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 88409999976439981886999999999975899989981586542689999749989998545777887699999974
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|++++||||||||.+||++++++|+++| ++||++||+||+|++++|++.++.|+.++. +..+++|+++||||+
T Consensus 157 i~~~~k~iil~~P~NPtG~v~s~~~l~~i~~~a-~~~~~~ii~DEiY~~l~~~~~~~~s~~~~~-~~~~~~i~~~S~SK~ 234 (389)
T PRK08362 157 VTEKTRALIINSPNNPTGSVLTKKDLEEIADFA-VEHDLMVISDEVYEHFIYDGVKHYSIASLD-GMFERTITVNGFSKT 234 (389)
T ss_pred CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHCCEEEEECCCHHHHCCCCCCCCCHHHCC-CCCCCEEEECCCHHH
T ss_conf 544682999848989847463199999999998-754957981464564101897776866604-544520230331010
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 2234454442211012268753100122233222222222222346764--32222221100000002455304776033
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQD--FVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|++||||+||+++++++++++.+.+.+...+++++.|.++..+|.+.+. +++++++.|++||+.+.+.|+++ |+.+.
T Consensus 235 ~~l~G~RiG~~i~~~~~i~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~ 313 (389)
T PRK08362 235 FAMTGWRLGFVAAPSWVIEKMVKFQMYNATCPVTFIQYAAAKALRDERSWKAVEEMRKEYDRRRNLVWKRLNEM-GLPTV 313 (389)
T ss_pred CCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_conf 16876536999808999999999998604788659999999998597047999998788999999999988875-99555
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.|+||||+|+++++. ..++.+|+++|++++||+++||+.||. ++|+||+|+.+++++++|++||++++
T Consensus 314 ~P~g~~~~w~~~~~~----------~~~~~~~~~~ll~e~gV~~~PG~~Fg~~~~~~~Rl~~a~~~e~l~ea~~RL~~~l 383 (389)
T PRK08362 314 KPKGAFYIFPRIRDT----------GLTSKEFSELMLKEAKVAVVPGSAFGKAGEGYIRISYATAYEKLEEAMDRMEKVL 383 (389)
T ss_pred CCCEEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 788258994788888----------9899999999998299999867333889989799997199999999999999999
Q ss_pred HHCC
Q ss_conf 8609
Q gi|254780602|r 397 HSLQ 400 (400)
Q Consensus 397 ~~l~ 400 (400)
+..|
T Consensus 384 ~e~k 387 (389)
T PRK08362 384 KEKK 387 (389)
T ss_pred HHCC
T ss_conf 8556
No 39
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=631.11 Aligned_cols=380 Identities=27% Similarity=0.435 Sum_probs=349.7
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838-87569987789899999999
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMER-GETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~aia~ 79 (400)
|..+++|+.++++|.+.++.+ +.++|++||+|++|+|||+||+++++|+.+++.+ +.++|+++.|+++||++||+
T Consensus 1 mp~~a~r~~~~~~~~~~~~~~----l~~~~~~iI~l~~G~pd~~~p~~v~~a~~~al~~~~~~~Y~~~~G~~~LR~aia~ 76 (389)
T PRK05957 1 MPQPTSRMDAVQSPIIPVVGQ----LIRENPGTISLGQGVVSYPPPPEAIEALNNFLANPENHLYQSVQGIPPLLEAITQ 76 (389)
T ss_pred CCCHHHHHHCCCCCHHHHHHH----HHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 997576640489989999999----9975999388999899999889999999999828678868997574999999999
Q ss_pred HHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 86421013333223-32334543333222222233223222233332322222222222222222222232221033310
Q gi|254780602|r 80 KFRRDNDLHYTSDQ-IIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLE 158 (400)
Q Consensus 80 ~~~~~~g~~~~~e~-I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (400)
||++++|+++++|+ |++|+|+++|+.++++++++|||+|++++|+|+.|...++.+|++++.+|++ ++|.+|+|.++
T Consensus 77 ~~~~~~g~~~~~~~~I~vt~Ga~~al~~~~~al~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~vp~d--~~~~~~~~~l~ 154 (389)
T PRK05957 77 KLQADNGIEINNENAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPVLVPTD--ENYQLRPEAIE 154 (389)
T ss_pred HHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECC--CCCCCCHHHHH
T ss_conf 9999968998989889988788999999999975999989977887766899999749935886579--98897999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 00122122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 159 QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 159 ~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
+++++++|++++||||||||.+||.+++++|+++| ++||++||+||+|+++.|++.++.+..++. +..+++|+++|||
T Consensus 155 ~~i~~~~k~iil~~P~NPTG~v~s~~~l~~l~~la-~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~-~~~~~vI~i~S~S 232 (389)
T PRK05957 155 AAITPKTRAIVTISPNNPTGVVYPEALLRAVNQIC-AEHGIYHISDEAYEYFTYDGVKHFSPGSIP-GSGNHTISLYSLS 232 (389)
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEEECCCCCCCCCCCCCCCCHHHCC-CCCCCCCCCCCCC
T ss_conf 84510262786189989989887677899999876-067818998984321345886667765445-6345430134443
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-EE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776-03
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGI-RY 317 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~-~~ 317 (400)
|+|++||||+||+++|+++++.+.+++++...+++.+.|.+++.+|+..++|+++.+..++++|+.+.+.|++++++ .+
T Consensus 233 K~~~~~G~RvG~~v~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~ 312 (389)
T PRK05957 233 KAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLAQLQDWCFL 312 (389)
T ss_pred CCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 12446564348898389999999999854567853999999999997799999999999999999999999856897266
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEE-CCHHHHHHHHHHHHH
Q ss_conf 302740899862641023321133224898999999998739799835022899--72899962-999999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYA-VSDAILEEACVRIKR 394 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~-~~~e~l~~al~rl~~ 394 (400)
.+|+||||+|++++. ..++.+|+.+|++++||+++||+.||.+ +|+||||+ .++|+|++|++||++
T Consensus 313 ~~p~G~f~~~~~~~~-----------~~~~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~Rlsf~~~~~e~l~eg~~RL~~ 381 (389)
T PRK05957 313 HPANGAFYCFLKVNT-----------DLNDFELVKQLIRDYRVAVIPGSTFGMKNGCYLRIAYGALQKATAKEGIERLVQ 381 (389)
T ss_pred CCCCEEEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 079857999897898-----------969999999999979999978731088999989998542999999999999999
Q ss_pred HHHHC
Q ss_conf 99860
Q gi|254780602|r 395 FCHSL 399 (400)
Q Consensus 395 ~l~~l 399 (400)
+|++|
T Consensus 382 alk~~ 386 (389)
T PRK05957 382 GLKTI 386 (389)
T ss_pred HHHHH
T ss_conf 99999
No 40
>PRK09082 putative aminotransferase; Validated
Probab=100.00 E-value=0 Score=632.44 Aligned_cols=373 Identities=29% Similarity=0.465 Sum_probs=348.0
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
.|+|+.++++|.+.++.+.|++ +++|+|++|+|||+||+++++|++++++++.++|++++|+++||++||++|++
T Consensus 8 ~~~r~~~~~~~~~~~~~~la~~-----~~~I~L~~G~Pd~~~P~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaiA~~~~~ 82 (386)
T PRK09082 8 PQSKLPNVGTTIFTVMSALAAE-----HGAINLSQGFPDFDGPPRLVEALAYAMAAGHNQYPPMTGVAALREAIADKTAR 82 (386)
T ss_pred HHHHCCCCCCCHHHHHHHHHHC-----CCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 3776579999799999999705-----99887279899998789999999999965999898987719999999999999
Q ss_pred HCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 101333322-3323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 84 DNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 84 ~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
++|++++|| +|++|+|+++||+++++++++|||+|++++|+|+.|...++.+|++++++|++++ +|.+|+++++++++
T Consensus 83 ~~g~~~~p~~eI~vT~Ga~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~G~~~v~vpl~~~-~~~~d~~~l~~~i~ 161 (386)
T PRK09082 83 LYGRRYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPP-DFRVDWQRFAAAIT 161 (386)
T ss_pred HHCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCC-CCCCCHHHHHHHCC
T ss_conf 96899898883898778899999999997599998999268628799999984998999267798-88879999996367
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||.++|.+++++|+++|. ++|++||+||+|++++|++.++.|+++. ++..+++|+++||||+|+
T Consensus 162 ~~tk~iil~sP~NPTG~v~s~~~l~~l~~la~-~~~i~ii~DE~Y~~l~~d~~~~~s~~~~-~~~~~~~i~i~S~SK~~~ 239 (386)
T PRK09082 162 PRTRLIILNTPHNPSGTVWSAADMDALAQLIA-GTDILVLSDEVYEHIVFDGQGHASVLRH-PELRERAFVVSSFGKTYH 239 (386)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEECCCHHHHCCCCCCCCCHHHC-CCCCCCCCCCCCCCCCCC
T ss_conf 57649997999697360136355999999999-8194797112223311389888684448-653345444324442457
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++|+++++++.++++....+++++.|.++..+|...++|+.++++.|++||+.+.+.|++. ++++.+|+|
T Consensus 240 ~~G~RiG~~v~p~~l~~~~~~~~~~~~~~~~~~~Q~a~a~~l~~~~~~~~~~~~~y~~rrd~l~~~L~~~-~~~~~~~~G 318 (386)
T PRK09082 240 VTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLLPCEG 318 (386)
T ss_pred CCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCC
T ss_conf 8751059998789999999999986457876899999999996695899999999999999999999867-988847992
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC----CEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 0899862641023321133224898999999998739799835022899----72899962999999999999999
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG----PSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~----~~iRis~~~~~e~l~~al~rl~~ 394 (400)
|||+|++++... ..++.+|+.+|++++||+++||+.|+.+ +|||+||+.++++|++|++||++
T Consensus 319 ~~f~~~~~~~~~---------~~~~~~f~~~l~~e~gV~v~PG~~F~~~~~~~~~iRl~fa~~~e~l~ea~~RLak 385 (386)
T PRK09082 319 TYFQLVDYSAIS---------DLNDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRFCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred EEEEEEECCCCC---------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf 599988603489---------9899999999998589999827110579999997999968999999999999842
No 41
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=0 Score=631.19 Aligned_cols=377 Identities=29% Similarity=0.456 Sum_probs=343.8
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 87389758999999999999869972665658974988999999999998388756998778989999999986421013
Q gi|254780602|r 8 LRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDL 87 (400)
Q Consensus 8 ~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~ 87 (400)
+.+|+|+.+..+.+..+ .++++++|+|++|+|||++|+++++++.++++++.++|+++.|.++||++||+||++++|+
T Consensus 3 ~~rl~~~~~~~~~~~~~--~a~~~~~I~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~ 80 (386)
T PRK07777 3 VSRLRPFGTTIFAEMSA--LAVRTGAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIAPLRAAIAAQRRRRYGL 80 (386)
T ss_pred CCCCCCCCCCHHHHHHH--HHCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 03138998749999999--8579998894997899856899999999998628997799876499999999999998199
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHCCCCCCC
Q ss_conf 33322-332334543333222222233223222233332322222222222222222222-2322210333100012212
Q gi|254780602|r 88 HYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQ-DDNFQVSPEKLEQAITPKT 165 (400)
Q Consensus 88 ~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~~~i~~~~ 165 (400)
+++|| +|++|+|+++||+++++++++|||+|++++|+|+.|...+.++|++++++|+++ +++|.+|++++++++++++
T Consensus 81 ~~~pe~eI~vt~Ga~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~vpl~~~~~~~~~d~~~l~~~~~~~t 160 (386)
T PRK07777 81 EYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVAVPLVPDGRGFALDVDALRAAVTPRT 160 (386)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf 99998809987787999999999964899877634997787699999838925613434778884669699997468777
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 20121135421000012333321112233333201110122110000012233222111233322574146544322344
Q gi|254780602|r 166 KWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 166 k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
|++++||||||||.++|++++++|+++| +++|++||+||+|+++.|++.+++|+.++ ++..+++|+++||||+|++||
T Consensus 161 k~iil~~P~NPTG~v~s~e~l~~l~~la-~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~-~~~~~~~i~i~S~SK~~~~~G 238 (386)
T PRK07777 161 RALIVNSPHNPTGTVLSAAELAAIAELA-VEHDLLVITDEVYEHLVFDGARHLPLATL-PGMAERTVTISSAAKTFNVTG 238 (386)
T ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCHHHHCCCCCCCCCHHHC-CCCCCCCEEECCCCCCCCCCC
T ss_conf 6999799969888488899999999998-64297886575377522688777736546-786576024316667667766
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEE
Q ss_conf 54442211012268753100122233222222222222346764322222211000000024553047760330274089
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFY 325 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y 325 (400)
||+||+++|+++++.+.+.+++...+.+++.|.+++.+|+..++|+.++++.|++||+.+.+.|+++ |+++.+|+||||
T Consensus 239 ~R~G~~v~~~~li~~~~~~~~~~~~~~~~~~Q~a~~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~~-g~~~~~p~G~~f 317 (386)
T PRK07777 239 WKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFAVHDSAGTYF 317 (386)
T ss_pred CCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCEEEE
T ss_conf 2259998589999999999986367586589999999986875999999999999999999999976-988717982689
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC-----CEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 9862641023321133224898999999998739799835022899-----728999629999999999999999986
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG-----PSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-----~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
+|++++... ..|+.+|+.+|++++||+++||+.||.+ +|||+||+.++|+|+||++||+++++.
T Consensus 318 ~~~~~~~~~---------~~d~~~f~~~L~~~~gV~v~PG~~F~~~~~~g~~~vRlsf~~~~e~l~ea~~RL~~~~rR 386 (386)
T PRK07777 318 LCADPRPLG---------YDDGTAFCRALPERVGVAAIPMSAFCDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRRR 386 (386)
T ss_pred EEEECCCCC---------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCC
T ss_conf 988666689---------999999999999868999988744288987789979999689999999999999998649
No 42
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=630.84 Aligned_cols=380 Identities=23% Similarity=0.375 Sum_probs=351.5
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHH-HCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHH
Q ss_conf 788987389758999999999999-869972665658974988999999999998388-756998778989999999986
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLR-SKGIDVLCLTAGEPDFDMPENVKYAVVRAMERG-ETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~-~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~-~~~Y~~~~G~~~lR~aia~~~ 81 (400)
+|+++++++|+++.++..+.+++. ++|+|||+|++|+|||+||++|++|+.+++.++ .++|+++.|+++||++||+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~vI~L~~G~Pdf~~p~~i~~a~~~a~~~~~~~~Y~~~~G~~~LR~aia~~~ 81 (387)
T PRK07550 2 LNPLVAATFPPPIMEVRRWLAGYSFPAGRPLIDLSQAVPVYPPPPELRRALAEAAGDPAAHLYGPVEGLPELREAYAAQY 81 (387)
T ss_pred CCCCHHHCCCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 88525345999499999997478766999715898988989878999999999966988888989857199999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|+++++|+|++|+|++++|.++++++++|||+|++++|+|+.|...++.+|++++.+|++++++|.+|++++++++
T Consensus 82 ~~~~g~~~~pe~I~it~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vp~~~~~~~~~d~~~le~~~ 161 (387)
T PRK07550 82 SRLYGAAINPGQVAITSGCNQAFWAAMVTLAGAGDEVILPTPWYFNHKMWLDMLGIRAVLVPLDTGPGLLPDPEAAAALI 161 (387)
T ss_pred HHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHC
T ss_conf 99868899679889876789999999999718989899827967537999997699897347775679877999999755
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|++++||||||||.+||++++++|+++| ++||++||+||+|+++.+++.++.++.+ .++..+++|+++||||+|
T Consensus 162 ~~~tk~iil~~P~NPtG~v~s~e~l~~l~~la-~~~~~~iI~DEiY~~~~~~~~~~~~~~~-~~~~~~~vI~i~S~SK~~ 239 (387)
T PRK07550 162 TPRTRAIVLVTPNNPTGVVYPPELLHELYDLA-RRRGLALILDETYRDFDSRGGAPHDLFA-DPDWGDTLVHLYSFSKAY 239 (387)
T ss_pred CCCCCEEECCCCCCCCCCCCCHHHHHHHHHHC-CCEEEEEEECCCHHHHHCCCCCCCCHHH-CCCCCCEEEEECCCCCCC
T ss_conf 65783770389969988510779853465430-3315899941757875338877766765-336675599974676445
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 23445444221101226875310012223322222222222234676432222221100000002455304776033027
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
++||||+||+++++++++++.+++++...|++.+.|.+++.+|++.++|+.+.+..+.+||+.+.+.|++++++.+ .|+
T Consensus 240 ~~~G~RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~-~~~ 318 (387)
T PRK07550 240 RLTGHRVGALAASPARLAEIEKFLDTMAICAPRIGQIAVLWGIRNLADWVAGNRAEILRRRDALRAGFSRLPGWEL-LAS 318 (387)
T ss_pred CCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE-CCC
T ss_conf 6754217999839999999999997603678779999999998630999999999999999999998864689654-788
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEE-CCHHHHHHHHHHHHHHH
Q ss_conf 4089986264102332113322489899999999873979983502289--972899962-99999999999999999
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYA-VSDAILEEACVRIKRFC 396 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~-~~~e~l~~al~rl~~~l 396 (400)
||||+|++++.. ..++.+|+++|++++||+++||+.||. .+||||||+ .++++|+||++||++|.
T Consensus 319 G~~f~w~~~~~~----------~~~~~~~~~~ll~e~gV~v~PG~~Fg~~g~~~vRlsfa~~~~~~i~ea~~RL~~fa 386 (387)
T PRK07550 319 GAYFAYVRHPFP----------DASSDEVARRLAKEAGILCLPGTMFGPGGERYLRLAFANIDVAGIAELVERLRGFA 386 (387)
T ss_pred CEEEEEEECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 347998837889----------98999999999986999997875338899897999946799999999999998657
No 43
>PRK09147 aminotransferase; Provisional
Probab=100.00 E-value=0 Score=627.47 Aligned_cols=378 Identities=24% Similarity=0.404 Sum_probs=339.8
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHH-HCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 788987389758999999999999-8699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLR-SKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~-~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
+|.|+++++||++.++.+...+++ +.|++||+|++|+|||++|+.|++|+.+++ ++.++|+++.|.++||++||+||+
T Consensus 1 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~vI~L~iG~Pd~~~P~~v~~a~~~a~-~~~~~Y~~~~G~~~LReaia~~~~ 79 (397)
T PRK09147 1 MNPRLDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPKHPTPAFVRDALAANL-DGLAVYPTTAGLPALRQAIARWLE 79 (397)
T ss_pred CCCCHHHCCCCHHHHHHHHHHHCHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9955634899889999999850401389985876488899997899999999986-287789999784999999999999
Q ss_pred HHCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 21013-33322-3323345433332222222332232---2223333232222222222222222222223222103331
Q gi|254780602|r 83 RDNDL-HYTSD-QIIVGTGAKHVIFNALMATVNMGDE---VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKL 157 (400)
Q Consensus 83 ~~~g~-~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~---Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (400)
+++|+ .++++ +|++|+|++++|+++++++++|||+ |++++|+|+.|...+.++|++++.+|++++++|.+|+++|
T Consensus 80 ~~~g~~~~~~~~~v~vt~Ga~~al~~~~~a~l~~gd~g~~Vl~~~P~Y~~y~~~~~~~G~~~v~vp~~~e~~~~~d~~~l 159 (397)
T PRK09147 80 RRYGLPAVDPATQVLPVNGSREALFAFAQTVIDRSDPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANGFAPDFDAV 159 (397)
T ss_pred HHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHH
T ss_conf 87099867857469988882899999998605888988889968887877499999769868992357122777697898
Q ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCC----CCCCCCCCEEE
Q ss_conf 0001221220121135421000012333321112233333201110122110000012233-222----11123332257
Q gi|254780602|r 158 EQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIV----NVEPSLYERTL 232 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~----~~~~~~~~~~i 232 (400)
++++++|||+|++||||||||.+||++++++|+++| ++||++||+||+|++++|++..++ +.. .+..+.++|+|
T Consensus 160 ~~~i~~~tk~iil~sP~NPTG~v~s~e~l~~l~~la-~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~~~~~~~I 238 (397)
T PRK09147 160 PAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALS-DRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLV 238 (397)
T ss_pred HHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHH-CCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCEE
T ss_conf 987311274898689989889988889999999963-2472899982686521547987981577777762656568689
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 41465443223445444221101226875310012223322222222222234676432222221100000002455304
Q gi|254780602|r 233 VVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 233 ~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++|+||+|++||||+||+++++++++++.+++++..++++.+.|.++++++. .+.++.++++.|++|++.+.+.|++.
T Consensus 239 ~~~S~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~A~~aa~~-~~~~~~~~r~~~~~r~~~~~~~l~~~ 317 (397)
T PRK09147 239 VFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPQVQLASIAAWN-DEAHVRENRALYREKFDAVTPILAPV 317 (397)
T ss_pred EECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 98157210367665258886899999999997354222578999999999856-83679999999999999999987337
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--------CCEEEEEEECCHHH
Q ss_conf 7760330274089986264102332113322489899999999873979983502289--------97289996299999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--------GPSIRISYAVSDAI 384 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--------~~~iRis~~~~~e~ 384 (400)
+.+..|+||||+|+++++ .+|.+|+.+|++++||+++||+.||. .+||||+|+.++++
T Consensus 318 --~~~~~P~gg~ylw~~~~~------------~~~~~f~~~Ll~~~gV~v~PGs~F~~~~~g~~~G~g~vRl~~a~~~e~ 383 (397)
T PRK09147 318 --LDVQLPDAGFYLWAKVPG------------GDDTAFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVAPLAE 383 (397)
T ss_pred --CCCCCCCEEEEEEEECCC------------CCHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHH
T ss_conf --987788973599886899------------998999999999689999868100423347888998899997498999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q gi|254780602|r 385 LEEACVRIKRFCHS 398 (400)
Q Consensus 385 l~~al~rl~~~l~~ 398 (400)
|+||++||++||++
T Consensus 384 l~eal~Rl~~~l~s 397 (397)
T PRK09147 384 CVEAAERIVDFLRS 397 (397)
T ss_pred HHHHHHHHHHHHCC
T ss_conf 99999999999729
No 44
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=0 Score=625.88 Aligned_cols=374 Identities=37% Similarity=0.592 Sum_probs=349.7
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 73897589999999999998699726656589749889999999999983887569987789899999999864210133
Q gi|254780602|r 9 RRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 9 ~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~ 88 (400)
+.|+||.++++.+.++ +++|||+||+|+|||++|+.|++|+.++++++.++|+++.|+++||++|++|+++++|++
T Consensus 2 ~~~~~S~ir~~~~~~~----~~~dvi~l~vgdpdf~~p~~i~ea~~~~~~~g~~~Y~~~~G~~~lreaia~~~~~r~g~~ 77 (378)
T PRK07682 2 ESLQPSGIRKFFDLAA----NMEGVISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVS 77 (378)
T ss_pred CCCCCCHHHHHHHHHH----CCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9999668999999872----899828899998999878999999999985699998999888999999999999984899
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
Q ss_conf 3322-332334543333222222233223222233332322222222222222222222232221033310001221220
Q gi|254780602|r 89 YTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKW 167 (400)
Q Consensus 89 ~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~ 167 (400)
++|+ +|++|+|+++|++++++++++|||+|++++|+|+.|...+...|++++++++..+++|.+|++++++++++++|+
T Consensus 78 ~~p~~~i~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~~~~~~k~ 157 (378)
T PRK07682 78 YDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATSLENEFKVQPAQIEAAITAKTKA 157 (378)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 99777599907859999999999659999899925850527999998188569940265458637999999736526838
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 12113542100001233332111223333320111012211000001223322211123332257414654432234454
Q gi|254780602|r 168 LFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 168 i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
+++||||||||.+||++++++|+++|. +||++||+||+|++++|++ +++++.++ ++..+++|+++||||+|++||||
T Consensus 158 iil~~P~NPtG~v~s~~el~~l~~la~-~~~i~iisDEiY~~l~~~~-~~~~~~~~-~~~~~~~i~~~s~SK~f~l~G~R 234 (378)
T PRK07682 158 ILLCSPNNPTGAVLNKSELEEIAVIVE-KHNLIVLSDEIYAELTYDE-AYTSFASI-KGMRERTILISGFSKGFAMTGWR 234 (378)
T ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHH-HCCEEEECCCHHHHHCCCC-CCCCHHHC-CCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 998289798888889999999999764-4596795220146530698-76776552-56444542023412420785730
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEE
Q ss_conf 44221101226875310012223322222222222234676432222221100000002455304776033027408998
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLY 327 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~ 327 (400)
+||+++|+++++.+.+++++...+++++.|.++..+++...+|+.++++.|++||+++.+.|+++ |+.+..|+||||+|
T Consensus 235 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~~P~g~~~~~ 313 (378)
T PRK07682 235 LGMIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRNGNDDVERMRDSYRKRRNFFVTSLNEI-GLTCHVPGGAFYAF 313 (378)
T ss_pred EEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCEEEEEE
T ss_conf 69897089999999999975567798489999999997576879999999999999999999975-98220688678995
Q ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 62641023321133224898999999998739799835022899--72899962999999999999999998609
Q gi|254780602|r 328 PSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
++++.. ..++.+|+.+|++++||+++||+.||.+ +|+||+|+.++++|++|++||++|++++|
T Consensus 314 ~~~~~~----------~~~~~~~~~~ll~~~~V~v~PG~~Fg~~g~~~iRl~~a~~~e~l~eal~Rl~~~l~~~k 378 (378)
T PRK07682 314 PSISST----------GLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENKK 378 (378)
T ss_pred EECCCC----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCC
T ss_conf 787888----------98999999999996999998862228999897999961999999999999999998469
No 45
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=0 Score=620.03 Aligned_cols=375 Identities=25% Similarity=0.439 Sum_probs=337.2
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHH-HHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 78898738975899999999999-98699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDL-RSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~-~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
+|+++++|+||++.++.+..+++ +++|+|||+||+|+|||++|+.|++|+.++++ +.++|+++.|+++||+|||+||+
T Consensus 1 ~~~~~~~l~~~~~~~~~~~~a~~~~~~g~~iI~L~iG~Pd~~~P~~v~ea~~~al~-~~~~Y~~~~G~~~LReAia~~~~ 79 (394)
T TIGR03538 1 MNPNLDRLQPYPFEKLAALLAGVTPPASLPPIALSIGEPKHATPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLE 79 (394)
T ss_pred CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99456347998799999999600340899878784888999977999999999843-88899999886999999999999
Q ss_pred HHCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 21013--33322-3323345433332222222332232--2223333232222222222222222222223222103331
Q gi|254780602|r 83 RDNDL--HYTSD-QIIVGTGAKHVIFNALMATVNMGDE--VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKL 157 (400)
Q Consensus 83 ~~~g~--~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~--Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 157 (400)
+++|+ .++|+ +|++|+|++++|+++++++++|||+ |++|+|+|+.|...+.++|++++.+|++++++|.+|++++
T Consensus 80 ~~~~~~~~~dp~~~I~vt~Ga~~al~~~~~~l~~pGd~~~V~~p~P~Y~~y~~~~~~~g~~~~~v~~~~e~~~~~d~~~l 159 (394)
T TIGR03538 80 RRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAV 159 (394)
T ss_pred HHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCHHHH
T ss_conf 97398877896776998988899999999997299981089947886645299999759989975867345888899999
Q ss_pred HCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCC----CCCCCCCCEEE
Q ss_conf 0001221220121135421000012333321112233333201110122110000012233-222----11123332257
Q gi|254780602|r 158 EQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIV----NVEPSLYERTL 232 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~----~~~~~~~~~~i 232 (400)
++.+++++|+|++||||||||.+++++++++|+++| ++||++||+||+|++++|++...+ ++. ....+.++++|
T Consensus 160 ~~~~~~~tk~iil~sP~NPTG~v~s~~~l~~l~~~a-~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~~i 238 (394)
T TIGR03538 160 PESVWRRCQLLFVCSPGNPTGAVLSLETLKKLIELA-DQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRRCL 238 (394)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCCEE
T ss_conf 874523665999889999989777879999999997-3267699980683327857888973787777662544447679
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 41465443223445444221101226875310012223322222222222234676432222221100000002455304
Q gi|254780602|r 233 VVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 233 ~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++||||+|++||||+||+++++++++++.+.++...++++.+.|.++++++. .+.|+.+.++.|++||+.+.+.|+..
T Consensus 239 ~~~S~SK~~~~~G~RiG~~~~~~~~i~~~~~~~~~~~~~~~~~~q~a~~aa~~-~~~~~~~~r~~~~~r~~~~~~~L~~~ 317 (394)
T TIGR03538 239 VFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPPPTQLASIAAWN-DEQHVRENRALYREKFAAVLEILGPV 317 (394)
T ss_pred EEECCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99556544454675179995799999999985223742689999999999848-98999999999999999999986427
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--------CCEEEEEEECCHHH
Q ss_conf 7760330274089986264102332113322489899999999873979983502289--------97289996299999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--------GPSIRISYAVSDAI 384 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--------~~~iRis~~~~~e~ 384 (400)
+.+..|+||||+|++++ .++.+|+.+|++++||+++||+.||. .+||||||+.+.++
T Consensus 318 --~~~~~P~Gg~y~w~~~~-------------~~~~~f~~~ll~e~gV~v~PG~~F~~~~~~~~~G~g~iR~s~~~~~e~ 382 (394)
T TIGR03538 318 --LDLELPDAGFYLWPKVP-------------GDDEAFARALYEEENVTVLPGRYLSREAEGVNPGAGRVRIALVAPLEE 382 (394)
T ss_pred --CCCCCCCEEEEEEEECC-------------CCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCCEEEEEECCCHHH
T ss_conf --96257985489999689-------------999999999998689999877341655457888999899997598999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780602|r 385 LEEACVRIKRFC 396 (400)
Q Consensus 385 l~~al~rl~~~l 396 (400)
|+||++||++|+
T Consensus 383 l~ea~~Rl~~fl 394 (394)
T TIGR03538 383 CVEAAERIRRFI 394 (394)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999869
No 46
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=617.34 Aligned_cols=380 Identities=43% Similarity=0.676 Sum_probs=348.8
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCC--CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 87389758999999999999869--9726656589749889999999999983887569987789899999999864210
Q gi|254780602|r 8 LRRVQPSATLVAAQRVRDLRSKG--IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDN 85 (400)
Q Consensus 8 ~~~l~~s~~~~~~~~~~~~~~~g--~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~ 85 (400)
+....++..+.+...++++...+ .++|+|++|+|||++|+++++++.+++..+..+|++.+|.++||++||++|++++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~ 82 (393)
T COG0436 3 LLKVLPSYTFAVLAEAKAAAELKGKEDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRY 82 (393)
T ss_pred CHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 01027610688988999998621678679756889999986999999999986567777887677999999999988753
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHCCCCC
Q ss_conf 13333223-323345433332222222332232222333323222222222222222222222-3222103331000122
Q gi|254780602|r 86 DLHYTSDQ-IIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQD-DNFQVSPEKLEQAITP 163 (400)
Q Consensus 86 g~~~~~e~-I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~-~~~~~d~~~l~~~i~~ 163 (400)
|+++++++ |++|+|+++||++++.++++|||+|++++|+|+.|...+.++|++++.++++.+ ++|.+|+++|++++++
T Consensus 83 ~~~~~~~~eiivt~Ga~~al~~a~~al~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ 162 (393)
T COG0436 83 GLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP 162 (393)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCC
T ss_conf 99889766289826679999999999718998899838998255999987799798721666655874799999864774
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
|||+|+|||||||||.+++++++++|+++| ++||++||+||+|++|+|++.+++|++.+.+. .+++|+++||||+|+|
T Consensus 163 ktk~i~ln~PnNPTGav~~~~~l~~i~~~a-~~~~i~ii~DE~Y~~l~yd~~~~~s~~~~~~~-~~~~I~i~s~SK~~~m 240 (393)
T COG0436 163 KTKAIILNSPNNPTGAVYSKEELKAIVELA-REHDIIIISDEIYEELVYDGAEHPSILELAGA-RDRTITINSFSKTYGM 240 (393)
T ss_pred CCEEEEEECCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCCCCCCHHHCCCC-CCEEEEEECCCCCCCC
T ss_conf 645999979999667788999999999999-98792999963644362689877775442787-6418999456335788
Q ss_pred CCCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-
Q ss_conf 44544422110-1226875310012223322222222222234676--4322222211000000024553047760330-
Q gi|254780602|r 244 TGLRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ--DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI- 319 (400)
Q Consensus 244 ~G~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~- 319 (400)
+|||+||++++ +++++.+.++++++.+|++++.|.+++.+|++.+ ++++.+++.|++||+.+++.|++++|+.+..
T Consensus 241 tG~RiG~~v~~~~~l~~~~~~l~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~~ 320 (393)
T COG0436 241 TGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKP 320 (393)
T ss_pred CCCCEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_conf 36121899727699999999999872368778999999999567663058999999999999999999975588665138
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC---CEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022899---7289996299999999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG---PSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~---~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
|+|+||+|++++.. .++++||.+|++++||+++||+.||.. +|||+||+.+++.+++|++||++++
T Consensus 321 p~Ga~y~~~~i~~~-----------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~ 389 (393)
T COG0436 321 PEGAFYLFPKIPEL-----------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFL 389 (393)
T ss_pred CCCCEEEEEECCCC-----------CCHHHHHHHHHHHCCEEEECHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 88645997657998-----------9989999999986799995725749787798799997368999999999999998
Q ss_pred HHCC
Q ss_conf 8609
Q gi|254780602|r 397 HSLQ 400 (400)
Q Consensus 397 ~~l~ 400 (400)
+.++
T Consensus 390 ~~~~ 393 (393)
T COG0436 390 AEYR 393 (393)
T ss_pred HHCC
T ss_conf 6109
No 47
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=0 Score=619.82 Aligned_cols=372 Identities=30% Similarity=0.485 Sum_probs=344.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
-++|+.++++|.+.++.+.|. ++|||+|++|+|||+||+++++++.++++++.++|+++.|.++||++||+||++
T Consensus 7 p~~r~~~~~~~~~~~~~~~a~-----~~dvI~l~~G~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~ 81 (384)
T PRK12414 7 PRSKLPDVGTTIFTVIGQLAA-----QHDALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTER 81 (384)
T ss_pred CHHHCCCCCCCHHHHHHHHHC-----CCCCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 654578999988999999973-----899688189899999989999999999961999898998719999999999999
Q ss_pred HCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 101333322-3323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 84 DNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 84 ~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
++|++++|+ +|++|+|+++||+++++++++|||+|++++|+|+.|...++.+|++++++++.++ +|.+|.++++++++
T Consensus 82 ~~g~~~dp~~~i~vt~G~~~al~~~~~al~~pGD~Vlv~~P~y~~y~~~~~~~Ga~~v~v~~~~~-~~~~d~~~l~~~~~ 160 (384)
T PRK12414 82 LYGARYDPDTEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPE-HFRVNWDEVAAAIT 160 (384)
T ss_pred HHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCC-CCCCCHHHHHHHCC
T ss_conf 96899998880998479899999999996799998999089706569999985998999866855-68889999996277
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||.++|.+++++|+++| +++|++||+||+|+++.|++.+++++... +++.+++|+++||||+|+
T Consensus 161 ~~tk~iil~~P~NPTG~v~s~e~l~~l~~la-~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~-~~~~~~~I~i~S~SK~~~ 238 (384)
T PRK12414 161 PRTRMIIVNTPHNPTATVFSEADLARLAQLT-RGTDIVVLSDEVYEHVVFDGARHHSMARH-RELAERSVIVSSFGKSYH 238 (384)
T ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHEECCCCCCCCHHHC-CCCCCCCCCCCCCCCCCC
T ss_conf 7866999799989877137566699999987-51588999666323303178777664315-120113323567750000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++|+++++++.+++++...+++++.|.+++++|.+++.+. ++++.|++||+.+.+.|++. ++++.+|+|
T Consensus 239 ~~G~RvG~~v~p~~li~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~-~~~~~y~~rrd~l~~~L~~~-~~~~~~p~G 316 (384)
T PRK12414 239 VTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQYAFAEALARPASYL-GLSAFYQRKRDLLARELADS-RFELLPSEG 316 (384)
T ss_pred CCCCEEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHHHC-CCEEECCCC
T ss_conf 2651279998489999999999975657867899999999982982499-99999999999999976756-987878980
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 089986264102332113322489899999999873979983502289----972899962999999999999999
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
|||+|++++.+. ..++.+|+.+|++++||+++||+.||. .+||||||+.++++|+||++||++
T Consensus 317 ~fy~~~~~~~~~---------~~~d~~~~~~ll~e~gV~vvPG~~Fg~~g~~~g~iRlsfa~~~e~l~eg~~RL~~ 383 (384)
T PRK12414 317 SFFMLARFRHFS---------DESDSDFVLRLIRDARVATIPLSAFYADGTDTGVIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred EEEEEEECCCCC---------CCCHHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHC
T ss_conf 799999768789---------9999999999998599999826321799998998999967999999999999703
No 48
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=0 Score=617.52 Aligned_cols=378 Identities=33% Similarity=0.546 Sum_probs=349.1
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
.+|+|++++++|.++++.+++. ++.|||+||+|+|||++|++|++|++++++++.++|+++.|.++||++|++|++
T Consensus 6 ~~s~~~~~~~~s~ir~~~~~~~----~~~dvI~l~ig~pdf~~p~~i~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 81 (390)
T PRK07309 6 RFNKNLDKIEVSLIRQFDQSIS----DIPGILKLTLGEPDFTTPEHVKEAAKAAIDANQSHYTGMAGLLELRQAAADFVK 81 (390)
T ss_pred HHHHHHHCCCCCHHHHHHHHHH----CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999871299878999999860----899908998978999988999999999984799999799774999999999999
Q ss_pred HHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 2101333322-332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 83 RDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 83 ~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
+++|++++|+ +|++|+|+++||.++++++++|||+|++++|+|+.|...++..|++++.+++++ ++|.+|+|.+++.+
T Consensus 82 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~~~~~~~~~g~~~v~v~~~~-~~~~~~~~~le~~~ 160 (390)
T PRK07309 82 EKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEMLEKAI 160 (390)
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCC-CCCCCCHHHHHHHH
T ss_conf 98589999888799888989999999999669989899837874419999998498899944620-11578999999998
Q ss_pred C---CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 2---2122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 162 T---PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 162 ~---~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
. +++|++++||||||||.+||++++++|+++| ++||++||+||+|++++|++.++.|+.+.. .+++|+++|+|
T Consensus 161 ~~~~~k~k~lil~~P~NPtG~v~s~e~l~~i~~la-~~~~v~iisDEiY~~l~~~~~~~~s~~~~~---~d~~i~~~s~S 236 (390)
T PRK07309 161 LEQGDKLKAVILNYPANPTGVTYSREQIKALAEVL-KKYDIFVISDEVYSELTYTGQSHVSIAEYL---PDQTILINGLS 236 (390)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCHHCCCCCCCCCCHHHHC---CCCEEEEECCC
T ss_conf 74888749999789989988878999999999999-768989995055111014898864487755---57679996060
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|++||||+||+++|+++++++.+.+++...+++++.|.++..+|....++...++..|.+||+.+.+.|.++ |+++.
T Consensus 237 K~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~~-~~~~~ 315 (390)
T PRK07309 237 KSHAMTGWRIGLIFAPAELTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTAL-GFKII 315 (390)
T ss_pred HHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCC
T ss_conf 56540466358997499999999999865305787499999999997482789999999999999999999862-78633
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.|+||||+|++++... ..++.+|+..|++++||+++||+.||. ++|+||+|+.++++|++|++||++|+
T Consensus 316 ~P~gg~ylw~~lp~~~---------~~d~~~~~~~l~~~~gV~v~PG~~Fg~~g~g~iRl~~a~~~e~l~eal~Rl~~~l 386 (390)
T PRK07309 316 KPDGAFYIFAKIPAGY---------NQDSFKFLQDFAKEKAVAIIPGVAFGPYGEGYVRLSYAASMETIKEAMKRLKEYM 386 (390)
T ss_pred CCCEEEEEEEECCCCC---------CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 8980069807457899---------9899999999999699999777322889998799998289999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
++.
T Consensus 387 ~e~ 389 (390)
T PRK07309 387 EEH 389 (390)
T ss_pred HHC
T ss_conf 971
No 49
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=0 Score=616.64 Aligned_cols=375 Identities=22% Similarity=0.265 Sum_probs=329.9
Q ss_pred CHHHHHHHHHCCC-CHHHHHHHHHHHHHHC--CCCEEECCCCCCCCCCCHHHHHHHHHHHHC-----CCCCCCCCCCCHH
Q ss_conf 9367889873897-5899999999999986--997266565897498899999999999838-----8756998778989
Q gi|254780602|r 1 MVFISNILRRVQP-SATLVAAQRVRDLRSK--GIDVLCLTAGEPDFDMPENVKYAVVRAMER-----GETKYTAVAGISP 72 (400)
Q Consensus 1 m~~~s~~~~~l~~-s~~~~~~~~~~~~~~~--g~~ii~l~~G~p~~~~p~~i~~a~~~al~~-----~~~~Y~~~~G~~~ 72 (400)
|.+++.+..++.+ +++-++..+.++++++ |+|||+||+|+|||++|++|++|+++++++ +.++|+++.|+|+
T Consensus 1 ~~~~~~~~~~~~~~y~f~~~~~~~~~~~~~~~~~dvI~L~iGePdf~tP~~i~eA~~~a~~~~~~~~~~~gYt~~~G~~e 80 (409)
T PRK07590 1 MAKINENYLKLKAGYLFPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDF 80 (409)
T ss_pred CCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf 98646033418878855899999999997589998667889897899999999999999983012688785898747499
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----------CC
Q ss_conf 9999999864210133332233233454333322222223322322223333232222222222222-----------22
Q gi|254780602|r 73 LREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIP-----------VF 141 (400)
Q Consensus 73 lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~-----------~~ 141 (400)
||+|||+||++++|+++++|+|++|+|++++++. ++++++|||+|++++|+|+.|...+.++|+.+ ++
T Consensus 81 LReAIa~~~~~~~g~~~~~~~I~vt~Ga~~~l~~-i~~ll~pGDeViip~P~Yp~Y~~~~~laG~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 81 LREKIAENDYQARGCDIDAEEIFVSDGAKCDTGN-ILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYEGIVY 159 (409)
T ss_pred HHHHHHHHHHHHHCCCCCHHHEEECCCHHHHHHH-HHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEE
T ss_conf 9999999999984899876886874867999999-999839999899668877446989987488530135665567246
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 22222232221033310001221220121135421000012333321112233333201110122110000012233222
Q gi|254780602|r 142 VDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV 221 (400)
Q Consensus 142 v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~ 221 (400)
+|+.++++|.+++ .++++|+|+|||||||||.||+++++++|+++| ++||++||+||+|++++|++..+.|+.
T Consensus 160 ~~~~~e~~f~~~~------~~~ktk~iilnsP~NPTG~V~s~eel~~i~~~a-~~~~i~iisDEiY~~~~~~~~~p~si~ 232 (409)
T PRK07590 160 LPCTAENNFIPEL------PSEKVDIIYLCFPNNPTGTVATKEQLKAWVDYA-KANGSLILFDAAYEAFISDPSIPHSIY 232 (409)
T ss_pred CCCCHHHCCCCCC------CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCCCCCHH
T ss_conf 5588343547435------654602999848989956557999999999999-874978997076200136898775776
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH------------HCCCCCCCCCCCCCCCCCCCCCC-CC
Q ss_conf 111233322574146544322344544422110122687531------------00122233222222222222346-76
Q gi|254780602|r 222 NVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV------------LQGQQTSGACSIAQWAAVEALNG-PQ 288 (400)
Q Consensus 222 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~------------~~~~~~~~~~~~~q~a~~~~l~~-~~ 288 (400)
++ ++..+++|+++||||+|+|||||+||+++|++++..... .+.....+++.+.|.++.+++.. ++
T Consensus 233 ~~-~~~~~~~I~i~s~SK~~~mtGwRiG~~v~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~aa~a~l~~~~~ 311 (409)
T PRK07590 233 EI-EGAKECAIEFRSFSKNAGFTGTRCAYTVVPKELKGKDSEGEIVDLNSLWNRRQSTKFNGVSYIVQRGAEAVYSPEGQ 311 (409)
T ss_pred HC-CCCCCCEEEEEECHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCH
T ss_conf 54-65501468971352640786443698975799998864446999999999875025578689999999999654878
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC
Q ss_conf 43222222110000000245530477603302740899862641023321133224898999999998739799835022
Q gi|254780602|r 289 DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF 368 (400)
Q Consensus 289 ~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F 368 (400)
.+++++++.|++||+.+.+.|+++ |+++..|+|+||+|+++++ ..++++|+++|++++||+++||+.|
T Consensus 312 ~~~~~~~~~y~~rr~~~~~~L~~~-g~~~~~p~gafY~w~~~~~-----------~~~~~ef~~~Ll~e~~Vav~PG~~F 379 (409)
T PRK07590 312 AQIKELISYYMENAKIIREGLEAA-GFTVYGGVNAPYIWVKTPD-----------GLSSWDFFDKLLQEANVVGTPGSGF 379 (409)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCEEECCCCCEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHH
T ss_conf 999999999999999999999975-9767279972389888999-----------9898999999998699999686465
Q ss_pred CCC--CEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 899--7289996299999999999999999
Q gi|254780602|r 369 GHG--PSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 369 g~~--~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
|.+ +|||+||+.+.++|++|++||+++|
T Consensus 380 G~~g~g~vRls~a~~~e~l~ea~~Ri~~~L 409 (409)
T PRK07590 380 GPAGEGYFRLSAFGSRENVLEAMERIKKLL 409 (409)
T ss_pred CCCCCCEEEEEECCCHHHHHHHHHHHHHHC
T ss_conf 899989699997289999999999999859
No 50
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=0 Score=612.23 Aligned_cols=388 Identities=22% Similarity=0.308 Sum_probs=330.3
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC---CCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHH
Q ss_conf 98738975899999999999986997266565897---498899999999999838875-69987789899999999864
Q gi|254780602|r 7 ILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEP---DFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 7 ~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p---~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~ 82 (400)
+...+ .+.+++|..+|++++++|+|||+|++|+| ||++|+++++++.+++.++.+ +|+++.|+++||++||+||+
T Consensus 9 ~~~~~-~y~Ir~i~~~A~~l~~~G~~Ii~L~iGeP~~~df~tP~~i~ea~~~a~~~~~~~~Yt~s~G~~eLReaIA~~~~ 87 (433)
T PRK06855 9 GAGEL-TYEIRNIVNVAKKLEKLGIKINWENIGDPIAKGEKIPLWMKEIVSELVMDDKSYGYCPTRGVLETREFLAELTN 87 (433)
T ss_pred CCCCE-EEEHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 85434-56198899999999977997657469896989999888999999999858999886998884999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 2101333322332334543333222222233223222233332322222-222222222222222232221033310001
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM-VALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~-~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
+++|++++||+|++|+|++++|..+ .++++|||+|++|+|+|+.|... ....|++++.++++++++|.+|+++|++++
T Consensus 88 ~~~g~~~~pd~I~vt~Ga~~ai~~~-~~~l~pgdeVlip~P~Yp~Y~~~~~~~~g~~pv~~~l~~e~~f~~d~e~l~~~i 166 (433)
T PRK06855 88 KRGGAQITPDDILFFNGLGDAIAKI-YGFLRREARVLGPSPAYSTHSSAEAAHAGCEPVTYRLDPEDNWYPDLDDLENKV 166 (433)
T ss_pred HHCCCCCCHHHEEEECCHHHHHHHH-HHHCCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHH
T ss_conf 8739999878988957769999999-996289998996278873509999996898689995571018778999999998
Q ss_pred --CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf --221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 162 --TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 162 --~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
++++|+|+++|||||||.+++++++++|+++| +++|++||+||+|++++|++.++.|+..+.++ .++|+++||||
T Consensus 167 ~~~~~~kaiii~nP~NPTG~v~s~e~l~~i~~~a-~~~~i~visDEiY~~l~ydg~~~~s~~~~~~~--~~~i~~ns~SK 243 (433)
T PRK06855 167 KYNPSIAGILLINPDNPTGAVYPKEILREIVDIA-REYDLFIIADEIYANIVYNGKKTVPLSEVIGD--VPGIALKGISK 243 (433)
T ss_pred HCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCEECCCCCCCHHHHCCC--CCEEEEEEEHH
T ss_conf 6699724999838999988667999999999999-97598698631011245489876388996675--77379820010
Q ss_pred CCCCCCCCCCCCCC----HHHHHHHH-HHHC--CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 32234454442211----01226875-3100--12223322222222222234676--4322222211000000024553
Q gi|254780602|r 240 AYAMTGLRIGYAAG----ALSLIKSM-IVLQ--GQQTSGACSIAQWAAVEALNGPQ--DFVVNNRKIFEYRRDLCVAQLQ 310 (400)
Q Consensus 240 ~~~~~G~RiG~~v~----~~~li~~l-~~~~--~~~~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~r~~~~~~L~ 310 (400)
+|+|+|||+||++. +.+.++++ ..+. .....|++++.|.++..++.+++ .|++++++.|++||+++++.|+
T Consensus 244 ~~~mtGwRiG~~~~~~~~~~~~~~~~~~~i~~~~~~~~cs~~~~Q~a~~a~l~~~~~~~~~~e~~~~y~~RRd~l~~~L~ 323 (433)
T PRK06855 244 ELPWPGSRCGWIEVYNAEKDPVFKKYIKSILDAKMIEVCSTTLPQKAIPAIMSHPEYKPYLEERNSRYEKRSNIAYEYLK 323 (433)
T ss_pred CCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38976312678863157736999999999998774275813899999999855984379999999999999999999995
Q ss_pred CCCCCEEEECCCCEEEEEECCCCCCCC----------------CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC-CE
Q ss_conf 047760330274089986264102332----------------1133224898999999998739799835022899-72
Q gi|254780602|r 311 GVPGIRYMIPDGAFYLYPSCQDLIGKK----------------SPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG-PS 373 (400)
Q Consensus 311 ~~~g~~~~~p~g~~y~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-~~ 373 (400)
+++|++|.+|+|+||+|+.+++..... ........+|++||.+||+++||+++||++||.+ ++
T Consensus 324 ~ipGv~~~~P~GAFY~fv~~~~~~l~~~~~lp~~~~~~~~~~~~~~~~~~~~D~~f~~~LLee~gVavVPGS~FG~~~~g 403 (433)
T PRK06855 324 DIPGLKVNRTNGAFYMTVVFEDGVLNNRQSLPIENAEVRELVESLVKQGVAPDKRFVYYLLASTGICVVPLSSFCTELNG 403 (433)
T ss_pred CCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCC
T ss_conf 69993716997115875305532356322466555467888876541278867999999998559999657112899996
Q ss_pred EEEEEECCHHHHHHHHHH-HHHHHHHC
Q ss_conf 899962999999999999-99999860
Q gi|254780602|r 374 IRISYAVSDAILEEACVR-IKRFCHSL 399 (400)
Q Consensus 374 iRis~~~~~e~l~~al~r-l~~~l~~l 399 (400)
+|++|+.++|++.|++.| |+++++.+
T Consensus 404 fRit~l~~~E~~~E~i~r~~~e~~~e~ 430 (433)
T PRK06855 404 FRVTLLERDEEKFEWIYRTLAEKIGEY 430 (433)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 699957970799999999999999998
No 51
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=0 Score=601.96 Aligned_cols=370 Identities=26% Similarity=0.450 Sum_probs=329.1
Q ss_pred HHHHHHHHHHHCCCCEEECCCCCC---CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 999999999986997266565897---49889999999999983887569987789899999999864210133332233
Q gi|254780602|r 18 VAAQRVRDLRSKGIDVLCLTAGEP---DFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQI 94 (400)
Q Consensus 18 ~~~~~~~~~~~~g~~ii~l~~G~p---~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I 94 (400)
.+.++|+.++.+|++|+.|++|+| .|.+|++|+..+.+.+.+ ..||++++|+...|+||.+|++.+.-.+++.|+|
T Consensus 133 p~~~~a~~~e~~g~~i~klnignpa~fgf~~p~~~~~~~~~~~~~-~~gy~~s~g~~~ar~a~~~~~q~~~~~~~~~~di 211 (518)
T PRK13355 133 PVADEAMRMEANGTHILKLNIGNPAPFGFRTPDEVVYDMAHQLPD-TEGYSPSKGLFSARKAIMQYAQLKNIPNVDIDDI 211 (518)
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHE
T ss_conf 899999999974881676347898866888948999999973723-4587545575689999999999769999874035
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCC
Q ss_conf 23345433332222222332232222333323222222222222222222222322210333100012212201211354
Q gi|254780602|r 95 IVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPS 174 (400)
Q Consensus 95 ~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~ 174 (400)
.++||.+++|.+++++++++||+||+|.|.||.|...+.++|+++++|+++++++|.||+|+|+++|++|||+|+|||||
T Consensus 212 ~~gnGvSE~i~~am~Alln~GDeVLiP~P~YPlyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT~kTKAIVInNPN 291 (518)
T PRK13355 212 YTGNGVSELINLSMSALLDDGDEVLVPSPDYPLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKITSKTKAIVIINPN 291 (518)
T ss_pred EECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCC
T ss_conf 65477679999999983689998982599997789998860987889874522177889999985357155799996898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-
Q ss_conf 2100001233332111223333320111012211000001223322211123332257414654432234454442211-
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG- 253 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~- 253 (400)
||||.+||++++++|+++| ++||++||+||+|++++|++.+|.|++++.++. .+|+++||||+|+|||||+||++.
T Consensus 292 NPTGAVyS~E~LeeIaeiA-rehdLiIISDEIY~~LvYDg~~h~Siasla~d~--~~It~NG~SKsyaMtGWRiGwmv~s 368 (518)
T PRK13355 292 NPTGALYPKEVLQQIVDIA-REHQLIIFSDEIYDRLVMDGLEHTSIASLAPDL--FCVTFSGLSKSHMIAGFRAGWMMLS 368 (518)
T ss_pred CCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHCCCCCCCCCCHHHCCCCC--EEEEECCCCCCEECCEEEEEEEEEC
T ss_conf 9888788999999999999-985969996230221006898630476708864--5999887766633220113665424
Q ss_pred -HH----HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEE
Q ss_conf -01----226875310012223322222222222234676---4322222211000000024553047760330274089
Q gi|254780602|r 254 -AL----SLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ---DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFY 325 (400)
Q Consensus 254 -~~----~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y 325 (400)
+. ++++.+..+.+ ...|++.+.|.++..+|...+ +++.... .+.+||+++++.|++++|++|.+|+|+||
T Consensus 369 G~~~~a~~~Ie~l~~Las-~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~-rl~erRdlv~e~Ln~IpGvscvkP~GAFY 446 (518)
T PRK13355 369 GNKRHAKDYIEGLNMLAN-MRMCSNVPAQSVVQTALGGHQSVKDYTVPGG-RLYDQRELVYDMLNAIPGISAVKPKAAFY 446 (518)
T ss_pred CCHHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH-HHHHHHHHHHHHHHCCCCCEECCCCEEEE
T ss_conf 858999999999999860-4566368999999998628764899999999-99999999999983599976589981589
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 98626410233211332248989999999987397998350228--9972899962999999999999999998609
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+|++++.. .....+|++||.+||++++|+++||++|| .++||||+|+.+.|+|++|++||++||+++|
T Consensus 447 lFPkID~~-------~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~~pghfRIsyaps~e~L~EA~~RI~~FL~~yr 516 (518)
T PRK13355 447 IFPKIDVK-------IFNIHSDEQFALDLLHEKHILISHGGAFNWDKPDHFRVVYLPRLGMLEETMDELDDFFSYYR 516 (518)
T ss_pred EEEECCCC-------CCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
T ss_conf 95541534-------48998999999999985899995875448999897999927999999999999999999865
No 52
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=0 Score=582.62 Aligned_cols=372 Identities=23% Similarity=0.292 Sum_probs=318.3
Q ss_pred HHHHHHHHHCCC-CHHHHHHHHHHHHHHCC--CCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-----CCCCCCCCCHHH
Q ss_conf 367889873897-58999999999999869--9726656589749889999999999983887-----569987789899
Q gi|254780602|r 2 VFISNILRRVQP-SATLVAAQRVRDLRSKG--IDVLCLTAGEPDFDMPENVKYAVVRAMERGE-----TKYTAVAGISPL 73 (400)
Q Consensus 2 ~~~s~~~~~l~~-s~~~~~~~~~~~~~~~g--~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-----~~Y~~~~G~~~l 73 (400)
|.-|+++.+++| +.+.+|..+++|++++| +|||+||+|+||||+|++|++|++++++++. ++|+++.|+++|
T Consensus 1 ~~~~~~~~~~~~~y~f~~i~~~~~~~~~~~~~~dvI~L~iGePdf~~P~~i~~a~~~ai~~~~~~~~~~gY~~~~G~~~L 80 (402)
T TIGR03542 1 MKRNPHFLKLKSGYLFSEINRRVNEFRKKNPSASVIRLGIGDTTQPLPASVIEAFHEAVDELASEETYRGYGPEQGLPAL 80 (402)
T ss_pred CCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH
T ss_conf 98586655578998608999999999985889985589899989998999999999999712246786777974064999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 999999864210133332233233454333322222223322322223333232222222222222222222--------
Q gi|254780602|r 74 REAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQ-------- 145 (400)
Q Consensus 74 R~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~-------- 145 (400)
|++||+++ ++..+++|+|++|+|++++++. +.++++|||+|++++|+|+.|...+.++|++++.++..
T Consensus 81 Reaia~~~---~~~~~~~d~I~vt~Ga~~~l~~-l~a~l~pGD~Vii~~P~y~~Y~~~~~~~g~~~~~~~~~~~~~~~~~ 156 (402)
T TIGR03542 81 REAIAEND---YRGRISPEEIFISDGAKCDIGR-LQSIFGSDNTVAVQDPVYPAYVDTAVMTGRAGFADDTGQYRGIVYL 156 (402)
T ss_pred HHHHHHHH---HCCCCCHHHEEECCCCHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEC
T ss_conf 99999997---5689988996777782999999-9998399998998388881579999985995301356655672567
Q ss_pred ---CCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf ---22322210333100012212201211354210000123333211122333332011101221100000122332221
Q gi|254780602|r 146 ---QDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVN 222 (400)
Q Consensus 146 ---~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~ 222 (400)
++++|.+++.+ .+++|+|+|||||||||.||+++++++|+++| ++||++||+||+|++++|++..+.++.+
T Consensus 157 ~~~~e~~~~~~~~~-----~~ktk~iiln~P~NPTG~v~s~eel~~i~~la-~~~~i~iIsDEiY~~~~~~~~~~~s~~~ 230 (402)
T TIGR03542 157 PCTKENGFIPELPE-----ERKIDIIYLCSPNNPTGTVLTKEQLKELVDYA-NAHGSLILFDAAYSAFISDPSIPHSIYE 230 (402)
T ss_pred CCCHHHCCCCCCCC-----CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCHHHHHCCCCCCCCCEE
T ss_conf 67624385722234-----55735999899979887568999999999998-7507079602228876168987620111
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH--------HHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 112333225741465443223445444221101226--------87531001222332222222222223467-643222
Q gi|254780602|r 223 VEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI--------KSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVN 293 (400)
Q Consensus 223 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li--------~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~ 293 (400)
+ ++..+++|+++||||+|+|||||+||+++|++++ +.+.+.......+++.+.|.++.+++... ..+..+
T Consensus 231 ~-~~~~~~~I~i~S~SK~~~m~G~RiG~~i~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~aal~~~~~~~~~~ 309 (402)
T TIGR03542 231 I-EGAKECAIEINSFSKSLGFTGVRLGWTVVPKELTYADGHSVIQDWERRLCTTFNGASYPVQRAAEAAYAGEGLQPILE 309 (402)
T ss_pred C-CCCCCEEEECCCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
T ss_conf 3-665213673167624027834054021125877542279999999999876257755999999999973788599999
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--C
Q ss_conf 22211000000024553047760330274089986264102332113322489899999999873979983502289--9
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--G 371 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~ 371 (400)
.++.|++||+.+.+.|++ .|+++..|+|+||+|++++. ..+|++|+.+|++++||+++||+.||. +
T Consensus 310 ~~~~~~~~~~~l~~~l~~-~g~~~~~~~ga~yl~~~~~~-----------~~~~~~~~~~ll~e~~V~vvPG~~FG~~g~ 377 (402)
T TIGR03542 310 AISYYMENARILREALEA-AGFKVYGGENAPYLWVKTPE-----------GISSWDFFDFLLYQYHIVGTPGSGFGSSGE 377 (402)
T ss_pred HHHHHHHHHHHHHHHHHH-CCCEEECCCCCEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCHHHCCCCC
T ss_conf 999999999999998875-69576079973489787899-----------989899999999859999976447689998
Q ss_pred CEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 7289996299999999999999999
Q gi|254780602|r 372 PSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 372 ~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
+||||||+.++|+|++|++||+++|
T Consensus 378 g~vRls~a~~~e~l~ea~~Rl~~~L 402 (402)
T TIGR03542 378 GFVRFSAFGKRENIVAACERIKHAL 402 (402)
T ss_pred CEEEEEEECCHHHHHHHHHHHHHHC
T ss_conf 9699997299999999999999759
No 53
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=580.64 Aligned_cols=363 Identities=23% Similarity=0.354 Sum_probs=317.1
Q ss_pred HCCCCHHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 38975899999999999986-99726656589749889999999999983887569987789899999999864210133
Q gi|254780602|r 10 RVQPSATLVAAQRVRDLRSK-GIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 10 ~l~~s~~~~~~~~~~~~~~~-g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~ 88 (400)
.++||++.++.+++++++++ |+|||+||+|+|||++|+.|++|++++.. +.++|+++.|.|+||++||+||++++|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~dvi~L~iG~pdf~~P~~i~~A~~~~~~-~~~~Y~~~~G~peLR~Aia~~~~~~~g~~ 80 (376)
T PRK05839 2 TFEPYPFEKLRALLKEITPNKKGELLDLTIGEPQFETPKFIQDALKNNAH-LLNKYPKSAGEEELREAQRGFFKRRFNIE 80 (376)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99997299999999741404899848796889999989999999998644-48977998782999999999999986899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 33223323345433332222222--3322322223333232222222222222222222223222103331000122122
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFNALMAT--VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~~~~~~--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
+++++|++|+|++++|+.+...+ .++||.|++++|+|+.|...+..+|++++.+|+.++++|.+|+++.+ .+++|
T Consensus 81 v~~~~I~vt~Ga~~al~~~~~~~l~~~~~~~i~~p~P~y~~y~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~---~~~tk 157 (376)
T PRK05839 81 LKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKSLYMNLTKENDFTPSLNEKE---LQEVD 157 (376)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHH---HHCCC
T ss_conf 980249981788999999999984579998899789876325899986168632424640258886411876---50589
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC----CCCCCEEEEECCCCCCCC
Q ss_conf 0121135421000012333321112233333201110122110000012233222111----233322574146544322
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE----PSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~----~~~~~~~i~~~S~SK~~~ 242 (400)
+|+|||||||||.+||++++++|+++|. +||++||+||+|+++.+ +.+++++.... ...++++|+++||||+|+
T Consensus 158 ~iilnsP~NPTG~v~s~eel~~i~~la~-~~~~~iisDEiY~~l~~-~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~ 235 (376)
T PRK05839 158 LVILNSPNNPTGRTLSLEELISWVKLAL-KYDFILINDECYSEIYE-NTPPPSLLEASILAGNESFKNVLVINSISKRSS 235 (376)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHC-CCEEEEEEECCHHHHHC-CCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCC
T ss_conf 9998899899882363999999987514-73699998068288637-999876888656514553253799923203201
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC
Q ss_conf 34454442211012268753100122233222222222222346764322222211000000024553047760330274
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG 322 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g 322 (400)
+||||+||+++++++++++.+++++..++.+.+.|.++..++.+ +++++.+++.|++|++.+.+. +.+..|+|
T Consensus 236 ~~G~RiG~i~~~~~~i~~~~~~~~~~~~~~~~~~q~aa~~a~~~-~~~~~~~r~~~~~~~~~~~~~------l~~~~P~g 308 (376)
T PRK05839 236 APGLRSGFIAGDSSILKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHAEFFRNIYAKNLKLAREI------LGITIPPY 308 (376)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHH------CCCCCCCE
T ss_conf 46540699978999999999865643678519999999999729-668999999999999999875------39888980
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC----CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 089986264102332113322489899999999873979983502289----9728999629999999999999999986
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH----GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~----~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
+||+|++++ ++++|+++|++++||+++||+.||. ++||||||+.+++.|++|++||++|+++
T Consensus 309 ~fy~~~~~~--------------d~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 309 TFYVWLPVQ--------------NDENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALVYDTPKLKKALERIKTYREN 374 (376)
T ss_pred EEEEEEECC--------------CHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
T ss_conf 379986689--------------989999999980999997740017999989969999708899999999999999986
Q ss_pred C
Q ss_conf 0
Q gi|254780602|r 399 L 399 (400)
Q Consensus 399 l 399 (400)
.
T Consensus 375 ~ 375 (376)
T PRK05839 375 H 375 (376)
T ss_pred C
T ss_conf 6
No 54
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=100.00 E-value=0 Score=575.21 Aligned_cols=374 Identities=26% Similarity=0.454 Sum_probs=341.1
Q ss_pred HHHHHHHHHHHHHHC--CCCEEECCCCCCC----CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH-----
Q ss_conf 899999999999986--9972665658974----9889999999999983887-569987789899999999864-----
Q gi|254780602|r 15 ATLVAAQRVRDLRSK--GIDVLCLTAGEPD----FDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFR----- 82 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~--g~~ii~l~~G~p~----~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~----- 82 (400)
+++.+......--.. ++.||.|++|||+ |+|+++..||+.++++.+. ++|+|+.|.++.|+|||+||+
T Consensus 20 ~iR~i~~~~~~~~~~~~~Kp~i~L~~GDPs~f~~lrT~~ea~~Av~~al~Sg~~NgYap~~G~~~AR~AvA~y~~~sfvh 99 (424)
T TIGR01265 20 PIRKIVDSLKVSPNPEDVKPVIPLSHGDPSVFGNLRTAPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSNSFVH 99 (424)
T ss_pred CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCEEE
T ss_conf 28999998413788888830015888788877788887899999999983478567664368678889999996622212
Q ss_pred -HHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHC
Q ss_conf -210133332233233454333322222223-32232222333323222222222222222222-222322210333100
Q gi|254780602|r 83 -RDNDLHYTSDQIIVGTGAKHVIFNALMATV-NMGDEVLIPRPYWVSYPDMVALCGGIPVFVDT-QQDDNFQVSPEKLEQ 159 (400)
Q Consensus 83 -~~~g~~~~~e~I~it~G~~~~l~~~~~~~~-~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~ 159 (400)
++-...+++|+|++|+|++|||.+++.+++ +||+.||+|.|+||.|...++..|..++++++ -+|++|++|++.|++
T Consensus 100 n~~~~~~l~a~DV~ltsGCsqAIe~~I~aLA~~pG~NILvPRPGfP~Y~t~A~~~~lEvr~ydLdlPe~~WeiDL~~le~ 179 (424)
T TIGR01265 100 NQRLPGKLSADDVVLTSGCSQAIEIVIEALAQNPGANILVPRPGFPLYDTRAAFSGLEVRLYDLDLPEKDWEIDLDGLES 179 (424)
T ss_pred CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHH
T ss_conf 57888875766448847722689999999726898835568777866899997718720002467888752364789987
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC----CCCCCCCCCCCCCCCEEEEEC
Q ss_conf 0122122012113542100001233332111223333320111012211000001----223322211123332257414
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRN----CQFSNIVNVEPSLYERTLVVN 235 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~----~~~~s~~~~~~~~~~~~i~~~ 235 (400)
++++||++++++||+||||+||+++.|++|+++| ++++++||+||+|++++|.| .+|.|++.+....+ +|+++
T Consensus 180 l~DekT~A~vv~NP~NPCGsVF~~~HL~k~~~~A-~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~a~f~~~VP--vl~lG 256 (424)
T TIGR01265 180 LADEKTVAIVVINPSNPCGSVFSRDHLEKIAEVA-RKLGIPIIADEIYGHLVFGDKDPNAPFVPMASFASIVP--VLSLG 256 (424)
T ss_pred HHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH-HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC--EEEEC
T ss_conf 6326876999847566788887888899999999-87098268776316414488978886223003578688--68863
Q ss_pred CCCCCCCCCCCCCCCCCCHH--------HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHH
Q ss_conf 65443223445444221101--------2268753100122233222222222222346-76432222221100000002
Q gi|254780602|r 236 GVSKAYAMTGLRIGYAAGAL--------SLIKSMIVLQGQQTSGACSIAQWAAVEALNG-PQDFVVNNRKIFEYRRDLCV 306 (400)
Q Consensus 236 S~SK~~~~~G~RiG~~v~~~--------~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~~~ 306 (400)
|+||.|-+||||+||++... .++..+.++.+ ...+++++.|.|+-..|+. +++|+...+..++++.++.+
T Consensus 257 gisKrW~VPGWRlGWi~~~Dp~gi~~~~k~~~gl~~~~~-~~~gP~Ti~QgALP~IL~~Tp~efF~~~~~~lk~na~l~y 335 (424)
T TIGR01265 257 GISKRWVVPGWRLGWIIVHDPHGILRDTKVLQGLKNVLQ-LILGPATIVQGALPDILENTPQEFFDKKISVLKENAELCY 335 (424)
T ss_pred CHHCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHC-CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 101123277622432778888775444403389899842-3478157899999999851687688999999885188999
Q ss_pred HHHHCCCCCEEEE-CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHH
Q ss_conf 4553047760330-274089986264102332113322489899999999873979983502289972899962999999
Q gi|254780602|r 307 AQLQGVPGIRYMI-PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAIL 385 (400)
Q Consensus 307 ~~L~~~~g~~~~~-p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l 385 (400)
+.|++++|+.+.. |+|+||+|+++.-.. ...++||.+||++|++|+.|.+.||+.||.+||+||+|+++.+.+
T Consensus 336 ~~L~~ipg~~c~~KP~G~MY~mvkl~~~~------~~~ikdD~dFc~kL~~EESv~~LPG~~f~~pnw~Rit~t~~~~~~ 409 (424)
T TIGR01265 336 EELKDIPGLTCPKKPEGSMYLMVKLELEL------LEEIKDDVDFCEKLVKEESVICLPGSAFGLPNWVRITITVPKSML 409 (424)
T ss_pred HHHHCCCCCCCCCCCCCCEEEHHHCCHHH------CCCCCCCHHHHHHHHHHCCCEECCCEEECCCCCEEEEECCCHHHH
T ss_conf 99734887647648887500020101653------446464189999998737633546002559984799852767789
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999986
Q gi|254780602|r 386 EEACVRIKRFCHS 398 (400)
Q Consensus 386 ~~al~rl~~~l~~ 398 (400)
+||++|||.||++
T Consensus 410 ~Ea~~Rik~FC~R 422 (424)
T TIGR01265 410 EEALERIKEFCER 422 (424)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999876303
No 55
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=0 Score=563.56 Aligned_cols=357 Identities=22% Similarity=0.301 Sum_probs=312.8
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 89873897589999999999998699726656589749889999999999983887569987789899999999864210
Q gi|254780602|r 6 NILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDN 85 (400)
Q Consensus 6 ~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~ 85 (400)
.++.+|.+|++..+....++++++|.|||+|++|+||||+|+.|++|+.++. +.++|++++|.++||++||+||++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vI~l~iG~Pd~p~P~~v~~a~~~a~--~~~~Y~~~~G~~~LReAIa~~~~~~~ 79 (364)
T PRK07865 2 PVSASLPDFPWDTLAPAKARAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAA--DAPGYPTTAGTPELREAIVAWLARRY 79 (364)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 7511289985999999999998789983985698998998999999999624--89998998887999999999999983
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 133-33223323345433332222222-3322322223333232222222222222222222223222103331000122
Q gi|254780602|r 86 DLH-YTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 86 g~~-~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
|+. +++++|++|+|++++|.++...+ ++|||+|++++|+|+.|...++++|++++.++ .+++....
T Consensus 80 g~~~~~~~~V~vt~Ga~~~l~~l~~~l~~~pGD~Vlip~P~Yp~y~~~~~~~g~~~v~~d------------~~~~~~~~ 147 (364)
T PRK07865 80 GVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVVPELAYPTYEVGARLAGATVVRAD------------SLTELGPQ 147 (364)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCEEEECC------------CHHHCCCC
T ss_conf 989899687997698899999999997079999899866786019999998198656107------------88775987
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC--CCCCCCCEEEEECCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221--1123332257414654432
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVN--VEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~--~~~~~~~~~i~~~S~SK~~ 241 (400)
+++++++||||||||.+|+.+++++|+++| +++|++||+||+|++|+|++.++ +++. +.++..+++|+++||||+|
T Consensus 148 ~~~li~lnsP~NPTG~v~s~e~l~~l~~la-~~~~i~vi~DE~Y~~l~~~~~~~-s~l~p~~~~~~~~~vi~i~S~SK~~ 225 (364)
T PRK07865 148 TPALIWLNSPSNPTGRVLGVDHLRKVVAWA-RERGAVVASDECYLGLGWDAEPV-SVLDPRVCGGDHTGLLAVHSLSKQS 225 (364)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCEEEEEECCCHHHHCCCCCCC-CCCCHHHCCCCCCCEEEEECCCCCC
T ss_conf 752999899969855117699999999997-76718998254257642589886-5138644277757579994365230
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 23445444221101226875310012223322222222222234676432222221100000002455304776033027
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
++||||+||+++++++++++.+++++...+++.+.|.++..+|++ ++++.++++.|++||+.+.+.|++. |+++..|+
T Consensus 226 ~~~GlRiG~i~~~~~li~~l~~~~~~~~~~~~~~~Q~a~~aal~~-~~~~~~~~~~y~~rr~~l~~~L~~~-g~~~~~p~ 303 (364)
T PRK07865 226 NLAGYRAGFVAGDPALVAELLAVRKHAGMMVPAPVQAAMVAALGD-DAHVREQRERYARRRAVLLPALEAA-GFTVDHSE 303 (364)
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC
T ss_conf 677744899967999999999999855023789999999999579-3999999999999999999999867-97662699
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 40899862641023321133224898999999998739799835022899--72899962999999999999999
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~~ 394 (400)
||||+|++.+ .++.++++.| .++||+++||+.||.. +||||+|+.++|+|++|++||+.
T Consensus 304 G~fylw~~~~-------------~~~~~~~~~l-~e~gV~v~PG~~Fg~~g~~~vRls~~~~~e~l~ea~~RLaA 364 (364)
T PRK07865 304 AGLYLWATRG-------------EDCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLTA 364 (364)
T ss_pred CEEEEEEECC-------------CCHHHHHHHH-HHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_conf 2279988889-------------9999999999-97998991887436899986999965989999999998683
No 56
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=0 Score=556.89 Aligned_cols=351 Identities=23% Similarity=0.312 Sum_probs=308.9
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CC
Q ss_conf 89758999999999999869972665658974988999999999998388756998778989999999986421013-33
Q gi|254780602|r 11 VQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDL-HY 89 (400)
Q Consensus 11 l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~-~~ 89 (400)
|+.|++..+.+.+++++++|.+||+||+|+||||+|+.|++|++++.+. ++|+++.|.++||++||+||++++|+ .+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~vI~L~iG~Pd~p~p~~i~~a~~~a~~~--~~Y~~~~G~~eLReaia~~~~~~~g~~~~ 78 (357)
T TIGR03539 1 LPDFPWDSLAPYKAKAASHPDGIVDLSVGTPVDPVPPLIRAALAAAADA--PGYPQTWGTPELREAIVDWLERRRGVPGL 78 (357)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 9987599999999988868999288879999999899999999971247--99899847799999999999997199979
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCE
Q ss_conf 3223323345433332222222-332232222333323222222222222222222222322210333100012212201
Q gi|254780602|r 90 TSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWL 168 (400)
Q Consensus 90 ~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i 168 (400)
++++|++|+|++++|..+...+ ++|||+|++++|+|+.|...+.+.|++++.++ .+++...+++|+|
T Consensus 79 ~~~~I~vt~G~~~al~~l~~~l~~~pGD~Vli~~P~y~~y~~~~~~~g~~~v~~d------------~~~~~~~~~~k~i 146 (357)
T TIGR03539 79 DPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD------------DPTELDPVGPDLI 146 (357)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECC------------CHHHCCCCCCEEE
T ss_conf 9575998688799999999997079999899788877008999998599898238------------8666797785499
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC-CCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 21135421000012333321112233333201110122110000012233222-11123332257414654432234454
Q gi|254780602|r 169 FLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV-NVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 169 ~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~-~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
++||||||||.+|+++++++|+++| +++|++||+||+|.+++|++.++..+. ....+..+++|+++||||+|++||||
T Consensus 147 ~l~~P~NPTG~v~s~~~l~~l~~~a-~~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~SK~~~~~G~R 225 (357)
T TIGR03539 147 WLNSPGNPTGRVLSVDELRAIVAWA-RERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYR 225 (357)
T ss_pred EECCCCCCCHHCCCHHHHHHHHHHC-CCCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEECCCCCCCCCCE
T ss_conf 9899989623208288999998732-055589952332476535898843028645376757679996153100455612
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEE
Q ss_conf 44221101226875310012223322222222222234676432222221100000002455304776033027408998
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLY 327 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~ 327 (400)
+||+++++++++++.+++++...+++.+.|.++.++|.+ ++|+.+.++.|++||+.+.+.|++. |+++.+|+||||+|
T Consensus 226 iG~~~~~~~li~~l~~~~~~~~~~~~~~~q~a~~~al~~-~~~~~~~~~~~~~rr~~l~~~L~~~-g~~~~~p~g~~y~~ 303 (357)
T TIGR03539 226 AGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGD-DGHVAEQKARYAARRAQLKPALEKA-GFRIDHSEAGLYLW 303 (357)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCEEEEEE
T ss_conf 899967999999999999856777889999999999569-2789999999999999999999857-97762688069998
Q ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHH
Q ss_conf 6264102332113322489899999999873979983502289--9728999629999999999999
Q gi|254780602|r 328 PSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRI 392 (400)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl 392 (400)
++.+ .+++++++.| .++||+++||+.||. ++||||+|+.++|+|++|++||
T Consensus 304 ~~~~-------------~~~~~~~~~l-~e~gV~v~PG~~Fg~~g~~~vRis~~~~~e~l~eal~Rl 356 (357)
T TIGR03539 304 ATRG-------------EDAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred EECC-------------CCHHHHHHHH-HHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHC
T ss_conf 7589-------------9999999999-969989947874478999979999729999999999857
No 57
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=552.52 Aligned_cols=366 Identities=22% Similarity=0.344 Sum_probs=323.6
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 73897589999999999998699726656589749889999999999983887-56998778989999999986421013
Q gi|254780602|r 9 RRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRDNDL 87 (400)
Q Consensus 9 ~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~ 87 (400)
++++||.+..+...++++.+.. |||+|++|+|+|+||+.|++|+.++++++. ++|++..|+++||++||+++ |
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~-diI~L~~~e~~~~~p~~v~~a~~~~~~~~~~~~Y~~~~g~~~Lr~aia~~~----~- 74 (375)
T PRK06225 1 EKVPPSGADTINDFFDELFKKP-ELIWLGQNTNHLHPHPEVRDAMIRAAKEGEYNKYAPPEGFEELRELILADL----G- 74 (375)
T ss_pred CCCCCCHHHHHHHHHHHHHCCC-CEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHH----C-
T ss_conf 9979871589999999971799-906899998998857999999999964898788799635899999999986----8-
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHCCCCCCC
Q ss_conf 33322-3323345433332222222332232222333323222222222222222222-222322210333100012212
Q gi|254780602|r 88 HYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDT-QQDDNFQVSPEKLEQAITPKT 165 (400)
Q Consensus 88 ~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~ 165 (400)
++++ +|++|+|++++|.++++++++|||+|++++|+|+.|...++..|++++.+|+ .++++|.+|+|++++++++++
T Consensus 75 -~~~~~ei~vt~G~~~~l~~~~~a~~~pGD~vl~~~P~y~~y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~~i~~~t 153 (375)
T PRK06225 75 -LDDDFDALVTAGATESLYLVIRAFLSPGTNTVTSDPGYKIIDNFANRFGAEVIEVPIYSEECDYKLTPEALKENVDEET 153 (375)
T ss_pred -CCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCCCC
T ss_conf -8999749982788999999999977998989984898335999999849905745766854688789999996288888
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 20121135421000012333321112233333201110122110000012233222111233322574146544322344
Q gi|254780602|r 166 KWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 166 k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
|++++||||||||.+++.+++++|+++| ++++++||+||+|.++.++. +.+ ... ..+++|+++||||+|+|||
T Consensus 154 k~i~l~nPnNPTG~v~s~~~l~~l~~~a-~~~~i~ii~DE~Y~~f~~~~--~~~-~~~---~~~~~iv~~S~SK~~~~~G 226 (375)
T PRK06225 154 KLIVLIDPLNPLGSSYTREEIKEFAEIA-RDNDAYLVHDCTYRDFAREH--TLA-AEY---APEGTVTIYSFSKIFGLAG 226 (375)
T ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCHHHHHHCCCCC--CCH-HHH---CCCCEEEECCCCHHCCCHH
T ss_conf 2899829989988878899999999999-86277000022133206788--723-453---7787599823605135734
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-EECCCCE
Q ss_conf 544422110122687531001222332222222222223467643222222110000000245530477603-3027408
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY-MIPDGAF 324 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~-~~p~g~~ 324 (400)
||+||+++++++++++.+.+. ...+++.+.|.+++++|...++|++++++.++++|+.+.+.+++++|+.+ ..|.+|+
T Consensus 227 ~RiG~~i~~~~~i~~l~~~~~-~~~~~~~~~q~aa~aal~~~~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~~p~~g~ 305 (375)
T PRK06225 227 LRIGAVVAAPDLLEQVAKYVV-SDLGANVIAQEAAIAGLKVKSEWIERIRREDFRNQALIKEAVDEIEGVFLPVYPSHAN 305 (375)
T ss_pred HHHHHHCCCHHHHHHHHHHHC-CCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCE
T ss_conf 405141079999999998743-8788789999999999848999999999999999999999985373885167079745
Q ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 9986264102332113322489899999999873979983502289---972899962999999999999999998609
Q gi|254780602|r 325 YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---GPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 325 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
|+|+++.+. ..++.+|++.|+ ++||+++||..|+. ++||||||++++|++++|++||++++++||
T Consensus 306 f~~~~~~~~----------g~~~~~~~~~l~-e~gV~v~pG~~~~~~~g~~~iRis~~~~~e~l~~a~~rl~~~l~~lr 373 (375)
T PRK06225 306 MLVIDTSEA----------GIRPEDLVEYLL-ERKIFVRQGTYTSKRFGDRFIRVSFSIPREWVERFCEEFPDVVATLR 373 (375)
T ss_pred EEEEECCCC----------CCCHHHHHHHHH-HCCEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 999986688----------989999999999-78909968986788789992999970489999999999999999864
No 58
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=0 Score=547.11 Aligned_cols=343 Identities=26% Similarity=0.431 Sum_probs=311.6
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 7266565897498899999999999838875699877898999999998642101333322-332334543333222222
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSD-QIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e-~I~it~G~~~~l~~~~~~ 110 (400)
+||+|++|+|+||+|+.+++|+++++.+ .++|+++.|+++||++||+|+++++|+++++| +|++|+|++++|++++++
T Consensus 1 ~ii~l~~g~P~~p~P~~i~~al~~a~~~-~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~~~~~~ 79 (350)
T TIGR03537 1 RLFDFGTGDPKEPTPPIIRNALKNAVPE-VSQYPSAAGTKALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLV 79 (350)
T ss_pred CEEECCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHH
T ss_conf 9578769899999879999999996021-589989847499999999999998689989787799878838999999999
Q ss_pred CCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 2332232---2223333232222222222222222222223222103331000122122012113542100001233332
Q gi|254780602|r 111 TVNMGDE---VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLR 187 (400)
Q Consensus 111 ~~~~Gd~---Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~ 187 (400)
+++|||+ |++++|+|+.|...+...|++++.+|++++++|.+|++++++.+.+++|++++||||||||.+|++++++
T Consensus 80 ~~~~gd~~~~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~g~~~d~e~l~~~~~~~~~~i~l~nP~NPTG~v~s~~~l~ 159 (350)
T TIGR03537 80 FIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTPVKLKEEDGFLLRLEKVDKEILKETKIVWINYPHNPTGAVAPRSYLE 159 (350)
T ss_pred HCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf 73888778769994698730699999769989997535544887799999974666871999899989836476999999
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 11122333332011101221100000122332221112333225741465443223445444221101226875310012
Q gi|254780602|r 188 ALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQ 267 (400)
Q Consensus 188 ~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~ 267 (400)
+|+++| ++++++||+||+|.++.|++.+ .+.... ..+++|+++||||+|++||||+||+++++++++.+.+++.+
T Consensus 160 ~l~~~a-~~~~~~vi~DE~Y~~l~~~~~~-~~~~~~---~~~~~i~~~S~SK~~~~pGlR~G~~~~~~~li~~~~~~~~~ 234 (350)
T TIGR03537 160 ETIAIC-QEHNIILCSDECYTEIYFGEPP-HSALEV---GMENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLKKLRAN 234 (350)
T ss_pred HHHHHH-HCCCEEEEEEHHHHHHHCCCCC-CCHHHH---CCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
T ss_conf 999863-2369079843122455348998-775563---46877999667545046775599997899999999998620
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf 22332222222222223467643222222110000000245530477603302740899862641023321133224898
Q gi|254780602|r 268 QTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTD 347 (400)
Q Consensus 268 ~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~ 347 (400)
...+.+.+.|.++..++. .+.|+.+.++.|+++|+.+.+.|++ .|+++..|+||||+|+++++ ..++
T Consensus 235 ~~~~~~~~~q~a~~~~~~-~~~~~~~~~~~~~~~r~~~~~~l~~-~g~~~~~p~g~~~~w~~~~~-----------~~~~ 301 (350)
T TIGR03537 235 FGVASPDFVQAAAKAAWS-DDSHVIERRKIFRRKRDLFLEFFNK-KGLEYLYPDATFYLWVKVPN-----------GISS 301 (350)
T ss_pred CCCCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEEECCCCEEEEEEECCC-----------CCCH
T ss_conf 677728999999999956-8099999999999999999999864-89888268822599897999-----------9899
Q ss_pred HHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 99999999873979983502289--972899962999999999999999
Q gi|254780602|r 348 LDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 348 ~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
.+|+.+|+ ++||+++||+.||. ++|+||+|+.+.|+++||++||++
T Consensus 302 ~~~~~~ll-~~gV~v~pG~~Fg~~~~~~~Rl~~~~~~e~l~ealrrl~~ 349 (350)
T TIGR03537 302 KDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRIWES 349 (350)
T ss_pred HHHHHHHH-HCCEEEECCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHC
T ss_conf 99999999-7998997673118999986999972899999999999861
No 59
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=100.00 E-value=0 Score=536.30 Aligned_cols=345 Identities=27% Similarity=0.366 Sum_probs=314.5
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 9726656589749889999999999983887-5699877898999999998642101333322-3323345433332222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRDNDLHYTSD-QIIVGTGAKHVIFNAL 108 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e-~I~it~G~~~~l~~~~ 108 (400)
.|+|+|++|+|++++||.|++|++++++.+. ++|++++|+++||++||+|+++++|+++++| +|++|+|+++++.+++
T Consensus 1 ~d~i~l~~~~~~~~~~p~v~~A~~~a~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~~~~l~~~~ 80 (351)
T pfam00155 1 TDKINLGSNEYLGDTLPAVAKAEKDALAGGTRNLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGAGANIEALI 80 (351)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHH
T ss_conf 97089338999999889999999999749999807981878999999999860102999994748998113999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 22233223222233332322222222222222222222232221033310001221220121135421000012333321
Q gi|254780602|r 109 MATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRA 188 (400)
Q Consensus 109 ~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~ 188 (400)
+++++|||.|++++|+|+.|...++.+|+++++++++++++|.+|+++|++++++++|+|++||||||||.+++.+++++
T Consensus 81 ~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPTG~~~~~~~l~~ 160 (351)
T pfam00155 81 FLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPLYDSNDFHLDFDALEAALKEKPKVVLHESPHNPTGTVAPLEELEK 160 (351)
T ss_pred HHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHH
T ss_conf 99669949999889986889999998399778984564347798999999754159869998899198777768899999
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 11223333320111012211000001223322211123332257414654432234454442211012268753100122
Q gi|254780602|r 189 LADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQ 268 (400)
Q Consensus 189 i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~ 268 (400)
|+++| ++++++||+||+|.++.|++..+.+...... ..+++|+++||||+|++||||+||+++++++++.+.+.+..
T Consensus 161 l~~~a-~~~~~~ii~DE~Y~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R~G~i~~~~~~i~~l~~~~~~- 237 (351)
T pfam00155 161 LLDLA-KEHNILLLVDEAYAGFVFGSPDAVATRALLA-EGPNLLVVGSFSKAFGLAGWRVGYILGNAAVISQLRKLARP- 237 (351)
T ss_pred HHHHH-CCCCEEEEEECCCCCEECCCCCCCCHHHHCC-CCCCEEEEECCHHHCCCCCCCEEEEEECHHHHHHHHHHHCC-
T ss_conf 98653-0288899982663331527988861333114-57867999136152379351559999899999999997166-
Q ss_pred CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 2332222222222223467---6432222221100000002455304776033027408998626410233211332248
Q gi|254780602|r 269 TSGACSIAQWAAVEALNGP---QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIR 345 (400)
Q Consensus 269 ~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~ 345 (400)
.+.+++.|.++.+++... .+|+.+.++.|+++|+.+.+.|++. |+++.+|+||||+|++++. .
T Consensus 238 -~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~p~g~~~~~~~~~~------------~ 303 (351)
T pfam00155 238 -FYSSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDGLEAA-GLSVLPSQAGFFLLTGLDP------------E 303 (351)
T ss_pred -CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCEEEEEEECCC------------C
T ss_conf -8747899999999995845568999999999999999999999878-9857279944999997873------------2
Q ss_pred CHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE-CCHHHHHHHHHHH
Q ss_conf 9899999999873979983502289972899962-9999999999999
Q gi|254780602|r 346 TDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA-VSDAILEEACVRI 392 (400)
Q Consensus 346 ~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~-~~~e~l~~al~rl 392 (400)
++.+|+.+|++++||+++||+.||.++|+||||+ .++|+++++++||
T Consensus 304 ~~~~~~~~Ll~~~gV~v~pG~~fg~~~~iRis~a~~s~e~i~~~~~rl 351 (351)
T pfam00155 304 TAKELAQVLLEEVGVYVTPGSSPGVPGWLRITVAGGTEEELEELLEAI 351 (351)
T ss_pred CHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHC
T ss_conf 299999999975989997788889999089981789999999999419
No 60
>KOG0257 consensus
Probab=100.00 E-value=0 Score=540.06 Aligned_cols=384 Identities=28% Similarity=0.457 Sum_probs=340.4
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE-CCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266-5658974988999999999998388-756998778989999999986
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLC-LTAGEPDFDMPENVKYAVVRAMERG-ETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~-l~~G~p~~~~p~~i~~a~~~al~~~-~~~Y~~~~G~~~lR~aia~~~ 81 (400)
-++++...+|+.+-++.+.+.|.+ +.+ |++|+||+|+|+.|.+++++++++. .++|+...|+|+||+++++.|
T Consensus 8 ~~~~l~~~~~~vw~e~~~la~e~~-----~~~~LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~ 82 (420)
T KOG0257 8 RNRNLSTSKPYVWTEINRLAAEHK-----VPNPLGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAY 82 (420)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCC-----CCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHH
T ss_conf 300025557717999999998627-----987466788899974899999998742530022346679467899999998
Q ss_pred HHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHH
Q ss_conf 4210133332-233233454333322222223322322223333232222222222222222222------223222103
Q gi|254780602|r 82 RRDNDLHYTS-DQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQ------QDDNFQVSP 154 (400)
Q Consensus 82 ~~~~g~~~~~-e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~------~~~~~~~d~ 154 (400)
+..+|...++ ++|++|+|+.++|+.++++++++||+|++.+|+|+.|.....++|++++++++. ....|.+|+
T Consensus 83 se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~ 162 (420)
T KOG0257 83 SEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDP 162 (420)
T ss_pred HHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCH
T ss_conf 88735555786657995382378999999871899879993575122456776448842440565344665576666896
Q ss_pred HHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE
Q ss_conf 33100012212201211354210000123333211122333332011101221100000122332221112333225741
Q gi|254780602|r 155 EKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVV 234 (400)
Q Consensus 155 ~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~ 234 (400)
++++.++++|||+|++||||||||.++|+++|++|+++|. +||++||+||+|.+++|++.+|++++++ |++++|+|++
T Consensus 163 ~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~-k~~~lvisDevYe~~v~d~~~h~r~asl-Pgm~ertitv 240 (420)
T KOG0257 163 EELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCK-KHGLLVISDEVYEWLVYDGNKHIRIASL-PGMYERTITV 240 (420)
T ss_pred HHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHH-HCCEEEEEHHHHHHHHHCCCCCEEEECC-CCHHHEEEEE
T ss_conf 9998643677647999489998673057999999999998-7897999825747882178765146227-7622447885
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCCCCCCCCCCCCCHH
Q ss_conf 465443223445444221101226875310012223322222222222234676--------432222221100000002
Q gi|254780602|r 235 NGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ--------DFVVNNRKIFEYRRDLCV 306 (400)
Q Consensus 235 ~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--------~~~~~~~~~~~~~r~~~~ 306 (400)
+||||+|+++|||+||+++|+.++.....++++....++++.|.|.+.++...+ .++.++.+.|++||+.+.
T Consensus 241 gS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~ 320 (420)
T KOG0257 241 GSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILA 320 (420)
T ss_pred CCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 14521000034565346454876464787864552026807789999987400201687620689987999999999999
Q ss_pred HHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCEEEECCCCCCCCC-------EEEEEE
Q ss_conf 455304776033027408998626410233211332-248989999999987397998350228997-------289996
Q gi|254780602|r 307 AQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGD-VIRTDLDFVNGLLEIEKVAVVQGSSFGHGP-------SIRISY 378 (400)
Q Consensus 307 ~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~-------~iRis~ 378 (400)
+.|.++ |+++..|+|+||+|+|++........... ...+|..|+.+|+++.||.++|++.||.++ ++|++|
T Consensus 321 k~L~~l-g~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~ 399 (420)
T KOG0257 321 KALEEL-GLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCF 399 (420)
T ss_pred HHHHHC-CCCCCCCCCCEEEEEECCCCCCCCCCHHHCCCCCCEEEEHHHHCCCCEEEECCHHCCCCHHHHHHHHHHHHHH
T ss_conf 999866-9852268984389995465345786222225777336452130558679947211378355678877788887
Q ss_pred ECCHHHHHHHHHHHHHH
Q ss_conf 29999999999999999
Q gi|254780602|r 379 AVSDAILEEACVRIKRF 395 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~ 395 (400)
+...+.|+.|.+||+++
T Consensus 400 ~k~~~~L~~a~e~l~~~ 416 (420)
T KOG0257 400 CKADETLRKAIERLKKL 416 (420)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 75499999999987652
No 61
>PRK07324 transaminase; Validated
Probab=100.00 E-value=0 Score=532.26 Aligned_cols=328 Identities=20% Similarity=0.348 Sum_probs=302.6
Q ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999983887569987789899999999864210133332233233454333322222223322322223333232222
Q gi|254780602|r 51 YAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD 130 (400)
Q Consensus 51 ~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~ 130 (400)
+++.+++.++.++|+++.|.|+||++||++|. ++++|||++|+|+++|+++++.++++|||+|++++|+|+.|..
T Consensus 45 ~~~~~~l~~~~l~Y~~~~G~~~LR~~Ia~~y~-----~v~~d~IlvT~Ga~~Al~l~~~~l~~pGD~Viv~~P~Y~~~~~ 119 (373)
T PRK07324 45 EAFYSQLGDKKLTYGWIEGSPEFKEAVASLYQ-----NVKPDNILQTNGATGANHLVLYALIEPGDHVISVYPTYQQLYD 119 (373)
T ss_pred HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHC-----CCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
T ss_conf 89999872377777888898999999999866-----9986788986878999999999975999989988998577999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 22222222222222222322210333100012212201211354210000123333211122333332011101221100
Q gi|254780602|r 131 MVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHI 210 (400)
Q Consensus 131 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l 210 (400)
+++..|++++.++++++++|.+|+++|+++++++||++++||||||||.++|++++++|+++| ++||++||+||+|.++
T Consensus 120 ~~~~~G~~v~~~~l~~~~~~~~Dl~~l~~~i~~~tkliil~nP~NPTG~v~s~e~l~~l~~la-~~~~i~iisDEiY~~l 198 (373)
T PRK07324 120 IPESLGAEVDYWKLREENGWLPDLDELKRLVRPNTKLICINNANNPTGALMDRAFLEEIVEIA-KSVDAYVLSDEVYRPL 198 (373)
T ss_pred HHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HCCCEEEEECCCCCCC
T ss_conf 999839876540767225988799999961887876999799979889778899999999875-4178599812554223
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00012233222111233322574146544322344544422110122687531001222332222222222223467643
Q gi|254780602|r 211 VYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDF 290 (400)
Q Consensus 211 ~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~ 290 (400)
.+++ +++|+.+ .++++|+++||||+|++||||+||+++|+++++++.+.++++..+++.+.|.++..++++.+.+
T Consensus 199 ~~~~-~~~s~~~----~~~~~I~~~S~SK~~~l~GlRiGwiv~~~~li~~~~~~~~~~~i~~~~~~~~~a~~al~~~~~~ 273 (373)
T PRK07324 199 DEEG-SFPSIAD----LYEKGISTNSLSKTYSLPGIRVGWIATNEEVIDIFRKYRDYTMICAGVFDDMLASLALEHRDAI 273 (373)
T ss_pred CCCC-CCCHHHH----HHHCEEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHH
T ss_conf 5797-5010565----7557589715411256777437999669999999999986535566569999999999683999
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 22222211000000024553047760330274089986264102332113322489899999999873979983502289
Q gi|254780602|r 291 VVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH 370 (400)
Q Consensus 291 ~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~ 370 (400)
+++.++.+++|++.+.+.+++.+++.+..|+||+|+|++++. ..++.+|+.+|++++||+++||+.||.
T Consensus 274 l~~~~~~~~~n~~~l~~~l~~~~~~~~~~P~gg~~~~~~~~~-----------~~~~~~~~~~ll~~~gV~v~PG~~F~~ 342 (373)
T PRK07324 274 LERNRKIVRTNLAILDEWVAKEPRVSYVKPKAVSTSFIKLDV-----------DMDSEEFCEKLLKETGVLLVPGNRFDL 342 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCC-----------CCCHHHHHHHHHHHCCEEEECCCCCCC
T ss_conf 999999999999999999973888537635861479987899-----------989999999999968999974886589
Q ss_pred CCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 972899962999999999999999998609
Q gi|254780602|r 371 GPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 371 ~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+||+||+|+.+++.+++|++||++|+++|.
T Consensus 343 ~g~~Ri~fa~~~~~l~egl~RL~~~l~~l~ 372 (373)
T PRK07324 343 EGHVRIGYCCDTKTLKKGLKKLSEFLRKLD 372 (373)
T ss_pred CCEEEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 994999981989999999999999999736
No 62
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=100.00 E-value=0 Score=526.26 Aligned_cols=381 Identities=26% Similarity=0.438 Sum_probs=339.4
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC----CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH
Q ss_conf 87389758999999999999869972665658974----9889999999999983887-569987789899999999864
Q gi|254780602|r 8 LRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPD----FDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 8 ~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~----~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~ 82 (400)
.....-.|++.|+.-++=--.--|.||.|++|||. +++++...+||+++++.+. +||.|+.|.++.|+|||.||.
T Consensus 9 ~s~~t~NPiR~I~d~~kv~P~PeK~~I~Ls~GDPt~~gnL~~~~~~~~a~~~~v~S~~ynGY~p~vG~~~Ar~aia~~y~ 88 (415)
T TIGR01264 9 HSKNTVNPIRKIVDSLKVKPNPEKPMIKLSIGDPTVFGNLPTSEEAMQAMKESVDSGKYNGYAPTVGALEAREAIAEYYR 88 (415)
T ss_pred HHCCCCCCHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 33363485136765077643447841311157888888998888999999987525660677200134888899999876
Q ss_pred H------HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCHHH
Q ss_conf 2------1013333223323345433332222222332232222333323222222222222222222-22232221033
Q gi|254780602|r 83 R------DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDT-QQDDNFQVSPE 155 (400)
Q Consensus 83 ~------~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~-~~~~~~~~d~~ 155 (400)
. +-.-.+++++|++++|+++||.+++.+++|+||.||||.|+|+.|..+++-.|..+.+|.+ .++++|+.|++
T Consensus 89 ~sfvhn~~~~~~~~a~~Vvl~SGCS~Al~~ai~a~Ad~G~nvLVP~PGFplY~Tlc~~~~i~~~~Y~~d~~d~~w~~DL~ 168 (415)
T TIGR01264 89 NSFVHNKRPDGSIEADDVVLCSGCSHALEMAIEALADAGQNVLVPRPGFPLYETLCKALGIEVKLYNLDLPDEDWEIDLK 168 (415)
T ss_pred HHHHCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHCCCCCCEECCCCCCCHHHHHHH
T ss_conf 31100236687201276477167027899999995379780630788872078864014762000025798733566489
Q ss_pred HHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC----CCCCCCCCCCCCCCCEE
Q ss_conf 31000122122012113542100001233332111223333320111012211000001----22332221112333225
Q gi|254780602|r 156 KLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRN----CQFSNIVNVEPSLYERT 231 (400)
Q Consensus 156 ~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~----~~~~s~~~~~~~~~~~~ 231 (400)
+|++++++|||+|++|||+||||++++++.+++|+.+|.| +.+.||.||+|.+|+|.| .+|.+++++.+..+ +
T Consensus 169 ~l~~LiDd~T~~l~vnNPSNPcGSvF~~~Hl~~l~a~A~~-~~Lpi~ADEIY~~~VF~GkDPnatF~~lA~L~s~VP--~ 245 (415)
T TIGR01264 169 QLESLIDDKTKALIVNNPSNPCGSVFRREHLEELLALAER-LKLPIIADEIYGDMVFKGKDPNATFTPLASLSSKVP--I 245 (415)
T ss_pred HHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCC--E
T ss_conf 8863125674078883757788988787889999999875-387236642025651388678642202023779988--6
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHH------H-HHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 741465443223445444221101------2-26875310012223322222222222234-676432222221100000
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRIGYAAGAL------S-LIKSMIVLQGQQTSGACSIAQWAAVEALN-GPQDFVVNNRKIFEYRRD 303 (400)
Q Consensus 232 i~~~S~SK~~~~~G~RiG~~v~~~------~-li~~l~~~~~~~~~~~~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~r~ 303 (400)
|+++++.|.|-+||||+||++... + +...+.++.+ ...|++++.|-|.-.+|. .+|+|+...+..++++.+
T Consensus 246 ~~cgG~AKr~lVPGWRLGWli~hd~~~~~~~e~~~GL~~ls~-~i~GpntlvQGAl~~iL~~TPq~Yf~~~~~~l~~nA~ 324 (415)
T TIGR01264 246 LSCGGLAKRWLVPGWRLGWLIIHDRKGVLRDEVKDGLKKLSQ-RILGPNTLVQGALPEILLKTPQEYFDGTVSVLESNAM 324 (415)
T ss_pred EEECCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHC-HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 870763200224761102478887888650268899999723-0046201144217988640655677899999874089
Q ss_pred CHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHH
Q ss_conf 00245530477603302740899862641023321133224898999999998739799835022899728999629999
Q gi|254780602|r 304 LCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDA 383 (400)
Q Consensus 304 ~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e 383 (400)
++++.|++++|+....|+|+||++++++-.. ..-+++|.+|+++|++|+.|.+.||+.|..+||+|+.++.+.+
T Consensus 325 ~~y~~La~v~Gl~pv~P~GaMY~m~~i~~e~------F~e~k~Dv~F~~~L~~E~sV~cLPG~~F~~PGf~Rvv~T~P~~ 398 (415)
T TIGR01264 325 LVYEILAEVPGLRPVMPKGAMYMMVGIELEK------FPEFKSDVEFVEKLVEEESVFCLPGSCFEYPGFFRVVLTVPSS 398 (415)
T ss_pred HHHHHHHCCCCCEEECCCCCEEEEEEEECCC------CCCCCCHHHHHHHHHHHCCCEECCHHHHCCCCCEEEEEECCHH
T ss_conf 9998851068861114887558756002001------7772411799999851146304641644589958999707806
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999986
Q gi|254780602|r 384 ILEEACVRIKRFCHS 398 (400)
Q Consensus 384 ~l~~al~rl~~~l~~ 398 (400)
.++||+.||++||+.
T Consensus 399 ~~~EA~~RI~eFC~r 413 (415)
T TIGR01264 399 MMEEACSRIKEFCKR 413 (415)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 789999999998412
No 63
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=0 Score=503.25 Aligned_cols=352 Identities=20% Similarity=0.324 Sum_probs=283.5
Q ss_pred CCCEEECCCCCCCC-C-CCHHHHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 99726656589749-8-89999999999983887-----56998778989999999986421013333223323345433
Q gi|254780602|r 30 GIDVLCLTAGEPDF-D-MPENVKYAVVRAMERGE-----TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 30 g~~ii~l~~G~p~~-~-~p~~i~~a~~~al~~~~-----~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
-.|||+|++|+||+ | +++.+++++.++++++. ++|++++|.++||++||+||++++|+++++|||++|+|+++
T Consensus 29 ~P~vIsl~~G~P~~~p~~~~~~~~a~~~~l~~~~~~~~~~qY~~~~G~~eLReaIA~~~~~~~g~~~~pd~I~vT~Gaqq 108 (416)
T PRK09440 29 TPGAIMLGGGNPAHIPEMEDYFRDLLAELLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPENIALTNGSQS 108 (416)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHH
T ss_conf 99848817968988898229999999999846866654478899987099999999999998489998300998487899
Q ss_pred CCCCCCCCCCCCCCC-----CCCC-CCCCCCCCCCCCCCCC---CCCCCCCCCCCC--CCCHHHHHHCCCCCCCCCEEEC
Q ss_conf 332222222332232-----2223-3332322222222222---222222222232--2210333100012212201211
Q gi|254780602|r 103 VIFNALMATVNMGDE-----VLIP-RPYWVSYPDMVALCGG---IPVFVDTQQDDN--FQVSPEKLEQAITPKTKWLFLN 171 (400)
Q Consensus 103 ~l~~~~~~~~~~Gd~-----Vlv~-~P~y~~y~~~~~~~g~---~~~~v~~~~~~~--~~~d~~~l~~~i~~~~k~i~l~ 171 (400)
||+++++++++|||. |+++ +|+|+.|.......+. ....+...+++. |.+|.++++ +++++|++++|
T Consensus 109 al~l~~~~l~~pgd~~~~~~vl~p~~P~Y~~Y~~~~l~~~~~~~~~p~i~~~~~~~~~~~~d~~~l~--~~~~t~~ii~~ 186 (416)
T PRK09440 109 AFFYLFNLFAGRRADGSLKKILLPLAPEYIGYADAGLEEDLFVSARPNIELLPEGQFKYHVDFEHLD--IDEETGAICVS 186 (416)
T ss_pred HHHHHHHHHCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEECCCEEEECCCCCCCCCCCHHHHH--CCCCCEEEEEC
T ss_conf 9999999964767887764389726986544477775006500005605766875656788989971--77784399977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 35421000012333321112233333201110122110000012233222111233322574146544322344544422
Q gi|254780602|r 172 SPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA 251 (400)
Q Consensus 172 nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 251 (400)
|||||||.+||.+++++|+++| ++||++||+||+|+. .|.+..+. ...+...+++|+++||||. ++||||+||+
T Consensus 187 ~P~NPTG~v~s~e~~~~l~~la-~~~~i~iI~De~Y~~-~~~~~~~~---~~~~~~~~~vI~~~SfSK~-~~pG~RiG~~ 260 (416)
T PRK09440 187 RPTNPTGNVITDEELAKLDALA-RQHNIPLIIDNAYGP-PFPGIIFS---EATPLWNPNIILCMSLSKL-GLPGVRCGIV 260 (416)
T ss_pred CCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCCC-CCCCCCCC---CCCCCCCCCEEEECCCCCC-CCCCCCEEEE
T ss_conf 8989988778899999999999-987958999789877-78763315---5676678988997451120-2865425899
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCCC-CCCCCCCCCCCCHHHHHHC-CCC--CEEEECCCCEE
Q ss_conf 1101226875310012223322222222222234676--4322-2222110000000245530-477--60330274089
Q gi|254780602|r 252 AGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ--DFVV-NNRKIFEYRRDLCVAQLQG-VPG--IRYMIPDGAFY 325 (400)
Q Consensus 252 v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~~-~~~~~~~~~r~~~~~~L~~-~~g--~~~~~p~g~~y 325 (400)
++|+++++++.++++....+++.+.|.++..+|+.++ .+.. .++..|++||+.+.+.|++ +++ +.++.|+||||
T Consensus 261 vap~~~i~~l~~~~~~~~~~~~~~~Q~~a~~~l~~~~~~~~~~~~~r~~y~~rr~~~~~~L~~~l~~~~~~~~~P~Ggff 340 (416)
T PRK09440 261 IANEEIIEALTNMNGIISLAPGRLGPAIAAELIESGDLLRLSETVIRPFYRQKVQLAIALLRRALPDLPCLIHKPEGAIF 340 (416)
T ss_pred ECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEE
T ss_conf 68999999999999763488569999999999977968999999999999999999999999857898148857982469
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---------CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 986264102332113322489899999999873979983502289---------97289996299999999999999999
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH---------GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~---------~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
+|+++++. ..++.+|++.+ +++||+++||+.|+. .+++||||+.++|+|++|++||++++
T Consensus 341 ~wv~~p~~----------~~~~~~l~~~l-~e~gV~vvPG~~F~~g~~~~~~~~~~~lRlsfa~~~e~i~egi~RLa~~i 409 (416)
T PRK09440 341 LWLWFKDL----------PITTEELYQRL-KARGVLIVPGHYFFPGLDEPWPHTHQCIRMSYVQDDEEIEKGIAILAEEV 409 (416)
T ss_pred EEEECCCC----------CCCHHHHHHHH-HHCCEEEEECHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 99988999----------98999999999-97997998264317999876557788699982799999999999999999
Q ss_pred HHCC
Q ss_conf 8609
Q gi|254780602|r 397 HSLQ 400 (400)
Q Consensus 397 ~~l~ 400 (400)
++.+
T Consensus 410 ~~~~ 413 (416)
T PRK09440 410 EKAY 413 (416)
T ss_pred HHHH
T ss_conf 9998
No 64
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=0 Score=494.98 Aligned_cols=346 Identities=34% Similarity=0.521 Sum_probs=311.1
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 665658974988999999999998-3887569987789899999999864210133332233233454333322222223
Q gi|254780602|r 34 LCLTAGEPDFDMPENVKYAVVRAM-ERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV 112 (400)
Q Consensus 34 i~l~~G~p~~~~p~~i~~a~~~al-~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~ 112 (400)
|+|++|+|++++|+.+.+++.+.. ....++|.+..|.++||++||+|+++++|+++++|+|++|+|++++|.+++++++
T Consensus 1 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~ 80 (350)
T cd00609 1 IDLSIGEPDFPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALL 80 (350)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHHHHC
T ss_conf 95858689998799999999999747467587999881999999999987873899747978992699999999999980
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32232222333323222222222222222222222322210333100012212201211354210000123333211122
Q gi|254780602|r 113 NMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADV 192 (400)
Q Consensus 113 ~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~ 192 (400)
+|||+|++++|+|+.|...++..|.+++.++++++++|.++.+.++.+.++++|++++||||||||.+++.+++++|+++
T Consensus 81 ~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~P~NPtG~~~~~~~l~~l~~~ 160 (350)
T cd00609 81 NPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAEL 160 (350)
T ss_pred CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHH
T ss_conf 89898999479863069999982994125565600386766899998568899789856994972546337889899999
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH-HHHHHHHHCCCCCCC
Q ss_conf 3333320111012211000001223322211123332257414654432234454442211012-268753100122233
Q gi|254780602|r 193 LVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS-LIKSMIVLQGQQTSG 271 (400)
Q Consensus 193 ~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-li~~l~~~~~~~~~~ 271 (400)
|. +++++||+||+|.++.|++..+.++... +..+++|+++||||+|++||+|+||++++++ +.+.+.........+
T Consensus 161 a~-~~~~~ii~De~Y~~~~~~~~~~~~~~~~--~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~~~~~~ 237 (350)
T cd00609 161 AK-KHGILIISDEAYAELVYDGEPPPALALL--DAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKLLPYTTSG 237 (350)
T ss_pred HH-HCCCEEEEECCCHHHCCCCCCCCHHHHC--CCCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCC
T ss_conf 86-2386268853412203699888967855--77980899911723037945377999988899999998624214678
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22222222222234676432222221100000002455304776033027408998626410233211332248989999
Q gi|254780602|r 272 ACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFV 351 (400)
Q Consensus 272 ~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (400)
++.+.|.++..++++.++|+++.++.++++|+.+.+.|++..+..+..|+||||+|+++++. ++.+++
T Consensus 238 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~~g~f~~~~~~~~------------~~~~~~ 305 (350)
T cd00609 238 PSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEG------------DDEEFL 305 (350)
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCC------------CHHHHH
T ss_conf 98799999999986829999999999999999999999857996120799553998989999------------829999
Q ss_pred HHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 9999873979983502289--972899962999999999999999
Q gi|254780602|r 352 NGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 352 ~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
.++++++||+++||..||. ++|+||+|+.+++++++|++||++
T Consensus 306 ~~~l~~~gv~v~~g~~f~~~~~~~iRl~~~~~~~~~~~~~~rl~~ 350 (350)
T cd00609 306 ERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLAE 350 (350)
T ss_pred HHHHHHCCEEEEECHHHCCCCCCEEEEEECCCHHHHHHHHHHHCC
T ss_conf 999997999999245648899897999963989999999998578
No 65
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=489.52 Aligned_cols=381 Identities=24% Similarity=0.380 Sum_probs=335.8
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 93678898738975899999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|+.+.....++... .+.+.+.. .+.|+++||+++|||++||.|++|+++.+++|.+||+ .+..++-++|++|
T Consensus 1 ~~~F~~~~~r~~t~---s~KWd~~~---g~~DvlPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w 72 (388)
T COG1168 1 MYDFDTVIERLGTN---SLKWDAHP---GNEDVLPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHW 72 (388)
T ss_pred CCCHHHHHHHCCCC---CEECCCCC---CCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC--CCCHHHHHHHHHH
T ss_conf 97534556642887---50025568---9888413432004678887999999999865877887--8877899999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222-22322210333100
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQ-QDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~ 159 (400)
.++++++++++|.|++++|...+|..++++++.|||.|++.+|.|+.+...++..|.+++..|+. .+++|.+|+++|++
T Consensus 73 ~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~ 152 (388)
T COG1168 73 FKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEK 152 (388)
T ss_pred HHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHH
T ss_conf 99713777885528983751276999999837699826964888618999875169679746643469847752999999
Q ss_pred CCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 012-2122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 160 AIT-PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 160 ~i~-~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
++. +++|+++|||||||||+||++++|.+|.++|.| ||+.||+||+|.+|+|.|.+|.+++++.+...+++|++.|.|
T Consensus 153 ~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~k-h~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saS 231 (388)
T COG1168 153 AFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLR-HGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSAS 231 (388)
T ss_pred HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECC
T ss_conf 9843776089993799999864369999999999998-399898303356612169876654326955432359984052
Q ss_pred CCCCCCCCCCCCCCCH-HHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC-CCCC
Q ss_conf 4322344544422110-122687-531001222332222222222223467643222222110000000245530-4776
Q gi|254780602|r 239 KAYAMTGLRIGYAAGA-LSLIKS-MIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG-VPGI 315 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~-~~li~~-l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~-~~g~ 315 (400)
|+|+++|+++++++.+ +++.++ +.++......++|.+.-.|...+++.+++|+.+++++++.|++++.+.|++ +|++
T Consensus 232 KtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v 311 (388)
T COG1168 232 KTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV 311 (388)
T ss_pred CCCCCHHHHHEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 21560444421478348899999999998733799846889999999972649999999999998999999998659874
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC--CEEEEEEECCHHHHHHHHHHHH
Q ss_conf 03302740899862641023321133224898999999998739799835022899--7289996299999999999999
Q gi|254780602|r 316 RYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG--PSIRISYAVSDAILEEACVRIK 393 (400)
Q Consensus 316 ~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~--~~iRis~~~~~e~l~~al~rl~ 393 (400)
++..|||+|.+|+||+.+. .++.++.+.|+++.+|++.+|+.||.. ||+|++|++|...+++|++||+
T Consensus 312 ~v~~p~gTYL~WLD~r~l~----------l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~ 381 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELG----------LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLK 381 (388)
T ss_pred EEECCCCCEEEEEECCCCC----------CCHHHHHHHHHHHHCEECCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHH
T ss_conf 7866887566653200238----------985789999997515713578756767874588863798899999999999
Q ss_pred HHHHHCC
Q ss_conf 9998609
Q gi|254780602|r 394 RFCHSLQ 400 (400)
Q Consensus 394 ~~l~~l~ 400 (400)
+.++.++
T Consensus 382 ~al~~~~ 388 (388)
T COG1168 382 RALKKRR 388 (388)
T ss_pred HHHHCCC
T ss_conf 9985259
No 66
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=0 Score=483.56 Aligned_cols=362 Identities=23% Similarity=0.371 Sum_probs=309.7
Q ss_pred CHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 93678898738975-89999999999998699726656589749889999999999983887569987789899999999
Q gi|254780602|r 1 MVFISNILRRVQPS-ATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 1 m~~~s~~~~~l~~s-~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
|-.+.+.+++|+|+ +...+.+.++++...+.|||+|+.|+++|+|||.+++++.+++++ .+.||+. +.++||++||+
T Consensus 4 ~~~~~~~~~~~~~y~~g~~~~~~a~~~g~~~~~ii~ls~nenp~gp~p~v~~a~~~~~~~-~~~YPd~-~~~~Lr~aiA~ 81 (369)
T PRK00950 4 MEKIRAIVKEIKEYVPGKSKEEIARNYGIDPESIIKLGSNENPLGPSPKAVEALIDEAPN-IHQYPEP-DAPELREAISK 81 (369)
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHC-CCCCCCC-CHHHHHHHHHH
T ss_conf 566668863799989999999999980989689888129899867889999999987532-5879998-88999999999
Q ss_pred HHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 864210133332233233-4543333222222233223222233332322222222222222222222232221033310
Q gi|254780602|r 80 KFRRDNDLHYTSDQIIVG-TGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLE 158 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~it-~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (400)
|+ ++++|+|+++ +|++++|.++++++++|||+|++++|+|+.|...++..|++++.++++++++|.+|+|++.
T Consensus 82 ~~------gv~~e~ii~~gnGs~e~i~~l~~~~~~~Gd~vl~~~P~y~~Y~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~ 155 (369)
T PRK00950 82 YT------GVPVENIIVGGDGADEIIDVLMRILIDEGDEVIIPIPTFTYYEISARACGAKPVYAKFDREEDFKLDVESVL 155 (369)
T ss_pred HH------CCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHH
T ss_conf 86------819758799756499999999999957999999898873036999998398202236771249988999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 00122122012113542100001233332111223333320111012211000001223322211123332257414654
Q gi|254780602|r 159 QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 159 ~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
+.+++++|++++||||||||.+++.++++++++. ++++||+||+|.+|. +....++ ... ++++++++|||
T Consensus 156 ~~i~~~tklv~l~nPnNPTG~~~~~~el~~l~~~----~~~~vv~DEaY~ef~--~~~~~~l---~~~-~~n~iv~~SfS 225 (369)
T PRK00950 156 NAITDKTKIIFLCTPNNPTGNLIPEEDIRKIVES----TDALVFVDEAYIEFA--EYDLTEL---ALE-YDNVLVLRTFS 225 (369)
T ss_pred HHCCCCCEEEEEECCCCCCCEEECHHHHHHHHHC----CCEEEEECCCHHHHC--CCCHHHH---HHH-CCCEEEEEECC
T ss_conf 7367676089980899987832479998789871----887999424267525--7971567---874-58658984121
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 43223445444221101226875310012223322222222222234676432222221100000002455304776033
Q gi|254780602|r 239 KAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
|+|++||||+||+++++++++.+.+++. ..+++.+.|.++.++|+ .++|+++.++.++++|+.+.+.|++++++++.
T Consensus 226 K~~~laGlRlGy~i~~~~li~~l~~~~~--~~~v~~~aq~aa~aaL~-~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~ 302 (369)
T PRK00950 226 KVFGLAGMRIGYGIMPKWIIEYMMRIKP--PFSLTRLSQAAAIAALR-DKEFIEKSIELGIESREYLYEGLKKFKPLKVY 302 (369)
T ss_pred HHHHCCCCEEEEEECCHHHHHHHHHHCC--CCCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEC
T ss_conf 5540577504676469999999998568--75706999999999950-95889999999999999999999857997787
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0274089986264102332113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
|.+++|+|+++++ ..++.+|+++|++ +||+|+||+.|+. ++|+|||+++++|+ +.-++.|++.+
T Consensus 303 -ps~anFil~~~~~-----------~~~~~~~~~~Ll~-~gI~Vr~g~~f~~~~~~~iRisigt~~en-~~ll~al~~il 368 (369)
T PRK00950 303 -PSEANYVLVDVKP-----------GMTAKEFTEELLK-KGVIVRDCTSFEGLGDYYIRVSIGTLEEN-ERFLEILKEIV 368 (369)
T ss_pred -CCCCEEEEEECCC-----------CCCHHHHHHHHHH-CCEEEEECCCCCCCCCCEEEEEECCHHHH-HHHHHHHHHHH
T ss_conf -8986189998999-----------9999999999996-99599968777778989899980899999-99999999985
Q ss_pred H
Q ss_conf 8
Q gi|254780602|r 397 H 397 (400)
Q Consensus 397 ~ 397 (400)
+
T Consensus 369 ~ 369 (369)
T PRK00950 369 E 369 (369)
T ss_pred C
T ss_conf 9
No 67
>KOG0259 consensus
Probab=100.00 E-value=0 Score=474.06 Aligned_cols=359 Identities=26% Similarity=0.475 Sum_probs=327.1
Q ss_pred CCCEEECCCCCCC----CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9972665658974----9889999999999983887-5699877898999999998642101333322332334543333
Q gi|254780602|r 30 GIDVLCLTAGEPD----FDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 30 g~~ii~l~~G~p~----~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
++.||+|+.|+|+ |++.+...+|+.++++.|. ++|+|+.|.+..|+|||+|+++...-.+++++|++|+|++|||
T Consensus 60 ~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAI 139 (447)
T KOG0259 60 KKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGCSQAI 139 (447)
T ss_pred CCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHH
T ss_conf 85031378899876666668889999999999638877768765648899999998631898756747669955636999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 22222223322322223333232222222222222222222223222103331000122122012113542100001233
Q gi|254780602|r 105 FNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQN 184 (400)
Q Consensus 105 ~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~ 184 (400)
.+++.++.+||..||+|.|+||.|...+...|.++.++++-+|++|++|++.+++.++++|.+++++|||||+|.|||.+
T Consensus 140 e~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NPcGnVys~~ 219 (447)
T KOG0259 140 ELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNPCGNVYSED 219 (447)
T ss_pred HHHHHHHCCCCCCEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCCEECHHHHHHHHCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 99999743899866547999846887663258436763256765615316889976446706999967999986515199
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH--------H
Q ss_conf 33211122333332011101221100000122332221112333225741465443223445444221101--------2
Q gi|254780602|r 185 RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGAL--------S 256 (400)
Q Consensus 185 ~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~--------~ 256 (400)
.|++|++.| +++++.||+||+|.+++|++.+|.++..+.+.. .+|+++|+||.|-+||||+||++.+. .
T Consensus 220 HL~kiae~A-~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV--PVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~ 296 (447)
T KOG0259 220 HLKKIAETA-KKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV--PVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTK 296 (447)
T ss_pred HHHHHHHHH-HHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCC--CEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCHH
T ss_conf 999999999-984976976111231331799730013305657--36861542356404773034689756665424418
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEECCCCEEEEEECCCCC
Q ss_conf 268753100122233222222222222346-764322222211000000024553047760-330274089986264102
Q gi|254780602|r 257 LIKSMIVLQGQQTSGACSIAQWAAVEALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMIPDGAFYLYPSCQDLI 334 (400)
Q Consensus 257 li~~l~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~p~g~~y~~~~~~~~~ 334 (400)
+++.+.++.+ ...+++++.|.|.-..|+. +++++......++.+.++.++.|+++|++. ..+|+|.+|+|++++-..
T Consensus 297 ~~q~~~~~~~-~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~ 375 (447)
T KOG0259 297 VVQGIKNFLD-IIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSL 375 (447)
T ss_pred HHHHHHHHHH-CCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHH
T ss_conf 9999999985-459950859877588987483999999999987627999999845987666758875158985266654
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 3321133224898999999998739799835022899728999629999999999999999986
Q gi|254780602|r 335 GKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
.....||.+||..|.+|..|.+.||.+||.++|+|++++.+.+.++||+.||+.|+++
T Consensus 376 ------~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259 376 ------FPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred ------HCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf ------0022450899999863142687251203678848999705737899999999999986
No 68
>PRK03566 consensus
Probab=100.00 E-value=0 Score=472.73 Aligned_cols=356 Identities=22% Similarity=0.334 Sum_probs=300.2
Q ss_pred HHHHHHCCCCHHHH-HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 88987389758999-99999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 5 SNILRRVQPSATLV-AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 5 s~~~~~l~~s~~~~-~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
-+.+++|+|+..-. +.+.++++. -.++|+|+.+++.++||+.+++++++++++ .+.||+..+ .+||++||+|+
T Consensus 7 ~~~~~~l~~y~~g~~~~~~~~~~g--~~~~i~l~~NeNp~gp~~~v~~a~~~~~~~-~~~YPd~~~-~~Lr~aiA~~~-- 80 (365)
T PRK03566 7 PPGVRALSPYQPGKPIEELARELG--LSDIVKLASNENPLGPSPKALEAIRAALSE-LHRYPDGNG-FELKAALAEKL-- 80 (365)
T ss_pred CHHHCCCCCCCCCCCHHHHHHHHC--CCCEEEEECCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCH-HHHHHHHHHHH--
T ss_conf 887527799889989899998709--988788218899989899999999998886-166959668-99999999997--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
++++|||++|+|++++|.++++++++|||+|++++|+|+.|...++.+|++++.+|+. +|.+|++++.+++++
T Consensus 81 ----gv~~~~I~v~~Gs~e~i~l~~~a~~~pGd~Vl~~~P~y~~Y~~~~~~~g~~~~~vp~~---~~~~dl~~l~~~i~~ 153 (365)
T PRK03566 81 ----GVPPEQITLGNGSNDLLELLARAFLGPGDEIIYSQYAFAVYPLATQAVGARAVEVPAK---DYGHDLEAMLAAITP 153 (365)
T ss_pred ----CCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCC---CCCCCHHHHHHHCCC
T ss_conf ----8486679987789999999999855899876766886689999999819748996176---767695889986388
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|+|++||||||||+++++++++++++.+ ++ +++||+||+|.+|++++..+.++..+ .. ++++|+++||||+|+|
T Consensus 154 ~~klv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vV~DEaY~ef~~~~~~~~~~~~~-~~-~~n~iv~rSfSK~~gl 229 (365)
T PRK03566 154 KTRLVFIANPNNPTGTFLSAAELEAFLAKV-PP-DVLVVLDEAYTEYAAPEERPDSLAWL-KK-YPNLVVSRTFSKAYGL 229 (365)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHC-CC-CCEEEEECCHHHHCCCCCCCCHHHHH-HH-CCCEEEEEECCHHCCC
T ss_conf 886899779999887735706589999754-56-74498524577750477777788876-41-3772598545452057
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++++++++.+.++++ ..+++++.|.++..+|+ .++|+++.++.++++|+.+.+.|+++ |+++.++ +|
T Consensus 230 aGlRiGy~ia~~~li~~l~~~~~--p~~vn~~aq~aa~aaL~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ps-~~ 304 (365)
T PRK03566 230 AGLRVGYAVSNPEIADLLNRVRQ--PFNVNSLALAAAVAALD-DDDFLAKSRELNRAGMQQLEAGFDAL-GLEYIPS-KG 304 (365)
T ss_pred CCHHHEEEECCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-CC
T ss_conf 57301410169999999999618--88977999999999958-99999999999998999999999978-7988789-98
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 89986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
.|+|++++ .++.+++++|++ +||+|+||+.||.++|+||++++++|+ +.-++.|++.|+
T Consensus 305 nF~l~~~~-------------~~~~~l~~~L~~-~gV~Vrp~~~fgl~~~lRis~g~~een-~~l~~aL~~il~ 363 (365)
T PRK03566 305 NFVTVDVG-------------RDAAAIYQALLR-QGVIVRPVAGYGMPNHLRVSIGLPEEN-ARFLAALKKVLA 363 (365)
T ss_pred EEEEEECC-------------CCHHHHHHHHHH-CCEEEEECCCCCCCCEEEEEECCHHHH-HHHHHHHHHHHC
T ss_conf 08999789-------------999999999997-791898689899989799995899999-999999999876
No 69
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=0 Score=465.24 Aligned_cols=357 Identities=23% Similarity=0.351 Sum_probs=298.8
Q ss_pred HHHHHCCCCHH-HHHHHHHHHHHHCC-CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89873897589-99999999999869-97266565897498899999999999838875699877898999999998642
Q gi|254780602|r 6 NILRRVQPSAT-LVAAQRVRDLRSKG-IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 6 ~~~~~l~~s~~-~~~~~~~~~~~~~g-~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+.+.+++|+.. ..+.+.+++ .| .|+|+|+.+++.++||+.+++++.+++++ .+.||+..+ .+||++||+++
T Consensus 8 p~i~~~~~y~~g~~~~~~~~~---~g~~~ii~l~~Nenp~gp~~~v~~ai~~~~~~-~~~YPd~~~-~~Lr~aiA~~~-- 80 (367)
T PRK02731 8 PGILDIAPYVPGKPIEELVRE---YGIADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDGSG-FELKAALAEKF-- 80 (367)
T ss_pred CCCCCCCCCCCCCCHHHHHHH---CCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCH-HHHHHHHHHHH--
T ss_conf 212048998999998999986---09887688119899999899999999987755-115959878-99999999997--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
++++|||++|+|++++|.++++++++|||+|++++|+|+.|...++.+|++++.+|. .+|.+|+|++.+++++
T Consensus 81 ----~v~~~~Ilv~nGs~e~i~l~~~a~~~pgd~Vl~~~P~f~~Y~~~a~~~G~~~~~vp~---~~~~~d~~~l~~~i~~ 153 (367)
T PRK02731 81 ----GVDPEQIILGNGSDEILELLARAYLGPGDEVIYSEHAFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTP 153 (367)
T ss_pred ----CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECC---CCCCCCHHHHHHHCCC
T ss_conf ----858111998578999999999998479986444798626899999982988999547---6776596899985587
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||.+++.+++++|++.+ ++ ++++|.||+|.+|++++....++ .+.. .++++|+++||||+|++
T Consensus 154 ~tklv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vviDEaY~ef~~~~~~~~~~-~l~~-~~~n~iv~rSfSK~~gl 229 (367)
T PRK02731 154 RTKLVFIANPNNPTGTYLPAEEVERFLAGV-PP-DVLVVLDEAYAEYVARKDYEDGI-ELVK-EFPNVVVTRTFSKAYGL 229 (367)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEEHHHHHHCCCCCCCCHH-HHHH-HCCCEEEEEECCHHHCC
T ss_conf 886899828999988657569999999854-55-76388411267642576665589-9976-23764799746666516
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++++++++.+.+++. ..+++++.|.++.++|+ .++|+++.++.++++|+.+.+.|+++ |+++.++ +|
T Consensus 230 aGlRlGy~ia~~~~i~~l~~~~~--p~~v~~~aq~aa~aaL~-d~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~ps-~~ 304 (367)
T PRK02731 230 AGLRVGYGIAPPEIIDALNRVRQ--PFNVNSLALAAAVAALD-DDAFVEKSRELNAKGMARLEEFLAEL-GLEYIPS-YG 304 (367)
T ss_pred CCCCEEEEECCHHHHHHHHHHHC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-CC
T ss_conf 88705888669999999999847--66588999999999966-99999999999999999999999978-4988789-86
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 899862641023321133224898999999998739799835022899728999629999999999999999986
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
.|+|++++. ..++.+++++|++ +||+++||+.||.++|+|||+++++| .+..++.|+++|..
T Consensus 305 nFil~~~~~-----------~~~a~~~~~~L~~-~gI~vr~~~~fgl~~~~Risigt~ee-n~~li~al~~~l~e 366 (367)
T PRK02731 305 NFILVDFDD-----------GKDAAAIYEALLK-RGVIVRPLAGYGLPNALRITIGTPEE-NRRFLAALKEFLAQ 366 (367)
T ss_pred EEEEEECCC-----------CCCHHHHHHHHHH-CCEEEEECCCCCCCCEEEEEECCHHH-HHHHHHHHHHHHHH
T ss_conf 189998899-----------9999999999996-89389858888998969999289999-99999999999850
No 70
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=446.54 Aligned_cols=356 Identities=20% Similarity=0.271 Sum_probs=293.9
Q ss_pred HHHHHHHHHCCCCH-HHHHHHHHHHHHHCC-CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 36788987389758-999999999999869-9726656589749889999999999983887569987789899999999
Q gi|254780602|r 2 VFISNILRRVQPSA-TLVAAQRVRDLRSKG-IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 2 ~~~s~~~~~l~~s~-~~~~~~~~~~~~~~g-~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
|.+-+.++.++|+. -..+.+.+++ .| .++|+|+.+++.|++|+.+++++.++++. ...||+.. ..+||++||+
T Consensus 1 ~~~r~~~~~~~~y~~g~~~~~~~~~---~g~~~ii~ls~Nenp~g~~~~v~~a~~~~~~~-~~~YPd~~-~~~Lr~~iA~ 75 (359)
T PRK03158 1 MKVKEQLLGLRPYQPGKPIEEVKRE---YGLSKIVKLASNENPFGCSPRVTEALASEASQ-YALYPDGY-AFELRTKVAK 75 (359)
T ss_pred CCCCHHHCCCCCCCCCCCHHHHHHH---HCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH-CCCCCCCC-HHHHHHHHHH
T ss_conf 9978344389998999998999987---09997689508999999999999999987873-67696988-8999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 86421013333223323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 80 KFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
|+ ++++|||++|+|++++|.++++++++|||+|++++|+|+.|...+...|++++.+|+.. +..|++.+.+
T Consensus 76 ~~------gv~~~~I~v~nGs~e~i~~~~~~~~~~g~~vvi~~P~f~~Y~~~a~~~g~~~~~vpl~d---~~~dl~~~~~ 146 (359)
T PRK03158 76 HL------GVKEEQLIFGNGSDEVIQIISRALLHEGTNTVMANPTFSQYRHNAVIEGAEVREVPLKD---GIHDLDAMLE 146 (359)
T ss_pred HH------CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEECCCCEEEHHHHHHHHCCCEEEEECCCC---CCCCHHHHHH
T ss_conf 86------84867799847889999999999807998111379820555999976285379962677---7669999997
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 01221220121135421000012333321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
.+++++|+|++||||||||++++.++++++++.+ ++ +++||+||+|.+|++++.. ++...+... ++++|+++||||
T Consensus 147 ~i~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vvvDEaY~ef~~~~~~-~~~~~l~~~-~~nviv~rsfSK 222 (359)
T PRK03158 147 AIDENTKIVWICNPNNPTGTYVEKQKLLAFLEKV-PK-SVLVVLDEAYYEYVTAEDY-PQTLPLLEK-YENLMILRTFSK 222 (359)
T ss_pred HCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHC-CC-CEEEEEEHHHHHHHCCCCC-CCHHHHHHH-CCCEEEECCCCH
T ss_conf 5075887899748999988876523489999748-57-7299972278887325786-203567653-256236515654
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 32234454442211012268753100122233222222222222346764322222211000000024553047760330
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
+|+|||||+||+++++++++++.+.+. .++++++.|.++.++|+ .++|+++.++.++++|+.+.+.++.. |+++.+
T Consensus 223 ~~~laGlRlGy~ia~~~li~~l~~~~~--~~~v~~~aq~aa~aal~-d~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~p 298 (359)
T PRK03158 223 AYGLAALRVGYGIADEELIGQLEPARL--PFNTSTIAQAAALAALE-DQAFIQECVKKNAEGLKQYYAFCKEY-GVFYYP 298 (359)
T ss_pred HCCCCCCCCEECCCCHHHHHHHHHHCC--CCCCHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECC
T ss_conf 106888852203189999999998538--86856999999999957-99999999999999999999999868-888999
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022899728999629999999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
++ |.|+|+++. .++.++++.|++ +||+|+||+.||.++|+|||+++++| .+.-++.|++.
T Consensus 299 s~-anF~l~~~~-------------~~~~~~~~~L~~-~gi~Vr~g~~fg~~~~iRIsvgt~~e-n~~ll~aL~~i 358 (359)
T PRK03158 299 SQ-TNFVLIDLG-------------IPGDEVFEYLLK-KGYIVRSGAALGFPTGIRITVGLKEE-NDEIIELLAEL 358 (359)
T ss_pred CC-CCEEEEECC-------------CCHHHHHHHHHH-CCEEEEECCCCCCCCEEEEEECCHHH-HHHHHHHHHHH
T ss_conf 98-508998689-------------999999999981-99399968989998989999489999-99999999986
No 71
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=444.65 Aligned_cols=360 Identities=22% Similarity=0.261 Sum_probs=293.4
Q ss_pred HHHHHHHHCCCCHHH-HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 678898738975899-9999999999869972665658974988999999999998388756998778989999999986
Q gi|254780602|r 3 FISNILRRVQPSATL-VAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~-~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
++-+-+++|+||..- .+.+..+ +..+.++|+|+.++..|+|||.+++++.++++. .+.||+..+ .+||++||+++
T Consensus 11 ~~r~~i~~l~pY~~~~~~~~~~~--~~~~~~~i~L~~NeNP~gpsp~v~~a~~~~~~~-~~rYPd~~~-~~Lr~aiA~~~ 86 (374)
T PRK05166 11 LIRPEVRSLPPYNAGLTIEEVRA--RYHVPRIAKLGSNENPLGPSPALARLFPDIAEL-LRLYPDPQG-RALRAEIAASF 86 (374)
T ss_pred HHCHHHCCCCCCCCCCCHHHHHH--HHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCH-HHHHHHHHHHH
T ss_conf 63766447899999998699998--738998588069999989899999999986875-376979878-99999999996
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
++++|||++|+|++++|.++++++++|||+|++++|+|+.|...++.+|++++.+|++++ |.+|++++.+++
T Consensus 87 ------gv~~~~I~v~nGs~e~i~~~~~a~~~pGd~Vl~~~Ptf~~Y~~~~~~~G~~v~~vpl~~~--~~~d~~~l~~ai 158 (374)
T PRK05166 87 ------GVPTDQIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHEDYPTLMGARVERVTVTPD--LTVDVDALLAAV 158 (374)
T ss_pred ------CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECCCC--CCCCHHHHHHHH
T ss_conf ------838301998568999999999999739998987788777899999982981599736866--797999999861
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf 22122012113542100001233332111223333320111012211000001223322211123332257414654432
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY 241 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~ 241 (400)
++++|+++|||||||||++++++++++|++.| ++ +.+||+||+|.+|++++....++. ...+..+++|+++||||+|
T Consensus 159 ~~~tklv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vvvDEaY~ef~~~~~~~~~~~-~~~~~~~n~IvlrSfSK~~ 235 (374)
T PRK05166 159 ARKPRMLMFSNPMNPVGSWLTPGALARLLDAV-PP-ETLIVVDEAYAEYAAGDDYPSALT-LLKNRGLPWVVLRTFSKAY 235 (374)
T ss_pred CCCCCEEEEECCCCCCCCCCCHHHHHHHHHHC-CC-CEEEEECHHHHHHHCCCCCCCHHH-HHHHCCCCEEEEEECCHHH
T ss_conf 56987899828989987658847799999745-88-739995047899752788664798-8620478779999555655
Q ss_pred CCCCCCCCCC-CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 2344544422-110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 242 AMTGLRIGYA-AGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 242 ~~~G~RiG~~-v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
++||||+||+ ++++++++.+.+.+. ..+++.+.|.++..+|+ .++|+++.++.+.++|+.+.+.|+++ |+++.++
T Consensus 236 glaGlRvGyai~~~~~i~~~l~~~~~--~~~v~~~aq~aa~aaL~-~~~~~~~~~~~~~~~R~~l~~~L~~~-g~~v~ps 311 (374)
T PRK05166 236 GLAGLRIGYGLVSDPSLRAFLDRVRT--PFNANGIAQAAALAALD-DEEHLAKGVALALAERERMKKELAEM-GYRVAPS 311 (374)
T ss_pred HCCCCCEEEEECCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC
T ss_conf 15777504541592999999998349--82869999999999856-99999999999999999999999977-7948998
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
+|. |+|+++. .++.+++++|++ +||+|+||+.||.++|+|||+++++|+ +.-++.|++.+.
T Consensus 312 ~an-Filv~~~-------------~~~~~~~~~L~~-~gI~Vr~~~~~gl~~~lRIsvgt~een-~rll~aL~~il~ 372 (374)
T PRK05166 312 RAN-FLFFDAR-------------TDASALAEALLR-QGVIVKPWKQPGFETYIRVSIGSPEEN-DHFMAALDEVLA 372 (374)
T ss_pred CCE-EEEEECC-------------CCHHHHHHHHHH-CCCEEEECCCCCCCCEEEEEECCHHHH-HHHHHHHHHHHH
T ss_conf 661-8998689-------------999999999984-891998589899999899981899999-999999999985
No 72
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=0 Score=439.09 Aligned_cols=348 Identities=22% Similarity=0.350 Sum_probs=289.8
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+.+.++.|+||.- . ..-.++|+|+.+++.|+|||.+++++.++++ +.+.||+ .|..+||++||+|+
T Consensus 5 ~r~~i~~l~~Y~p----g------~~~~~~i~ls~Nenp~gp~p~v~~ai~~~~~-~~~~YPd-~~~~~Lr~aiA~~~-- 70 (352)
T PRK03321 5 LRPELAGLPAYVP----G------KTVPGAIKLSSNETPFGPLPSVRAAIAEATD-GLNRYPD-NGAVELRAALAEHL-- 70 (352)
T ss_pred CCHHHHCCCCCCC----C------CCCCCCEECCCCCCCCCCCHHHHHHHHHHHH-HCCCCCC-CCHHHHHHHHHHHH--
T ss_conf 0356517999899----8------9999937802969999988999999998653-0677989-98699999999987--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
++++|+|++|+|++++|..+++++++|||+|++++|+|+.|...++.+|++++.+++.++.+ .|++.+.+++++
T Consensus 71 ----~v~~~~I~v~nGs~e~i~~~~~~~~~~gd~Vl~p~P~f~~Y~~~~~~~G~~~~~v~l~~~~~--~dl~~l~~~i~~ 144 (352)
T PRK03321 71 ----GVAPEHVAVGCGSVALCQQLVQATAGPGDEVVFAWRSFEAYPILVQVAGATPVQVPLTDDHT--HDLDAMAAAITD 144 (352)
T ss_pred ----CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCC--CCHHHHHHHCCC
T ss_conf ----87858799874699999999999817979899888853268999998098799986675557--883789986588
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||.++++++++++++.| ++ +++||+||+|.+|++++..+.++ .+..+ ++|+|+++||||.|++
T Consensus 145 ~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~-~~-~~~vvvDEaY~~f~~~~~~~~~~-~~~~~-~~nlivlrSfSK~~gl 220 (352)
T PRK03321 145 RTRLIFVCNPNNPTGTVVTPAALARFVAAV-PA-DVLVVLDEAYVEYIRDGDVPDGL-ELVRD-HPNVVVLRTFSKAYGL 220 (352)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHC-CC-CCEEEEHHHHHHHHHCCCCCCHH-HHHHH-CCEEEEECCCCCCCCC
T ss_conf 875899849999730136837589999755-47-84797224089884277876278-87520-4525540254413378
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||||+||+++++++++.+.+.+. ..+++.+.|.++..+|++ ++++.+.++.+.++|+.+.+.|++ .|+++.+++|.
T Consensus 221 aGlRlGy~ia~~~~i~~l~~~~~--p~~v~~~aq~aa~aaL~~-~~~~~~~~~~~~~~R~~l~~~L~~-~g~~v~ps~an 296 (352)
T PRK03321 221 AGLRVGYAVGHPEVITALRKVAV--PFSVNSLAQAAAIASLEA-ADELLERVDAVVAERDRVSAALRA-AGWTVPPSQAN 296 (352)
T ss_pred CCCCCEEEECCHHHHHHHHHHCC--CCCCHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHH-CCCEECCCCCE
T ss_conf 98853320289999999998458--988559999999999649-299999999999999999999997-85858899874
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+|+++. .++.++++.| .++||+|+| |+. .++|||+++++|+ +.-++.|++|...|
T Consensus 297 -Fi~~~~~-------------~~~~~~~~~L-~~~GIlVR~---~~~-~~~RIsvgt~een-~~ll~Alk~~~~g~ 352 (352)
T PRK03321 297 -FVWLPLG-------------ERTADFAAAA-AEAGVVVRP---FGG-EGVRVTVGAPEEN-DAFLRAARAWRAGL 352 (352)
T ss_pred -EEEEECC-------------CCHHHHHHHH-HHCCEEEEE---CCC-CEEEEEECCHHHH-HHHHHHHHHHHCCC
T ss_conf -9999518-------------9999999999-819939986---699-9189980999999-99999999997249
No 73
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=430.24 Aligned_cols=350 Identities=25% Similarity=0.383 Sum_probs=303.7
Q ss_pred CCEEECCCCCCCCCC--CHHHHHHHHHHHHC---C-CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 972665658974988--99999999999838---8-75699877898999999998642101333322332334543333
Q gi|254780602|r 31 IDVLCLTAGEPDFDM--PENVKYAVVRAMER---G-ETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~--p~~i~~a~~~al~~---~-~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.++++|+.|.|+... -....+++.+.++. . ..+|.++.|.++||++|++|+....|+.+++|||++|+|+++||
T Consensus 89 ~~~i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al 168 (459)
T COG1167 89 PSVIDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQAL 168 (459)
T ss_pred CCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHH
T ss_conf 75547688998810188899999999998505612332268768889999999999999749988830389806499999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-CCCCEEEC-CCCCCCCCCCC
Q ss_conf 22222223322322223333232222222222222222222223222103331000122-12201211-35421000012
Q gi|254780602|r 105 FNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP-KTKWLFLN-SPSNPSGVVYS 182 (400)
Q Consensus 105 ~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~k~i~l~-nP~NPTG~v~s 182 (400)
.++++.+++|||.|++++|+|+...++++..|.+++.+|+++++ +|+|+|++.+.. ++|++|++ +-|||||.+||
T Consensus 169 ~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~G---~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms 245 (459)
T COG1167 169 DLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDEDG---IDPEALEEALAQWKPKAVYVTPTFQNPTGVTMS 245 (459)
T ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCEEEECCCCCC---CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCC
T ss_conf 99999847999999989998289999999869947860678889---897999999850697289978896388987459
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 33332111223333320111012211000001223322211123332257414654432234454442211012268753
Q gi|254780602|r 183 QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMI 262 (400)
Q Consensus 183 ~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~ 262 (400)
.+++++|++++ +++|++||+||.|++|.|++.+.+++.+++. .+|||+++||||+++ ||+|+||+++|+++++++.
T Consensus 246 ~~rR~~Ll~lA-~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~--~~rViy~gSFSK~l~-PglRlG~vv~p~~~~~~~~ 321 (459)
T COG1167 246 LERRKALLALA-EKYDVLIIEDDYYGELRYDGPPPPPLKALDA--PGRVIYLGSFSKTLA-PGLRLGYVVAPPELIEKLL 321 (459)
T ss_pred HHHHHHHHHHH-HHCCCEEEEECCCHHHCCCCCCCCCHHHHCC--CCCEEEECCCHHHHC-CCCCEEEEECCHHHHHHHH
T ss_conf 99999999999-9759879986774332158899834576289--997899913266514-6755499972999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCC--CCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 1001222332222222222223467--64322222211000000024553047--7603302740899862641023321
Q gi|254780602|r 263 VLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVP--GIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 263 ~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~--g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
..+.....+++.+.|.++...+..+ +.|+.++|..|++||+.+.+.|++.. +.++..|+||||+|+++++.
T Consensus 322 ~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~----- 396 (459)
T COG1167 322 RLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG----- 396 (459)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCC-----
T ss_conf 998762569989999999999972859999999999999999999999997478763772699558999986998-----
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEEC-CCCCCC----CCEEEEEEE-CCHHHHHHHHHHHHHHHHHC
Q ss_conf 13322489899999999873979983-502289----972899962-99999999999999999860
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQ-GSSFGH----GPSIRISYA-VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~~Fg~----~~~iRis~~-~~~e~l~~al~rl~~~l~~l 399 (400)
.++.++.... .++||.+.| |..|.. .+++|++|+ .+++++++++++|.+.+..+
T Consensus 397 ------~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~ 456 (459)
T COG1167 397 ------IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREA 456 (459)
T ss_pred ------CCHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------8889999999-98699794588663578988982899889899999999999999999976
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=0 Score=426.39 Aligned_cols=344 Identities=18% Similarity=0.342 Sum_probs=284.0
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999986997266565897498899999999999838875699877898999999998642101333322332334
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
+.+.++++-....|||+|+.+++.+++|+.+++++.+++++ ...||+. +..+||++||+|+ .+++++|++|+
T Consensus 7 i~~~~~~~G~~~~~iidls~NeNP~g~p~~v~~a~~~~~~~-l~~YPd~-~~~~Lr~aiA~~~------gv~~~~I~~gn 78 (354)
T PRK06358 7 INEIARQHGLTKNMILDFSANINPLGVPESVKDAITENLDK-LVEYPDI-DYLELRKRIASFE------QLDLENVILGN 78 (354)
T ss_pred HHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHH-HCCCCCC-CHHHHHHHHHHHH------CCCHHHEEECC
T ss_conf 99999980969464888649998988899999999998766-1018999-7799999999987------83879999868
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 54333322222223322322223333232222222222222222222223222103331000122122012113542100
Q gi|254780602|r 99 GAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSG 178 (400)
Q Consensus 99 G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG 178 (400)
|++++|.++++++ .+++|+++.|+|+.|...++..|++++.+++.++++|.+|.+.++ .+++++|++++||||||||
T Consensus 79 Gs~e~i~~~~~~~--~~~~v~i~~Ptf~~Y~~~~~~~g~~v~~~~l~~~~~~~~~~~~l~-~~~~~~~~v~l~nPnNPTG 155 (354)
T PRK06358 79 GAAEVIFNIVRVL--KPKKVLILAPTFSEYERALKSVDAEVIYYELKEETNFAINEDVLE-KITEEIDLIFLCNPNNPTG 155 (354)
T ss_pred CHHHHHHHHHHHC--CCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHH-HCCCCCCEEEEECCCCCCC
T ss_conf 7899999999861--899699979887999999998498678997770038887999997-4455777899968999866
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH-HHH
Q ss_conf 0012333321112233333201110122110000012233222111233322574146544322344544422110-122
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA-LSL 257 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~-~~l 257 (400)
+++++++++++++.| ++++++||+||+|.+|++++.. .|+...... ++|+|+++||||+|++||||+||++++ +.+
T Consensus 156 ~~~~~~~l~~l~~~~-~~~~~~vviDEaY~ef~~~~~~-~s~~~~~~~-~~nlivlrSfSK~~glaGlRiGy~i~~~~~i 232 (354)
T PRK06358 156 QLISKEELKKILEKC-EKKNIYVIIDEAFMDFVEENET-ISMIKYLEN-FKNLIIIRAFTKFFAIPGLRLGYGLCSNKNL 232 (354)
T ss_pred CCCCHHHHHHHHHHH-HCCCEEEEEECHHHHHHCCCCC-CCHHHHHHH-CCCEEEEEECCHHHCCCCHHEEEEEECCHHH
T ss_conf 406799999999872-0178799996405676368876-667888752-3766899725166367662115654287999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCC
Q ss_conf 68753100122233222222222222346764322222211000000024553047760330274089986264102332
Q gi|254780602|r 258 IKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKK 337 (400)
Q Consensus 258 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~ 337 (400)
++.+.+.+. ..+++++.|.++..+|+ +++|+++.++.++++|+++.+.|++++|+++.+|++. |+|+++.
T Consensus 233 ~~~l~~~~~--p~~vn~~a~~aa~aal~-d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~ps~an-Fvl~~~~------ 302 (354)
T PRK06358 233 IEKLNQMRE--PWSINTFADLAGRVLLE-DKNYIKKTIQWIKKEKEFLYNGLSEFKGLTVYEPSVN-FIFFKLN------ 302 (354)
T ss_pred HHHHHHCCC--CCCHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCE-EEEEEEC------
T ss_conf 999984589--98826999999999952-9999999999999999999999874999688899848-9999839------
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 113322489899999999873979983502289--97289996299999999999999999
Q gi|254780602|r 338 SPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
++.+++++|+ ++||+|+||+.|+. ++|+||++++++| .+.-++.|++.|
T Consensus 303 --------~~~~~~~~L~-~~gIlVr~~~~f~~l~~~~iRisvgt~~e-n~~ll~aL~~iL 353 (354)
T PRK06358 303 --------KPIDLRKELL-LKGILIRSCSNYRGLDENYYRVAVKSRED-NKKLLEALSVIL 353 (354)
T ss_pred --------CHHHHHHHHH-HCCCEEEECCCCCCCCCCEEEEEECCHHH-HHHHHHHHHHHH
T ss_conf --------8799999998-59919997887788899979996289999-999999999974
No 75
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=100.00 E-value=0 Score=427.67 Aligned_cols=363 Identities=22% Similarity=0.342 Sum_probs=305.5
Q ss_pred HHHHHCCCCHH-HHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 89873897589-9999999999986997266565897498899999999999838-875699877898999999998642
Q gi|254780602|r 6 NILRRVQPSAT-LVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMER-GETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 6 ~~~~~l~~s~~-~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+.++.+.||-. ..|-+-+++.--+-.++|.|+..|..|++|+.+++++.+++++ ..+.||++.+ .+||+++|+++.
T Consensus 2 ~~i~~l~pY~~GK~iee~ar~~g~~~~~~ikL~sNEnP~gp~~~~~~~~~~~l~~a~l~RYPdp~~-~~L~~~lA~~~~- 79 (377)
T TIGR01141 2 PKIKNLSPYQPGKPIEEIARELGGKPAEVIKLNSNENPYGPPEKAKEALRAELKEAKLHRYPDPDP-AELKQALAKYLG- 79 (377)
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCH-HHHHHHHHHHHC-
T ss_conf 401014678877851110301378963221413678899888899999999985087867989866-899999999828-
Q ss_pred HCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC-C
Q ss_conf 10133332233233-454333322222223322-32222333323222222222222222222222322210333100-0
Q gi|254780602|r 84 DNDLHYTSDQIIVG-TGAKHVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ-A 160 (400)
Q Consensus 84 ~~g~~~~~e~I~it-~G~~~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~-~ 160 (400)
..+++|||+++ +||.++|.++++++|+|| |.|+++.|+|..|...++..|++++.++++.+..|..|++++.. .
T Consensus 80 ---~~v~~eqi~~GGnGsDe~I~~l~raf~~PGk~~~l~~~Pty~mY~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~ 156 (377)
T TIGR01141 80 ---KKVDPEQILLGGNGSDEIIDLLIRAFLEPGKDAVLVPPPTYSMYEISAKIHGAEVKKVPLDEDADGQLDLEDILVAA 156 (377)
T ss_pred ---CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHH
T ss_conf ---89871403784156068999999985276654577617750036765532071479974056766755537899998
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+.+++|+||||+||||||..++.++++++++.. .+.+.+||.||||.+|+-++ ...+...+..+ ++|+++++||||.
T Consensus 157 ~~~~~kLvF~c~PNNPTG~~~~~~~i~~~l~~~-~~g~~lVV~DEAY~EF~~~~-~~~~~~~ll~~-ypNL~vlRTlSKa 233 (377)
T TIGR01141 157 IDEKPKLVFLCSPNNPTGNLLSREDIEAVLERT-PEGDALVVVDEAYGEFSGEE-DEPSVLPLLAE-YPNLIVLRTLSKA 233 (377)
T ss_pred HHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHC-CCCCEEEEEEECCCCCCCCC-CCCCCCCHHHH-CCCEEEEHHHHHH
T ss_conf 626940899878868867526989999999717-69973899864234578886-77653231420-7987998106788
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCHHHHHHCCCCCE-E
Q ss_conf 2234454442211012268753100122233222222222222346764--322222211000000024553047760-3
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQD--FVVNNRKIFEYRRDLCVAQLQGVPGIR-Y 317 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~--~~~~~~~~~~~~r~~~~~~L~~~~g~~-~ 317 (400)
||++|+||||.++++++++.|.+++. .+++|.++|.+|+++|++ ++ ++++..+...+.|+++++.|+++++++ +
T Consensus 234 fgLAG~R~Gy~~a~~~~i~~l~kvr~--Pfn~~~la~~~A~aAL~~-~~~~~~~~~~~~~~~~Re~l~~~L~~~~~~~~v 310 (377)
T TIGR01141 234 FGLAGLRVGYAIANAEIIDALNKVRA--PFNLSRLAQAAAIAALRD-DDLQFIEKTVEEINAERERLYDELKKLEGLEDV 310 (377)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHCCC--CCCCCHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 77888889886069999999985168--878897999999985271-467999999999998999999998714300014
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CC-CCEEEEEEECCHHHHHHHHHHH
Q ss_conf 302740899862641023321133224898999999998739799835022-89-9728999629999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF-GH-GPSIRISYAVSDAILEEACVRI 392 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F-g~-~~~iRis~~~~~e~l~~al~rl 392 (400)
.+++|-| +.++++. ..++..++++.|+ ++||+|++...| |. ++|+|||.|+++|. ++-++.|
T Consensus 311 ~~S~aNF-~L~~~~~----------~~~~a~~~~~~L~-~~GiivR~~~~~~Gl~~~~lRITvGt~eEn-~~~l~~l 374 (377)
T TIGR01141 311 YPSDANF-VLIRFPR----------GGLDAEALFEALL-EKGIIVRDLNSFPGLLPNCLRITVGTREEN-DRFLEAL 374 (377)
T ss_pred ECCCCCE-EEEECCC----------CCCCHHHHHHHHH-HCCEEEEECCCCCCCCCCCEEEEECCHHHH-HHHHHHH
T ss_conf 2577637-9996277----------6777799999998-678068606557887776268972887999-9999998
No 76
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=422.63 Aligned_cols=349 Identities=19% Similarity=0.292 Sum_probs=288.7
Q ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 67889873897589999999999998699726656589749889999999999983887569987789899999999864
Q gi|254780602|r 3 FISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 3 ~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
++++.+++|+|+..- + +.++.++|+|+.+++.|+|||.+++|+++++.++.+.||+.. ..+||++||+++
T Consensus 4 ~~~p~i~~l~pY~~~----~----~~~~~~ii~L~~NEnP~gpsp~v~~a~~~~~~~~~~~YPd~~-~~~Lr~~iA~~~- 73 (353)
T PRK05387 4 YWSPIVRQLEPYVPG----E----QPKLANLIKLNTNENPYPPSPKVLEAIRAALGDDLRLYPDPD-ATALRQAIAAYY- 73 (353)
T ss_pred CCCCCCCCCCCCCCC----C----CCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-HHHHHHHHHHHH-
T ss_conf 336443468999998----7----679998479409799999999999999996752524799997-899999999997-
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 21013333223323345433332222222332232222333323222222222222222222222322210333100012
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
.+++|+|++|+|+.++|.++++++++|||+|++++|+|+.|...++..|++++.+|+++ +|.+|++++.+
T Consensus 74 -----gv~~~~I~vg~Gs~e~i~~~~~~~~~~gd~Vl~p~Pty~~Y~~~a~~~g~~~~~vp~~~--~~~~~~~~~~~--- 143 (353)
T PRK05387 74 -----GVSPEQVFVGNGSDEVLAHAFLAFFKHDRPLLFPDITYSFYPVYAGLYGIPYEEVPLDD--DFSIDVEDYLR--- 143 (353)
T ss_pred -----CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCC--CCCCCHHHHHC---
T ss_conf -----86858899857899999999999618998664078770369999998095489950564--34579999726---
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
.++.|++||||||||+++++++++++++ ++.+.+||+||+|.+|. +....+ +... ++|+|+++||||.|+
T Consensus 144 -~~~~v~l~nPnNPTG~~~~~~~l~~ll~---~~~~~~vvvDEAY~ef~--~~s~~~---l~~~-~~nlivlrTfSK~~g 213 (353)
T PRK05387 144 -PNGGIIFPNPNAPTGIALPLADIERILA---ANPDSVVVIDEAYVDFG--GESAIP---LIDR-YPNLLVVQTLSKSRS 213 (353)
T ss_pred -CCCEEEEECCCCCCCCCCCHHHHHHHHH---HCCCCEEEEECCHHHCC--CCCHHH---HHHC-CCCEEEEEECCHHHC
T ss_conf -3676998489998788689999999997---48998899605356418--754024---5650-787787630416308
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC
Q ss_conf 34454442211012268753100122-23322222222222234676432222221100000002455304776033027
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQ-TSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
+||||+||+++++++++.+.+++... ..+++.+.|.++.++|+ +++|+++.++.+.+.|+.+.+.|+++ |+++.++
T Consensus 214 laGlRlGy~ia~~~li~~l~~~~~~~~~~~v~~~a~~aa~aal~-d~~~~~~~~~~~~~~R~~l~~~L~~l-g~~v~ps- 290 (353)
T PRK05387 214 LAGLRVGFAIGHPELIEALERVKNSFNSYPLDRLAQAGAIAAIE-DEAYFEETCAKVIATRERLVEELEAL-GFEVLPS- 290 (353)
T ss_pred CCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC-
T ss_conf 77662342106999999999998541677766999999999963-85999999999999999999999968-9878989-
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 40899862641023321133224898999999998739799835022899728999629999999999999999986
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
++.|+|++.++ .++.++++.| .++||+|.++..||.++|+|||+++++ +.+.-++.|++.+.+
T Consensus 291 ~anFvl~~~~~------------~~a~~~~~~L-~~~gI~VR~~~~~~l~~~iRisvgt~e-en~~l~~al~~il~a 353 (353)
T PRK05387 291 AANFVFARHPQ------------HDAAALAAAL-RERGIIVRHFNKPRIDQFLRITIGTDE-ECEALVDALKEILAA 353 (353)
T ss_pred CCCEEEEECCC------------CCHHHHHHHH-HCCCEEEEECCCCCCCCEEEEECCCHH-HHHHHHHHHHHHHCC
T ss_conf 88589998999------------9999999999-809939997998999998999729999-999999999999749
No 77
>PRK04152 consensus
Probab=100.00 E-value=0 Score=419.23 Aligned_cols=359 Identities=19% Similarity=0.276 Sum_probs=289.2
Q ss_pred HHHHHHHHHCCCCH-HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 36788987389758-99999999999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSA-TLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~-~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|++.+.+..++|+. -..+.+.++++--..++||+|+.+++.|++|+.+++++.++++. .+.||+. +..+||++||++
T Consensus 1 ~~~~~~i~~~~~y~~G~~i~~~~~~~g~~p~~ii~ls~NeNP~g~p~~~~~ai~~~~~~-~~~YPd~-~~~~Lr~~iA~~ 78 (364)
T PRK04152 1 MKFNEFLNNLKTYEAGKPIELVVREYGIDPKDVIKLASNENPFGTSPKVIEAIRKNASK-AHLYPDD-SMFELKSALASK 78 (364)
T ss_pred CCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH-CCCCCCC-CHHHHHHHHHHH
T ss_conf 97056653899989999999999982968124788179999999999999999987873-7679996-799999999998
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
+ ++++|||++|+|++++|.++++++++|||+|+++.|+|+.|...++.+|++++.++..+ .|++++.+.
T Consensus 79 ~------gv~~~~I~vgnGs~e~i~~~~~~~~~~g~~vl~~~Ptf~~Y~~~a~~~g~~v~~~~~~~-----~dl~~~~~~ 147 (364)
T PRK04152 79 F------DVESENIIIGAGSDQVIEFAIHAKLNEKSSVLMAGVTFAMYEIYAKQCGAKIYKTQSVE-----HDLNEFLEL 147 (364)
T ss_pred H------CCCHHEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCC-----CCHHHHHHH
T ss_conf 6------95830099856999999999999838998446589872689999998398799668743-----398999998
Q ss_pred C-CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCEEEEECCC
Q ss_conf 1-221220121135421000012333321112233333201110122110000012--2332221112333225741465
Q gi|254780602|r 161 I-TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC--QFSNIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 161 i-~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~--~~~s~~~~~~~~~~~~i~~~S~ 237 (400)
+ ..++|+|++||||||||++++.++++++++.+ .+ +.++|.||+|.+|..... .+.+...+.. .++|+|+++||
T Consensus 148 ~~~~~~~lv~l~nPNNPTG~~~~~~~l~~~~~~~-~~-~~~vvvDEAY~ef~~~~~~~~~~~~~~l~~-~~~nlivlrsf 224 (364)
T PRK04152 148 YKSHKPKIIFLCLPNNPLGECLDASEVYKFIKGI-DE-DTLVVIDAAYMEFAKFKDSKKHIEPKELIK-LFPNVIYLGTF 224 (364)
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHC-CC-CCEEEEEHHHHHHHHCCCCCCCCCHHHHHH-HCCCEEEEECC
T ss_conf 6377985899879999867246651249999754-55-776874167788860377534558899874-27978998326
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 44322344544422110122687531001222332222222222223467643222222110000000245530477603
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY 317 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~ 317 (400)
||.||+||||+||+++++++++.+.+++. .+++++++|.++.++|+ .++|+++.++...+.|+.+.+.++. .|+++
T Consensus 225 SK~~glaGlRlGy~ia~~~~i~~l~k~~~--p~~vn~~a~~aa~~aL~-~~~~~~~~~~~~~~er~~~~~~~~~-~g~~~ 300 (364)
T PRK04152 225 SKAYGLGGMRVGYGIANAEIISALYKLRP--PFNVTTLSLKAAIEALK-DEEFVEKTLENNFKEMKRYEEFAKE-QGIEF 300 (364)
T ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEE
T ss_conf 05237877735201389999999998538--98867999999999937-9999999999999999999999885-88848
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 302740899862641023321133224898999999998739799835022899728999629999999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
.+++|.|++ +.+.. ..++.++++.|++ +||+|++++.||. +++|||+++++|+ +.-++.|++.
T Consensus 301 ~ps~aNFil-~~~~~-----------~~~a~~l~~~L~~-~gI~VR~~~~~g~-~~iRIsvg~~een-~~li~aL~~v 363 (364)
T PRK04152 301 IDSYTNFIT-FFFDE-----------RKNSTEISQKLLK-KGIIVRNLKSYGL-NAIRITIGTPEQN-DRVFEELDKE 363 (364)
T ss_pred CCCCCCEEE-EECCC-----------CCCHHHHHHHHHH-CCEEEEECCCCCC-CEEEEECCCHHHH-HHHHHHHHHH
T ss_conf 999887898-98999-----------9999999999996-8919985798996-9799973999999-9999999975
No 78
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=0 Score=417.38 Aligned_cols=346 Identities=18% Similarity=0.253 Sum_probs=283.5
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999986997266565897498899999999999838875699877898999999998642101333322332334
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
+.+.++++-..-.+||+|+.++..++|||.+++++.+++.+ .+.||+.. ..+||++||+|+ .+++|+|++++
T Consensus 10 i~~~a~~~G~~~~~iidlSsN~NP~gppp~v~~ai~~~~~~-~~~YPd~~-~~~Lr~aiA~~~------gv~~e~I~~gn 81 (358)
T PRK07392 10 LAWAAAIAGCPPSAILDFSASINPLGPPESVIAAIQSALSA-LRHYPDPD-YRELREALAQHH------QLPPEWILPGN 81 (358)
T ss_pred HHHHHHHHCCCHHHCEECCCCCCCCCCCHHHHHHHHHHHHH-HHHCCCCC-HHHHHHHHHHHH------CCCHHHEEECC
T ss_conf 99999982979998466089999989898999999998888-86489956-899999999985------95888898775
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 54333322222223322322223333232222222222222222222223222103331000122122012113542100
Q gi|254780602|r 99 GAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSG 178 (400)
Q Consensus 99 G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG 178 (400)
|++++|.+++++++ +||+|+++.|+|+.|...++.+|++++.+|+.++++|.++.........+++++++|||||||||
T Consensus 82 Gs~Eli~~~~~~~~-~~~~v~i~~Ptf~~Y~~~~~~~g~~v~~vpl~~~~~~~~~~~~~~~~~~~~~~~i~l~nPNNPTG 160 (358)
T PRK07392 82 GAAELLTWAGRELA-QLREVYLLTPAFGDYRRALRAFGATVKELPLPLSGEASLTELQLLPPQLTPNDGLLLNNPHNPTG 160 (358)
T ss_pred CHHHHHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCC
T ss_conf 79999999999975-89869995785189999999839889998577555678205678875589987899768999977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00123333211122333332011101221100000122332221112333225741465443223445444221101226
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI 258 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li 258 (400)
.++++++++++++. + .+||+||+|.+|++++.. .|+..+..+ ++|+|+++||||+|++||||+||++++++++
T Consensus 161 ~~~~~~~l~~l~~~----~-~~vvvDEaY~ef~~~~~~-~s~~~~~~~-~~n~iv~rSfSK~~glaGlRlGy~ia~~~~i 233 (358)
T PRK07392 161 KLWSREAILPLLEQ----F-ALVVVDEAFMDFLPPAAE-QSLIPCLAE-YPNLIILRSLTKFYSLPGLRLGYAIAHPDRL 233 (358)
T ss_pred CCCCHHHHHHHHHC----C-CEEEEECHHHHHCCCCCC-CCHHHHHHC-CCCEEEEEECHHHHHCCCCCCEEEECCHHHH
T ss_conf 65687999988632----8-999995715541688655-678999753-5867999616287657441000002399999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 87531001222332222222222223467643222222110000000245530477603302740899862641023321
Q gi|254780602|r 259 KSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
+.+.+++. ..+++++.|.++.++|+ .++|+++.++.+.++|+.+.+.|++++|+++.++ ++.|+|++++
T Consensus 234 ~~l~~~~~--p~~vn~~a~~aa~aal~-~~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~ps-~anF~l~~~~------- 302 (358)
T PRK07392 234 QRWQQWRD--PWPVNGLAAAAAIAALA-DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPS-AANFLLVQSQ------- 302 (358)
T ss_pred HHHHHHCC--CCCCCHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC-CCEEEEEECC-------
T ss_conf 99998538--87778999999999825-9999999999999999999999971899778888-5049999769-------
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 13322489899999999873979983502289--9728999629999999999999999986
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
.++.+++.+|++++||+|.||+.|+. ++|+|||+++++|+ +.-++.|++.|++
T Consensus 303 ------~~~~~~~~~ll~~~gI~Vr~~~~f~~~g~~~iRisvgt~een-~~li~al~~iLa~ 357 (358)
T PRK07392 303 ------GSALQLQEELLQQHRILIRDCLSFPELGDRYFRVAVRTEAEN-QRLLSALAAILAN 357 (358)
T ss_pred ------CCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHHHH-HHHHHHHHHHHHC
T ss_conf ------999999999997198899868888888999899983999999-9999999999706
No 79
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=409.40 Aligned_cols=359 Identities=21% Similarity=0.304 Sum_probs=292.8
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHH
Q ss_conf 9367889873897589999999999998699726656589749889999999999983887--56998778989999999
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE--TKYTAVAGISPLREAIV 78 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR~aia 78 (400)
|.++.+.+++++||..- +. .....++|.|+.+++.|++|+.+++++.+++.++. +.||+. +..+||++||
T Consensus 2 ~~~~r~~i~~l~~Y~p~----~~---~~~~~~~ikL~~NEnp~g~p~~v~eai~~~~~~~~~~~rYPd~-~~~~Lr~aiA 73 (369)
T PRK02610 2 LPFLRSDLAQLKAYHPH----PS---GDTAPALDRLDTNESPYDLPTDLKQKLAWLYQQGIASNRYPDG-GHLALKQAIA 73 (369)
T ss_pred CCCCCHHHHCCCCCCCC----CC---CCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCC-CHHHHHHHHH
T ss_conf 77545336448999999----86---6678782572398989999989999999998703120659999-8799999999
Q ss_pred HHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 98642101--333322332334543333222222233223-222233332322222222222222222222232221033
Q gi|254780602|r 79 EKFRRDND--LHYTSDQIIVGTGAKHVIFNALMATVNMGD-EVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPE 155 (400)
Q Consensus 79 ~~~~~~~g--~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd-~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~ 155 (400)
+|++...+ +++++|||++|+|+.++|..++.+++.+|+ +|+++.|+|+.|...++..|++++.+++++++ |.+|++
T Consensus 74 ~~~~~~~~~~~~v~~e~I~vgnGs~eli~~l~~a~~~~~~~~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~~~-f~~d~~ 152 (369)
T PRK02610 74 EYVNESTAGSWQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPEN-FEIDLA 152 (369)
T ss_pred HHHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCC-CCCCHH
T ss_conf 8857554555689815699848999999999999954899859967876558999999759627994576436-656989
Q ss_pred HHHCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 3100012----212201211354210000123333211122333332011101221100000122332221112333225
Q gi|254780602|r 156 KLEQAIT----PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERT 231 (400)
Q Consensus 156 ~l~~~i~----~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~ 231 (400)
.+++++. +++|+++|||||||||++++.++++++.+.+ .+++||+||+|.+|. +... .....+ ++|+
T Consensus 153 ~~~~~i~~~~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~---~~~~vvvDEaY~ef~--~~s~---~~~~~~-~~Nl 223 (369)
T PRK02610 153 AAQTAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLP---EDILVVIDEAYFEFS--QTTL---VPELAQ-HPNW 223 (369)
T ss_pred HHHHHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCC---CCEEEEECCCEEECC--CCCC---CHHHHC-CCCE
T ss_conf 999999855598823999789969726567999999998469---976998336760215--5532---102431-7875
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 74146544322344544422110122687531001222332222222222223467643222222110000000245530
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG 311 (400)
Q Consensus 232 i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~ 311 (400)
|+++||||.|+++|||+||+++++++++.+.+++. ..+++++.|.++..+|++ .+++.+.++.+.+.|+.+.+.|++
T Consensus 224 ivlrTfSK~~glaGlRlGy~ia~~~~i~~l~~~~~--p~~v~~~a~~aa~~aL~~-~~~~~~~~~~~~~eR~~l~~~L~~ 300 (369)
T PRK02610 224 VILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRL--PYNLPSFSQAAAQLALEH-RDELLAAIPEILQERDKLYRALQE 300 (369)
T ss_pred EEEECCCHHHCCCCCCCEECCCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89852634406766551311179999999998249--988489999999999769-499999999999999999999986
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHH
Q ss_conf 47760330274089986264102332113322489899999999873979983502289972899962999999999999
Q gi|254780602|r 312 VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVR 391 (400)
Q Consensus 312 ~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~r 391 (400)
++|+++. |..+.|+|++++. ..+..++.+.| .++||+|... .+++|||+++++| .+..++.
T Consensus 301 l~g~~v~-ps~aNFil~~~~~-----------~~~~~~~~~~L-~~~Gi~VR~~-----~~~lRIsvgt~ee-n~~~l~~ 361 (369)
T PRK02610 301 LPQLRVW-PSAANFLFLRLQG-----------AQDLAALHQAL-KNQGTLVRHT-----AGGLRITIGTPEE-NQRTLAR 361 (369)
T ss_pred CCCCEEC-CCCCEEEEEECCC-----------CCCHHHHHHHH-HCCCEEECCC-----CCEEEEEECCHHH-HHHHHHH
T ss_conf 7997789-9986089998899-----------75699999999-8299099989-----9908999499999-9999999
Q ss_pred HHHHHHHC
Q ss_conf 99999860
Q gi|254780602|r 392 IKRFCHSL 399 (400)
Q Consensus 392 l~~~l~~l 399 (400)
|+++|++|
T Consensus 362 Lk~~L~~~ 369 (369)
T PRK02610 362 LQAALTQL 369 (369)
T ss_pred HHHHHHHC
T ss_conf 99999619
No 80
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=404.75 Aligned_cols=335 Identities=20% Similarity=0.271 Sum_probs=281.0
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838---875699877898999999998642101333322332334543333222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMER---GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNA 107 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~---~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~ 107 (400)
...|.|+..|..|++||.+++++.+++.. +.+.||+..+ .+||++||+|++...|..+++|||++|+|+.++|.++
T Consensus 26 ~~~IkL~~NENP~gpsp~~~~ai~~a~~~~~~~~nrYPd~~~-~~Lr~alA~~l~~~~~~gv~~e~Ii~gnGSdE~i~~i 104 (369)
T PRK03317 26 DVPVRLNTNENPYPPSPALVDDIARAVREAAAGLNRYPDRDA-VALRTDLAAYLTAQTGVGLGVENVWAANGSNEILQQL 104 (369)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHH
T ss_conf 998660078899999999999999999976652472899748-9999999987503026797877878826899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-CCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22223322322223333232222222222222222222223222103331000122-12201211354210000123333
Q gi|254780602|r 108 LMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP-KTKWLFLNSPSNPSGVVYSQNRL 186 (400)
Q Consensus 108 ~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~k~i~l~nP~NPTG~v~s~~~l 186 (400)
++++++|||+|++++|+|..|...++..|++++.++.+ .+|.+|+|++.+++++ ++|+|+|||||||||++++.+++
T Consensus 105 ~~af~~pGd~vl~~~Ptf~~Y~~~a~~~g~~~v~v~~~--~df~~d~d~l~~ai~~~~~klv~l~nPNNPTG~~~~~~~l 182 (369)
T PRK03317 105 LQAFGGPGRSALGFVPSYSMHPIIARGTHTEWVAAPRA--ADFGLDVDAAVAAIREHRPDVVFLTSPNNPTGTALPLDDV 182 (369)
T ss_pred HHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCC--CCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCEECCHHHH
T ss_conf 99982899989974786027999998709779993678--7888399999998632698589975899987712378999
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 21112233333201110122110000012233222111233322574146544322344544422110122687531001
Q gi|254780602|r 187 RALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQG 266 (400)
Q Consensus 187 ~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~ 266 (400)
+++++.+ ++ ++ ||.||+|.+|..++. .+...+..+ ++|+|+++||||.||++|+|+||+++++++++.+.+++.
T Consensus 183 ~~i~~~~-~~-~~-vvvDEAY~ef~~~~~--~s~~~l~~~-~~nlivlRTfSK~~gLAGlRlGy~ia~~~~i~~l~~~~~ 256 (369)
T PRK03317 183 EALLDAA-PP-GI-VVVDEAYAEFSRQGT--PSALTLLPG-YPRLVVSRTMSKAFAFAGGRLGYLAAAPAVIDALRLVRL 256 (369)
T ss_pred HHHHHHC-CC-CE-EEECCCHHHHHCCCC--CCHHHHHHC-CCCEEEEECCHHHHCCCCHHHEEEECCHHHHHHHHHHCC
T ss_conf 9999858-87-77-994387798615688--766788613-797899941058644665331410069999999998448
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 22233222222222222346764322222211000000024553047760330274089986264102332113322489
Q gi|254780602|r 267 QQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRT 346 (400)
Q Consensus 267 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~ 346 (400)
.++++.++|.++..+|++ .+++.+.++.+.+.|+.+.+.|+++ |+++.++++.|+++-. ..+
T Consensus 257 --p~~vn~~a~~aa~aaL~d-~~~~~~~~~~i~~~R~~l~~~L~~l-g~~v~pS~aNFil~~~--------------~~~ 318 (369)
T PRK03317 257 --PYHLSAVTQAAARAALRH-ADETLASVAALRAERDRVVAWLREL-GFRVAPSDANFVLFGR--------------FAD 318 (369)
T ss_pred --CCCCCHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCEEEEEC--------------CCC
T ss_conf --988679999999999749-9999999999999999999999978-3978889887799963--------------799
Q ss_pred HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 899999999873979983502289972899962999999999999999998
Q gi|254780602|r 347 DLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 347 ~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
..++.+.|+ ++||+|.. ||.++|+||++++++| .+.-++.|++.|.
T Consensus 319 ~~~~~~~L~-~~gIlVR~---~g~~~~lRisigt~ee-n~~~l~al~~il~ 364 (369)
T PRK03317 319 AHAVWQRLL-DRGVLIRD---VGIPGWLRVTIGTPEE-NDAFLDALAEVLA 364 (369)
T ss_pred HHHHHHHHH-HCCCEECC---CCCCCCEEEECCCHHH-HHHHHHHHHHHHH
T ss_conf 999999999-68968922---8998937996199999-9999999999972
No 81
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=0 Score=398.27 Aligned_cols=355 Identities=18% Similarity=0.258 Sum_probs=285.8
Q ss_pred HHHHHHHHHCCCCHHHHHHHH-HHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 367889873897589999999-9999986997266565897498899999999999838875699877898999999998
Q gi|254780602|r 2 VFISNILRRVQPSATLVAAQR-VRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 2 ~~~s~~~~~l~~s~~~~~~~~-~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~ 80 (400)
|.+.+.++.++|+..-.-.+. .+++ ...++|+|+.+++.|++|+.+++++.+++.+ .+.||+. +..+||++||++
T Consensus 1 ~~~r~~i~~l~pY~~g~~~~~~~~~~--g~~~~ikLssNENP~g~s~~v~~al~~~~~~-~~~YPd~-~~~~Lr~~iA~~ 76 (366)
T PRK01533 1 MQVKDQLSSLQPYKPGKSPEQMKEVY--GDHSFVKLASNENPFGCSPRVLDELQKSWLD-HALYPDG-GATTLRQTIANK 76 (366)
T ss_pred CCCCHHHHCCCCCCCCCCHHHHHHHH--CCCCEEEEECCCCCCCCCHHHHHHHHHHHHH-CCCCCCC-CHHHHHHHHHHH
T ss_conf 98485750899999999989999861--8887699508999999999999999987874-5579697-789999999998
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 64210133332233233454333322222223322322223333232222222222222222222223222103331000
Q gi|254780602|r 81 FRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 81 ~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
+ ++++|||++|+|+.++|.+++++++++||+|+++.|+|+.|...+...|++++.+|++.. ..|++++.++
T Consensus 77 ~------gv~~e~I~vgnGs~E~i~~~~~a~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~l~~~---~~d~~~i~~~ 147 (366)
T PRK01533 77 L------HVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNG---VYDLDEISSV 147 (366)
T ss_pred H------CCCHHHEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCC---CCCHHHHHHH
T ss_conf 6------828212998178999999999999479982365898864579999980864899836778---6699999975
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|+++|||||||||++++.++++++++.|. + +.++|.||+|.+|+.++. .++...+.. .++|+|+++||||.
T Consensus 148 ~~~~~klv~l~nPNNPTG~~~~~~~l~~ll~~~~-~-~~~vviDEAY~ef~~~~~-~~~~~~l~~-~~~NliVlrTfSK~ 223 (366)
T PRK01533 148 VDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGIS-E-NTLIVIDEAYYEYVTAKD-FPETLPLLE-KHKNILVLRTFSKA 223 (366)
T ss_pred CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHCC-C-CEEEEECHHHHHHHCCCC-CCHHHHHHH-CCCCEEEEECCCHH
T ss_conf 0659878997799999767467065899986278-7-737861287897642578-710577876-18984899727432
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
||++|||+||+++++++++.+.+++. .+++++++|.++..+|. .++|+++.++...++++.+.+.++. .|+++.++
T Consensus 224 ~glaGlRiGy~ia~~~ii~~l~~~~~--p~~vn~la~~aa~aaL~-d~~~~~~~~~~~~e~~~~~~~~l~~-~g~~v~pS 299 (366)
T PRK01533 224 YGLASFRVGYAVGHEELIEKLNVVRL--PFNVSSLAQKAATIAFG-DDEFIEEIVRVNTEGLRQYESFCKE-NEIPFYQS 299 (366)
T ss_pred CCCCCHHHHHHHCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHH-CCCEECCC
T ss_conf 36830345366289999999998558--98843999999999967-9999999999999999999999987-86858999
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 7408998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
++.| +++++. ++.++.+.| .+.||+|.+. ++|+||+.++++ +-+.-++.|++++++-
T Consensus 300 ~aNF-ilv~~~--------------~~~~l~~~L-~~~GIlVR~~-----~~~iRIsvgt~e-eN~~ll~aLke~~e~~ 356 (366)
T PRK01533 300 QTNF-IFLPVE--------------NGGEIYEAC-AHAGFIIRPF-----PNGVRITVGTRE-QNEGVISVLQQHFENK 356 (366)
T ss_pred CCCE-EEEECC--------------CHHHHHHHH-HHCCEEEEEC-----CCCEEEECCCHH-HHHHHHHHHHHHHHHC
T ss_conf 7877-998669--------------999999999-9689899899-----598788279999-9999999999999855
No 82
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=396.77 Aligned_cols=323 Identities=17% Similarity=0.246 Sum_probs=252.1
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658974988999999999998388756998778989999999986421013333223323345433332222
Q gi|254780602|r 29 KGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNAL 108 (400)
Q Consensus 29 ~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~ 108 (400)
++.+||+||+|+|+++||+.+++++.+++++ .++|++..|..+||++||+++ | +++|+|++|+|++++|.++.
T Consensus 19 ~~pgiidlS~n~np~gpp~~v~~al~~a~~~-~~~YP~~~~~~~Lr~aiA~~~----g--v~~d~I~~gnGs~E~i~~l~ 91 (346)
T PRK07908 19 AAPGLLDFAVNVRADRPPEWLRERLAARLPD-LARYPSTEDVRRARAAVAARH----G--RTRDEVLLLAGAAEGFALLA 91 (346)
T ss_pred CCCCCEECCCCCCCCCCCHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHH----C--CCHHHEEEECCHHHHHHHHH
T ss_conf 8999778889999989799999999975554-668939865699999999997----8--58899987437999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 22233223222233332322222222222222222222232221033310001221220121135421000012333321
Q gi|254780602|r 109 MATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRA 188 (400)
Q Consensus 109 ~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~ 188 (400)
. +.+|+.|++ .|+|..|...++..|+.+..++++++ |.+|.++ +.+++|+|++||||||||++++++++.+
T Consensus 92 ~--~~~~~~vi~-~P~f~~y~~~~~~~g~~v~~v~l~~~--~~ld~~a----i~~~~~lv~l~nPnNPTG~~~~~e~l~~ 162 (346)
T PRK07908 92 R--LLPRRAAVV-HPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAA----VPDDADLVVVGNPTNPTSVLHPAEQLLA 162 (346)
T ss_pred H--HCCCCEEEE-CCCCHHHHHHHHHCCCCEEEEECCCC--CCCCHHH----CCCCCCEEEECCCCCCCCCCCCHHHHHH
T ss_conf 9--748996997-88857999999986992599507986--6689657----6767898997999798778678999999
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 11223333320111012211000001223322211123332257414654432234454442211012268753100122
Q gi|254780602|r 189 LADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQ 268 (400)
Q Consensus 189 i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~ 268 (400)
++ +. +.++|.||+|.+|+.+. ..++.. ...+++|+++||||+|++||||+||+++++++++++.+++...
T Consensus 163 l~----~~-~~~lVvDEaY~df~~~~--~~s~~~---~~~~nvivlrSfSK~yglaGlRiGy~va~~~~i~~l~~~~~~~ 232 (346)
T PRK07908 163 LR----RP-GRILVVDEAFADAVPGE--PESLAG---DALPDLLVLRSLTKTWSLAGLRVGYALGAPELLARLTAQRAHW 232 (346)
T ss_pred HH----CC-CCEEEEEHHHHHCCCCC--CHHHHH---HCCCCEEEEECHHHHHCCCHHHHEEEECCHHHHHHHHHHCCCC
T ss_conf 85----34-98999951154325897--134444---2489889992435762577255132116999999999827788
Q ss_pred CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 23322222222222234676--4322222211000000024553047760330274089986264102332113322489
Q gi|254780602|r 269 TSGACSIAQWAAVEALNGPQ--DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRT 346 (400)
Q Consensus 269 ~~~~~~~~q~a~~~~l~~~~--~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~ 346 (400)
+++++.+.++.+.+. .+ .+.....+.+.++|+.+.+.|+++ |+.+..|.+++|+|+++++
T Consensus 233 --~v~~~a~~a~~a~~~-~~~~~~~~~~~~~~~~~R~~l~~~L~~~-g~~~~~ps~anF~l~~~~~-------------- 294 (346)
T PRK07908 233 --PLGTLQLEAIAACCA-PRAVAEAAADAERLAALRAEMVAGLRAV-GAEVVDPGAAPFVLVRVPD-------------- 294 (346)
T ss_pred --CCCHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCEEEEEEECCC--------------
T ss_conf --887999999999958-7568999999999999999999999977-8865389950899986899--------------
Q ss_pred HHHHHHHHHHHCCEEEECCCCCC-C-CCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 89999999987397998350228-9-972899962999999999999999998
Q gi|254780602|r 347 DLDFVNGLLEIEKVAVVQGSSFG-H-GPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 347 ~~~~~~~Ll~~~gV~v~pG~~Fg-~-~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
.+++.++|.++||+|+||+.|+ . ++||||++++++ +.+.-++.|++.++
T Consensus 295 -a~~~~~~L~~~gIlVr~~~~f~gl~~~~iRiav~~~e-en~rli~aL~~il~ 345 (346)
T PRK07908 295 -AELVRKRLRERGIAVRRGDTFPGLDPDYLRAAVRPEW-PVDRLVQAIAEILR 345 (346)
T ss_pred -HHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHH-HHHHHHHHHHHHHC
T ss_conf -9999999980895999788778879898999838899-99999999999974
No 83
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=388.22 Aligned_cols=340 Identities=19% Similarity=0.288 Sum_probs=276.7
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 788987389758999999999999869972665658974988999999999998388-7569987789899999999864
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERG-ETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~-~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
+-+-++.++||.. ....++|.|+..|..+++||.+++++.+++.+. .+.||+.. ..+||++||+|+
T Consensus 10 ir~~i~~~~~Y~~-----------~~~~~~ikL~~NEnp~g~~~~v~~ai~~~~~~~~lnrYPd~~-~~~Lr~~lA~~~- 76 (356)
T PRK04870 10 IRPDVLAMSAYHV-----------PDAAGFVKLDAMENPYPLPAELQAELGERLAEVALNRYPDPR-AAALKAALRAAM- 76 (356)
T ss_pred HHHHHHCCCCCCC-----------CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHH-
T ss_conf 5488745899899-----------999998883278899998999999999975122437798998-999999999986-
Q ss_pred HHCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 2101333322-332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 83 RDNDLHYTSD-QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 83 ~~~g~~~~~e-~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
| ++++ ||++|||+.++|.++++++++|||+|+++.|+|..|...++..|++++.+|+++ +|.+|++++.+++
T Consensus 77 ---g--v~~~~~Ii~GnGSdElI~~i~~~~~~pgd~vl~~~Ptf~~Y~~~a~~~g~~~~~vpl~~--d~~~d~~~~~~~i 149 (356)
T PRK04870 77 ---G--VPAGADVLLGNGSDELIQLIALACAKPGAKVLAPVPGFVMYRMSAKFAGLEFVGVPLTA--DFTLDLPAMLAAI 149 (356)
T ss_pred ---C--CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCC--CCCCCHHHHHHHH
T ss_conf ---8--79877699816799999999999818989899767776689999998298799984687--6562128899874
Q ss_pred CC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 22-12201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 162 TP-KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 162 ~~-~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
++ ++|+|++||||||||+++++++++++++. . +.++|.||+|.+|.- ... ...... ++|+|+++||||
T Consensus 150 ~~~~~klv~i~nPNNPTG~~~~~~~l~~l~~~---~-~~lvVvDEAY~eF~~--~s~---~~~~~~-~~nlivlRTfSK- 218 (356)
T PRK04870 150 AEHRPALVYLAYPNNPTGNLFDDADVEAIIAA---A-PGLVVIDEAYQPFAG--RSW---LPRAAE-FPNVLVMRTVSK- 218 (356)
T ss_pred CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHC---C-CCEEEEECCCHHHCC--CCC---CHHHHC-CCCEEEEECCCC-
T ss_conf 14687389976899976633687889999850---6-986552254075567--862---101203-796899860541-
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
||++|+|+||+++++++++.+.+++. ..+++.++|.++..+|+ .++++++.++...+.|+.+.+.|++++|+++.++
T Consensus 219 ~glaGlRvGy~ia~~~~i~~l~k~~~--p~~vn~~a~~aa~~aL~-d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~pS 295 (356)
T PRK04870 219 LGLAGLRLGYLAGHPAWIAELDKVRP--PYNVNVLTQATALFALE-HVDVLDAQAAELRAERTRLAAALAALPGVTVFPS 295 (356)
T ss_pred CCCCCCCEEEEEECHHHHHHHHHHCC--CCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 01365662777509999999977348--98733999999999974-9588999999999999999999983699788899
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 7408998626410233211332248989999999987397998350228--9972899962999999999999999
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
++ .|+|++++ +..++.+.| .++||+|.+++.|+ .++|+||++++++|+ +.-++.|++
T Consensus 296 ~a-NFil~~~~--------------~a~~l~~~L-~~~gIlVR~~~~~~~~~~~~lRIsigt~een-~~ll~aLk~ 354 (356)
T PRK04870 296 AA-NFILVRVP--------------DAAAVFDGL-KTRRVLVKNVSGMHPLLANCLRVTVGSPEEN-AQFLAALKL 354 (356)
T ss_pred CC-EEEEEECC--------------CHHHHHHHH-HHCCEEEEECCCCCCCCCCEEEEECCCHHHH-HHHHHHHHH
T ss_conf 88-08999889--------------999999999-9699099988988888999899983999999-999999998
No 84
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=386.93 Aligned_cols=359 Identities=21% Similarity=0.257 Sum_probs=284.5
Q ss_pred HHHHHHHCCCCHHH-HHHHHHHHHHHCCC-CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 78898738975899-99999999998699-72665658974988999999999998388756998778989999999986
Q gi|254780602|r 4 ISNILRRVQPSATL-VAAQRVRDLRSKGI-DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF 81 (400)
Q Consensus 4 ~s~~~~~l~~s~~~-~~~~~~~~~~~~g~-~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~ 81 (400)
+..-++.|+|+.-. ...+.+++ -|. ++|.|+..|..++|+|.+++|+.+++.+ .+.||+.. ..+||++||+++
T Consensus 7 ~~p~i~~l~~y~p~~~~~~~~~~---~g~~~~ikL~sNENP~gpsp~v~~Ai~~~~~~-~~rYPd~~-~~~Lr~~lA~~~ 81 (370)
T PRK08153 7 LTPLVESLPSTVPFVGPETQERQ---RGRPFRARIGANESGFGPSPSVIAAMREAAAE-VWKYGDPE-NHDLRHALAAHH 81 (370)
T ss_pred CCHHHHHCCCCCCCCCHHHHHHH---CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCC-HHHHHHHHHHHH
T ss_conf 98558758898999988999986---49998778689999989899999999976864-56799977-899999999986
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 42101333322332334543333222222233223222233332322222222222222222222232221033310001
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
.+++|||+++||+.++|.++++++++|||+|+++.|+|+.|...+...|++++.+|+..+. .|++++.+++
T Consensus 82 ------gv~~e~I~~gnGSdeli~~~~~a~~~~g~~vv~~~p~y~~y~~~~~~~g~~~~~vp~~~~~---~d~~~~l~~~ 152 (370)
T PRK08153 82 ------GVAPENIMVGEGIDGLLGLIVRLYVEPGDAVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDH---EDLDALLDAA 152 (370)
T ss_pred ------CCCHHHEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCC---CCHHHHHHHC
T ss_conf ------8786679980888999999999985599923437887516999999819669999445654---4869999860
Q ss_pred -CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf -2212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 162 -TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 162 -~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
++++|+|+|||||||||++++.++++++++.+ .+ +.++|.||+|.+|..++ ++..+... ++|+|+++||||.
T Consensus 153 ~~~~~klv~l~nPNNPTG~~~~~~~l~~l~~~~-~~-~~lvVvDEAY~ef~~~~----~~~~l~~~-~~NliVlRTfSK~ 225 (370)
T PRK08153 153 RRENAPLVYLANPDNPMGSWHPAADIVAFIEAL-PE-TTLLVLDEAYCETAPAS----AAPPIDPD-DPNVIRMRTFSKA 225 (370)
T ss_pred CCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEEHHHHHHCCCC----CHHHHHHC-CCCEEEEEECCHH
T ss_conf 378973899768959857767868899999847-77-73896215356435642----17788743-9988999826220
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 22344544422110122687531001222332222222222223467643222222110000000245530477603302
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
||++|+|+||+++++++++.+.+++. .++++.+.|.++.++|+ +++|+++.++...+.|+.+.+.|+.. |+++.++
T Consensus 226 ygLAGlRlGY~ia~~~li~~l~k~r~--p~~vn~~aq~aa~aaL~-d~~~~~~~~~~i~~~R~~l~~~l~~~-g~~~~pS 301 (370)
T PRK08153 226 YGLAGARVGYAIGTPGTIKAFDKVRN--HFGMNRIAQAAALAALK-DQAYLAEVVAKIAAARDRIAAIARAN-GLTPLPS 301 (370)
T ss_pred CCCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCC
T ss_conf 37888743201389999999998648--98877999999999977-99999999999999999999999868-5847999
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998609
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
++.| +++++... .....++.++|+ ++||+|.....++.++|+|||+++++| .+.-++.|++.|+.-|
T Consensus 302 ~aNF-il~~~~~~----------~~~a~~l~~~L~-~~GIlVR~~~~~~l~~~lRIsiGt~ee-n~~~l~aL~eiLk~~~ 368 (370)
T PRK08153 302 ATNF-VAIDCGRD----------GAFARAVLDGLI-ARDIFVRMPGVAPLDRCIRVSVGPEEE-LDLFAEALPEALKAAR 368 (370)
T ss_pred CCCE-EEEECCCC----------HHHHHHHHHHHH-HCCEEECCCCCCCCCCEEEEECCCHHH-HHHHHHHHHHHHHHHH
T ss_conf 7877-99984897----------469999999999-789199449988899989997399999-9999999999999863
No 85
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=0 Score=388.41 Aligned_cols=345 Identities=20% Similarity=0.303 Sum_probs=277.0
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999986997266565897498899999999999838875699877898999999998642101333322332334
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
+.+.++++--.-.+||+|+..+..|++|+.+++++.+++.. ...||+.. ..+||++||+++ .+++|||++++
T Consensus 8 i~~~~~~~G~~~~~iidlssNeNP~g~p~~v~~ai~~~~~~-~~rYPd~~-~~~Lr~~iA~~~------gv~~~~I~vgn 79 (356)
T PRK08056 8 IREAATVLGISPDQLLDFSANINPLGMPVSVKRALIDNLDC-IERYPDAD-YFHLHQALARHH------QVPASWILAGN 79 (356)
T ss_pred HHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHHHHHHHHHH-HHCCCCCC-HHHHHHHHHHHH------CCCHHHEEECC
T ss_conf 99999994959766777379999989999999999974757-74199824-899999999982------98889988758
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 54333322222223322322223333232222222222222222222223222103331000122122012113542100
Q gi|254780602|r 99 GAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSG 178 (400)
Q Consensus 99 G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG 178 (400)
|+++.|++++..+ .++ .+++..|+|..|...++..|++++.+++.++++|.++ +.+.+++++++|+|++||||||||
T Consensus 80 Gs~Eli~~i~~~~-~~~-~~~i~~Ptf~~Y~~~a~~~g~~v~~~~l~~~~~~~~~-~~~~~~~~~~~~lv~i~nPNNPTG 156 (356)
T PRK08056 80 GETESIFTVASGL-KPR-RAMIVTPGFAEYGRALAQVGCEIRRWSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTG 156 (356)
T ss_pred CHHHHHHHHHHHC-CCC-CEEEECCCHHHHHHHHHHCCCEEEEEECCHHHCCCCC-HHHHHHCCCCCCEEEECCCCCCCC
T ss_conf 7899999999854-899-6699788749999999985976999867733158976-999973367888899818999988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH-HHH
Q ss_conf 0012333321112233333201110122110000012233222111233322574146544322344544422110-122
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA-LSL 257 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~-~~l 257 (400)
.++++++++++++.| +.+++++|.||+|.+|+.++.. +..+..+ ++|+++++||||.|+++|+|+||++++ +..
T Consensus 157 ~~~~~~~l~~l~~~~-~~~~~~vvvDEAY~ef~~~~~s---~~~~~~~-~~nlivlrTfSK~~glaGlRiGy~i~~~~~~ 231 (356)
T PRK08056 157 LLPERQLLQAIADRC-KSLNINLILDEAFIDFIPHETG---FIPALKD-NPHIWVLRSLTKFYAIPGLRLGYLVNSDDAA 231 (356)
T ss_pred CCCCHHHHHHHHHHH-HCCCEEEEEEHHHHHHCCCCCC---HHHHHHC-CCCEEEEEECCHHCCCCCCCHHHHHCCCHHH
T ss_conf 758999999999872-4049399974455764358613---5799845-9978998414164068520001110588999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCC
Q ss_conf 68753100122233222222222222346764322222211000000024553047760330274089986264102332
Q gi|254780602|r 258 IKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKK 337 (400)
Q Consensus 258 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~ 337 (400)
++.+.+.+. ..+++++.|.++..+|+ +++|+++.++..++.|+.+.+.|++++|+++.+++ +.|+|+++.
T Consensus 232 i~~l~~~~~--p~~vn~~a~~aa~~al~-d~~~~~~~~~~i~~~r~~l~~~L~~l~g~~v~ps~-aNFil~~~~------ 301 (356)
T PRK08056 232 VARMRRQQM--PWSINALAALAGEVALQ-DSAWQQATWHWLREEGARFYQALCQLPLLTVYPGR-ANYLLLRCE------ 301 (356)
T ss_pred HHHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC-CCEEEEECC------
T ss_conf 999996158--99811999999999836-99999999999999999999998658997889898-878999889------
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CC-CCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 1133224898999999998739799835022-89-9728999629999999999999999986
Q gi|254780602|r 338 SPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF-GH-GPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F-g~-~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
.++.++.+.|+ ++||+|.+++.| |. ++|+||++++++|+ +.-++.|++.|..
T Consensus 302 -------~~~~~~~~~L~-~~gIlVR~~~~f~gl~~~~lRisigt~~en-~~ll~aL~~iL~g 355 (356)
T PRK08056 302 -------REDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRSAAQN-ERLLAALRNVLTG 355 (356)
T ss_pred -------CCHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEECCCHHHH-HHHHHHHHHHHCC
T ss_conf -------99999999999-689099767888999999899975999999-9999999999737
No 86
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=384.97 Aligned_cols=349 Identities=19% Similarity=0.255 Sum_probs=258.6
Q ss_pred EECCCCC---CCCCCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCCCCCCCC
Q ss_conf 6656589---7498899999999999838-87569987789899999999864210133332233---233454333322
Q gi|254780602|r 34 LCLTAGE---PDFDMPENVKYAVVRAMER-GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQI---IVGTGAKHVIFN 106 (400)
Q Consensus 34 i~l~~G~---p~~~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I---~it~G~~~~l~~ 106 (400)
||+++|- -+-+..-.++++..+.+.. ....|.|..|+|++|+++++.+... +..+.++.+ ++|+|+++||.+
T Consensus 6 iN~tiG~~~d~~~~~~l~~v~~~~~~l~~~~~~~Y~Pi~G~p~~~~~~~~~~~~~-~~~~~~~~~~~~v~T~Ggt~al~~ 84 (386)
T PRK08637 6 YNATIGMATEKGGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRD-NPSLSGKNMSLPIVTNALTHGLSL 84 (386)
T ss_pred EEEEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCC-CCHHHHCCEEEEEECCCHHHHHHH
T ss_conf 5503899987999882899999997368410258689767299999999998367-921111264666875746899999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCC---C-CCCCEEECCCCCCCCCCC
Q ss_conf 2222233223222233332322222222-2222222222222322210333100012---2-122012113542100001
Q gi|254780602|r 107 ALMATVNMGDEVLIPRPYWVSYPDMVAL-CGGIPVFVDTQQDDNFQVSPEKLEQAIT---P-KTKWLFLNSPSNPSGVVY 181 (400)
Q Consensus 107 ~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~-~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~-~~k~i~l~nP~NPTG~v~ 181 (400)
++..+++|||+|++++|+|++|..++.. .|.++..+|+..+++ .+|++.+.+.+. + +..++++++||||||.++
T Consensus 85 ~~~~~~~~gd~Vlip~P~W~ny~~i~~~~~G~~v~~y~~~~~~~-~~~~~~~~~~l~~~~~~~~vvll~n~phNPTG~~~ 163 (386)
T PRK08637 85 VADLFVNQGDTVLLPDHNWGNYKLVFNTRNGANLQTYPIFDKDG-HFTTDALVEALQAAYNKDKVILILNFPNNPTGYTP 163 (386)
T ss_pred HHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCC-CCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCC
T ss_conf 99998479998999179854179999983798416774264678-97819999999845778838999878999888689
Q ss_pred CCCCCCCCCCCCCCC----CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE--EEEECCCCCCCCCCCCCCCCCCC--
Q ss_conf 233332111223333----3201110122110000012233222111233322--57414654432234454442211--
Q gi|254780602|r 182 SQNRLRALADVLVRN----PHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYER--TLVVNGVSKAYAMTGLRIGYAAG-- 253 (400)
Q Consensus 182 s~~~l~~i~~~~a~~----~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~--~i~~~S~SK~~~~~G~RiG~~v~-- 253 (400)
+.+++++|++++.++ .++++|+|++|.+|.|++....++....+++.++ +++++|+||+|+|+|||+||++.
T Consensus 164 t~ee~~~i~~~~~~~~~~g~~i~~i~D~aY~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~myG~RvG~l~~~~ 243 (386)
T PRK08637 164 THKEVTTIVEAIKALADKGTKVIAVVDDAYYGLFYEDVYKESLFTALANLHSNILAVKLDGATKEFFAWGFRVGFITFGT 243 (386)
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEC
T ss_conf 99999999999998773388889999601456630884322499986215776489996131012557002315788605
Q ss_pred -HHHHHHHH----HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCHHHHHHC---CCCCEEEECCC
Q ss_conf -01226875----310012223322222222222234676432222---22110000000245530---47760330274
Q gi|254780602|r 254 -ALSLIKSM----IVLQGQQTSGACSIAQWAAVEALNGPQDFVVNN---RKIFEYRRDLCVAQLQG---VPGIRYMIPDG 322 (400)
Q Consensus 254 -~~~li~~l----~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~---~~~~~~~r~~~~~~L~~---~~g~~~~~p~g 322 (400)
+++..+.+ ......+.+++|++.|.++..+|+.++.+.++. ++.+++|++.+.+.|.+ -.++.+.+.++
T Consensus 244 ~~~~~~~~~~~~~~~~~r~~~Snpp~~gq~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~l~~~~~~~~~~~~p~~~ 323 (386)
T PRK08637 244 SDQTTKEVLEAKVKGLIRSNISSGPHPSQSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEVVYDDQYDDHWQAYPFNS 323 (386)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 98999999999999998604488568999999999759088999999999999999999999974204356863245676
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 08998626410233211332248989999999987397998350228997289996-2999999999999999998609
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-AVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~~~~e~l~~al~rl~~~l~~l~ 400 (400)
|||.|+++++ .++++++.+|+++++|.++| +| .+++|||| +.++++++++++||++++++||
T Consensus 324 G~F~~i~~~~------------~~~e~l~~~Lle~~~V~~v~---~g-~~~iRIs~aals~~nI~~~~~~I~~al~~Lk 386 (386)
T PRK08637 324 GYFMCLKLKD------------VDAEELRVHLLEKYGIGVIA---LN-ETDLRIAFSCVEEEDIPHVFDSIAKAIDDLR 386 (386)
T ss_pred EEEEEECCCC------------CCHHHHHHHHHHCCCEEEEE---CC-CCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
T ss_conf 1588647998------------99999999998639589995---59-9977999985889999999999999998539
No 87
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=0 Score=384.09 Aligned_cols=326 Identities=16% Similarity=0.220 Sum_probs=264.9
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
+.+|.|+..|..++|+|.+++|+.+++.. .+.||+.. ..+||++||+++ .+++|||+++||+.+.|.+++++
T Consensus 46 ~g~ikL~sNENP~Gpsp~v~~Ai~~~~~~-~~rYPd~~-~~~Lr~~lA~~~------gv~~~~I~~gnGSdE~i~~l~~a 117 (374)
T PRK09105 46 EGAVFLNFNENPLGPSAAARAAAARSAAL-SGRYLFEM-QDELRTLFAAQL------GLPVDHLHAYAGSSEPLNYAVLA 117 (374)
T ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHH-CCCCCCCC-HHHHHHHHHHHH------CCCHHHEEEECCHHHHHHHHHHH
T ss_conf 99978458888889899999999976524-57798986-899999999997------85902499936999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 23322322223333232222222222222222222223222103331000122122012113542100001233332111
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALA 190 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~ 190 (400)
+++|||+|++++|+|..|...++..|++++.+|++++ |.+|++.+.+. .+++|+++|||||||||++++.+++++++
T Consensus 118 f~~~g~~vv~~~Ptf~~Y~~~a~~~g~~v~~vpl~~d--~~~dl~~l~~~-~~~tklv~l~nPNNPTG~~~~~~el~~~~ 194 (374)
T PRK09105 118 FTSPEAGLVTADPTYEAGWRAADAQGAKVIKVPLRAD--GAHDVRAMLAA-DPNAGLIYICNPNNPTGSVTPRADIEWLL 194 (374)
T ss_pred HHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEEECCC--CCCCHHHHHHC-CCCCCEEEECCCCCCCCCCCCHHHHHHHH
T ss_conf 8079986895888779999999982977999861655--58586889735-78987899788999987657999999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 22333332011101221100000122332221112333225741465443223445444221101226875310012223
Q gi|254780602|r 191 DVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 191 ~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
+. ..+ +.+||.||+|.+|. +. ++...+... ++|+|+++||||.|+++|+|+||+++++++++.+.++.. .
T Consensus 195 ~~-~~~-~~lvvvDEAY~ef~--~~--~s~~~l~~~-~~NvivlRTfSKaygLAGlRvGY~ia~~~li~~l~~~~~---~ 264 (374)
T PRK09105 195 AH-KPA-GSVVLVDEAYIHFS--DA--PSVVDLVAQ-RKDVVVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFGG---N 264 (374)
T ss_pred HH-CCC-CCEEEEEHHHHHHC--CC--CCCHHHHHC-CCCEEEEEHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCC---C
T ss_conf 71-898-81899862676625--78--643256742-898899822237626651002231089999999973588---9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 32222222222223467643222222110000000245530477603302740899862641023321133224898999
Q gi|254780602|r 271 GACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDF 350 (400)
Q Consensus 271 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (400)
..+...|.+++++|+ +++|+++.++...+.|+.+.+.|++. |+++.++++.|++ +++. .+..++
T Consensus 265 ~~~~~a~aaa~aaL~-d~~~~~~~~~~~~~~R~~l~~~L~~~-g~~~~pS~aNFil-~~~~-------------~~a~~~ 328 (374)
T PRK09105 265 PLPVPAAAAGLASLR-DPKLVPQRRAQNAAVREDTIAWLRKQ-GYACTPSQANCFM-VDVK-------------RPAEVF 328 (374)
T ss_pred CCCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCEEE-EECC-------------CCHHHH
T ss_conf 887999999999962-99999999999999999999999978-3958998785799-9559-------------999999
Q ss_pred HHHHHHHCCEEEECCCCCC-CCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 9999987397998350228-9972899962999999999999999998
Q gi|254780602|r 351 VNGLLEIEKVAVVQGSSFG-HGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 351 ~~~Ll~~~gV~v~pG~~Fg-~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
.+.| .++||.|. ..|+ .++|+||++++++| .+.-++.|++.++
T Consensus 329 ~~~L-~~~gIlV~--r~~~~~~~~lRISiGt~ee-n~~fl~AL~evL~ 372 (374)
T PRK09105 329 ADAM-AKQGVFIG--RSWPIWPNWVRVTVGTEEE-MAAFRSAFAKVMR 372 (374)
T ss_pred HHHH-HHCCEEEE--CCCCCCCCEEEEECCCHHH-HHHHHHHHHHHHC
T ss_conf 9999-96997993--7999889979994699999-9999999999866
No 88
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=383.18 Aligned_cols=332 Identities=20% Similarity=0.324 Sum_probs=271.2
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 889873897589999999999998699726656589749889999999999983887-5699877898999999998642
Q gi|254780602|r 5 SNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 5 s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
-+.++.++|+.. .+|..+|.|+.+++.|+||+.+++++.+++++.. +.||+ .+..+||++||+|+
T Consensus 3 r~~i~~~~pY~~-----------~~~~~~I~L~~NEnp~gpp~~v~~ai~~~l~~~~~~rYPd-~~~~~Lr~~ia~~~-- 68 (337)
T PRK03967 3 REEVKEFKPYRV-----------YEGDYRIWLDKNENPFDLPEELKEEIFEELKRVPFNRYPH-ITADPLREAIAEFL-- 68 (337)
T ss_pred CHHHHCCCCCCC-----------CCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCC-CCHHHHHHHHHHHH--
T ss_conf 836635899778-----------8999817826989999999999999999987158776999-98799999999986--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 10133332233233454333322222223322322223333232222222222222222222223222103331000122
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
.+++++|++|+|+.++|..+++++ +||+|+++.|+|+.|...++..|++++.+|+++ +|.+|++.+.+. .+
T Consensus 69 ----gv~~~~v~~gnGs~e~i~~~~~~~--~gd~v~i~~P~f~~Y~~~~~~~g~~~~~vpl~~--~f~~d~~~~~~~-~~ 139 (337)
T PRK03967 69 ----GLDAENIIVGNGSDELISYLVKLF--NGKYIVISPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGDRIVEK-AK 139 (337)
T ss_pred ----CCCHHEEEECCCHHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHCCCEEEEEECCC--CCCCCHHHHHHC-CC
T ss_conf ----838410998278899999999863--999799868983089999998398599961534--567899999851-77
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++++|++||||||||++++.+++.++++ . +..||.||+|.+|. +... ..+... ++++|+++||||.|++
T Consensus 140 ~~~~v~l~nPnNPTG~~~~~~el~~~~~----~-~~~vvvDEaY~ef~--~~s~---~~l~~~-~~nliv~rSfSK~~gl 208 (337)
T PRK03967 140 DASAVFICSPNNPTGNLQPIEEILKVLD----T-GKPVVVDEAYVEFS--GKSY---IGLLDE-YDNLILLRTFSKAFGL 208 (337)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHH----C-CCEEEECCCHHHHC--CCCH---HHHHHH-CCCCEEEECCCHHHCC
T ss_conf 8878999389998762167899998650----0-88788435547645--7525---778874-7762166556655345
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 44544422110122687531001222332222222222223467643222222110000000245530477603302740
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
+|||+||+++++++++.+.+++. .++++.++|.++..+|+ .++++++.++.+.+.|+.+.+.|.++ ++ |..+
T Consensus 209 aGlRlGy~ia~~~~i~~l~k~~~--p~~vn~~a~~aa~aal~-~~~~~~~~~~~~~~~r~~l~~~L~~~-~~----ps~a 280 (337)
T PRK03967 209 AGIRVGYAIANEEIIKALYRIKP--PFSLNILSEKIVRLMLD-HYDLIKERIDYIIKERERVYRELGDY-AY----PSDA 280 (337)
T ss_pred CCCCCEEECCCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCC-CC----CCCC
T ss_conf 62002310189999999999538--98775999999999962-99999999999999999999981277-78----9988
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8998626410233211332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
.|+|++. ++.+.| .++||+|.....+ .++|+|||++++ ++.+..++.|++|++..
T Consensus 281 NFvl~~~------------------~~~~~L-~~~gIlVR~~~~~-~~~~iRIsvgt~-een~~ll~aLke~~e~~ 335 (337)
T PRK03967 281 NFLLLKL------------------DAYDYL-LENGIVVRKLSGR-LEGHIRVTIGKK-EENDEFIKALKEFKENY 335 (337)
T ss_pred EEEEEEH------------------HHHHHH-HHCCEEEECCCCC-CCCEEEEECCCH-HHHHHHHHHHHHHHHHH
T ss_conf 1999725------------------899999-8499099489999-999899983999-99999999999999972
No 89
>KOG0256 consensus
Probab=100.00 E-value=0 Score=374.75 Aligned_cols=328 Identities=23% Similarity=0.430 Sum_probs=285.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 5699877898999999998642101--33332233233454333322222223322322223333232222222-22222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDND--LHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA-LCGGI 138 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g--~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~-~~g~~ 138 (400)
..|.+..|++++|+|+|+++.+..| +.++|+++++++|++.+...+..++++|||.-++|+|+|+.+..-++ ..|.+
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~r~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCE
T ss_conf 63345347568999999999998489874376566885575316677787625898510356899876322014203836
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCC------CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 2222222223222103331000122------1220121135421000012333321112233333201110122110000
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITP------KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVY 212 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~------~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~ 212 (400)
+++|.+..+++|+++.+++|++.++ ++|+++++||+||.|++++++++..+++++.+ +++.+|+||+|+.-+|
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~-kniHvI~DEIya~sVF 273 (471)
T KOG0256 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASR-KNIHVISDEIYAGSVF 273 (471)
T ss_pred EEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH-CCEEEEEEHHHHHCCC
T ss_conf 999984067884122999999999999818952489982799977774699999999998864-5627986032100203
Q ss_pred CCCCCCCCCCCCCC---CCCEEEEECCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 01223322211123---332257414654432234454442211-0122687531001222332222222222223467-
Q gi|254780602|r 213 RNCQFSNIVNVEPS---LYERTLVVNGVSKAYAMTGLRIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP- 287 (400)
Q Consensus 213 ~~~~~~s~~~~~~~---~~~~~i~~~S~SK~~~~~G~RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~- 287 (400)
+...+.|++++... ..+++.+++|+||.||+||+|+|.+.+ +++++.+..++.+ ...+++..|+.++..|.+.
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYs~ne~VvsaA~kmss--f~~vSs~tQ~~la~LLSD~~ 351 (471)
T KOG0256 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSS--FGLVSSQTQYLLASLLSDEE 351 (471)
T ss_pred CCCCCEEHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHHHH--CCCCCHHHHHHHHHHHCHHH
T ss_conf 6667137898752645687727999973355698863789998667389999998750--36875899999999843088
Q ss_pred --CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECC
Q ss_conf --643222222110000000245530477603302740899862641023321133224898999999998739799835
Q gi|254780602|r 288 --QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQG 365 (400)
Q Consensus 288 --~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG 365 (400)
+.|+.+.+.+++.+.+++.++|+++ |+.+.+.+||+|+|+|++.+..... .....++.++++++.+|.+.||
T Consensus 352 f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl~s~AGlF~wvDlr~lL~s~t-----fe~El~Lw~~i~~~vklnlSpG 425 (471)
T KOG0256 352 FTREYLRENNKRLRIRHRYIVEGLKAL-GIPCLKSNAGLFCWVDLRKLLTSLT-----FEGELELWERILDNVKLNLSPG 425 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCEEEEEEHHHHCCCCC-----HHHHHHHHHHHHHHHCCCCCCC
T ss_conf 999999999999999999997548764-8840306870699976677457578-----1889999999998606325799
Q ss_pred CCCC--CCCEEEEEEE-CCHHHHHHHHHHHHHHHHH
Q ss_conf 0228--9972899962-9999999999999999986
Q gi|254780602|r 366 SSFG--HGPSIRISYA-VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 366 ~~Fg--~~~~iRis~~-~~~e~l~~al~rl~~~l~~ 398 (400)
+.|- .+||+|++|+ ..++.++.|++||+.++++
T Consensus 426 ~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256 426 SSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 762436898589984248877899999999999874
No 90
>PRK03262 consensus
Probab=100.00 E-value=0 Score=366.70 Aligned_cols=341 Identities=17% Similarity=0.239 Sum_probs=266.6
Q ss_pred HHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 88987389758999999999999869972665658974988999999999998388756998778989999999986421
Q gi|254780602|r 5 SNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 5 s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
-+.++.++||..- ++ -.++.+|.|+..|..+++|+.+.+. ..+.||+.. ..+||++||+++
T Consensus 10 r~~i~~l~pY~~~------~~--~~~~~~ikL~sNEnP~~~~~~~~~~-------~lnrYPD~~-~~~Lr~aiA~~~--- 70 (355)
T PRK03262 10 RENVRNLTPYQSA------RR--LGGNGDVWLNANEYPTAVEFQLTQQ-------TLNRYPECQ-PKAVIENYAQYA--- 70 (355)
T ss_pred CHHHCCCCCCCCC------CC--CCCCCCEEEECCCCCCCCCHHHHHH-------HHCCCCCCC-HHHHHHHHHHHH---
T ss_conf 8652678998873------44--7999988957899999984877678-------870398998-899999999986---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 0133332233233454333322222223322-322223333232222222222222222222223222103331000122
Q gi|254780602|r 85 NDLHYTSDQIIVGTGAKHVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP 163 (400)
Q Consensus 85 ~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~ 163 (400)
+++++||+++||+.++|.++++++++|| |.|+++.|+|..|...++..|++++.+|+.+ +|.+|++.+.+++.
T Consensus 71 ---gv~~~~I~vGnGSdE~I~~i~~~f~~pg~d~vl~~~PtF~~Y~~~a~~~g~~~~~vp~~~--~~~~dl~~~~~~~~- 144 (355)
T PRK03262 71 ---GVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYAVSAETIGVEIRTVPTLE--NWQLDLQAIADNLD- 144 (355)
T ss_pred ---CCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCC--CCCCCHHHHHHHCC-
T ss_conf ---858557999378999999999998638997799778885999999997398389964655--66768999996404-
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++|++++||||||||+.++.++++++++.+ +. +.++|.||+|.+|+-+ . +...+... ++|+|+++||||.||+
T Consensus 145 ~~klv~l~nPNNPTG~~~~~~el~~l~~~~-~~-~~lvVvDEAY~eF~~~-~---s~~~l~~~-~~NliVlRTfSK~~gL 217 (355)
T PRK03262 145 GVKVVYVCSPNNPTGNLINPQDLRTLLELT-RG-KAIVVADEAYIEFCPQ-A---SLAGWLAE-YPNLVILRTLSKAFAL 217 (355)
T ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEECHHHHHCCC-C---CHHHHHHC-CCCEEEEECHHHHHCC
T ss_conf 888899768999876446999999999768-76-7289873025543656-2---15567640-7744676126777246
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEECC
Q ss_conf 44544422110122687531001222332222222222223467-64322222211000000024553047760-33027
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMIPD 321 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~p~ 321 (400)
+|+|+||+++++++++.+.+++. ..+++.+.|.++..+|... .+++++..+..++.|+.+.+.|+++++++ +.+++
T Consensus 218 AGlRlGy~ia~~~ii~~l~k~~~--p~~vn~~~~~~a~~al~~~~~~~~~~~i~~i~~~R~~l~~~L~~l~~~~~v~pS~ 295 (355)
T PRK03262 218 AGLRCGFTLANEEVINLLLKVIA--PYPLSTPVADIAAQALSPQGIEAMRERVAQINANRAWLIAALKEIACVEQVFDSE 295 (355)
T ss_pred CCCCEEEEECCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
T ss_conf 65350543179999999998438--9987799999999997226599999999999999999999998489986068997
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 40899862641023321133224898999999998739799835022-89972899962999999999999999998609
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF-GHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F-g~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
+ -|+++++. ++.++.+.|+ ++||+|.+...| |.++|+||++++++|+ +++-+.|+++|
T Consensus 296 a-NFvl~~~~--------------~~~~~~~~L~-~~gIlVR~~~~~~gl~~~lRisigt~een-----~~~l~aLka~~ 354 (355)
T PRK03262 296 T-NYILARFT--------------ASSAVFKSLW-DQGIILRDQNKQPSLSNCLRITIGTREEC-----QRVIDALRAEQ 354 (355)
T ss_pred C-CEEEEECC--------------CHHHHHHHHH-HCCCEEEECCCCCCCCCEEEEECCCHHHH-----HHHHHHHCCCC
T ss_conf 8-28999789--------------9999999999-69938966888789999899966999999-----99999971387
No 91
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=365.98 Aligned_cols=344 Identities=21% Similarity=0.281 Sum_probs=264.6
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+-+.++.++||..- +. ......|.|+..|..+++|+....+ ...||+.. ..+||++||+++
T Consensus 10 ~R~~i~~l~~Y~~~------~~--~~~~~~ikL~~NEnp~~~p~~~~~~--------~~RYPD~~-~~~Lr~~lA~~~-- 70 (362)
T PRK04781 10 VREDLRAFAGYSSA------RT--SALQGDVWLNANESAWGNPADPDAS--------TRRYPDPQ-PKGLRSALAALY-- 70 (362)
T ss_pred HHHHHHCCCCCCCC------CC--CCCCCCEEEECCCCCCCCCHHHHHH--------HCCCCCCC-HHHHHHHHHHHH--
T ss_conf 46886169998998------77--7899998977989999984444277--------54798998-899999999986--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHH-CC
Q ss_conf 10133332233233454333322222223322-3222233332322222222222222222222-232221033310-00
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQ-DDNFQVSPEKLE-QA 160 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~-~~~~~~d~~~l~-~~ 160 (400)
.+++|+|++|||+.++|.+++++++.|| |.|+++.|+|..|...++..|++++.+|+.+ +.+|..|++++. ..
T Consensus 71 ----gv~~~~I~~GnGSdE~I~ll~~a~~~pg~d~vl~~~PtF~~Y~~~a~~~g~~~~~vpl~~~~~~f~~d~~~~~~~~ 146 (362)
T PRK04781 71 ----GCAPEQLLIGRGSDEAIDLLVRGLCVPERDAVLVTPPVFGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAAA 146 (362)
T ss_pred ----CCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf ----8695579983678999999999995589854884797468999999983987999957555124677999999885
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
+++++|+++|||||||||++++.++++++++.| +. +.+||.||+|.+|. + ..+...+... ++|+|+++||||.
T Consensus 147 ~~~~~klv~l~nPNNPTG~~~~~~~l~~~~~~~-~~-~~lvvvDEAY~eF~--~--~~s~~~l~~~-~~NliVlRTfSK~ 219 (362)
T PRK04781 147 LASNAKLVFLCSPSNPAGSAIALDQIETALQAL-QG-KALVVVDEAYGEFS--D--VPSAVGLLAR-YDNLAVLRTLSKA 219 (362)
T ss_pred HCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEECHHHHHC--C--CCCHHHHHHC-CCCEEEEECHHHH
T ss_conf 267988899868989735567989999999757-99-80899834165525--7--8434457651-7854533140587
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 223445444221101226875310012223322222222222234676-4322222211000000024553047760330
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ-DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
||++|+|+||+++++++++.+.+++. ..+++++.|.++.++|.... ++..+.....+..|+.+.+.|++++|+...-
T Consensus 220 ygLAGlRlGy~ia~~~~i~~l~k~~~--p~~v~~~a~~~a~~al~~~~~~~~~~~v~~i~~eR~~l~~~L~~l~g~~~v~ 297 (362)
T PRK04781 220 HALAAARIGSLIANAELIAVLRRCQA--PYPVPTPCAAMAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRQVY 297 (362)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
T ss_conf 40755350444179999999998217--9887599999999996076699999999999999999999998478985568
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CCCCEEEEEEECCHH--HHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022-899728999629999--99999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF-GHGPSIRISYAVSDA--ILEEACVRIKR 394 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F-g~~~~iRis~~~~~e--~l~~al~rl~~ 394 (400)
|..+.|+++++. +..++.+.|+ ++||+|.++..| |.++|+||++++++| .+-++++++.+
T Consensus 298 pS~aNFil~~~~--------------~a~~~~~~L~-~~gIlVR~~~~~p~l~~~lRisigt~een~~ll~aL~~i~e 360 (362)
T PRK04781 298 PSQGNFLLVRFD--------------DAEAAFQALL-AAGVVVRDQRAVPRLSDALRITIGTPEQNDRVLAALQRTQE 360 (362)
T ss_pred CCCCEEEEEECC--------------CHHHHHHHHH-HCCCEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 998849998779--------------9999999999-49939970788789999799980999999999999999996
No 92
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=0 Score=363.34 Aligned_cols=331 Identities=24% Similarity=0.348 Sum_probs=277.7
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
.++++|+.++..+++|+.+++++.++++ ..+.||+. ...+||+++++++.. +++++|++++|+.+.|..++++
T Consensus 22 ~~~i~LssNenP~gp~~~~~~~~~~~~~-~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~~l~~~ 94 (356)
T COG0079 22 PGIIKLSSNENPYGPPPKVIEAIRAALD-KLNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELIELLVRA 94 (356)
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHH-HHHCCCCC-CHHHHHHHHHHHHCC-----CCCCEEEEECCHHHHHHHHHHH
T ss_conf 6554624788999998999999998788-86429996-179999999998479-----9802399827848999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 23322322223333232222222222222222222223222103331000122122012113542100001233332111
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALA 190 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~ 190 (400)
++.|||+|+++.|+|..|...++..|++++.+++.+ |..|++.+.+.+.++++++|+||||||||+.++.+++++++
T Consensus 95 ~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~ 171 (356)
T COG0079 95 FVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALL 171 (356)
T ss_pred HHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCC---CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 617898599817880788999997698699944644---44588999865146888899959959988876999999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 22333332011101221100000122332221112333225741465443223445444221101226875310012223
Q gi|254780602|r 191 DVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 191 ~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
+.+ .. +.+||.||+|.+|.- .+...+.. .++|++++.||||.|+++|+|+||+++++++++.+.+.+. .+
T Consensus 172 ~~~-~~-~~~vVvDEAY~eF~~-----~~~~~l~~-~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~--p~ 241 (356)
T COG0079 172 EAL-PE-GGLVVIDEAYIEFSP-----ESSLELLK-YPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRP--PF 241 (356)
T ss_pred HHC-CC-CCEEEEECCCCCCCC-----CHHHHHHC-CCCCEEEEECCHHHHCCCHHCEEEHCCCHHHHHHHHHHCC--CC
T ss_conf 838-78-858999775310278-----24545521-4898899954678640211333402089999999998307--88
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEECCCCEEEEEECCCCCCCCCCCCCCCCCHHH
Q ss_conf 3222222222222346764322222211000000024553047760-330274089986264102332113322489899
Q gi|254780602|r 271 GACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLD 349 (400)
Q Consensus 271 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~ 349 (400)
+++.+.|.++.++|+. ++|+++.++...+.|+.+.+.|+.++ +. +.+++ +-|+++++++ .. ..+
T Consensus 242 ~v~~~a~~aa~aal~~-~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~-aNFvlv~~~~-----------~~-~~~ 306 (356)
T COG0079 242 NVSSPALAAAIAALRD-ADYLEESVERIREERERLYAALKALG-LFGVFPSQ-ANFVLVRVPD-----------AE-AAA 306 (356)
T ss_pred CCCHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCC-CCEEEEECCC-----------CC-HHH
T ss_conf 8889999999986024-89999999999999999999997379-87015588-8779997586-----------21-999
Q ss_pred HHHHHHHHCCEEEECCCCC-CCCCEEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 9999998739799835022-899728999629999999999999999986
Q gi|254780602|r 350 FVNGLLEIEKVAVVQGSSF-GHGPSIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 350 ~~~~Ll~~~gV~v~pG~~F-g~~~~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
+.+.|+ ++||.+++...- ..++|+||+.++++|+ +.-++.|+++++.
T Consensus 307 l~~~L~-~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 307 LAEALL-KKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred HHHHHH-HCCEEEEECCCCCCCCCEEEEECCCHHHH-HHHHHHHHHHHHC
T ss_conf 999998-78989985777788887599965988999-9999999998731
No 93
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=362.61 Aligned_cols=331 Identities=18% Similarity=0.258 Sum_probs=261.3
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+-+.++.++||..- ++ -.+..+|.|+..|..++++..+.+ + ..+.||+.. ..+||+++|+++
T Consensus 9 ~r~~i~~l~pY~~~------~~--~~~~~~ikL~sNEnP~~p~~~~~~---~----~lnrYPD~~-~~~Lr~alA~~~-- 70 (355)
T PRK01688 9 ARENVRALTPYQSA------RR--LGGNGDVWLNANEYPTAVEFQLTQ---Q----TLNRYPECQ-PKAVIENYAQYA-- 70 (355)
T ss_pred HCHHHCCCCCCCCC------CC--CCCCCCEEEECCCCCCCCCHHHHH---H----HHCCCCCCC-HHHHHHHHHHHH--
T ss_conf 57552478998873------55--899996895789998998776767---8----862497998-899999999986--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 10133332233233454333322222223322-32222333323222222222222222222222322210333100012
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
++++|+|+++||+.++|.++++++++|| |.|++..|+|..|...++.+|++++.+|+++ +|.+|++++.+.++
T Consensus 71 ----gv~~e~I~vGnGSdElI~~l~raf~~pg~d~vl~~~PtF~~Y~~~a~~~g~~~~~vpl~~--~f~~d~~~~~~~~~ 144 (355)
T PRK01688 71 ----GVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLE--NWQLDLPAISDNLD 144 (355)
T ss_pred ----CCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCC--CCCCCHHHHHHHCC
T ss_conf ----858778998168999999999998558997499778876899999986795799952765--76869999997515
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
++|++++||||||||+.++.++++++++.+ +. +.+||.||+|.+|+-+ .+...+... ++|+|++.||||.||
T Consensus 145 -~~klvficNPNNPTG~~~~~~~l~~l~~~~-~~-~~lvVvDEAY~eF~~~----~s~~~l~~~-~~NliVlRTfSK~~g 216 (355)
T PRK01688 145 -GVKVVYVCSPNNPTGNLINPQDLRTLLELT-RG-KAIVVADEAYIEFCPQ----ASLAGWLAE-YPHLVILRTLSKAFA 216 (355)
T ss_pred -CCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEECHHHHCCCC----HHHHHHHHC-CCEEEEEEEHHHHHC
T ss_conf -888899868999877646899999999758-88-8668855416434764----004567640-772899951668752
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCC-EEEEC
Q ss_conf 344544422110122687531001222332222222222223467-6432222221100000002455304776-03302
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGI-RYMIP 320 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~-~~~~p 320 (400)
++|+|+||+++++++++.+.+++. ..+++.+.|.++.++|.+. .+++.+..+...+.|+.+.+.|++++++ ++.++
T Consensus 217 LAGlRlGy~ia~~~ii~~l~k~~~--p~~vn~~~~~~a~~al~~~~~~~~~~~~~~i~~~R~~l~~~L~~l~~~~~v~pS 294 (355)
T PRK01688 217 LAGLRCGFTLANEEVINLLLKVIA--PYPLSTPVADIAAQALSPQGIAAMRERVAQINANRQWLIAALKEIPCVEQVFDS 294 (355)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
T ss_conf 687312788509999999998507--897539999999999720459999999999999999999999858998616899
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC-CCCCCEEEEEEECCHHH
Q ss_conf 74089986264102332113322489899999999873979983502-28997289996299999
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSS-FGHGPSIRISYAVSDAI 384 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~-Fg~~~~iRis~~~~~e~ 384 (400)
++. |+++++. ++.++.+.|+ ++||+|++.+. +|.++|+||++++++|+
T Consensus 295 ~aN-Fil~~~~--------------~~~~~~~~L~-~~GIlVR~~~~~~gl~~~lRItigt~een 343 (355)
T PRK01688 295 ETN-YILARFT--------------ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGTREEC 343 (355)
T ss_pred CCC-EEEEECC--------------CHHHHHHHHH-HCCEEEEECCCCCCCCCEEEEECCCHHHH
T ss_conf 887-8999779--------------9999999999-79909955898789999899976999999
No 94
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=0 Score=362.96 Aligned_cols=339 Identities=19% Similarity=0.250 Sum_probs=266.1
Q ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 78898738975899999999999986997266565897498899999999999838875699877898999999998642
Q gi|254780602|r 4 ISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 4 ~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+.+.+++|+||.. . + +..+.++|.|+..|..+++++.+..+ ..+.||+.. ..+||+++|+++
T Consensus 5 ~r~~i~~l~pY~~----~--~--~~~~~~~ikL~sNEnP~~~~~~~~~~-------~lnRYPD~~-~~~L~~~lA~~~-- 66 (346)
T PRK04635 5 ARKQVQALTPYLS----A--R--RIGGSGDVWLNANESPFDNEYKTNFA-------RLNRYSECQ-PKELIQAYAAYA-- 66 (346)
T ss_pred HHHHHCCCCCCCC----C--C--CCCCCCCEEEECCCCCCCCCHHHHHH-------HHCCCCCCC-HHHHHHHHHHHH--
T ss_conf 1233247899899----7--7--78998948937999999985656599-------836799988-899999999996--
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 10133332233233454333322222223322-32222333323222222222222222222222322210333100012
Q gi|254780602|r 84 DNDLHYTSDQIIVGTGAKHVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 84 ~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
++++|||++|+|+.++|.++++++++|| |.|+++.|+|..|...++..|++++.+|++++ |..|++.+++.+
T Consensus 67 ----~v~~~~Ii~gnGSde~I~~i~~af~~pg~d~vl~~~PtF~~Y~~~a~~~g~~~~~vpl~~d--~~~dl~~l~~~~- 139 (346)
T PRK04635 67 ----GVKPEQVLTSRGADEGIELLIRAFCEPNQDAILYCPPTYGMYAISAETIGVERKTVPLTSD--WQLDLPSIEANL- 139 (346)
T ss_pred ----CCCHHHEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCC--CCCCHHHHHHHC-
T ss_conf ----8696689984889999999999984699976997787569999999747967999736856--577999998643-
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
+++|++++||||||||++++.++++++++.+ ++ +.+||.||+|.+|.-+ .+...+... ++|+|+++||||.||
T Consensus 140 ~~~kli~l~NPNNPTG~~~~~~~l~~l~~~~-~~-~~lvVvDEAY~ef~~~----~s~~~l~~~-~~NliVlRTfSK~~g 212 (346)
T PRK04635 140 DNVKLVFVCSPNNPTGNLVKRKDIISLLEMT-KD-RAIVVMDEAYIDFCPE----ASTVDLLAQ-YPNLAILRTLSKAFA 212 (346)
T ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHC-CC-CCEEEEECCEECCCCC----CCHHHHHHH-CCCEEEEECHHHHHC
T ss_conf 4875899778999876448999999999848-75-6559987453103656----446789860-881687505678740
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 344544422110122687531001222332222222222223467643222--222110000000245530477603302
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVN--NRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~--~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
++|+|+||+++++++++.+.+++. ..+++.+.|.++..+|.+. ++... ......+.|+.+...|..++|+++.++
T Consensus 213 LaGlRlGY~ia~~~~i~~l~k~~~--p~~v~~~a~~~a~~al~~~-~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~~s 289 (346)
T PRK04635 213 LAGLRCGFTLANEELINVLLKVIA--PYPVPVPVAEIATQALSEA-GLARAKFQVLDLSANRAYLQAGLSMLPGVTVFEG 289 (346)
T ss_pred CCCCCCEEECCCHHHHHHHHHHHC--CCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCC
T ss_conf 654111410079999999998408--9888899999999997307-8999999999999999999999986799077899
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
++.| ++++++ +..++.+.|+ ++||.|..+ +.++|+|||.++ +++.++.++.|++|.|
T Consensus 290 ~aNF-il~~~~--------------~~~~~~~~l~-~~GI~VR~~---~~~~~iRISvGt-~eEn~~~l~~lr~~~~ 346 (346)
T PRK04635 290 WGNY-LLVKFP--------------DGDALFKAAW-DHGIILRNS---PIENCVRISVGN-REECEKTLGFIRNYYQ 346 (346)
T ss_pred CCCE-EEEECC--------------CHHHHHHHHH-HCCEEECCC---CCCCEEEEECCC-HHHHHHHHHHHHHHHC
T ss_conf 8808-999889--------------9999999998-399598569---999979995399-9999999999999859
No 95
>KOG0258 consensus
Probab=100.00 E-value=0 Score=336.52 Aligned_cols=389 Identities=22% Similarity=0.337 Sum_probs=295.0
Q ss_pred HHHHHHHCCCCHHH-HHHHHHHHHHHCCC--------CEEECCCCCCC--------C--------------C---CCHHH
Q ss_conf 78898738975899-99999999998699--------72665658974--------9--------------8---89999
Q gi|254780602|r 4 ISNILRRVQPSATL-VAAQRVRDLRSKGI--------DVLCLTAGEPD--------F--------------D---MPENV 49 (400)
Q Consensus 4 ~s~~~~~l~~s~~~-~~~~~~~~~~~~g~--------~ii~l~~G~p~--------~--------------~---~p~~i 49 (400)
+|+++.+.+ +..+ .+.-+|.|++.+.+ +||+-++|+|. | . -|..+
T Consensus 13 ~N~~V~k~e-YAVRG~i~~rA~El~~eL~~~~~~PF~eiI~aNIGnpqamgQ~PiTF~RQvlal~~~p~lLd~~~fp~Da 91 (475)
T KOG0258 13 LNPNVKKAE-YAVRGPIVIRADELEKELKKGVKKPFDEIIRANIGNPQAMGQKPITFLRQVLALCQYPELLDSPEFPTDA 91 (475)
T ss_pred CCHHHHHHH-HHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHCCHHHCCCCCCCHHH
T ss_conf 472555333-3212415566899999997377688178784147997881788647999999995474330788897689
Q ss_pred HHHHHHHHHC--CC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 9999999838--87-569987789899999999864210133332233233454333322222223-3223222233332
Q gi|254780602|r 50 KYAVVRAMER--GE-TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV-NMGDEVLIPRPYW 125 (400)
Q Consensus 50 ~~a~~~al~~--~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~-~~Gd~Vlv~~P~y 125 (400)
++.....+++ |. ..|.+++|.+-+|+.+|+|..+|.|...+|++|.+|.|++.|+..++..++ .+.|.|++|-|.|
T Consensus 92 i~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQY 171 (475)
T KOG0258 92 IKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQY 171 (475)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 99999999756876455302457736899999998852689898777553278858999999999658987037526877
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-----CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 32222222222222222222223222103331000122-----1220121135421000012333321112233333201
Q gi|254780602|r 126 VSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP-----KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVH 200 (400)
Q Consensus 126 ~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-----~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ 200 (400)
|.|...+...|+..+++-++++++|.+|.++|++.+.+ ++|++++.||.||||.++|++.+++|+++|++ .++.
T Consensus 172 PLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~-~~l~ 250 (475)
T KOG0258 172 PLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAE-EGLV 250 (475)
T ss_pred CHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHCHHHHHHHHHHHHH-CCCE
T ss_conf 404888997288335435433447778899999999998616884189997799961145068779999999987-3707
Q ss_pred EECCCCCCCCCCCCC-CCCCCCCCCCCC----CCE--EEEECCCCCCC-CCCCCCCCCCCC---HHHHHHHHHHHCCCCC
Q ss_conf 110122110000012-233222111233----322--57414654432-234454442211---0122687531001222
Q gi|254780602|r 201 IISDDIYEHIVYRNC-QFSNIVNVEPSL----YER--TLVVNGVSKAY-AMTGLRIGYAAG---ALSLIKSMIVLQGQQT 269 (400)
Q Consensus 201 ii~De~Y~~l~~~~~-~~~s~~~~~~~~----~~~--~i~~~S~SK~~-~~~G~RiG~~v~---~~~li~~l~~~~~~~~ 269 (400)
++.||+|.+-+|.+. +|.|+....-++ .++ ++.++|.||.+ +-.|.|-||+-. +++.-.++.++.+ ..
T Consensus 251 llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~s-i~ 329 (475)
T KOG0258 251 LLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLAS-IK 329 (475)
T ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHH-HH
T ss_conf 73268887632578760274999999846867785577661035522112305567732110588278777898875-64
Q ss_pred CCCCCCCCCCCCCCCCCC----CC---CC---CCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCC
Q ss_conf 332222222222223467----64---32---222221100000002455304776033027408998626410233211
Q gi|254780602|r 270 SGACSIAQWAAVEALNGP----QD---FV---VNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSP 339 (400)
Q Consensus 270 ~~~~~~~q~a~~~~l~~~----~~---~~---~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~ 339 (400)
.|++...|...-.....+ .+ +. ......+++|.+.+.+.+++++|++|.+|+|+||+|+.+.-.......
T Consensus 330 lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~ 409 (475)
T KOG0258 330 LCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEA 409 (475)
T ss_pred HCCCCCCHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCCCCCCHHHHHH
T ss_conf 16675322533201589999984266666666768999987628899987505764632676223534534678889999
Q ss_pred C-CCCCCCHHHHHHHHHHHCCEEEECCCCCCCC-C--EEEEEEECCHHHHHHHHHHHHHHHHH
Q ss_conf 3-3224898999999998739799835022899-7--28999629999999999999999986
Q gi|254780602|r 340 S-GDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG-P--SIRISYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 340 ~-~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-~--~iRis~~~~~e~l~~al~rl~~~l~~ 398 (400)
. ......|+-+|.+||++.||+++||++||.. | |+|.+|..+. + +-++|+++|-+.
T Consensus 410 A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~ 469 (475)
T KOG0258 410 AKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAE 469 (475)
T ss_pred HHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCH--H-HHHHHHHHHHHH
T ss_conf 99708997089999999765758834887788985048888625706--5-999999999999
No 96
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=0 Score=336.71 Aligned_cols=304 Identities=21% Similarity=0.306 Sum_probs=228.4
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
.++|+|+..+..+ +|+.+.+++.++++. ...||.. .+||+++|+++ | ++|++++|++++|.++..+
T Consensus 8 ~~iidfssN~NP~-~P~~~~~~~~~~~~~-~~~YP~~---~~L~~~la~~~----g-----~~i~~~~Gs~e~i~~l~~~ 73 (312)
T PRK08354 8 EGLIDFSASVNPY-PPEWLDEMFERAVEI-SGRYTYY---EWLEEEFSKLF----G-----EPITITAGITEALYLIGIL 73 (312)
T ss_pred HHCEEECCCCCCC-CCHHHHHHHHHHHHH-HCCCCCH---HHHHHHHHHHH----C-----CCEEECCCHHHHHHHHHHH
T ss_conf 6416607999999-972999999960564-0049998---99999998876----8-----7969926799999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 23322322223333232222222222222222222223222103331000122122012113542100001233332111
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALA 190 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~ 190 (400)
++ +||+|+++.|+|..|...++..|++++.+++ |++.+++.+ ++++++++||||||||++++.+++++++
T Consensus 74 ~~-~~~~vl~~~Ptf~~Y~~~a~~~g~~v~~~~~--------d~~~l~~~~-~~~~~v~l~nPNNPTG~~~~~~~l~~l~ 143 (312)
T PRK08354 74 AL-RDRKVIIPRHTYGEYERVARFFAARIIKGPN--------DPEKLEELV-EKNSVVFFCNPNNPDGKYYNFKELAPLI 143 (312)
T ss_pred HC-CCCEEEEECCCHHHHHHHHHHCCCEEEECCC--------CHHHHHHHH-CCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 76-9898999359999999999986987873599--------989998630-4898899968989867868989999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 22333332011101221100000122332221112333225741465443223445444221101226875310012223
Q gi|254780602|r 191 DVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 191 ~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
+.|. .++++||.||+|.+|+.+... ++ ++|+|+++||||.|++||+|+||+++++++++++. ...
T Consensus 144 ~~~~-~~~~~vvvDEAY~ef~~~~~~--------~~-~~nlivlrS~SK~~glaGlRlGy~i~~~e~i~~~r-----~p~ 208 (312)
T PRK08354 144 DAVE-DKNVLLILDEAFIDFVKKAES--------PE-GENIIKLRTFTKSYGVPGIRVGYVKGFEEAFRSVR-----MPW 208 (312)
T ss_pred HHCC-CCCCEEEEECHHHHHCCCCCC--------CC-CCCEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHC-----CCC
T ss_conf 8647-778489974047773676334--------77-79889997462643574043436627899999863-----898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 32222222222223467643222222110000000245530477603302740899862641023321133224898999
Q gi|254780602|r 271 GACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDF 350 (400)
Q Consensus 271 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (400)
+++++.|.++..++.+..+++++.++.+.+.|+.+ .+....++++.| ++++++ +..++
T Consensus 209 ~vn~~a~~~~~~~l~d~~~~~~~~~~~~~~er~~l-------~~~~~~~s~aNF-il~~~~--------------~a~~~ 266 (312)
T PRK08354 209 GIGSLGYAFLEFLLEDNFEHLKKTLPLIWREKERF-------EKFLYVKSDANF-FIKDVG--------------DAEKF 266 (312)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HCCCCCCCCCCE-EEEECC--------------CHHHH
T ss_conf 87499999999998816999999999999999999-------562368996738-998779--------------99999
Q ss_pred HHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 99999873979983502289972899962999999999999999998
Q gi|254780602|r 351 VNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 351 ~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
++.| .++||+|.+++.||.++|+||++++++| -+.-++.|++|..
T Consensus 267 ~~~L-~~~gIlVR~~~~fgl~~~iRisvg~~ee-n~~li~aLke~~~ 311 (312)
T PRK08354 267 VEFL-KRNGILVRDCTSFGLPGYVRFSVRDREE-NEKLLNALREWRL 311 (312)
T ss_pred HHHH-HHCCEEEEECCCCCCCCEEEEECCCHHH-HHHHHHHHHHHHC
T ss_conf 9999-8399199968999999989997199999-9999999998851
No 97
>KOG0634 consensus
Probab=100.00 E-value=0 Score=333.66 Aligned_cols=361 Identities=23% Similarity=0.319 Sum_probs=279.7
Q ss_pred HCCCCEEECCCCCCC---CCCCH--------HHHHHH----------HHHHHC------CCCCCCCCCCCHHHHHHHHHH
Q ss_conf 869972665658974---98899--------999999----------999838------875699877898999999998
Q gi|254780602|r 28 SKGIDVLCLTAGEPD---FDMPE--------NVKYAV----------VRAMER------GETKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 28 ~~g~~ii~l~~G~p~---~~~p~--------~i~~a~----------~~al~~------~~~~Y~~~~G~~~lR~aia~~ 80 (400)
+.+.++|.|+.|-|+ ||.-. ++.|.. .....+ ..+||+++.|.|+|+..|.++
T Consensus 33 ~~~i~~i~lagGlPnp~~fp~~~~s~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h 112 (472)
T KOG0634 33 ASPISIISLAGGLPNPDYFPIRSDSIKPQGSWKKENGKKLNNVTFAFENEASENTLPLSRALQYGQSSGIPELLLFIKDH 112 (472)
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHH
T ss_conf 38976387158999998656545544635675113665112124540136874533156663145446848999999874
Q ss_pred HH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 64-21013333223323345433332222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 81 FR-RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 81 ~~-~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
.. ..+.-.+..=+|++|+|.+++++.++..+||+||.|++..++|+.-.+..+..|+++++|++++++ +++|.|++
T Consensus 113 ~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv~md~~G---i~pE~l~~ 189 (472)
T KOG0634 113 NRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPVKMDQDG---IDPESLEE 189 (472)
T ss_pred CCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCEEEECCCCCCC---CCHHHHHH
T ss_conf 623142777788438980687217899999851678826874034367887331048457741456789---88799998
Q ss_pred CCC---------CCCCCEE-ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC--------CC-----
Q ss_conf 012---------2122012-113542100001233332111223333320111012211000001--------22-----
Q gi|254780602|r 160 AIT---------PKTKWLF-LNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRN--------CQ----- 216 (400)
Q Consensus 160 ~i~---------~~~k~i~-l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~--------~~----- 216 (400)
.+. ++++++| +.+-+||||..++.+++++|.++ ||+||++||+||+|..|-|+. .+
T Consensus 190 il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~L-ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~ 268 (472)
T KOG0634 190 ILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQL-ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSS 268 (472)
T ss_pred HHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH-HHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCHH
T ss_conf 9864885434689970799676888998874689999999999-987678999247631243366688766467552478
Q ss_pred ------CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf ------33222111233322574146544322344544422110122687531001222332222222222223467---
Q gi|254780602|r 217 ------FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--- 287 (400)
Q Consensus 217 ------~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--- 287 (400)
.+++.+++. ..|||...||||.++ ||+|+||+.+++.+++++.......+.+++.++|.+.-+.|...
T Consensus 269 ~f~k~l~~sflslDt--dGrVIr~dSFSKiia-PGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqe 345 (472)
T KOG0634 269 MFLKSLVPSFLSLDT--DGRVIRNDSFSKIIA-PGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQE 345 (472)
T ss_pred HHHHHHCCCCCCCCC--CCCEEECCCHHHHHC-CCCEEEEEECCHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 898864477323666--661786341244416-76315786357778888861203100386641099999999998888
Q ss_pred --CCCCCCCCCCCCCCCCCHHHHHHC-CCC--CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE
Q ss_conf --643222222110000000245530-477--603302740899862641023321133224898999999998739799
Q gi|254780602|r 288 --QDFVVNNRKIFEYRRDLCVAQLQG-VPG--IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAV 362 (400)
Q Consensus 288 --~~~~~~~~~~~~~~r~~~~~~L~~-~~g--~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v 362 (400)
.+|+.+.+..|..||+.+..+|.+ +|+ .++++|.||||+|++++ ... ....+....-+++...++.+.||.+
T Consensus 346 G~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~-~~~--~~~~~~i~q~~e~i~~~~vk~gV~~ 422 (472)
T KOG0634 346 GFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIP-YIN--FDTKKSINQIEEIIFIKAVKNGVKL 422 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEEC-CCC--CCCCCCHHHHHHHHHHHHHHCCEEE
T ss_conf 8999999999999888999999999758777069866876469999926-643--4655666799999999999779189
Q ss_pred ECCCCCCC------CC-EEEEEEE-CCHHHHHHHHHHHHHHHHH
Q ss_conf 83502289------97-2899962-9999999999999999986
Q gi|254780602|r 363 VQGSSFGH------GP-SIRISYA-VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 363 ~pG~~Fg~------~~-~iRis~~-~~~e~l~~al~rl~~~l~~ 398 (400)
++|+.|-. .. ++|++|+ .+.|++++|++|+...|++
T Consensus 423 v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634 423 VCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ECCCEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 33743687676577752599996208988999999999999998
No 98
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=0 Score=332.25 Aligned_cols=314 Identities=18% Similarity=0.236 Sum_probs=237.6
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
.++||||.+-..|... .....||+.. ..+||++||+|+ .+++++|+++||+++.|..++.
T Consensus 16 g~ilDfSsniNP~~~~------------~~l~rYPd~~-~~~Lr~~iA~~~------~v~~~~I~vgnGs~ElI~~l~~- 75 (332)
T PRK06425 16 GRIIDFSANINDFMDI------------GDISIYPEIS-YTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLS- 75 (332)
T ss_pred CCCEEECCCCCCCCCC------------CHHHHCCCCC-HHHHHHHHHHHH------CCCHHHEEECCCHHHHHHHHHH-
T ss_conf 9988878877999983------------1564294998-699999999886------9686739982209999999999-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 23322322223333232222222222222222222223222103331000122122012113542100001233332111
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALA 190 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~ 190 (400)
.+.+| .++++.|+|..|...++..|++++.+|....+ .+++.++ +.+++++++||||||||++++++++++++
T Consensus 76 ~~~~~-~~~i~~PtF~~Y~~~a~~~g~~~~~vp~~~~~---~~~~~~~---~~~~~lv~i~nPNNPTG~~~~~~~l~~l~ 148 (332)
T PRK06425 76 YINVG-NIIIVEPNFNEYKGYAFTHGIRISALPFNLIN---NNPEILN---NYNFDLIFIVSPDNPLGNLISRDSLLTIS 148 (332)
T ss_pred HHCCC-CEEEECCCHHHHHHHHHHCCCEEEEECCCCCC---CCHHHHH---CCCCCEEEEECCCCCCCCCCCHHHHHHHH
T ss_conf 86899-98996888899999999869989995743332---5888884---58989899941817201348999999999
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 22333332011101221100000122332221112333225741465443223445444221101226875310012223
Q gi|254780602|r 191 DVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 191 ~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
+.|. +++.+||.||+|.+|+-+. ..+...+. ..++|+|+++||||.|++||+|+||+++++++++.+.+.+. .+
T Consensus 149 ~~~~-~~~~~vvvDEAY~ef~~~~--~~~~~~l~-~~~~NliVlRSfSK~~gLaGlRlGY~i~~~~~i~~l~~~~~--p~ 222 (332)
T PRK06425 149 EICR-KKGALLFIDEAFIDFVPNR--AEEDVLLN-RSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITE--PW 222 (332)
T ss_pred HHCC-CCCCEEEEECHHHHHHCCC--CHHHHHHH-HCCCCEEEEEEHHHHHHCCCHHHEHHCCCHHHHHHHHHCCC--CC
T ss_conf 9605-2697999964135651466--34357776-40798899920078761641433331089999999997048--98
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHH
Q ss_conf 32222222222223467643222222110000000245530477603302740899862641023321133224898999
Q gi|254780602|r 271 GACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDF 350 (400)
Q Consensus 271 ~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (400)
+++.+.+.+ +.+++ .+.+.+..++..++.|+++.+.|+++ |+.+..+..++|+|++++ +..++
T Consensus 223 ~v~~~a~~~-~~a~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~aNFil~~~~--------------~a~~l 285 (332)
T PRK06425 223 SVCDPAIDF-IRSID-LDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP--------------DAHDF 285 (332)
T ss_pred CCHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCCEEEEEECC--------------CHHHH
T ss_conf 738999999-99963-19999999999999999999999977-797889997048999679--------------99999
Q ss_pred HHHHHHHCCEEEECCCCCCC--CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 99999873979983502289--97289996299999999999999999
Q gi|254780602|r 351 VNGLLEIEKVAVVQGSSFGH--GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 351 ~~~Ll~~~gV~v~pG~~Fg~--~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.++|+ ++||+|++++.|+. ++|+||+.++++| -+.-++.|+++|
T Consensus 286 ~~~L~-~~gIlVR~~~~~~~l~~~~iRisvgt~~e-N~~ll~aLk~~L 331 (332)
T PRK06425 286 YSYLL-KNGILVRLLDDYECLGEQYIRIAIRRRSF-NIKLVNALRNFL 331 (332)
T ss_pred HHHHH-HCCEEEEECCCCCCCCCCEEEEECCCHHH-HHHHHHHHHHHH
T ss_conf 99999-69919998899898899999997899999-999999999975
No 99
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=0 Score=304.07 Aligned_cols=302 Identities=17% Similarity=0.228 Sum_probs=231.5
Q ss_pred CCEEECCCCCCCCCCC-HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9726656589749889-999999999983887569987789899999999864210133332233233454333322222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMP-ENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALM 109 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p-~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~ 109 (400)
.|||+||.+...+++| +.+.. +++ ..|++.. ..||+++++++ |. ++|++++|++++|.++..
T Consensus 20 ~~iiDfSsNiNP~g~P~~~~~~---~~~----~ryP~~~--~~L~~a~a~~~----g~----~~vl~gnGs~e~I~ll~~ 82 (330)
T PRK05664 20 ADWLDLSTGIAPWPWPVPPIPA---DAW----ARLPETD--DGLEAAARAYY----GA----PQLLPVAGSQAAIQALPR 82 (330)
T ss_pred HHEEECCCCCCCCCCCHHHHHH---HHH----HHCCCCC--HHHHHHHHHHC----CC----CCEEEECCHHHHHHHHHH
T ss_conf 9915537888999998688889---999----8779996--89999999871----99----739994169999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 22332232222333323222222222222222222222322210333100012212201211354210000123333211
Q gi|254780602|r 110 ATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRAL 189 (400)
Q Consensus 110 ~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i 189 (400)
. .++++|+++.|+|..|...++..|.+++.++ .+++...+ ++.+++++||||||||.++++++++++
T Consensus 83 l--~~~~~v~i~~PtfseY~~a~~~~g~~v~~~~----------~~~~~~~~-~~~d~v~l~nPNNPTG~~~~~~~l~~~ 149 (330)
T PRK05664 83 L--RAPGRVGVLSPCYAEHAHAWRRAGHQVRELD----------EAEVEAAL-DSLDVLVVVNPNNPTGRRFDPARLLAW 149 (330)
T ss_pred H--HCCCEEEECCCCHHHHHHHHHHCCCEEEECC----------HHHHHHCC-CCCCEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 7--4899468848887999999998699889768----------77776226-788989982792886689899999999
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 12233333201110122110000012233222111233322574146544322344544422110122687531001222
Q gi|254780602|r 190 ADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT 269 (400)
Q Consensus 190 ~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~ 269 (400)
++.|.+ .+.++|.||+|.++.-+ .++.... . .+++++++||||.|++||+|+||+++++++++.+.+++. .
T Consensus 150 ~~~~~~-~~~~lvvDEay~d~~~~----~s~~~~~-~-~~nlivlrS~sK~~glaGlRlGy~~a~~~~i~~l~~~~~--p 220 (330)
T PRK05664 150 HARLAA-RGGWLVVDEAFMDNTPQ----HSLAACA-H-RPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLG--P 220 (330)
T ss_pred HHHHHH-CCCEEEEECHHHCCCCC----HHHHHHC-C-CCCEEEEEECCHHHCCCCCCCEEHCCCHHHHHHHHHHCC--C
T ss_conf 998653-19889997532116873----1146633-5-899899840447426854030201089999999998449--9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHH
Q ss_conf 33222222222222346764322222211000000024553047760330274089986264102332113322489899
Q gi|254780602|r 270 SGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLD 349 (400)
Q Consensus 270 ~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~ 349 (400)
.+++++.|.++..+|. +++|+.+.++...+.|+.+.+.|+.. |+++..+. +.|+++... +..+
T Consensus 221 w~Vn~~a~~aa~aaL~-d~~~~~~~~~~l~~er~~l~~~L~~~-g~~~~~s~-anF~l~~~~--------------~a~~ 283 (330)
T PRK05664 221 WTVSGPTRWLAQAALA-DTPWQRQQRERLLAASQRLAALLRRH-GLPPAGGC-ALFQWVRTE--------------DAAA 283 (330)
T ss_pred CCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCC-CEEEEEECC--------------CHHH
T ss_conf 9860999999999963-99999999999999999999999978-88427995-369996259--------------9999
Q ss_pred HHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHH---HHHHHHHH
Q ss_conf 99999987397998350228997289996299999---99999999
Q gi|254780602|r 350 FVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAI---LEEACVRI 392 (400)
Q Consensus 350 ~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~---l~~al~rl 392 (400)
+.+.|+ ++||+|.. |+..+++|+++..++++ |.+|+..+
T Consensus 284 l~~~L~-~~GIlVR~---~~~~~~LRi~i~~~e~~~~rL~~AL~~~ 325 (330)
T PRK05664 284 LHEFLA-RRGILTRL---FEQPPSLRFGLPADEADWARLDQALLAY 325 (330)
T ss_pred HHHHHH-HCCEEEEE---CCCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 999999-69949978---8999977985798878899999999999
No 100
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4.2e-45 Score=294.51 Aligned_cols=323 Identities=16% Similarity=0.173 Sum_probs=235.4
Q ss_pred HHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 99999999986997266565897498899999999999838875699877898999999998642101333322332334
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
+.+.+++.--.-.++|+||.+...+++|.....+ +++ ..|++. + ..|+++++.+| |. .++++|+.++
T Consensus 12 l~~~a~~~G~~~~~ilDlSsNiNPlG~P~~~~~a--~~~----~ryPd~-~-~~l~~~~a~~~----g~-~~~~~Vl~gn 78 (339)
T PRK06959 12 LHEAARRYGIPYDAWLDLSTGINPHGYPVPPVPA--DAW----RRLPDD-G-DGLAACAARYY----GA-PDAAHVLPVA 78 (339)
T ss_pred HHHHHHHHCCCHHHEEECCCCCCCCCCCCCHHHH--HHH----HHCCCC-C-HHHHHHHHHHC----CC-CCHHHEEECC
T ss_conf 9999999694998957616888989999222249--999----858998-5-89999999981----99-9677099665
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 54333322222223322322223333232222222222222222222223222103331000122122012113542100
Q gi|254780602|r 99 GAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSG 178 (400)
Q Consensus 99 G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG 178 (400)
|+++.|..+. .++.+|+ ++++.|+|..|...+...|.++++++... + .+.+.++.+++||||||||
T Consensus 79 Gs~elI~~l~-~~l~~~~-v~i~~ptfseY~~a~~~~G~~v~~~~~~~--------~----~l~~~~~~v~l~nPNNPTG 144 (339)
T PRK06959 79 GSQAAIRALP-ALLPRGR-VGIAALAYSEYAPAFARHGHRVVPLDIAA--------D----TLPATLTHAIVVNPNNPTA 144 (339)
T ss_pred CHHHHHHHHH-HHHCCCC-EEEECCCHHHHHHHHHHCCCEEEECCCCH--------H----HCCCCCCEEEEECCCCCCC
T ss_conf 7999999999-9828886-89945203677899998298555137334--------3----3735689899805807103
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00123333211122333332011101221100000122332221112333225741465443223445444221101226
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI 258 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li 258 (400)
..++.++++++++.|.++ +.++|.||+|.++. +. .++.... + .+++|+++||||.|+++|+|+||++++++++
T Consensus 145 ~~~~~~~l~~~~~~~~~~-~~~lvvDEAy~df~--~~--~s~~~~~-~-~~nlivlRS~sK~~gLaGlRlGy~~a~~~~i 217 (339)
T PRK06959 145 ERLPAARLLRWHAQLAAR-GGTLIVDEAFADTG--AH--ASLAAHT-H-RPGLVVLRSVGKFFGLAGVRAGFVLAAPALL 217 (339)
T ss_pred CCCCHHHHHHHHHHCCCC-CCEEEEEHHHHHHC--CC--HHHHHHC-C-CCCEEEEEECCHHHCCCCCCEEEEECCHHHH
T ss_conf 888999999999855413-88899973444526--65--4557641-6-9998998415676458764636443799999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 87531001222332222222222223467643222222110000000245530477603302740899862641023321
Q gi|254780602|r 259 KSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
+++.+.+. ..+++++.|.++.++|. +++|+++.+..+.+.|+.+.+.|+.. |+.+. + ...|+|...
T Consensus 218 ~~l~~~~~--pw~v~~~a~~a~~aal~-d~~~~~~~~~~l~~~r~~L~~~L~~~-g~~~~-~-~~lF~~~~~-------- 283 (339)
T PRK06959 218 AALRDALG--AWTVSGPARHAVRAAFA-DRAWQAAMRERLAADGARLAALLRAH-GFAVH-A-TPLFSWTDD-------- 283 (339)
T ss_pred HHHHHHCC--CCCCCHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCC-C-CEEEEEECC--------
T ss_conf 99995389--98977999999999963-99999999999999999999999977-99866-7-205898468--------
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 1332248989999999987397998350228997289996299999999999999999860
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
.+..++.+.|+ ++||.|+ .|+.++++||++..++++.+.-++.|++.+..|
T Consensus 284 ------~~a~~~~~~L~-~~GIlVR---~f~~p~~LRi~vp~~e~e~~RL~~AL~e~l~~~ 334 (339)
T PRK06959 284 ------PRAAALHAALA-ARGIWTR---YFAAPPSVRIGLPADEAEWQRLEDALAECVPTL 334 (339)
T ss_pred ------CCHHHHHHHHH-HCCEEEE---ECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------89999999998-4992995---889999889867899999999999999999986
No 101
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=100.00 E-value=7e-45 Score=293.28 Aligned_cols=332 Identities=23% Similarity=0.334 Sum_probs=275.4
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875699877898999999998642101333322332334543333222222
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
.+++||+..-....+|-.++-++..+|+. .-+||+.+ ++.||+|+|++. +++.+.|+-|||+.++|.++..+
T Consensus 5 ~~lLDFsAninPlgpP~S~~aa~~~aLd~-~~rYPD~d-Y~hlrqA~AdH~------q~~~dwvl~gnG~~e~i~la~~t 76 (349)
T TIGR01140 5 DDLLDFSANINPLGPPASVKAALAAALDA-LERYPDDD-YIHLRQALADHH------QVAADWVLAGNGELESIRLAAET 76 (349)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCCC-HHHHHHHHHHHH------CCCCCCEECCCCCHHHHHHHHHH
T ss_conf 43032434578888760204589874278-76088843-189999986541------25601254599727888998861
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCHHH----HHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 233223222233332322222222222222--222222232221033----31000122122012113542100001233
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVALCGGIPV--FVDTQQDDNFQVSPE----KLEQAITPKTKWLFLNSPSNPSGVVYSQN 184 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~--~v~~~~~~~~~~d~~----~l~~~i~~~~k~i~l~nP~NPTG~v~s~~ 184 (400)
+..+||.++|+.|+|..|-...+..|+++. ++.+++..+|...-| ++-+++.+.-..+++||||||||..+.++
T Consensus 77 ~~~~Gd~~~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPseiA~l~A~~s~h~~lilctPnNPtG~l~~r~ 156 (349)
T TIGR01140 77 LVSRGDAVLVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEIALLDAVTSEHDLLILCTPNNPTGDLLERD 156 (349)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCH
T ss_conf 47888757870887026799998569812234577316888745576456654126883313531117676989862247
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH-HHHHHHH
Q ss_conf 332111223333320111012211000001223322211123332257414654432234454442211012-2687531
Q gi|254780602|r 185 RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS-LIKSMIV 263 (400)
Q Consensus 185 ~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-li~~l~~ 263 (400)
++++|++-| |.-|+-+|.||++-+|+-.|.+ +++..-..+ ..+++++.|++|.|++||+|+||+|+..+ .+.++..
T Consensus 157 ~l~A~a~rc-~~~N~~LllDEAF~dF~pPG~E-~~l~p~l~~-~P~~~vlRSLTKfy~lPGLRlGylva~~Da~la~~r~ 233 (349)
T TIGR01140 157 ALRALADRC-KAVNIELLLDEAFLDFLPPGEE-TSLVPSLKD-TPNVVVLRSLTKFYALPGLRLGYLVAVDDALLARLRA 233 (349)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCC-CCCCCHHHC-CCCEEEECCHHHHHCCHHHHHHHHHCCCHHHHHHHHH
T ss_conf 899999888-8740466665565157898644-343413326-8978997111554025024454555166178999997
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 00122233222222222222346764322222211000000024553047760330274089986264102332113322
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDV 343 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~ 343 (400)
.+. ..+++.+...++..+|+ .++|....++.+.+.|..+.+.|.++|++.++++++.| +.+++.
T Consensus 234 ~r~--pW~vnalAaaag~~al~-~sef~q~tw~wl~~erar~~qaL~~lP~l~v~Ps~anf-LLl~~~------------ 297 (349)
T TIGR01140 234 ARR--PWSVNALAAAAGAAALR-DSEFRQETWRWLAEERARLRQALADLPLLDVYPSRANF-LLLKVE------------ 297 (349)
T ss_pred HCC--CCCCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC-EEEECC------------
T ss_conf 428--99877689999999876-67899999874366778999999717887558888761-145458------------
Q ss_pred CCCHHHHHHHHHHHCCEEEECCCCCC-C-CCEEEEEEECCH--HHHHHHHH
Q ss_conf 48989999999987397998350228-9-972899962999--99999999
Q gi|254780602|r 344 IRTDLDFVNGLLEIEKVAVVQGSSFG-H-GPSIRISYAVSD--AILEEACV 390 (400)
Q Consensus 344 ~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~-~~~iRis~~~~~--e~l~~al~ 390 (400)
..+.|+.++|+.+.+|.+..+..|- - ..|+|++.-+.. ++|-.|+.
T Consensus 298 -~~~~dl~~~llt~~~IliRdc~~fpgLds~~~RVAvRt~a~N~rLlaALa 347 (349)
T TIGR01140 298 -REDVDLQEELLTKERILIRDCLSFPGLDSDYYRVAVRTAAENDRLLAALA 347 (349)
T ss_pred -CCCHHHHHHHHHHCCCCHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHH
T ss_conf -98688999998743410012057888887527888528554789999961
No 102
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-42 Score=275.85 Aligned_cols=359 Identities=21% Similarity=0.356 Sum_probs=271.5
Q ss_pred HHHHHHHHHHH-HHHCCCCEEECCCCCCCCCCCHHHHH----HHHHHHHCCC-----CCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 89999999999-99869972665658974988999999----9999983887-----56998778989999999986421
Q gi|254780602|r 15 ATLVAAQRVRD-LRSKGIDVLCLTAGEPDFDMPENVKY----AVVRAMERGE-----TKYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 15 ~~~~~~~~~~~-~~~~g~~ii~l~~G~p~~~~p~~i~~----a~~~al~~~~-----~~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
.+..+.....+ ++..| .|.|+.|+|-. . |++.+ ...+.+.++. ..|..++|...|-+++++.++++
T Consensus 15 Gi~~lMdDl~d~Lrt~g--~imLggGNPa~-i-Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ 90 (417)
T COG3977 15 GITQLMDDLNDGLRTPG--AIMLGGGNPAR-I-PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRRE 90 (417)
T ss_pred HHHHHHHHHHHHCCCCC--CEEECCCCCCC-C-HHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 09999998876515887--15656998543-7-34999999999999855607778754899764169999999999897
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCC--CCCCC-CCCCCCCCCCCCC----CCCCCCCCCCCCCCC--CCC
Q ss_conf 0133332233233454333322222223---3223--22223-3332322222222----222222222222232--221
Q gi|254780602|r 85 NDLHYTSDQIIVGTGAKHVIFNALMATV---NMGD--EVLIP-RPYWVSYPDMVAL----CGGIPVFVDTQQDDN--FQV 152 (400)
Q Consensus 85 ~g~~~~~e~I~it~G~~~~l~~~~~~~~---~~Gd--~Vlv~-~P~y~~y~~~~~~----~g~~~~~v~~~~~~~--~~~ 152 (400)
+||+++++||.+|||++.+.+-++..+. ..|+ +|++| .|.|..|..+.-. .-++|- +.+.+++. |++
T Consensus 91 yGwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~-iel~~~g~FKY~v 169 (417)
T COG3977 91 YGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPN-IELLPAGQFKYHV 169 (417)
T ss_pred HCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCHHHCCCCCCCCCCCCEEECCCC-CCCCCCCCEEECC
T ss_conf 578766441563278611588998875476679851046643683432655446572123552687-5326666622137
Q ss_pred HHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCE
Q ss_conf 033310001221220121135421000012333321112233333201110122110000012233222--111233322
Q gi|254780602|r 153 SPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV--NVEPSLYER 230 (400)
Q Consensus 153 d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~--~~~~~~~~~ 230 (400)
|++.+. +.+.+.+|+++-|.||||.|++.+|+.+|..+ +++|++.+|.|.+|. .+|+.+- ...+-+.+|
T Consensus 170 DF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldal-A~~~giPliIDnAYg------~PFP~iifsd~~~~w~~N 240 (417)
T COG3977 170 DFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDAL-ARQHGIPLIIDNAYG------VPFPGIIFSDATPLWNEN 240 (417)
T ss_pred CHHHHC--CCCCEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHCCCCEEEECCCC------CCCCCEECCCCCCCCCCC
T ss_conf 788813--36760269964788988773648899989987-422389679735667------997862003564156787
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CCC-CCCCCCCCCCCCCHHH
Q ss_conf 5741465443223445444221101226875310012223322222222222234676--432-2222211000000024
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ--DFV-VNNRKIFEYRRDLCVA 307 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~--~~~-~~~~~~~~~~r~~~~~ 307 (400)
+|.+.|+||. ++||.|+|.++++++++..+..+.......+....+..++.+++.++ ..- +-.|-.|+++.+...+
T Consensus 241 iilC~SLSK~-GLPG~R~GIiIane~viqaitnmn~iisLap~~~G~Aiaa~mie~gdl~rlseqVIrPFY~~~~q~~~~ 319 (417)
T COG3977 241 IILCMSLSKL-GLPGSRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIA 319 (417)
T ss_pred EEEEEEHHHC-CCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7888314334-898730357962699999997114535316787568999988602428889998643888988999999
Q ss_pred HHHC-CCC--CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--C-------CEEE
Q ss_conf 5530-477--60330274089986264102332113322489899999999873979983502289--9-------7289
Q gi|254780602|r 308 QLQG-VPG--IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--G-------PSIR 375 (400)
Q Consensus 308 ~L~~-~~g--~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~-------~~iR 375 (400)
.|+. ++- +.+++|+|+.|+|+-+.++ ..+++++.++| ++.||+++||+.|-. + ..+|
T Consensus 320 ~l~~~lp~~~~~iHkpEGAIFlWLWf~dL----------PItt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~hqC~R 388 (417)
T COG3977 320 ILRRYLPEYRCLIHKPEGAIFLWLWFKDL----------PITTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHTHQCMR 388 (417)
T ss_pred HHHHHCCCCCEEEECCCCCEEEHHHHCCC----------CCCHHHHHHHH-HHCEEEEECCCCCCCCCCCCCCCCCCEEE
T ss_conf 99986577652542687515413355358----------76689999999-86868994463247899988876122478
Q ss_pred EEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 996299999999999999999860
Q gi|254780602|r 376 ISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 376 is~~~~~e~l~~al~rl~~~l~~l 399 (400)
++++.++++++.++++|++.++++
T Consensus 389 mn~~~~~e~ie~Gva~lae~ve~~ 412 (417)
T COG3977 389 MNYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred EECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 753698799999999999999999
No 103
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-41 Score=270.74 Aligned_cols=329 Identities=22% Similarity=0.305 Sum_probs=237.9
Q ss_pred CCCCCCCCHHHHHHHHHHH-HHH-CCCCC--CCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6998778989999999986-421-01333--3223323345433332222222-----3322322223333232222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKF-RRD-NDLHY--TSDQIIVGTGAKHVIFNALMAT-----VNMGDEVLIPRPYWVSYPDMVA 133 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~-~~~-~g~~~--~~e~I~it~G~~~~l~~~~~~~-----~~~Gd~Vlv~~P~y~~y~~~~~ 133 (400)
.||.+.-....-|.|.+.| .+. +|-.- ..=+++.|-|++.||.-+|..+ +++||+|.+..|.|.+|..+.+
T Consensus 133 nYPvP~RmL~~~E~Iv~~YL~~em~~~~~~~~~fdlFatEGgTAAM~YiF~sL~~N~LL~~GDkIAi~~PIFTPYlEIP~ 212 (531)
T PRK09275 133 NYPVPDRMLVHTEKIVKDYLRQEMCGNRPPPGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE 212 (531)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCC
T ss_conf 89996788898999999999999628999988731674167205799999999975887889878995677776301677
Q ss_pred C--CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCEEECCCCCCCC
Q ss_conf 2--2222222222222322210333100012212201211354210000123333211122333-332011101221100
Q gi|254780602|r 134 L--CGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVR-NPHVHIISDDIYEHI 210 (400)
Q Consensus 134 ~--~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~-~~~i~ii~De~Y~~l 210 (400)
+ .+.+++.+..+++++|+..-++|+++-+|+.|+++++||+||++..++.+.+++|.++... +.|+.||.||+|+.|
T Consensus 213 L~~Y~l~vV~i~a~~~~~WQy~d~EleKL~DP~IKAlf~VNPsNP~S~~ls~e~l~~i~~IV~~~nPdLmIiTDDVYgTF 292 (531)
T PRK09275 213 LPDYDLEVVHISADEKNEWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESLEKIADIVKEDRPDLMIITDDVYGTF 292 (531)
T ss_pred CCCCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCC
T ss_conf 66678628998556545887798999874497711899989999866656999999999999742998799954653226
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH-----HHHHH--------HH--------------
Q ss_conf 0001223322211123332257414654432234454442211012-----26875--------31--------------
Q gi|254780602|r 211 VYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS-----LIKSM--------IV-------------- 263 (400)
Q Consensus 211 ~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-----li~~l--------~~-------------- 263 (400)
+. .+.|+.+.. +.|||.++||||.||++|||+|++..+++ +|+.+ .+
T Consensus 293 ~~---~F~Sl~a~~---P~NTi~VYSfSKyFGaTGWRLG~Ialh~~NvfD~~i~~Lp~~~k~~L~~RY~~lt~~P~~lkF 366 (531)
T PRK09275 293 VD---DFRSLFAEL---PYNTLLVYSFSKYFGATGWRLGVIALHEDNVFDKLIAELPEEKKKELDKRYSSLTTEPEKLKF 366 (531)
T ss_pred CC---CCEEHHHHC---CCCEEEEEEEHHCCCCCCCCCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCH
T ss_conf 45---646365648---875478886310058844110344541033077999866887899999877554688233540
Q ss_pred ----------HCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEE
Q ss_conf ----------001222332222222222-----22346764322222211000000024553047760330274089986
Q gi|254780602|r 264 ----------LQGQQTSGACSIAQWAAV-----EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYP 328 (400)
Q Consensus 264 ----------~~~~~~~~~~~~~q~a~~-----~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~ 328 (400)
+.-+.+.|.|+|-|..+. ..+++.+.|....++.+++|.+.+++.|. ++ ....+-.++||.-+
T Consensus 367 IDRlVADSR~VALnHTAGLStPQQvqM~LFsl~~L~d~~~~Yk~~~~~ii~~R~~~L~~~lg-~~-~~~~~~~~~YYt~i 444 (531)
T PRK09275 367 IDRLVADSRQVALNHTAGLSTPQQVQMALFSLFSLLDEEDAYKKAMKDIIRRRYKALYEGLG-LP-EPEDPNNAAYYTLI 444 (531)
T ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC-CC-CCCCCCCCCEEEEE
T ss_conf 67765217888876603788099999999999986277338999999999999999998549-99-88898765524566
Q ss_pred ECCCCCCCCCC-----CCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC-CEEEEEEE-CCHHHHHHHHHHHHHHHHHC
Q ss_conf 26410233211-----33224898999999998739799835022899-72899962-99999999999999999860
Q gi|254780602|r 329 SCQDLIGKKSP-----SGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG-PSIRISYA-VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 329 ~~~~~~~~~~~-----~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-~~iRis~~-~~~e~l~~al~rl~~~l~~l 399 (400)
|+........- ......+..+|.-+|++++||++.||.+||.+ ..+|+|++ .++++..+.-+.|.+.++.+
T Consensus 445 dl~~~a~~~yg~~F~~~l~~~~~p~d~lfrLA~e~~vVLl~G~GF~~p~ws~RVSLANL~~~dY~~IG~~i~~~l~eY 522 (531)
T PRK09275 445 DLEEWAEKNYGKEFAEYLKKNYSPLDLLFRLAEETGIVLLPGGGFGGPEWSLRVSLANLNEEDYAKIGKSIRKLLDEY 522 (531)
T ss_pred EHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 099999987678999999972888889999998737899558877999862588736899889999999999999999
No 104
>KOG0633 consensus
Probab=100.00 E-value=2.4e-35 Score=235.33 Aligned_cols=331 Identities=21% Similarity=0.272 Sum_probs=248.4
Q ss_pred HCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897-49889999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r 28 SKGIDVLCLTAGEP-DFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 28 ~~g~~ii~l~~G~p-~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
+.|.+++.+...+. -.|.|.. .| =.+.|++.+ ..+|+.+.+.- -+.++|+|+++.|+.+.|.+
T Consensus 38 a~G~~iv~ld~~e~~ryPdP~q-~e--------fk~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~ID~ 101 (375)
T KOG0633 38 ALGRDIVKLDANENPRYPDPEQ-ME--------FKYVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELIDL 101 (375)
T ss_pred HCCCCCEEECCCCCCCCCCHHH-CC--------CCCCCCCCC-CCHHHHHCCCC------CCCCCCCEEEECCCHHHHHH
T ss_conf 4099736753655789968787-00--------330147834-21112211668------99872446772172888988
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCC
Q ss_conf 222223322-32222333323222222222222222222222322210333100012--212201211354210000123
Q gi|254780602|r 107 ALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQ 183 (400)
Q Consensus 107 ~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~ 183 (400)
++++.|.|| ++|+.--|+|..|.-.+...++.++.+|+.+ +|.++.|.+.+.+. .+.|.+++++|+||||+.++.
T Consensus 102 iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ik~ 179 (375)
T KOG0633 102 IIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSIIKE 179 (375)
T ss_pred HHHHEECCCCCCEEECCCCCEEEEEEEECCCCEEEEECCCC--CCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCH
T ss_conf 78100058843036569854058997403773479803788--7555699999998326643289981798987330338
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33321112233333201110122110000012233222111233322574146544322344544422110122687531
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
+.+.+|.+.- . +.+++.||+|-+|.-++ |-+.+... ++|.+++.+|||+||++|+|+||...+.++++-+.+
T Consensus 180 ~di~KiLe~p-~--nglVVvDEAYidFsg~~----S~~~lV~k-YpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~ 251 (375)
T KOG0633 180 DDILKILEMP-D--NGLVVVDEAYIDFSGVE----SRMKLVKK-YPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNR 251 (375)
T ss_pred HHHHHHHHCC-C--CCEEEEEEEEEEECCCC----CCCHHHHH-CCCEEEHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
T ss_conf 8999998298-8--83799750027602540----02457674-886522545555417532675033352789999986
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEECCCCEEEEEECCCCCCCCCCCC
Q ss_conf 001222332222222222223467-64322222211000000024553047760-3302740899862641023321133
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMIPDGAFYLYPSCQDLIGKKSPSG 341 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~p~g~~y~~~~~~~~~~~~~~~~ 341 (400)
++. ..+.+.+.-.++++++... -.+++..|+...+.|.++.+.|.+++++. ++-+--+-|+.+.+.+-.+
T Consensus 252 ~Ka--PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n------ 323 (375)
T KOG0633 252 AKA--PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN------ 323 (375)
T ss_pred CCC--CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC------
T ss_conf 228--852162457999986180112278999999999999998776327654577786666579999707873------
Q ss_pred CCCCCHHHHHHHHHHHCCEEEEC-CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 22489899999999873979983-50228997289996299999999999999999
Q gi|254780602|r 342 DVIRTDLDFVNGLLEIEKVAVVQ-GSSFGHGPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 342 ~~~~~~~~~~~~Ll~~~gV~v~p-G~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
.-+..+..+++.++||.|.- |+.-|..|++||+.++++|+-. -++-||.|+
T Consensus 324 ---~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Eentv-L~k~~K~~l 375 (375)
T KOG0633 324 ---GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEENTV-LMKCLKQFL 375 (375)
T ss_pred ---HHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEECCCCCCCHH-HHHHHHHHC
T ss_conf ---7889999998875666999717850465008997178642208-999998659
No 105
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.3e-34 Score=229.34 Aligned_cols=356 Identities=15% Similarity=0.158 Sum_probs=245.9
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCC---CC--CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHH
Q ss_conf 9873897589999999999998699726656589---74--9889999999999983887-5699877898999999998
Q gi|254780602|r 7 ILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGE---PD--FDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEK 80 (400)
Q Consensus 7 ~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~---p~--~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~ 80 (400)
.+....|-+++.+.+..++-....+ |||++|- -+ -+..+.|++|-...+++.. ..|.|..|.+++++++.+.
T Consensus 4 ~l~~~p~Dpil~l~~~f~~D~~p~K--vnLgvGvYrde~G~~~vl~aVk~Ae~~l~~~~~~k~Ylpi~G~~~f~~~~~~L 81 (397)
T PRK09257 4 HLEAAPADPILGLMEAFRADPRPDK--VNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKSYLPIEGLAAYNQAVQEL 81 (397)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCC--EEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 6777899857799999822999674--77302378999989166579999999997378998787978779999999998
Q ss_pred HHHHCCCC---CCCCCCC--CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 64210133---3322332--3345433332222222--332232222333323222222222222222222222322210
Q gi|254780602|r 81 FRRDNDLH---YTSDQII--VGTGAKHVIFNALMAT--VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVS 153 (400)
Q Consensus 81 ~~~~~g~~---~~~e~I~--it~G~~~~l~~~~~~~--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d 153 (400)
+ +|-+ +..++|. -|.|++.||.+....+ ..|+.+|.+++|+|++|..+++.+|.++..+|.-....-.+|
T Consensus 82 ~---fG~~~~~~~~~rv~~vQt~gGTGAlrl~a~fl~~~~p~~~v~is~PtW~Nh~~If~~aGl~v~~Y~y~d~~t~~ld 158 (397)
T PRK09257 82 L---FGADSPAIAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLD 158 (397)
T ss_pred H---CCCCCHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCC
T ss_conf 4---2787556662525888547753689999999998589986997699962038999977980577655645457628
Q ss_pred HHHHHCCCCC--CCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf 3331000122--1220121135-4210000123333211122333332011101221100000122--332221112333
Q gi|254780602|r 154 PEKLEQAITP--KTKWLFLNSP-SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ--FSNIVNVEPSLY 228 (400)
Q Consensus 154 ~~~l~~~i~~--~~k~i~l~nP-~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~--~~s~~~~~~~~~ 228 (400)
++.+.+.+.. .-.+|+|..+ |||||.-.+.++|++|++++.+ .+++.+.|-+|..|.- |.. ...+-.+. +..
T Consensus 159 f~~~~~~L~~a~~gsvvlLh~ccHNPTG~D~t~eqW~~ia~~~~~-k~l~p~~D~AYqGf~s-Gl~~Da~~iR~f~-~~~ 235 (397)
T PRK09257 159 FDGMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDEVAELLKE-RGLIPFLDIAYQGFGD-GLEEDAYGLRLFA-AAG 235 (397)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEHHCCCCCC-CHHHHHHHHHHHH-HHC
T ss_conf 999999998289999899725667988999899999999999996-6986888400143346-6899999999999-728
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCC---HHHH----HHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCC---CCCCC
Q ss_conf 2257414654432234454442211---0122----687531001222332222222222223467---643---22222
Q gi|254780602|r 229 ERTLVVNGVSKAYAMTGLRIGYAAG---ALSL----IKSMIVLQGQQTSGACSIAQWAAVEALNGP---QDF---VVNNR 295 (400)
Q Consensus 229 ~~~i~~~S~SK~~~~~G~RiG~~v~---~~~l----i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~---~~~~~ 295 (400)
...++..||||+|++.|.|+|.++. +++. ..++..+.-...+++|...+.++...|+++ .+| +..++
T Consensus 236 ~e~lva~SfSKnfgLY~eRvG~l~vv~~~~~~~~~v~s~l~~~~R~~~S~PP~hGA~iv~~IL~d~~L~~~W~~El~~m~ 315 (397)
T PRK09257 236 LELLVASSFSKNFGLYGERVGALSVVAEDAEEAARVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEQELAEMR 315 (397)
T ss_pred CCEEEEEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 85799840375433346775038998188889999999999999734588983899999999679999999999999999
Q ss_pred CCCCCCCCCHHHHHHCCC---CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 211000000024553047---76033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVP---GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~---g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
++.+..|+.+.+.|++.. .+..+.-|.|||.|.-++ . +-+.+|-++++|.++++
T Consensus 316 ~Ri~~~R~~L~~~L~~~~~~~~w~~i~~q~GmFs~~gls---------------~-~qv~~Lr~~~~IYl~~~------- 372 (397)
T PRK09257 316 DRIKAMRQLLVEALKAKGPDRDFSFILRQRGMFSYSGLT---------------P-EQVDRLREEFGIYAVGS------- 372 (397)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEECCCCC---------------H-HHHHHHHHHCCEEECCC-------
T ss_conf 999999999999999758999962675076605668979---------------9-99999998472514699-------
Q ss_pred EEEEEEE-CCHHHHHHHHHHHHH
Q ss_conf 2899962-999999999999999
Q gi|254780602|r 373 SIRISYA-VSDAILEEACVRIKR 394 (400)
Q Consensus 373 ~iRis~~-~~~e~l~~al~rl~~ 394 (400)
-||+++ .++.+++--.+.|.+
T Consensus 373 -GRIniaGLn~~ni~~vA~AI~~ 394 (397)
T PRK09257 373 -GRINVAGLNEDNIDYVAKAIAA 394 (397)
T ss_pred -CEEEEECCCHHHHHHHHHHHHH
T ss_conf -5689820776638999999999
No 106
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=5.3e-32 Score=214.98 Aligned_cols=357 Identities=15% Similarity=0.178 Sum_probs=246.7
Q ss_pred HHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCC---CC--CCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHH
Q ss_conf 89873897589999999999998699726656589---74--9889999999999983887-569987789899999999
Q gi|254780602|r 6 NILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGE---PD--FDMPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVE 79 (400)
Q Consensus 6 ~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~---p~--~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~ 79 (400)
+++....+-|++.+.+..++-.+. +-|||++|- .+ .|.-+.|++|-+..+++.. ..|.+..|.+++++++++
T Consensus 3 ~~i~~~p~DpIlgL~e~f~~D~R~--~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ 80 (396)
T COG1448 3 EKIEAAPADPILGLKEAFKADPRP--NKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK 80 (396)
T ss_pred CCCCCCCCCCHHHHHHHHHCCCCC--CEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 445668997044799997427986--705500566667989861218999999974026566555786770889999999
Q ss_pred HHHHHCCCC---CCCCCCC--CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 864210133---3322332--3345433332222222--33223222233332322222222222222222222232221
Q gi|254780602|r 80 KFRRDNDLH---YTSDQII--VGTGAKHVIFNALMAT--VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQV 152 (400)
Q Consensus 80 ~~~~~~g~~---~~~e~I~--it~G~~~~l~~~~~~~--~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~ 152 (400)
.+ +|-+ ++.++|. -|.|++.||.++..-+ .-|...|.+++|+|++|..++..+|.++..||.-...+-.+
T Consensus 81 ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~ 157 (396)
T COG1448 81 LL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL 157 (396)
T ss_pred HH---CCCCCHHHHHHHHHHEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 96---489817777655763006776128999999999848886288479982758999996698145310354666642
Q ss_pred HHHHHHCCCCC--CCCCEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCC
Q ss_conf 03331000122--1220121135-4210000123333211122333332011101221100000122-332221112333
Q gi|254780602|r 153 SPEKLEQAITP--KTKWLFLNSP-SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ-FSNIVNVEPSLY 228 (400)
Q Consensus 153 d~~~l~~~i~~--~~k~i~l~nP-~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~-~~s~~~~~~~~~ 228 (400)
|++.+-+.++. ...+++|.-+ |||||.-++.++|++|+++. ++.+++.+.|-+|..|.-+-.+ ...+-.+....
T Consensus 158 df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~-~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~- 235 (396)
T COG1448 158 DFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLI-KERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG- 235 (396)
T ss_pred CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHC-
T ss_conf 57999999973789988998367789889999999999999999-9769823663244442124677899999999729-
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCC---HHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCCC---CC---CCCCC
Q ss_conf 2257414654432234454442211---01226----875310012223322222222222234676---43---22222
Q gi|254780602|r 229 ERTLVVNGVSKAYAMTGLRIGYAAG---ALSLI----KSMIVLQGQQTSGACSIAQWAAVEALNGPQ---DF---VVNNR 295 (400)
Q Consensus 229 ~~~i~~~S~SK~~~~~G~RiG~~v~---~~~li----~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~---~~---~~~~~ 295 (400)
...++.+||||+|++.|.|+|.... +++.. .++....-...++||......+...|+.++ .| +..+|
T Consensus 236 ~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr 315 (396)
T COG1448 236 PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMR 315 (396)
T ss_pred CCEEEEEHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 85899710001244343002315888278899999999999999863589841239999999489999999999999999
Q ss_pred CCCCCCCCCHHHHHHCC-C--CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 21100000002455304-7--76033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGV-P--GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~-~--g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
+++.+.|+.+.+.|++. + .+.++..|-|||.+.-++ .+=+.+|.++++|.++.. |
T Consensus 316 ~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls----------------~~QV~rLree~~IY~v~s------G 373 (396)
T COG1448 316 QRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGLS----------------PEQVDRLREEFGIYLVAS------G 373 (396)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCEEECCCCC----------------HHHHHHHHHHCCEEEECC------C
T ss_conf 999999999999998627886622475467524458999----------------999999998566799537------8
Q ss_pred EEEEEEE-CCHHHHHHHHHHHH
Q ss_conf 2899962-99999999999999
Q gi|254780602|r 373 SIRISYA-VSDAILEEACVRIK 393 (400)
Q Consensus 373 ~iRis~~-~~~e~l~~al~rl~ 393 (400)
|||.+ .++.+++.-.+.|.
T Consensus 374 --Ri~vaGl~~~ni~~va~ai~ 393 (396)
T COG1448 374 --RINVAGLNTSNIDYVAKAIA 393 (396)
T ss_pred --EEEECCCCHHHHHHHHHHHH
T ss_conf --14653687440899999998
No 107
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=99.95 E-value=1.5e-28 Score=193.93 Aligned_cols=287 Identities=18% Similarity=0.243 Sum_probs=194.0
Q ss_pred CHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCC---C---CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9899999999864210133332-233233454333322222223322---3---22223333232222222222222222
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTS-DQIIVGTGAKHVIFNALMATVNMG---D---EVLIPRPYWVSYPDMVALCGGIPVFV 142 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~-e~I~it~G~~~~l~~~~~~~~~~G---d---~Vlv~~P~y~~y~~~~~~~g~~~~~v 142 (400)
.+||-++|.+ +.+--|--+.. -.|++++|++|.+..++.++..++ + .|+-..|+|+.|.....++.-....+
T Consensus 45 s~eLe~~Ir~-LH~~VGNAvtdgr~iv~GtGsTQL~~Aav~ALs~~~~~~~~p~~VVa~aPyYs~y~~qT~~~~s~~y~w 123 (363)
T pfam04864 45 SPELEREIRR-LHRAVGNAVTDDRYIVFGTGSTQLLQAAVYALSPNVTPTSPPVKVVAAVPYYSVYKEQTSYFDSKGYEW 123 (363)
T ss_pred CHHHHHHHHH-HHHHHCCCEECCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHCCCCCEE
T ss_conf 7999999999-998633421066169991788999999998638899987887323556876644287888845678446
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222322210333100012212201211354210000123333211122333332011101221100000122332221
Q gi|254780602|r 143 DTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVN 222 (400)
Q Consensus 143 ~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~ 222 (400)
.-+ .......=++.+=.=++|+||||.|.+ .+++++ .....+|.|-+|-+ ..+++|..
T Consensus 124 ~Gd--------a~~~~~~~~~~~~IElVtSPNNPdG~l-----r~aV~~----g~~~k~i~D~aYYW-----PhyTpIt~ 181 (363)
T pfam04864 124 KGN--------ASAYVNTDNPGPFIELVTSPNNPDGTL-----REAVID----GSEAKVIHDLAYYW-----PHYTPITY 181 (363)
T ss_pred CCC--------HHHHCCCCCCCCEEEEEECCCCCCCHH-----HHHHCC----CCCCEEEEEEEEEC-----CCCCCCCC
T ss_conf 346--------898367999887289983899984013-----366506----99841887520006-----66667677
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC----------CCCC
Q ss_conf 1123332257414654432234454442-2110122687531001222332222222222223467----------6432
Q gi|254780602|r 223 VEPSLYERTLVVNGVSKAYAMTGLRIGY-AAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP----------QDFV 291 (400)
Q Consensus 223 ~~~~~~~~~i~~~S~SK~~~~~G~RiG~-~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~----------~~~~ 291 (400)
. .|..|.+.++||..|.+|+|+|| ++-++++.++|.++.+..+.|++.-+|..+++.|..- .+.+
T Consensus 182 ~----aD~DIMLFTlSK~TGHAGsRiGWALVKD~~VakkM~~y~~lNt~GvS~dSQlRa~kiLkvv~~~~~~~~~~~~iF 257 (363)
T pfam04864 182 P----ADEDIMLFTMSKYTGHAGSRFGWALVKDEEVAKKMVEYIELNTIGVSKESQLRTLKILKVVLATCKTESGTMGFF 257 (363)
T ss_pred C----CCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 7----767679898612236762523478863799999999997650530688999999999999997632676623578
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCEE--EECCC-CE----------EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 22222110000000245530477603--30274-08----------9986264102332113322489899999999873
Q gi|254780602|r 292 VNNRKIFEYRRDLCVAQLQGVPGIRY--MIPDG-AF----------YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIE 358 (400)
Q Consensus 292 ~~~~~~~~~~r~~~~~~L~~~~g~~~--~~p~g-~~----------y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~ 358 (400)
+--++..++|-+.+.+.++...-++. ..|+. .| |.|++|.. ...+-|..+|+++
T Consensus 258 ~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~~~sPafaWlkCe~-------------eed~DC~~~L~~~ 324 (363)
T pfam04864 258 DFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIREPSPAYAWLKCEW-------------EEDTDCYEVLREG 324 (363)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEECC-------------CCHHHHHHHHHHC
T ss_conf 999999999999999997115807726778776654232168998637997266-------------3201799999878
Q ss_pred CEEEECCCCCCC-CCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 979983502289-97289996299999999999999999
Q gi|254780602|r 359 KVAVVQGSSFGH-GPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 359 gV~v~pG~~Fg~-~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
||+.++|..||. +.|||||+..+.+++++.++||++++
T Consensus 325 ~I~~r~G~~Fga~~~YVRlSll~~~d~Fd~lleRL~~lV 363 (363)
T pfam04864 325 KILTRSGERFGADSRYVRLSLIKTQDDFDQLLQRLKSLV 363 (363)
T ss_pred CEECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHC
T ss_conf 864568764588987699984068878999999998549
No 108
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=99.94 E-value=1.4e-27 Score=188.04 Aligned_cols=329 Identities=21% Similarity=0.280 Sum_probs=227.9
Q ss_pred CC-CCEEECCCCCCCCCCCHHHHHHHHHHHHCC---CCC--CC----CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 69-972665658974988999999999998388---756--99----877898999999998642101333322332334
Q gi|254780602|r 29 KG-IDVLCLTAGEPDFDMPENVKYAVVRAMERG---ETK--YT----AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 29 ~g-~~ii~l~~G~p~~~~p~~i~~a~~~al~~~---~~~--Y~----~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
.| ++++-|--|--. .=|..|++|+.+.-.+. .++ |. .+..+.+.|+.+++|.+.. ++++|++|-
T Consensus 15 ~Gg~pLvYLDsAAT~-QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~AT~~YE~~R~kva~FiNA~-----~~~EIvFT~ 88 (409)
T TIGR01979 15 NGGKPLVYLDSAATS-QKPQAVIDAVEEYYRKSNANVHRGIHTLSVRATEAYEEAREKVAKFINAA-----SAEEIVFTR 88 (409)
T ss_pred CCCCCEEEECCCCCC-CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCEEEEC
T ss_conf 799841773485100-28477999999998751670016899999999999999999999850889-----985478707
Q ss_pred CCCCCCCCCCCCC----CCC----CCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 5433332222222----332----232222333----3232222222222222222222223222103331000122122
Q gi|254780602|r 99 GAKHVIFNALMAT----VNM----GDEVLIPRP----YWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 99 G~~~~l~~~~~~~----~~~----Gd~Vlv~~P----~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
|++++|+++..++ +.+ ||+|++..= .-.+|..+++..|+++.++++++++ .+|+|++++.+++|||
T Consensus 89 gtTe~iNLvA~s~g~~~l~~av~pGDeIv~s~mEHHaNiVPWQ~l~~r~GA~lk~~~l~~~G--~ld~~~l~~~~~~~TK 166 (409)
T TIGR01979 89 GTTESINLVAYSWGRSRLKAAVDPGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDG--TLDLDDLEELLTEKTK 166 (409)
T ss_pred CCCHHHHHHHHHHCCCCCHHHCCCCCEEEECCHHHHCCHHHHHHHHHHHCCEEEEEECCCCC--EEEHHHHHHHHHCCCE
T ss_conf 60278899999831101342538988798401110012147999997609878997448876--0518889988326982
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 01211354210000123333211122333332011101221100000122332221112333225741465443223445
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
+|-+++=+|=||++-+.+++. +. ++++|..++.|-+= +.+|-++ +-..-+.-+++.|--|.||-+|
T Consensus 167 lVa~~HvSNVlGtvnP~~ei~---~~-AH~~GA~vlvDGAQ------~~pH~pv---Dv~~ldcDFyvFSGHKmyGPtG- 232 (409)
T TIGR01979 167 LVAITHVSNVLGTVNPVEEII---KL-AHQVGAKVLVDGAQ------AVPHMPV---DVQALDCDFYVFSGHKMYGPTG- 232 (409)
T ss_pred EEEEEEEECCCCCCCCHHHHH---HH-HHHCCCEEEEECCC------CCCCCCC---CHHHHCCCEEEEECCHHHCCCC-
T ss_conf 999974202203014878999---99-86579769986255------7589898---8565578744561004525766-
Q ss_pred CCCCCCCHHHHHHHHHHHC-----------CC-CCC---------CCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4442211012268753100-----------12-223---------322222222----2222346764322222211000
Q gi|254780602|r 247 RIGYAAGALSLIKSMIVLQ-----------GQ-QTS---------GACSIAQWA----AVEALNGPQDFVVNNRKIFEYR 301 (400)
Q Consensus 247 RiG~~v~~~~li~~l~~~~-----------~~-~~~---------~~~~~~q~a----~~~~l~~~~~~~~~~~~~~~~~ 301 (400)
||.+.+.++++++|--.. +. +++ |.|.+.|.. |+.+|+. =-+++..+.-++-
T Consensus 233 -iGVLYGK~~lLe~MPPf~gGG~MI~~V~~~~g~ty~~~P~KFEAGTPniagviGLgaAidYl~~--iG~~~I~~~E~~L 309 (409)
T TIGR01979 233 -IGVLYGKEELLEEMPPFLGGGEMIEEVSLEEGTTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEK--IGLEKIEAHEKEL 309 (409)
T ss_pred -CEEEHHHHHHHHHCCCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHH
T ss_conf -3011278898864778466986157888057711367875456888358999999999999852--3878999999999
Q ss_pred CCCHHHHHHCCCCCEEEECC-----CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC--------C
Q ss_conf 00002455304776033027-----4089986264102332113322489899999999873979983502--------2
Q gi|254780602|r 302 RDLCVAQLQGVPGIRYMIPD-----GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSS--------F 368 (400)
Q Consensus 302 r~~~~~~L~~~~g~~~~~p~-----g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~--------F 368 (400)
..++.+.|.++||+++.-|+ ||- +=.++.+ ...-|. -.+|++.||+|+-|+. |
T Consensus 310 ~~yal~~L~~ipg~~iyGP~~~~~R~g~-isFn~~g------------~HpHDV-g~~LD~~GiAvR~GHHCAqPlm~~~ 375 (409)
T TIGR01979 310 TAYALERLGEIPGLRIYGPRDAEDRGGI-ISFNVEG------------VHPHDV-GTILDEEGIAVRSGHHCAQPLMRRF 375 (409)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCE-EEECCCC------------CCCCHH-HHHCCCCCCEEEECCHHHHHHHHHC
T ss_conf 9999999601898587468774326433-3302588------------870022-3012267756861705324898655
Q ss_pred CCCCEEEEEEE--CCH---HHHHHHHHHHHHHH
Q ss_conf 89972899962--999---99999999999999
Q gi|254780602|r 369 GHGPSIRISYA--VSD---AILEEACVRIKRFC 396 (400)
Q Consensus 369 g~~~~iRis~~--~~~---e~l~~al~rl~~~l 396 (400)
|-+.-.|.||+ .++ |.|.+|+++.++|+
T Consensus 376 ~v~atcRASf~~YNT~ediD~Lv~aL~~v~~~F 408 (409)
T TIGR01979 376 GVPATCRASFYLYNTEEDIDALVEALKKVRKFF 408 (409)
T ss_pred CCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH
T ss_conf 996367887410389899999999999999860
No 109
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.93 E-value=1.2e-25 Score=176.21 Aligned_cols=333 Identities=17% Similarity=0.147 Sum_probs=210.9
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC--CCC-CCC------CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 72665658974988999999999998388756--998-778------989999999986421013333223323345433
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETK--YTA-VAG------ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~--Y~~-~~G------~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+.|-|.-+--. ++|+.|.+++.+.+...... ... ..| ..+.|+.+|+++ |.+ ++++|++|+|+++
T Consensus 19 ~~iYlD~Aatt-~~p~~V~~a~~~~~~~~~~n~~~~~~~~~~~~~~~~e~aR~~iA~ll----ga~-~~~eI~fts~~Te 92 (401)
T PRK10874 19 AGVYLDSAATA-LKPQAVIEATQQFYSLSAGNVHRSQFAEAQRLTARYEAAREKVAQLL----NAP-DAKNIVWTRGTTE 92 (401)
T ss_pred CCEEEECCCCC-CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC----CCC-CCCEEEEECCHHH
T ss_conf 94897487526-89999999999999864489886410899999999999999999982----969-9897999796589
Q ss_pred CCCCCCCCC----CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCC
Q ss_conf 332222222----3322322223333232----22222222222222222222322210333100012212201211354
Q gi|254780602|r 103 VIFNALMAT----VNMGDEVLIPRPYWVS----YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPS 174 (400)
Q Consensus 103 ~l~~~~~~~----~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~ 174 (400)
++.+++.++ .++||+|++..--++. +....+..|.+++.+|.+.++ .+|++.|+++++++||++.++.-+
T Consensus 93 ~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g~~v~~~p~~~~g--~~d~~~l~~~i~~~T~lVai~~vs 170 (401)
T PRK10874 93 SINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADR--LPDVDLLPELITPRSRILALGQMS 170 (401)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHHCCCCEEEEEECCC
T ss_conf 999999999997358998388704413541589999998539636994158888--759999999855896599997966
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 21000012333321112233333201110122110000012233222111233322574146544322344544422110
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
|-||.+.+. ++|+++| +++++++++|-+.+- +.-...+..+ +..++..|.-|.+|..| +|++...
T Consensus 171 n~~G~~~pv---~~I~~~~-~~~g~~~~vDa~Q~~----g~~~idv~~l-----~vD~l~~S~HKl~GP~G--~G~Lyv~ 235 (401)
T PRK10874 171 NVTGGCPDL---ARAITLA-HQAGMVVMVDGAQGA----VHFPADVQQL-----DIDFYAFSGHKLYGPTG--IGVLYGK 235 (401)
T ss_pred CCCCCCCCH---HHHHHHH-HHCCCEEEEECCCCC----CCCCCCHHHH-----CCCEEEEECHHCCCCCC--EEEEEEC
T ss_conf 788655769---9999999-764977997530137----7425466784-----39889987033169981--4999985
Q ss_pred HHHHHHHHHHCCC--------------------CCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 1226875310012--------------------22332222222-222223467-6432222221100000002455304
Q gi|254780602|r 255 LSLIKSMIVLQGQ--------------------QTSGACSIAQW-AAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 255 ~~li~~l~~~~~~--------------------~~~~~~~~~q~-a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++++.+...... ...+.+.+... +..++++.- +.-++...+..+.-.+++.+.|.++
T Consensus 236 ~~~~~~l~P~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~~l~aal~~l~~~~~~~~~~~~~~L~~~~~~~L~~~ 315 (401)
T PRK10874 236 SELLEAMSPWLGGGKMLTEVSFDGFTPQSAPWRLEAGTPNVAGVIGLSAALEWLADIDIEQAESWSRSLATLAEDALAKR 315 (401)
T ss_pred CCHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 30364278653587540023467654255500025778328899999999999996399999999999999999998528
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------CCCCEEEEEEE--CCH
Q ss_conf 77603302740899862641023321133224898999999998739799835022--------89972899962--999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------GHGPSIRISYA--VSD 382 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g~~~~iRis~~--~~~ 382 (400)
+|+....+.++-.+-+.+. .....++... |.++||.+..|+.. |.++.||+||+ .++
T Consensus 316 ~g~~~~~~~~~~i~sf~~~------------gi~~~~l~~~-L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~ 382 (401)
T PRK10874 316 PGFRSFRCQDSSLLAFDFA------------GVHHSDMVTL-LAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQ 382 (401)
T ss_pred CCCCCCCCCCCCEEEEEEC------------CCCHHHHHHH-HHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCH
T ss_conf 9965347999988999879------------9599999999-97789789618534289999859999799965888899
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999998609
Q gi|254780602|r 383 AILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l~ 400 (400)
++++..++.|++.++.||
T Consensus 383 ~dId~li~al~~~v~~lr 400 (401)
T PRK10874 383 SDVDALVNAVDRALELLV 400 (401)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999830
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.93 E-value=2.4e-25 Score=174.49 Aligned_cols=333 Identities=17% Similarity=0.141 Sum_probs=210.9
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCC---CCCC------CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 7266565897498899999999999838875699---8778------989999999986421013333223323345433
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYT---AVAG------ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~---~~~G------~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+.|-|.-+-- -++|+.|.+++.+.+.......+ ...| +.+.|+.+|+++ |.+ ++++|++|+|+++
T Consensus 16 ~~iYlDnAat-t~~p~~V~~a~~~~~~~~~~n~~~s~~~~~~~~~~~~e~aR~~iA~~l----ga~-~~~~Iifts~~Te 89 (398)
T TIGR03392 16 GTVYLDSAAT-ALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL----NAP-DAENIVWTRGTTE 89 (398)
T ss_pred CEEEEECCCC-CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC----CCC-CCCEEEEECCHHH
T ss_conf 9088678632-689899999999999863488875143999999999999999999970----959-9897999587799
Q ss_pred CCCCCCCCC----CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCC
Q ss_conf 332222222----3322322223333232----22222222222222222222322210333100012212201211354
Q gi|254780602|r 103 VIFNALMAT----VNMGDEVLIPRPYWVS----YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPS 174 (400)
Q Consensus 103 ~l~~~~~~~----~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~ 174 (400)
++.+++.++ .++||+|++..-.++. +....+..|.+++.+|.+.++ .+|++.++++++++||++.++.-+
T Consensus 90 ~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g~~v~~~~~~~~~--~~d~~~l~~~i~~~T~lVsi~~vs 167 (398)
T TIGR03392 90 SINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADL--LPDIRQLPELLTPRTRILALGQMS 167 (398)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHCCCCCCEEEEECCC
T ss_conf 999898776887239989899824400342389998876448527996147889--879999998525787089982555
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 21000012333321112233333201110122110000012233222111233322574146544322344544422110
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
|=||.+.+. ++|+++| +++++++++|-+.+- +.-...+..+ +--++..|.-|.+|..| +|++...
T Consensus 168 n~~G~i~pi---~~I~~~~-~~~g~~~~vDa~Q~~----g~~~idv~~~-----~~D~~~~S~hKl~GP~G--~G~Ly~~ 232 (398)
T TIGR03392 168 NVTGGCPDL---ARAITLA-HQYGAVVVVDGAQGV----VHGPPDVQAL-----DIDFYAFSGHKLYGPTG--IGVLYGK 232 (398)
T ss_pred CCCCCCCCH---HHHHHHH-HHCCCEEEEECCCCC----CCCCCCCCCC-----CCCEEEEECCCCCCCCC--EEEEEEC
T ss_conf 678885879---9999999-865974786334115----6203341026-----78779986553569984--1899984
Q ss_pred HHHHHHHHHHCCC--------------------CCCCCCCC-CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 1226875310012--------------------22332222-2222222234676-432222221100000002455304
Q gi|254780602|r 255 LSLIKSMIVLQGQ--------------------QTSGACSI-AQWAAVEALNGPQ-DFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 255 ~~li~~l~~~~~~--------------------~~~~~~~~-~q~a~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++++.+...... ...+.+.+ ...+..++++... .-+++.....+...+++.+.|.++
T Consensus 233 ~~~~~~l~p~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~gl~~al~~l~~~~~~~~~~~~~~L~~~~~~~l~~l 312 (398)
T TIGR03392 233 TELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLAQL 312 (398)
T ss_pred CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 11474379735799734433477764455502114688548789999999999996499999999999999999998638
Q ss_pred CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------CCCCEEEEEEE--CCH
Q ss_conf 77603302740899862641023321133224898999999998739799835022--------89972899962--999
Q gi|254780602|r 313 PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------GHGPSIRISYA--VSD 382 (400)
Q Consensus 313 ~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g~~~~iRis~~--~~~ 382 (400)
+|+....+.++-.+-+.+. .....++... |.+.||.+..|+.+ |.++.||+||+ .++
T Consensus 313 ~g~~~~~~~~~~~~~f~~~------------~~~~~~l~~~-L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~ 379 (398)
T TIGR03392 313 PGFRSFRCPGSSLLAFDFA------------GVHHSDLAAL-LAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQ 379 (398)
T ss_pred CCCCCCCCCCCCEEEEEEC------------CCCHHHHHHH-HHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCH
T ss_conf 9964457999967999879------------9399999999-97789799668665489999868998799967888899
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999998609
Q gi|254780602|r 383 AILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l~ 400 (400)
++++..++.|++.++.|+
T Consensus 380 edId~li~aL~~~l~~l~ 397 (398)
T TIGR03392 380 QDVDALVDAVGAALELLN 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999843
No 111
>PRK09295 selenocysteine lyase; Validated
Probab=99.93 E-value=4.9e-25 Score=172.53 Aligned_cols=333 Identities=16% Similarity=0.152 Sum_probs=208.4
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC-----CCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 6997266565897498899999999999838875-----6998----778989999999986421013333223323345
Q gi|254780602|r 29 KGIDVLCLTAGEPDFDMPENVKYAVVRAMERGET-----KYTA----VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 29 ~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~-----~Y~~----~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
.|.++|-|--+--. +.|+.|.+++.+.+.+... .|.. ..-..+.|+.+|++++ . -++++|++|+|
T Consensus 20 ~~~~~iYlDnaAtt-~~p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~lg----a-~~~~eIvFts~ 93 (406)
T PRK09295 20 NGLPLAYLDSAASA-QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFIN----A-RSAEELVFVRG 93 (406)
T ss_pred CCCCEEEECCCCCC-CCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----C-CCCCEEEEECC
T ss_conf 89975995288537-899999999999998656988864138999999999999999999749----9-99896999378
Q ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEC
Q ss_conf 433332222222----3322322223333232----22222222222222222222322210333100012212201211
Q gi|254780602|r 100 AKHVIFNALMAT----VNMGDEVLIPRPYWVS----YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLN 171 (400)
Q Consensus 100 ~~~~l~~~~~~~----~~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~ 171 (400)
+++++.+++..+ .++||+|++..-.++. +....+..|+++..+|.++++ .+|+|+++++++++||++.++
T Consensus 94 ~Tea~N~~~~~~~~~~~~~gd~vi~s~~EH~s~~~pw~~l~~~~G~~v~~vp~~~~g--~id~~~l~~~i~~~T~LVsv~ 171 (406)
T PRK09295 94 TTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDG--TLQLETLPALFDERTRLLAIT 171 (406)
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCC--CCCHHHHHHHHCCCCEEEEEE
T ss_conf 169988888666886058989899946642878889999999649624898038998--485999998753796399997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 35421000012333321112233333201110122110000012233222111233322574146544322344544422
Q gi|254780602|r 172 SPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA 251 (400)
Q Consensus 172 nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 251 (400)
.-+|-||.+.+.+ +|+++| ++++++++.|-+.+- +.-...+..+ +.-++..|.-|.+|..| +|++
T Consensus 172 ~vsn~~G~i~pv~---~I~~~~-~~~g~~~~vDaaQ~~----g~~~idv~~l-----~~D~~~~S~HKl~GP~G--~G~L 236 (406)
T PRK09295 172 HVSNVLGTENPLA---EMIALA-HQHGAKVLVDGAQAV----MHHPVDVQAL-----DCDFYVFSGHKLYGPTG--IGIL 236 (406)
T ss_pred ECCCCCCCCCCHH---HHHHHH-HHCCCEEEEECCCCC----CCCCCCHHHH-----HCCEEEEEHHHCCCCCC--EEEE
T ss_conf 1367888717899---999988-755854896423466----8105546663-----15479986142269981--4999
Q ss_pred CCHHHHHHHHHHHCCC---------------------CCCCCCCCCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHH
Q ss_conf 1101226875310012---------------------2233222222-22222234676-43222222110000000245
Q gi|254780602|r 252 AGALSLIKSMIVLQGQ---------------------QTSGACSIAQ-WAAVEALNGPQ-DFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 252 v~~~~li~~l~~~~~~---------------------~~~~~~~~~q-~a~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~ 308 (400)
...+++++.+..+... ...+.+.+.. .+..++++.-. --+++..+..++..+++.+.
T Consensus 237 yv~~~~~~~l~P~~~GG~~~~~~~~~~~~~~~~~p~rfe~GT~n~~~i~gl~aAl~~~~~~g~~~i~~~~~~L~~~l~~~ 316 (406)
T PRK09295 237 YVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQ 316 (406)
T ss_pred EECHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_conf 98334563178631688631100345675535652220588876889999999999999718899999999999999999
Q ss_pred HHCCCCCEEEECCCC--EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------CCCCEEEEEE
Q ss_conf 530477603302740--899862641023321133224898999999998739799835022--------8997289996
Q gi|254780602|r 309 LQGVPGIRYMIPDGA--FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------GHGPSIRISY 378 (400)
Q Consensus 309 L~~~~g~~~~~p~g~--~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g~~~~iRis~ 378 (400)
|++++++++..|+.. ...| .+ ...+..++.. +|++.||.+..|+.+ +.++.+|+||
T Consensus 317 L~~~~~v~~~gp~~r~~ivsf-~~------------~~~~~~~v~~-~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~ 382 (406)
T PRK09295 317 LEQVPDLTLYGPQNRLGVIAF-NL------------GKHHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASL 382 (406)
T ss_pred HHCCCCEEEECCCCCCEEEEE-EC------------CCCCHHHHHH-HHHHCCEEEECCHHHHHHHHHHHCCCCEEEEEC
T ss_conf 736999899588775507999-73------------8989999999-985499899763433304457628996799978
Q ss_pred E--CCHHHHHHHHHHHHHHHHH
Q ss_conf 2--9999999999999999986
Q gi|254780602|r 379 A--VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 379 ~--~~~e~l~~al~rl~~~l~~ 398 (400)
+ .++|+++.-++.|++..+-
T Consensus 383 ~~ynT~eeId~lv~aL~~I~k~ 404 (406)
T PRK09295 383 AMYNTHEEVDRLVAGLQRIHRL 404 (406)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8999999999999999999997
No 112
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=9e-24 Score=164.86 Aligned_cols=312 Identities=17% Similarity=0.168 Sum_probs=195.0
Q ss_pred CCCCHHHHHHHHHHHHCCC-----CCCCCCC----CCHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9889999999999983887-----5699877----898999999998642101333-32233233454333322222223
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGE-----TKYTAVA----GISPLREAIVEKFRRDNDLHY-TSDQIIVGTGAKHVIFNALMATV 112 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~-----~~Y~~~~----G~~~lR~aia~~~~~~~g~~~-~~e~I~it~G~~~~l~~~~~~~~ 112 (400)
-++|+.|++++.+.+.+.. ..|.... -+.+.|+.+|+++ | + +|++|++|+|+++++.+++..+.
T Consensus 9 t~~~~~V~~~~~~~~~~~~~np~~~~~~~~~~a~~~le~aR~~ia~~l----g--~~~~~eI~fts~aTea~n~~~~~l~ 82 (373)
T cd06453 9 SQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI----N--APSPDEIIFTRNTTEAINLVAYGLG 82 (373)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC----C--CCCCCEEEECCCHHHHHHHHHHHHH
T ss_conf 689999999999999975899873050999999999999999999974----9--6998979991886799878865302
Q ss_pred ---CCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf ---322322223333232----2222222222222222222232221033310001221220121135421000012333
Q gi|254780602|r 113 ---NMGDEVLIPRPYWVS----YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNR 185 (400)
Q Consensus 113 ---~~Gd~Vlv~~P~y~~----y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~ 185 (400)
.+||+|++..--++. +....+..|+++..+|.++++ .+|+|+++++++++|+++.++.-+|-||.+.+.
T Consensus 83 ~~~~~gd~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G--~i~~~~l~~~i~~~T~lV~~~~v~n~tG~~~pi-- 158 (373)
T cd06453 83 RANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDG--QLDLEALEKLLTERTKLVAVTHVSNVLGTINPV-- 158 (373)
T ss_pred HCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCH--
T ss_conf 0269999899760111242789999987059589850789788--588999997545895699997856677608879--
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC
Q ss_conf 32111223333320111012211000001223322211123332257414654432234454442211012268753100
Q gi|254780602|r 186 LRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQ 265 (400)
Q Consensus 186 l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~ 265 (400)
++|+++| ++++++++.|-+.+- |.-...+..+ +--+++.|.-|.++-.| +|++...+++...+....
T Consensus 159 -~~I~~~~-~~~g~~~~vDa~Qa~----g~~~idv~~~-----~~D~~~~s~hK~~GP~G--~G~Lyv~~~~~~~l~p~~ 225 (373)
T cd06453 159 -KEIGEIA-HEAGVPVLVDGAQSA----GHMPVDVQDL-----GCDFLAFSGHKMLGPTG--IGVLYGKEELLEEMPPYG 225 (373)
T ss_pred -HHHHHHH-HHCCCEEEEECCCCC----CCCCCCHHHH-----HCCEEEEECHHCCCCCC--EEEEEECCHHHHCCCCCC
T ss_conf -9999999-874976998762124----5546517776-----27738976101158883--499998601452478331
Q ss_pred CCC--------------------CCCCCC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC--
Q ss_conf 122--------------------233222-22222222234676-432222221100000002455304776033027--
Q gi|254780602|r 266 GQQ--------------------TSGACS-IAQWAAVEALNGPQ-DFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD-- 321 (400)
Q Consensus 266 ~~~--------------------~~~~~~-~~q~a~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~-- 321 (400)
... ..+.+. +.-.++.++++.-. .-+++..+...+-.+++.+.|++++|+++..+.
T Consensus 226 ~gg~~~~~~~~~~~~~~~~~~rfe~GT~n~~~i~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~l~~v~i~~~~~~ 305 (373)
T cd06453 226 GGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAED 305 (373)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCC
T ss_conf 68875333234322225552202556755889999999999999848999999999999999999963899762488455
Q ss_pred -CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------CCCCEEEEEEE--CCHHHHHHHHH
Q ss_conf -40899862641023321133224898999999998739799835022--------89972899962--99999999999
Q gi|254780602|r 322 -GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------GHGPSIRISYA--VSDAILEEACV 390 (400)
Q Consensus 322 -g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g~~~~iRis~~--~~~e~l~~al~ 390 (400)
.+...| .+ ...+..++...| +++||.+..|+.+ |.++.||+||+ .++++++..++
T Consensus 306 r~~ivsf-~~------------~~~~~~~v~~~L-~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~ 371 (373)
T cd06453 306 RAGVVSF-NL------------EGIHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVE 371 (373)
T ss_pred CCCEEEE-EE------------CCCCHHHHHHHH-HHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 6888999-96------------995999999999-679929978633244889972899879996888899999999995
Q ss_pred H
Q ss_conf 9
Q gi|254780602|r 391 R 391 (400)
Q Consensus 391 r 391 (400)
.
T Consensus 372 a 372 (373)
T cd06453 372 A 372 (373)
T ss_pred H
T ss_conf 5
No 113
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.90 E-value=8e-24 Score=165.15 Aligned_cols=317 Identities=14% Similarity=0.117 Sum_probs=199.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCC-----------CHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 988999999999998388756998778-----------989999999986421013333-22332334543333222222
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVAG-----------ISPLREAIVEKFRRDNDLHYT-SDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~G-----------~~~lR~aia~~~~~~~g~~~~-~e~I~it~G~~~~l~~~~~~ 110 (400)
-|+|+.|++++.+.+.+. |..+.+ +.+.|+.+|+++ +.. +++|++|+|+++++.+++..
T Consensus 9 t~~~~~Vi~~~~~~~~~~---~~Np~s~h~~~~~a~~~~e~aR~~ia~~l------~a~~~~eIvFTsg~Tea~N~~~~g 79 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDI---YGNPNSLHQFGTATHPAIAEALDKLYKGI------NARDLDDIIITSCATESNNWVLKG 79 (382)
T ss_pred CCCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCEEEEECCHHHHHHHHHHH
T ss_conf 899999999999999866---89963253999999999999999999975------969978699938758999999999
Q ss_pred CC-----CC-CCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 23-----32-23222233---33232222222222222222222223222103331000122122012113542100001
Q gi|254780602|r 111 TV-----NM-GDEVLIPR---PYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVY 181 (400)
Q Consensus 111 ~~-----~~-Gd~Vlv~~---P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~ 181 (400)
+. ++ +|+|++.. |.-.......+..|.++.++|++.++ .+|+++++++++++|++|.++.-||=||.+.
T Consensus 80 l~~~~~~~~~~~~ii~s~~EH~sv~~~~~~l~~~G~~v~~~~~d~~G--~~d~~~l~~~l~~~T~LVai~~anN~tG~i~ 157 (382)
T TIGR03403 80 VYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQG--TITAEQVREAITEKTALVSVMWANNETGMIF 157 (382)
T ss_pred HHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 99998636899999995565153899999999659789997759998--5889999976014660677631476777778
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 23333211122333332011101221100000122332221112333225741465443223445444221101226875
Q gi|254780602|r 182 SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSM 261 (400)
Q Consensus 182 s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l 261 (400)
+.++ |+++| ++++++++.|-+..- +.-+..+..+ +-.+...|.-|.+|..| +|.+...+++ .+
T Consensus 158 pv~~---I~~~~-~~~g~~~~vDa~Q~~----g~~pidv~~l-----~~D~l~~S~HK~~GP~G--iG~L~ir~~~--~l 220 (382)
T TIGR03403 158 PIKE---IGEIC-KERGVLFHTDAVQAI----GKIPVDVQKA-----GVDFLSFSAHKFHGPKG--VGGLYIRKGV--EL 220 (382)
T ss_pred CHHH---HHHHH-HHCCCEEEEEHHHHC----CCCCCCCCCC-----CCCEEEEEHHHCCCCCC--EEEEEECCCC--CC
T ss_conf 7999---99999-872987996713413----5646432323-----46524531010368883--4999986777--65
Q ss_pred HHHC---C---CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC---EEEEEECC
Q ss_conf 3100---1---222332-222222222223467643222222110000000245530477603302740---89986264
Q gi|254780602|r 262 IVLQ---G---QQTSGA-CSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA---FYLYPSCQ 331 (400)
Q Consensus 262 ~~~~---~---~~~~~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~---~y~~~~~~ 331 (400)
.... . ....+. +.+...+..++++...++++......++.++++.+.|++++++.+..+... ..+.+.++
T Consensus 221 ~P~~~Gg~~~~~~r~GT~n~~~i~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~L~~i~~~~i~g~~~~r~p~~~~~~~~ 300 (382)
T TIGR03403 221 TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK 300 (382)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCEEEEECC
T ss_conf 87658987747612798678899999999999999899999999999999999998177946716833258857986279
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC-------------------CCEEEEEEE--CCHHHHHHHHH
Q ss_conf 102332113322489899999999873979983502289-------------------972899962--99999999999
Q gi|254780602|r 332 DLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH-------------------GPSIRISYA--VSDAILEEACV 390 (400)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~-------------------~~~iRis~~--~~~e~l~~al~ 390 (400)
..++..+... |++.||.+..|+.+-. .+.||+||+ +++|+++..++
T Consensus 301 ------------~i~~~~~~~~-L~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~ 367 (382)
T TIGR03403 301 ------------GVEGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIE 367 (382)
T ss_pred ------------CCCHHHHHHH-HCCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHH
T ss_conf ------------9898999998-470997997557728998875899997199854459579997589999999999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998609
Q gi|254780602|r 391 RIKRFCHSLQ 400 (400)
Q Consensus 391 rl~~~l~~l~ 400 (400)
.|++.+++||
T Consensus 368 ~l~~~v~~lr 377 (382)
T TIGR03403 368 VFKKAVQRLR 377 (382)
T ss_pred HHHHHHHHHH
T ss_conf 9999999998
No 114
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=99.89 E-value=2.9e-23 Score=161.75 Aligned_cols=310 Identities=18% Similarity=0.197 Sum_probs=194.3
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCC----C------CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 8899999999999838875699877----8------989999999986421013333223323345433332222222--
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVA----G------ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-- 111 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~----G------~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-- 111 (400)
|+|+.|++++.+.+.+.... +.+. | +.+.|+.+++++ |.. ++++|++|+|+++++.+++..+
T Consensus 10 p~~~~V~~~~~~~~~~~~~n-p~s~~~~~~~~~~~~~e~aR~~ia~~l----ga~-~~~~i~ft~~~Te~~n~~~~~~~~ 83 (371)
T pfam00266 10 QKPQAVLDALQEYYTDYNGN-VHRGVHHLGKEATQAYEEAREKVAEFI----NAP-SDEEIIFTSGTTEAINLVAISLGR 83 (371)
T ss_pred CCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHC----CCC-CCCEEEECCCHHHHHHHHHHHHHH
T ss_conf 89999999999999864888-565214999999999999999999971----939-989799848878998876523453
Q ss_pred -CCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf -33223222233332322----2222222222222222222322210333100012212201211354210000123333
Q gi|254780602|r 112 -VNMGDEVLIPRPYWVSY----PDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRL 186 (400)
Q Consensus 112 -~~~Gd~Vlv~~P~y~~y----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l 186 (400)
..+||+|++..-.|+.- ....+..|+++..++.++++ .+|+++++++++++||++.++.-+|-||.+.+.+
T Consensus 84 ~~~~gd~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g--~i~~~~l~~~i~~~t~lv~~~~v~n~tG~~~pi~-- 159 (371)
T pfam00266 84 RLKPGDEILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNG--LLDLDALEKLLTPRTKLVAITHVSNVTGTVNPVE-- 159 (371)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHCCCCCEEEEEECCCCCCCEECHHH--
T ss_conf 149989999954775523659999876249569993569898--6989999985689964999967667788240555--
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 21112233333201110122110000012233222111233322574146544322344544422110122687531001
Q gi|254780602|r 187 RALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQG 266 (400)
Q Consensus 187 ~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~ 266 (400)
+|+++| +++++++++|-+.+- +.....+..+ ..-+++.|.-|.++-+| +|++...+++.+.+.....
T Consensus 160 -~i~~~~-~~~g~~~~vDa~q~~----g~~~id~~~~-----g~D~~~~s~hK~~GP~G--~G~L~v~~~~~~~l~p~~~ 226 (371)
T pfam00266 160 -EIGKLA-HEYGALVVVDAAQAV----GHRPIDVQAL-----GVDFLAFSGHKLYGPTG--IGVLYGRRDLLEKLPPWKG 226 (371)
T ss_pred -HHHHHH-HHCCCEEEEECCCCC----CCCCCCCCCC-----CCCEEEEECCCCCCCCC--EEEEEECHHHHHHCCCCCC
T ss_conf -699998-636917998751236----7522032324-----36569986555689984--3999981577845787567
Q ss_pred C---------------------CCCCCCCCCC-CCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 2---------------------2233222222-2222223467-643222222110000000245530477603302740
Q gi|254780602|r 267 Q---------------------QTSGACSIAQ-WAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 267 ~---------------------~~~~~~~~~q-~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
. ...+...+.. .++.++++.- +..+++..+..++.++.+.+.|++++++.+..+...
T Consensus 227 g~~~~~~~~~~~~~~~~~~~~~~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~~~~~~i~~~~~~ 306 (371)
T pfam00266 227 GGGMIDLVSLLQETTFADAPSKFEAGTPNIAGIIGLGAALDYLAEIGLEAIEKHERELAAYLYERLLAIPGIRLVPAVAE 306 (371)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99843565422235545614440478998788999999999999819899999999999999999855999899498624
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------CCCCEEEEEEE--CCHHHHH
Q ss_conf 899862641023321133224898999999998739799835022--------89972899962--9999999
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------GHGPSIRISYA--VSDAILE 386 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g~~~~iRis~~--~~~e~l~ 386 (400)
+.+... .......++.++... |.++||.+..|+.+ +.++.||+|++ .++++++
T Consensus 307 -----~~~~iv----sf~~~~~~~~~~~~~-L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId 369 (371)
T pfam00266 307 -----RRPSII----SFNFPGVHPHDVATL-LDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVD 369 (371)
T ss_pred -----CCCCEE----EEEECCCCHHHHHHH-HHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHH
T ss_conf -----668889----999599099999999-734881997640003244487679988999768879999982
No 115
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.88 E-value=4.8e-23 Score=160.41 Aligned_cols=324 Identities=12% Similarity=0.104 Sum_probs=194.4
Q ss_pred CCCHHHHHHHHHHHHCCCC----CCCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC---C
Q ss_conf 8899999999999838875----6998----778989999999986421013333223323345433332222222---3
Q gi|254780602|r 44 DMPENVKYAVVRAMERGET----KYTA----VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT---V 112 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~----~Y~~----~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~---~ 112 (400)
++|+.+.+++.+.+.+... .|.. ..=+.+.|+.+|+++ | .++++|++|+|+++++..++..+ .
T Consensus 10 ~~~~~V~~a~~~~~~~~~~np~~~h~~~~~a~~~~e~aR~~iA~~l----g--a~~~eIvFt~~~T~a~n~~i~~~~~~~ 83 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLL----G--AEPDEIIFTSGGTESDNTAIKSALAAQ 83 (379)
T ss_pred CCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH----C--CCCCCEEEECCHHHHHHHHHHHHHHHC
T ss_conf 8999999999999996589977658999999999999999999982----9--996739992887999999999999867
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 32232222333323222---222222222222222222322210333100012212201211354210000123333211
Q gi|254780602|r 113 NMGDEVLIPRPYWVSYP---DMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRAL 189 (400)
Q Consensus 113 ~~Gd~Vlv~~P~y~~y~---~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i 189 (400)
.+||+|++..-.++... ..++..|.++..+|+++++ .+|+++++++++++||++.++.-+|-||.+.+.++ |
T Consensus 84 ~~~d~Ii~s~~eH~a~~~~~~~l~~~g~~v~~~~~~~~g--~id~~~l~~~l~~~T~lvs~~~~sn~tG~i~pv~~---I 158 (379)
T TIGR03402 84 PEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEG--RLDLEELRAAITDDTALVSVMWANNETGTIFPIEE---I 158 (379)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHCCCEEEEEECCCCC--CCCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH---H
T ss_conf 999999980131045667999999659889997037898--26426678872678628996125788870178999---9
Q ss_pred CCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH-HHHHHHH-CCC
Q ss_conf 12233333201110122110000012233222111233322574146544322344544422110122-6875310-012
Q gi|254780602|r 190 ADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL-IKSMIVL-QGQ 267 (400)
Q Consensus 190 ~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l-i~~l~~~-~~~ 267 (400)
+++| +++++++++|-+..- +..+..+..+ +--++..|.-|.+|-.| +|.+...+++ ++.+..- .+.
T Consensus 159 ~~~~-~~~g~~~~vDa~Q~~----g~~pidv~~~-----~~D~~~~S~hK~~GP~G--~G~Ly~r~~~~~~P~~~Gg~~e 226 (379)
T TIGR03402 159 GEIA-KERGALFHTDAVQAV----GKIPIDLKEM-----NIDMLSLSGHKLHGPKG--VGALYIRKGTRFRPLLRGGHQE 226 (379)
T ss_pred HHHH-HHCCCEEEEECCCCC----CCCCCCHHHH-----CCCCEECCHHHCCCCCC--EEEEEECCCCCCCCCCCCCCCC
T ss_conf 9999-763988994531124----6646403441-----57721202111368872--5999982676668767888877
Q ss_pred --CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf --22332-222222222223467643222222110000000245-53047760330274089986264102332113322
Q gi|254780602|r 268 --QTSGA-CSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQ-LQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDV 343 (400)
Q Consensus 268 --~~~~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~-L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~ 343 (400)
...+. +.+.-.+...+++-....++......+..++.+.+. |+.++++.+.-|... +++.... ....
T Consensus 227 ~~~~~GT~n~~~i~gl~~a~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~~~i~g~~~~-----r~p~~~~----~~~~ 297 (379)
T TIGR03402 227 RGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTK-----RLPNTVN----ISFE 297 (379)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHH-----CCCCCEE----ECCC
T ss_conf 776789712999999999999999759999999999999999999850898275478666-----4887303----2369
Q ss_pred CCCHHHHHHHHHHHCCEEEECCCCCCC-------------------CCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
Q ss_conf 489899999999873979983502289-------------------972899962--999999999999999998609
Q gi|254780602|r 344 IRTDLDFVNGLLEIEKVAVVQGSSFGH-------------------GPSIRISYA--VSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 344 ~~~~~~~~~~Ll~~~gV~v~pG~~Fg~-------------------~~~iRis~~--~~~e~l~~al~rl~~~l~~l~ 400 (400)
..+...+.. +|+++||.+..|+.+.. .|.||+|++ .++++++..++.|++.++.||
T Consensus 298 ~~~~~~i~~-~L~~~gI~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL~~iv~~lr 374 (379)
T TIGR03402 298 YIEGEAILL-LLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CCCHHHHHH-HHCCCCEEEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 989999999-84518929975032159998624999975998333395699973899999999999999999999998
No 116
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=3e-22 Score=155.62 Aligned_cols=329 Identities=19% Similarity=0.203 Sum_probs=215.4
Q ss_pred CCCEEECCCCCCCCCCCHHHHHHHHHHHHC---CCC--CCCCCC----CCHHHHHHHHHHHHHHCCCCCC-CCCCCCCCC
Q ss_conf 997266565897498899999999999838---875--699877----8989999999986421013333-223323345
Q gi|254780602|r 30 GIDVLCLTAGEPDFDMPENVKYAVVRAMER---GET--KYTAVA----GISPLREAIVEKFRRDNDLHYT-SDQIIVGTG 99 (400)
Q Consensus 30 g~~ii~l~~G~p~~~~p~~i~~a~~~al~~---~~~--~Y~~~~----G~~~lR~aia~~~~~~~g~~~~-~e~I~it~G 99 (400)
|++++.|-.+-... .|..+.+++.+.... ..+ .|.... -..+.|++++++++ .+ .++|++|.|
T Consensus 20 ~~~~vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~------a~~~~eIvft~~ 92 (405)
T COG0520 20 GKPLVYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLN------ADSSDEIVFTRG 92 (405)
T ss_pred CCCCEECCCCCCCC-CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC------CCCCCEEEEECC
T ss_conf 67847636765666-78899999999999740245755441279999999999999999819------998772999598
Q ss_pred CCCCCCCCCCCC---CCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECC
Q ss_conf 433332222222---332232222333323----2222222222222222222223222103331000122122012113
Q gi|254780602|r 100 AKHVIFNALMAT---VNMGDEVLIPRPYWV----SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNS 172 (400)
Q Consensus 100 ~~~~l~~~~~~~---~~~Gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~n 172 (400)
++++|.++..++ ..+||+|++..--++ .+....+..|++++.+|+++++ .++.|+++..++++||++.++.
T Consensus 93 tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g--~~~~d~~~~~i~~~Tklvais~ 170 (405)
T COG0520 93 TTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDG--LLDLDALEKLITPKTKLVALSH 170 (405)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCC--CCCHHHHHHHCCCCCEEEEEEC
T ss_conf 37999999997024106899899804655200899999998759689998418999--7288999864699944999966
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC-CCCCCCCCCCCC
Q ss_conf 5421000012333321112233333201110122110000012233222111233322574146544-322344544422
Q gi|254780602|r 173 PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK-AYAMTGLRIGYA 251 (400)
Q Consensus 173 P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK-~~~~~G~RiG~~ 251 (400)
-+|-||.+.+ +++|+++| +++++++++|-+.+- +.....+.. .+.-+++.|.-| .+|-+| +|.+
T Consensus 171 vSn~tG~~~p---v~~I~~la-~~~ga~v~VDaaq~~----~h~~idv~~-----l~~Df~afsgHKwl~gP~G--iGvL 235 (405)
T COG0520 171 VSNVTGTVNP---VKEIAELA-HEHGALVLVDAAQAA----GHLPIDVQE-----LGCDFLAFSGHKWLLGPTG--IGVL 235 (405)
T ss_pred CCCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCCC----CCCCCCHHH-----CCCCEEEECCCCCCCCCCC--EEEE
T ss_conf 4167554040---99999999-984998999771334----756688556-----1898999767432579985--2999
Q ss_pred CCHHHHHHHHHHHCCC---------------------CCCCCCCCCCCCC-CCCCCCCCC-CCCCCCCCCCCCCCCHHHH
Q ss_conf 1101226875310012---------------------2233222222222-222346764-3222222110000000245
Q gi|254780602|r 252 AGALSLIKSMIVLQGQ---------------------QTSGACSIAQWAA-VEALNGPQD-FVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 252 v~~~~li~~l~~~~~~---------------------~~~~~~~~~q~a~-~~~l~~~~~-~~~~~~~~~~~~r~~~~~~ 308 (400)
.+.+++++.+.-.... ...+.+.+.+..+ .++++..++ -++++.+.-++..+++.+.
T Consensus 236 y~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~ 315 (405)
T COG0520 236 YVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEG 315 (405)
T ss_pred EECHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98665584378977788724401445553015641531557843788986999999999857999999999999999999
Q ss_pred HHCCCCCEEEECC----CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--------CCCEEEE
Q ss_conf 5304776033027----408998626410233211332248989999999987397998350228--------9972899
Q gi|254780602|r 309 LQGVPGIRYMIPD----GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--------HGPSIRI 376 (400)
Q Consensus 309 L~~~~g~~~~~p~----g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--------~~~~iRi 376 (400)
|++++++++..|. ++.+.| .+. ..+..+.+..| .+.||++.-|.... .+..+|+
T Consensus 316 L~~~~~v~i~g~~~~~r~~~vsF-~v~------------~~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~iR~ 381 (405)
T COG0520 316 LSELPGVEIYGPPDADRGGIVSF-NVK------------GIHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATIRA 381 (405)
T ss_pred HHCCCCEEEECCCCCCCCCEEEE-EEC------------CCCHHHHHHHH-HHCCEEEEECCCCCHHHHHHCCCCCCEEE
T ss_conf 85489849964663467746999-978------------95989999999-86786998256443267875377775799
Q ss_pred EEE--CCHHHHHHHHHHHHHHH
Q ss_conf 962--99999999999999999
Q gi|254780602|r 377 SYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 377 s~~--~~~e~l~~al~rl~~~l 396 (400)
||+ .+.|+++.-++.|+++.
T Consensus 382 S~~~YNt~edid~l~~aL~~~~ 403 (405)
T COG0520 382 SLHLYNTEEDVDRLLEALKKAL 403 (405)
T ss_pred EEECCCCHHHHHHHHHHHHHHH
T ss_conf 9742599999999999999874
No 117
>PRK02948 cysteine desulfurase; Provisional
Probab=99.88 E-value=7.3e-23 Score=159.33 Aligned_cols=324 Identities=13% Similarity=0.091 Sum_probs=188.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCC----CCC----CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC---
Q ss_conf 988999999999998388756----998----778989999999986421013333223323345433332222222---
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETK----YTA----VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT--- 111 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~----Y~~----~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~--- 111 (400)
-|+|+.+.+++.+.+.+.... |.. ..=+.+.|+.||+++ | .++++|++|+|+++++.+++..+
T Consensus 10 tp~~~~v~~a~~~~~~~~~~N~~s~h~~~~~a~~~~e~aR~~ia~~l----g--a~~~~IvFTsg~Tes~nlai~~~~~~ 83 (381)
T PRK02948 10 TPMSEEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI----G--GKEQGVYFTSGGTESNYLAIQSLLNA 83 (381)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHC----C--CCCCCEEEECCHHHHHHHHHHHHHHH
T ss_conf 99999999999999987068985141799999999999999999980----9--99780899288769999999999997
Q ss_pred -CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf -33223222233---33232222222222222222222223222103331000122122012113542100001233332
Q gi|254780602|r 112 -VNMGDEVLIPR---PYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLR 187 (400)
Q Consensus 112 -~~~Gd~Vlv~~---P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~ 187 (400)
..+||+|++.. ++-......++..|.++..+|+++++ .+|+++|+++++++|+++.++.-||=||.+.+.+
T Consensus 84 ~~~~g~~ii~s~~EH~sv~~~~~~l~~~G~~v~~i~~d~~G--~id~~~l~~~l~~~t~LV~v~~asN~tG~i~pi~--- 158 (381)
T PRK02948 84 LPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKSG--LIRLVDLERAITEDTVLASIQHANSEIGTIQPIA--- 158 (381)
T ss_pred HCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHCCCCCEEEEEECEEECCCCCCCHH---
T ss_conf 05799989974642200789999999729989996778888--7699999975689946999975020686477588---
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHC-
Q ss_conf 1112233333201110122110000012233222111233322574146544322344544422110122-68753100-
Q gi|254780602|r 188 ALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL-IKSMIVLQ- 265 (400)
Q Consensus 188 ~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l-i~~l~~~~- 265 (400)
+|.++| +++++++++|-+-. + +..+..+..+ +.-++..|..|.+|..| +|.+...+++ .+.+..-.
T Consensus 159 ~I~~~a-~~~g~~~~vDa~Q~-~---g~~~idv~~l-----~~D~~~fS~HK~~GP~G--iG~L~~~~~~~~~~~~~g~~ 226 (381)
T PRK02948 159 EIGALL-KKYNVLFHSDCVQT-F---GKLPIDVFEM-----GIDSLSVSAHKIYGPKG--VGAVYINPQVRWKPVFPGTS 226 (381)
T ss_pred HHHHHH-HHHCCEEEEEHHHH-C---CCCCCCCCCC-----CCCEEEEEHHCCCCCCC--EEEEEECCCCCCCCCCCCCC
T ss_conf 999999-87098798465661-4---6516653446-----77625620000458872--59999878986555668988
Q ss_pred -CC-CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-CCEEEECCCCEEEEEECCCCCCCCCCCC
Q ss_conf -12-22332-22222222222346764322222211000000024553047-7603302740899862641023321133
Q gi|254780602|r 266 -GQ-QTSGA-CSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVP-GIRYMIPDGAFYLYPSCQDLIGKKSPSG 341 (400)
Q Consensus 266 -~~-~~~~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-g~~~~~p~g~~y~~~~~~~~~~~~~~~~ 341 (400)
.. ...+. +.+...+..++++.....++.....+++-++++.+.|+.++ .+.+....+- .++..... .
T Consensus 227 ~e~~~~~GT~nv~gi~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~-----~~p~i~~~----~ 297 (381)
T PRK02948 227 HEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTS-----CLPHIIGV----T 297 (381)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCC-----CCCCEEEE----E
T ss_conf 78976678675999999999999998649999999999999999998547997465688634-----56867887----3
Q ss_pred CCCCCHHHHHHHHHHHCCEEEECCCCC--------------CC-----CCEEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 224898999999998739799835022--------------89-----972899962--99999999999999999860
Q gi|254780602|r 342 DVIRTDLDFVNGLLEIEKVAVVQGSSF--------------GH-----GPSIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 342 ~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------------g~-----~~~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
....+.... ...|+++||.+..|+.+ |. .+.||+||+ ++.|+++..++.|++..+..
T Consensus 298 ~~~~~~~~~-~~~l~~~gI~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~~~f 375 (381)
T PRK02948 298 IKGFEGQYT-MLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CCCCCHHHH-HHHCCCCCCEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 388688999-985421681897804527898870089997599878809259997479999999999999999999998
No 118
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.88 E-value=7.7e-22 Score=153.09 Aligned_cols=334 Identities=17% Similarity=0.110 Sum_probs=199.7
Q ss_pred HCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCC---CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589-7498899999999999838875699877---89899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTAVA---GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~~~---G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
-+|+++|+|+..+ -++...|.++++..++++.-.++.+.++ |..++-+.+-+.+.+.+|. ++-+++++| ..+
T Consensus 36 i~gr~~lnFsSndYLGL~~hp~v~~a~~~a~~~yG~g~~~SRl~~G~~~~h~~LE~~lA~~~g~---e~allf~SG-y~A 111 (387)
T PRK05958 36 VDGRRMLNFASNDYLGLANHPELIAAAQQAARRYGVGSGGSRLVTGNSPAHEALEAELAEWFGA---ERALLFSSG-YAA 111 (387)
T ss_pred ECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHCC---CCEEEECCC-HHH
T ss_conf 8997999856654247789999999999999983898865632306869999999999998689---967964552-386
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC--CCCEEECCCCCCCCCCC
Q ss_conf 3222222233223222233332322222222222222222222232221033310001221--22012113542100001
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK--TKWLFLNSPSNPSGVVY 181 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~k~i~l~nP~NPTG~v~ 181 (400)
...++.++++++|.|++..-.-.....-+++.+++++.++ +-|+++|++.+... .+.++++. .+|
T Consensus 112 n~~~i~al~~~~d~ii~D~~~HaSi~dG~~ls~a~~~~f~-------HnD~~~Le~~L~~~~~~~~~iv~e------gvy 178 (387)
T PRK05958 112 NLAVLTALVGKGDLIVSDKLNHASLIDGARLSRAEVRRYP-------HNDVDALEALLAKWRAGRALIVTE------SVF 178 (387)
T ss_pred HHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHCCCCCEEEEEC------CCC
T ss_conf 6656653278997899710046989998872799289968-------999999999997388987599974------665
Q ss_pred C----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 2----333321112233333201110122110000012233222111233322574146544322344544422110122
Q gi|254780602|r 182 S----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL 257 (400)
Q Consensus 182 s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l 257 (400)
| ...+.+|+++| ++++++++.||+|+.-+++. ....+........+..|.++||||.|+..| ||+++++++
T Consensus 179 SMdGd~apL~~i~~L~-~~y~~~L~vDeAH~~Gv~G~-~G~G~~e~~~~~~~vdi~~gTlsKA~gs~G---G~i~g~~~~ 253 (387)
T PRK05958 179 SMDGDLAPLAELVALA-RRHGAWLLVDEAHGTGVLGP-QGRGLAEAAGLAGEIVILVGTLGKALGSSG---AAVLGSETL 253 (387)
T ss_pred CCCCCCCCHHHHHHHH-HHCCEEEEECCHHHCCCCCC-CCCCHHHHHCCCCCCEEEECCCCCCCCCCC---EEEEECHHH
T ss_conf 7788766899999999-97084788426222263379-998489984788886899760544456774---399507899
Q ss_pred HHHHHHH-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCC
Q ss_conf 6875310-01222332222222-222223467643222222110000000245530477603302740899862641023
Q gi|254780602|r 258 IKSMIVL-QGQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIG 335 (400)
Q Consensus 258 i~~l~~~-~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~ 335 (400)
++.+... +.+..+...+|.+. ++.++|+--++ -.+.++.+.++.+++.+.|++. |+.+...+.. -+-+-+.+
T Consensus 254 i~~l~~~a~~~ifStalpP~~~aa~~~al~~i~~-~~~~~~~L~~n~~~~~~~l~~~-g~~~~~s~sp-Iipi~ig~--- 327 (387)
T PRK05958 254 IDYLINRARPFIFTTALPPAQAAAARAALRILRE-EPERRERLAALIARLRAGLRAL-GLGLPDSESA-IQPLIVGD--- 327 (387)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCC-EEEEEECC---
T ss_conf 9999873902031588877999999999999860-9599999999999998645753-9985899998-79999699---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCC--EEEEEEE--CCHHHHHHHHHHHHHHHHH
Q ss_conf 3211332248989999999987397998350228-997--2899962--9999999999999999986
Q gi|254780602|r 336 KKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGP--SIRISYA--VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~--~iRis~~--~~~e~l~~al~rl~~~l~~ 398 (400)
.....++++.|+ +.||.+.|...=. +.+ -+|+++. .+++++++.++.|++.++.
T Consensus 328 --------~~~~~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~e~~~~ 386 (387)
T PRK05958 328 --------NERALALAAALQ-AQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEALAA 386 (387)
T ss_pred --------HHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------999999999999-77952831789988999844999978779999999999999999950
No 119
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.86 E-value=8.9e-21 Score=146.61 Aligned_cols=326 Identities=18% Similarity=0.142 Sum_probs=191.5
Q ss_pred CCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCCC---CCH----HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9726656589-7498899999999999838875699877---898----9999999986421013333223323345433
Q gi|254780602|r 31 IDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTAVA---GIS----PLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 31 ~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~~~---G~~----~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+++++|+.-+ -++...|.++++..+++++-.++++.++ |.. +|-+.+|+++ |. |..++.+.+..
T Consensus 1 r~~l~f~s~dYLgL~~~p~~~~a~~~a~~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~----g~----e~al~~~sG~~ 72 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----GK----EAALVFSSGYA 72 (349)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----CC----CEEEEECCHHH
T ss_conf 95899766632478989999999999999739988876736478799999999999986----99----81999557078
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC---C-CCCEEECCC-CCCC
Q ss_conf 3322222223322322223333232222222222222222222223222103331000122---1-220121135-4210
Q gi|254780602|r 103 VIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP---K-TKWLFLNSP-SNPS 177 (400)
Q Consensus 103 ~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~-~k~i~l~nP-~NPT 177 (400)
+...++.+++.+||.|++..-.-......+++.+++++.++ +-|+++|++.+++ + .+.++++.. .+=+
T Consensus 73 an~~~i~~l~~~~d~i~~D~~~H~si~~G~~~s~a~~~~f~-------Hnd~~~L~~~l~~~~~~~~~~~iv~egv~Sm~ 145 (349)
T cd06454 73 ANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFK-------HNDMEDLEKLLREARRPYGKKLIVTEGVYSMD 145 (349)
T ss_pred HHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEEC-------CCCHHHHHHHHHHHHCCCCCEEEEECCCCCCC
T ss_conf 77888862057897797415343728863652446479978-------99999999999853225897699965767888
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 00012333321112233333201110122110000012233222111233322574146544322344544422110122
Q gi|254780602|r 178 GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL 257 (400)
Q Consensus 178 G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l 257 (400)
|.+.+ +++|.++| ++++++++.||+|+.-+++ .....+........+..+++.||||.|+..| |++.+++++
T Consensus 146 Gd~ap---L~~l~~l~-~~~~~~livDeAH~~Gv~G-~~G~G~~~~~~~~~~~di~~~tlsKa~G~~G---g~v~g~~~~ 217 (349)
T cd06454 146 GDIAP---LPELVDLA-KKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSKEL 217 (349)
T ss_pred CCCCC---HHHHHHHH-HHHCCEEEEECHHHCCCCC-CCCCCHHHHCCCCCCCEEEECCCCCCCCCCC---CEEECCHHH
T ss_conf 77679---89999999-9829789972323317415-8887678865898866799853654346777---124253568
Q ss_pred HHHHHHHC-CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCC
Q ss_conf 68753100-12223322222-22222223467643222222110000000245530477603302740899862641023
Q gi|254780602|r 258 IKSMIVLQ-GQQTSGACSIA-QWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIG 335 (400)
Q Consensus 258 i~~l~~~~-~~~~~~~~~~~-q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~ 335 (400)
++.+.... .+..+...++. -.++.++|+.-++ ..+.++.++++.+++.+.|++. |+.+.....+--..+-..
T Consensus 218 i~~l~~~~~~~i~s~~l~p~~~aa~~~al~~l~~-~~~~~~~L~~~~~~~~~~l~~~-g~~i~~~~~~~i~~~~~~---- 291 (349)
T cd06454 218 IDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG-GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGD---- 291 (349)
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCEEEEECC----
T ss_conf 9999861988577777689999999999999863-9588999999999999999976-997579999727999869----
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--C--CCEEEEEEE--CCHHHHHHHHHHHHH
Q ss_conf 3211332248989999999987397998350228--9--972899962--999999999999999
Q gi|254780602|r 336 KKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--H--GPSIRISYA--VSDAILEEACVRIKR 394 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~--~~~iRis~~--~~~e~l~~al~rl~~ 394 (400)
......+++++|+ ++||.+.|.. |- + ..-+|+++. .++|++++.++-|++
T Consensus 292 -------~~~~a~~~~~~L~-~~Gi~v~~~~-~Ptvp~~~~~lRi~~sa~ht~edId~li~~l~e 347 (349)
T cd06454 292 -------DPAKAVAFSDALL-ERGIYVQAIR-YPTVPRGTARLRISLSAAHTKEDIDRLLEALKE 347 (349)
T ss_pred -------CHHHHHHHHHHHH-HCCCEEEEEC-CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf -------9999999999998-8796286379-897899983599986877999999999999997
No 120
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.84 E-value=1.1e-20 Score=146.06 Aligned_cols=314 Identities=16% Similarity=0.185 Sum_probs=197.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCC--CCCCC-------CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 589749889999999999983887--56998-------778989999999986421013333223323345433332222
Q gi|254780602|r 38 AGEPDFDMPENVKYAVVRAMERGE--TKYTA-------VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNAL 108 (400)
Q Consensus 38 ~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~-------~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~ 108 (400)
.+--.||=|++|.++|.+.++... .+|+. +.-..|+|+.||+.++ .+ ++.+|++|+.++.||..++
T Consensus 5 nAATtyPKP~ev~~a~~~~~~~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~----~~-~~~~v~Ft~nAT~aLN~~L 79 (384)
T TIGR01977 5 NAATTYPKPDEVYEAMADFLKNYGGSPGRGRYRLALRASREVEETRELLAKLFN----AP-SKAHVVFTNNATTALNIAL 79 (384)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHC----CC-CCCCEEEECCHHHHHHHHH
T ss_conf 665689973899999999987348756888750345414228899999999848----89-7462784060779999998
Q ss_pred CC-CCC--CCCCCCCCCCCCCCCCCC-------CCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCC-CCCEEECCCCCC
Q ss_conf 22-233--223222233332322222-------2222-22222222222232221033310001221-220121135421
Q gi|254780602|r 109 MA-TVN--MGDEVLIPRPYWVSYPDM-------VALC-GGIPVFVDTQQDDNFQVSPEKLEQAITPK-TKWLFLNSPSNP 176 (400)
Q Consensus 109 ~~-~~~--~Gd~Vlv~~P~y~~y~~~-------~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~k~i~l~nP~NP 176 (400)
+. ++. +||.|++.. ..|-+. .+.. |.++-.+++++++ .+|+|+|+++++.+ ||++++++-+|=
T Consensus 80 ~Gl~lknr~g~hVi~t~---mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G--~~~~e~i~~~~~~~kTk~iv~~HaSNV 154 (384)
T TIGR01977 80 KGLILKNREGDHVITTP---MEHNSVLRPLEKLKEERIGVEITIVKCDNEG--LISPERIKRAIKKNKTKLIVVSHASNV 154 (384)
T ss_pred HCCCCCCCCCCCEEECC---CCHHHHHHHHHHHHHCCCCEEEEEECCCCCC--CCCHHHHHHHCCCCCCCEEEEECHHHH
T ss_conf 43300055999678647---6023664389999735997589986278885--216799998533788300432200301
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCE--EEEECCCCCCC-CCCCCCCCCC
Q ss_conf 00001233332111-22333332011101221-10000012233222111233322--57414654432-2344544422
Q gi|254780602|r 177 SGVVYSQNRLRALA-DVLVRNPHVHIISDDIY-EHIVYRNCQFSNIVNVEPSLYER--TLVVNGVSKAY-AMTGLRIGYA 251 (400)
Q Consensus 177 TG~v~s~~~l~~i~-~~~a~~~~i~ii~De~Y-~~l~~~~~~~~s~~~~~~~~~~~--~i~~~S~SK~~-~~~G~RiG~~ 251 (400)
||.+++-|| |. ++ |+++++.+|.|.+= ..+ ..+ ++.+. -+..++-.|++ |..| +|-+
T Consensus 155 ~G~ilpiEE---IgR~l-A~e~g~~~~~DAaQtAGv----------~~I--d~~~~~i~~lAF~GHKgLlGP~G--tGGl 216 (384)
T TIGR01977 155 TGTILPIEE---IGREL-AKENGIFFILDAAQTAGV----------IPI--DMEELAIDMLAFTGHKGLLGPQG--TGGL 216 (384)
T ss_pred CCCCCCHHH---HHHHH-HHHCCCEEEEECCCCCCC----------CHH--CCCHHHCCEEEECCCHHHHCCCC--CEEE
T ss_conf 031125789---99999-986797399832000375----------410--10322067676377522001136--3157
Q ss_pred CCHHHHHHHHHHHCCC---------------------CCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCH
Q ss_conf 1101226875310012---------------------2233222222222222346764322222-----2110000000
Q gi|254780602|r 252 AGALSLIKSMIVLQGQ---------------------QTSGACSIAQWAAVEALNGPQDFVVNNR-----KIFEYRRDLC 305 (400)
Q Consensus 252 v~~~~li~~l~~~~~~---------------------~~~~~~~~~q~a~~~~l~~~~~~~~~~~-----~~~~~~r~~~ 305 (400)
...+..-+.+..+..- .+.+.+ ++..|...-.|+.+.+ +.=...++.+
T Consensus 217 ~~~e~~~~~l~pl~~GGTGs~S~~~~~P~~~PdrfE~GTLN~p------GI~gL~agik~~~~~gi~~i~~kE~~l~~~l 290 (384)
T TIGR01977 217 IIKEGIKEILKPLKSGGTGSHSALIDQPSELPDRFESGTLNTP------GIAGLNAGIKFIEKIGIANIAKKELKLTEKL 290 (384)
T ss_pred EEECCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8873705674532068875453444577604320114400379------9999988878875644778999999999999
Q ss_pred HHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------C--CCCEEE
Q ss_conf 245530477603302740899862641023321133224898999999998739799835022--------8--997289
Q gi|254780602|r 306 VAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------G--HGPSIR 375 (400)
Q Consensus 306 ~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------g--~~~~iR 375 (400)
.+.|++.+.+++.-|+ |..+... ..-......|+.+.+..|-++.+|+++.|-.+ | ..|-||
T Consensus 291 ~~~L~~~~~V~iyG~~-------d~~~~~~-vvSf~~~g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt~R 362 (384)
T TIGR01977 291 LNGLKEIKKVKIYGPK-------DPAKRVG-VVSFTVEGIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGTIR 362 (384)
T ss_pred HHHCCCCCCEEEECCC-------CHHHCCC-EEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCEEE
T ss_conf 8740167806762770-------3433267-5899834888778999998618918976766641230353116765388
Q ss_pred EEEE--CCHHHHHHHHHHHH
Q ss_conf 9962--99999999999999
Q gi|254780602|r 376 ISYA--VSDAILEEACVRIK 393 (400)
Q Consensus 376 is~~--~~~e~l~~al~rl~ 393 (400)
+|++ .++|+++..++.|.
T Consensus 363 ~S~gyFnt~ee~~~l~~al~ 382 (384)
T TIGR01977 363 LSLGYFNTEEEIEKLVEALS 382 (384)
T ss_pred EECCCCCCHHHHHHHHHHHH
T ss_conf 72787788899999999985
No 121
>PRK07179 hypothetical protein; Provisional
Probab=99.84 E-value=2e-20 Score=144.49 Aligned_cols=330 Identities=12% Similarity=0.067 Sum_probs=196.9
Q ss_pred HCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCC---CCC----CHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 8699726656589-74988999999999998388756998---778----989999999986421013333223323345
Q gi|254780602|r 28 SKGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTA---VAG----ISPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 28 ~~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G----~~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
..|+++|+|+..+ -++.-.|.|++|..+++++-..+.+. ..| +.+|-+++|+|+.. ++-+++++
T Consensus 51 ~~G~~~i~fsSNdYLGLs~hp~v~~a~~~ai~~~G~g~~~Srl~~G~~~~h~~LE~~LA~~~g~-------e~allf~S- 122 (408)
T PRK07179 51 TPGPDAIILQSNDYLNLSGHPDIIKAQIAALQEYGDGLVMSAVFLHDDSPKPQFEKKLAAFTGF-------ESGLLCQS- 122 (408)
T ss_pred CCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-------CCEEEECC-
T ss_conf 8997356857666347889999999999999984999874680316758999999999998689-------92999875-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCC
Q ss_conf 43333222222233223222233332322222222222222222222232221033310001221220121135421000
Q gi|254780602|r 100 AKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGV 179 (400)
Q Consensus 100 ~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~ 179 (400)
+-.+...++.++++++|.|++-.-.-.....-+++.|++.+.++ +-|+++|++.+....+.++++ =.
T Consensus 123 Gy~AN~g~i~aL~~~~d~I~~D~~~HaSi~dG~rls~a~~~~f~-------HND~~~Le~~L~~~~~~iIv~------eg 189 (408)
T PRK07179 123 GWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFR-------HNDVDHLRRQIERHGPGIIVV------DS 189 (408)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHCCCCEEEE------EE
T ss_conf 38999999999679998899988778889876761488579947-------999999999998469977999------74
Q ss_pred CCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 012----333321112233333201110122110000012233222111233-322574146544322344544422110
Q gi|254780602|r 180 VYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSL-YERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 180 v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~-~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
||| ...+.+|+++ +++++.+++.||+|+.=+++. ....+.... ++ .+..|.++||||+|+..| ||++++
T Consensus 190 VfSMdGDiapL~~l~~l-a~~y~a~L~VDEAH~~Gv~G~-~G~G~~~~~-gl~~~vdi~~gTlsKA~G~~G---Gfi~gs 263 (408)
T PRK07179 190 VYSTTGTIAPLVDIVDI-AEEFGCVLVVDESHSLGTHGP-QGAGLVAEL-GLTSRVHFITASLAKAFAGRA---GIITCP 263 (408)
T ss_pred CCCCCCCCCCHHHHHHH-HHHHCEEEEEECCCEEEEECC-CCCCHHHHC-CCCCCCEEEEEEHHHHHHHCC---CCEECC
T ss_conf 23578876689999999-987267988614350523679-998779984-998787289937178676376---634237
Q ss_pred HHHHHHHHHHC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCC
Q ss_conf 12268753100-12223322222222-22223467643222222110000000245530477603302740899862641
Q gi|254780602|r 255 LSLIKSMIVLQ-GQQTSGACSIAQWA-AVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQD 332 (400)
Q Consensus 255 ~~li~~l~~~~-~~~~~~~~~~~q~a-~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~ 332 (400)
+++++-+.... .+..+...+|.+.+ +.++++--++ -.+.|+.+.++.+++.+.|+++ |+.+..++.-. +-+-+.+
T Consensus 264 ~~~id~L~~~ar~~IfStal~P~~~aa~~aal~ii~~-~~~~r~~L~~n~~~~r~~L~~~-G~~i~~s~spI-vpi~~G~ 340 (408)
T PRK07179 264 AELAEYFPFVSYPAIFSSTLLPHEIAGLEATLEVIES-ADERRARLHANARFLREGLSEL-GYNIRSSESQI-IALETGS 340 (408)
T ss_pred HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCE-EEEECCC
T ss_conf 9999999971877455666789999999999999862-9999999999999999999837-99978999997-9998599
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CC--CEEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 0233211332248989999999987397998350228-99--72899962--99999999999999999860
Q gi|254780602|r 333 LIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HG--PSIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~--~~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
......+.+. |.+.|+.+.+-..=- +. .-+|+++. .++++++..++.|++.-+.+
T Consensus 341 -----------~~~a~~~~~~-L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~ 400 (408)
T PRK07179 341 -----------ERNTEVLRDA-LEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEV 400 (408)
T ss_pred -----------HHHHHHHHHH-HHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf -----------9999999999-99789628416799899998169987487799999999999999999980
No 122
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=5.3e-20 Score=141.89 Aligned_cols=330 Identities=15% Similarity=0.127 Sum_probs=193.1
Q ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCH----HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 699726656589-74988999999999998388756998---77898----99999999864210133332233233454
Q gi|254780602|r 29 KGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTA---VAGIS----PLREAIVEKFRRDNDLHYTSDQIIVGTGA 100 (400)
Q Consensus 29 ~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~----~lR~aia~~~~~~~g~~~~~e~I~it~G~ 100 (400)
+|+++++|+..+ -++.-.|.+++++.+++++--++-+. ..|.. +|-+.+|+|+ |. ++-+++.+|
T Consensus 44 ~g~~~l~f~SNdYLGLs~~p~v~~a~~~a~~~yG~gs~gSrl~~G~~~~h~~LE~~LA~f~----g~---e~allf~SG- 115 (410)
T PRK13392 44 TGKRVTIWCSNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHEHVLLERELADLH----GK---QSALLFTSG- 115 (410)
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH----CC---CCEEEECCH-
T ss_conf 9938989775666577899999999999999809998775856278799999999999986----99---929997664-
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC----CCCCEEECCCC
Q ss_conf 3333222222233--22322223333232222222222222222222223222103331000122----12201211354
Q gi|254780602|r 101 KHVIFNALMATVN--MGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP----KTKWLFLNSPS 174 (400)
Q Consensus 101 ~~~l~~~~~~~~~--~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~k~i~l~nP~ 174 (400)
..+...++.++++ |+|.|+.-.-.-.....-+++.|++.+.++ +-|+++|++.+.. ++++|+.
T Consensus 116 y~AN~g~i~aL~~~~~~d~i~~D~l~HaSiidG~rlS~a~~~~f~-------HnD~~~Le~~L~~~~~~~~~~Ivt---- 184 (410)
T PRK13392 116 YVSNDAALSTLARLLPNCLILSDALNHASMIEGIRRSGAEKQVWA-------HNDLADLERQLASVDPDRPKLICF---- 184 (410)
T ss_pred HHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHCCCCCCEEEEE----
T ss_conf 788899999982779997999873122889987875589589971-------899899999997566678559997----
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 21000012----33332111223333320111012211000001223322211123332257414654432234454442
Q gi|254780602|r 175 NPSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGY 250 (400)
Q Consensus 175 NPTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 250 (400)
=.||| ...+.+|+++| ++|+.+++.||+|+.=+++. ....+.....-..+..|.++||||+|+..| ||
T Consensus 185 ---EgVfSMdGd~apL~~l~~L~-~~y~a~L~VDeAH~~GvlG~-~GrG~~e~~g~~~~vdi~~gTlsKA~Gs~G---gf 256 (410)
T PRK13392 185 ---ESCYSMDGDFAPMAAICDLA-EKYNAFTYVDEVHAVGLYGP-RGGGIAERDGLMDRIDMFQGTLSKAFGCLG---GY 256 (410)
T ss_pred ---CCCCCCCCCCCCHHHHHHHH-HHHCCEEEEECCCCCCCCCC-CCCCHHHHCCCCCCCEEEECCCCCCCCCCC---EE
T ss_conf ---25312478868999999999-98495999613100241358-998779972898766799850654123676---03
Q ss_pred CCCHHHHHHHHHHHC-CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEE
Q ss_conf 211012268753100-1222332222222-22222346764322222211000000024553047760330274089986
Q gi|254780602|r 251 AAGALSLIKSMIVLQ-GQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYP 328 (400)
Q Consensus 251 ~v~~~~li~~l~~~~-~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~ 328 (400)
+++++++++.+.... .+..+..-+|.+. ++.++++.-++ -...++.+..+.+++.+.|.+. |+.+...+.- -+-+
T Consensus 257 v~gs~~~id~l~~~ar~~IfStalpP~~~aa~~~al~~l~~-~~~~r~~L~~~~~~lr~~l~~~-g~~~~~s~s~-Iipi 333 (410)
T PRK13392 257 IAASADLVDFVRSFAPGFIFTTALPPPVVAGARAALRHLKT-SQWERDAHQDRTASLKAKLNAN-GIPVLPSPSH-IVPV 333 (410)
T ss_pred EECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCC-EEEE
T ss_conf 42373778999873875436667899999999999999871-9588999999999999999867-9984899998-7999
Q ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCC--EEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 26410233211332248989999999987397998350228-997--2899962--99999999999999999860
Q gi|254780602|r 329 SCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGP--SIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~--~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
-+.+ ......++.+|+++.||.+.|-..=. +.+ -+|+++. .++++++..++.|.+.-+.+
T Consensus 334 ~ig~-----------~~~a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~dId~l~~~L~~v~~e~ 398 (410)
T PRK13392 334 MVGD-----------PEKCKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDEDIDALVAALVAIWREL 398 (410)
T ss_pred EECC-----------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9799-----------9999999999987599899867888379997449877586689999999999999999980
No 123
>PRK10534 L-threonine aldolase; Provisional
Probab=99.83 E-value=1.5e-20 Score=145.23 Aligned_cols=317 Identities=18% Similarity=0.228 Sum_probs=200.1
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 26656589749889999999999983887569987789899999999864210133332233233454333322222223
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV 112 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~ 112 (400)
+|||-.-.. -.|.|.+++||.+|- -|.--|+.-+-..+|.+.+|+.+ |.+ .-+++ +.++.+..+++++.|
T Consensus 1 ~id~rSDtv-t~p~~~m~~Am~~A~-~GddvYgeDptv~~Le~~~A~l~----G~e---aalFv-psGTmaN~iAl~~~~ 70 (333)
T PRK10534 1 MIDLRSDTV-TRPSRAMLEAMMAAP-VGDDVYGDDPTVNALQDYAAELS----GKE---AALFL-PTGTQANLVALLSHC 70 (333)
T ss_pred CCCCCCCCC-CCCCHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH----CCC---EEEEE-CCCCHHHHHHHHHHC
T ss_conf 924654428-999999999997375-57754576989999999999985----897---18995-787578999999847
Q ss_pred CCCCCCCCCCCCC-CCCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC------CCCCEEECCCCCCCCCCCCC
Q ss_conf 3223222233332-32222--222222222222222223222103331000122------12201211354210000123
Q gi|254780602|r 113 NMGDEVLIPRPYW-VSYPD--MVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP------KTKWLFLNSPSNPSGVVYSQ 183 (400)
Q Consensus 113 ~~Gd~Vlv~~P~y-~~y~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~k~i~l~nP~NPTG~v~s~ 183 (400)
+||++|++..-+- ..|+. ...+.|..+.+++...++ .+++++++..+.+ .++++.+-|.+| |++||.
T Consensus 71 ~~g~~vi~~~~sHI~~~E~Gg~a~l~g~~~~~i~~~~~g--~~~~~~v~~~i~~~~~h~~~~~lv~lenT~~--G~v~p~ 146 (333)
T PRK10534 71 ERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADG--TLPLDKVAAKIKPDDIHFARTRLLSLENTHN--GKVLPR 146 (333)
T ss_pred CCCCEEEECCCCCCHHCCCCCHHHHCCCCEEEECCCCCC--CCCHHHHHHHCCCCCCCCCCEEEEEEEECCC--CEECCH
T ss_conf 899869875777610114664898769521551478898--2489999986187887667624665540358--853689
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCC--CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCHHHHHHH
Q ss_conf 3332111223333320111012211--00000122332221112333225741465443223445444-22110122687
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYE--HIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAAGALSLIKS 260 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~--~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~~~~li~~ 260 (400)
+++++|.++| +++++.+-.|-+=- -.+..+.++ ..+... . .++++ +|||.++.| +| .+++++++|++
T Consensus 147 ~el~~i~~~a-~~~gl~vHlDGARl~NA~~a~g~~~---~e~~~~-~-Dsvs~-clsKgLGap---~Gsvl~g~~~~i~~ 216 (333)
T PRK10534 147 EYLKEAWEFT-RERNLALHVDGARIFNAVVAYGCEL---KEITQY-C-DSFTI-CLSKGLGTP---VGSLLVGNRDYIKR 216 (333)
T ss_pred HHHHHHHHHH-HHCCCEEEECHHHHHHHHHHCCCCH---HHHHHH-C-CEEEE-EEECCCCCC---CCEEEECCHHHHHH
T ss_conf 9999999999-9759837623277764465429999---999975-8-98898-740678873---32146468999999
Q ss_pred HHHHCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf 531001222332222222--222223467643222222110000000245530477603302740899862641023321
Q gi|254780602|r 261 MIVLQGQQTSGACSIAQW--AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 261 l~~~~~~~~~~~~~~~q~--a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
...++.....++.-.... ++..+|++ ++....+ -.+|...+.+.|+++ |+.+..|+..+ +|+++++.
T Consensus 217 a~~~RK~~GGgmrQ~g~lAAa~l~aL~~---~~~rl~~-dH~nA~~La~~L~~~-g~~~~~~eTN~-vf~~~~~~----- 285 (333)
T PRK10534 217 AIRWRKMTGGGMRQAGILAAAGLYALKH---NVARLQE-DHDNAAWLAQQLREA-GADVMRQDTNM-LFVRVGEE----- 285 (333)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHC---CHHHHHH-HHHHHHHHHHHHHHC-CCCCCCCCCCE-EEEECCHH-----
T ss_conf 9999998546555899999999999963---9998999-999899999999976-98748997647-99977877-----
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHHHH
Q ss_conf 1332248989999999987397998350228997289996--29999999999999999986
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l~~ 398 (400)
...+|.+. ++++||.+.. .+.+|+.. .++++++++.++.+++++.+
T Consensus 286 -------~~~~l~~~-~~~~gv~~~~------~~~vR~Vth~~it~~dv~~~i~~~r~~l~~ 333 (333)
T PRK10534 286 -------NAAALGEY-MRERNVLINA------SPIVRLVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred -------HHHHHHHH-HHHCCEEECC------CCCEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf -------79999999-9987967579------981899980899999999999999999719
No 124
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=7.4e-20 Score=141.02 Aligned_cols=328 Identities=16% Similarity=0.140 Sum_probs=194.2
Q ss_pred CCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCC---CCCCCH----HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9726656589-7498899999999999838875699---877898----9999999986421013333223323345433
Q gi|254780602|r 31 IDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYT---AVAGIS----PLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 31 ~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~---~~~G~~----~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+++|+|+..| -++...|.++++..++++.=-++-+ -..|.. +|-+.+|+|+ |. ++-+++++| ..
T Consensus 45 r~~i~f~SNdYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~LA~~~----g~---e~allf~SG-y~ 116 (404)
T PRK13393 45 REVTVWCSNDYLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH----GK---EAALLFTSG-YV 116 (404)
T ss_pred EEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHH----CC---CCEEEECCH-HH
T ss_conf 47998774344576789999999999999868998766020188799999999999986----99---919998744-88
Q ss_pred CCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC----CCCCEEECCCCCC
Q ss_conf 33222222233--22322223333232222222222222222222223222103331000122----1220121135421
Q gi|254780602|r 103 VIFNALMATVN--MGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP----KTKWLFLNSPSNP 176 (400)
Q Consensus 103 ~l~~~~~~~~~--~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~k~i~l~nP~NP 176 (400)
+...++.++++ |||.|+.-.-.-......+++.+++++.++ +-|+++|++.+.. ++++|++
T Consensus 117 AN~g~i~aL~~~~~~d~i~~D~l~HaSi~dG~rls~a~~~~f~-------HnD~~~Le~~L~~~~~~~~~lIv~------ 183 (404)
T PRK13393 117 SNWAALSTLASRLPGCVILSDELNHASMIEGIRHSRAETRIFR-------HNDPADLERKLSDLDPHAPKLVAF------ 183 (404)
T ss_pred HHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEE-------CCCHHHHHHHHHHCCCCCCCEEEE------
T ss_conf 8999999985789997899987545989998885479879982-------799999999998562248808999------
Q ss_pred CCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 000012----3333211122333332011101221100000122332221112333225741465443223445444221
Q gi|254780602|r 177 SGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAA 252 (400)
Q Consensus 177 TG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v 252 (400)
=.||| ...+.+|+++| ++++.++++||+|+.=+++. ....+.....-..+..|.++||||.|+..| ||++
T Consensus 184 -egVfSMdGDiapL~el~~L~-~~y~a~L~VDeAH~~Gv~G~-~G~G~~e~~gl~~~vdi~~gTfsKA~Gs~G---g~v~ 257 (404)
T PRK13393 184 -ESVYSMDGDIAPIAEICDVA-DKHGAMTYLDEVHAVGLYGP-RGGGIAERDGLADRLTIIEGTLAKAFGVVG---GYIT 257 (404)
T ss_pred -EEECCCCCCCCCHHHHHHHH-HHCCCEEEEECCCCCCCCCC-CCCCHHHHCCCCCCCEEEEEECCCCCCCCC---CEEE
T ss_conf -65535578856899999999-74094999844320010368-998788873898876289971776433577---5031
Q ss_pred CHHHHHHHHHHH-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEEC
Q ss_conf 101226875310-01222332222222-2222234676432222221100000002455304776033027408998626
Q gi|254780602|r 253 GALSLIKSMIVL-QGQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSC 330 (400)
Q Consensus 253 ~~~~li~~l~~~-~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~ 330 (400)
+++++++-+... +.+..+.+.+|.+. ++.++++.-++ -...++.+.++..++.+.|++. |+.....++- -+-+-+
T Consensus 258 gs~~~id~L~~~ar~~IfStalpP~~~aa~~~al~~l~~-~~~~r~~L~~n~~~~r~~L~~~-G~~~~~s~s~-Iipi~i 334 (404)
T PRK13393 258 GSAALCDFIRSFASGFIFTTSLPPAVAAGALASIRHLKA-SSAERERHQDRVARLRARLDQA-GVPHMDNPSH-IVPVMV 334 (404)
T ss_pred CCHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCC-EEEEEE
T ss_conf 476889999984728652779889999999999999861-9699999999999999999966-9997899988-799996
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCC--EEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 410233211332248989999999987397998350228-997--2899962--99999999999999999860
Q gi|254780602|r 331 QDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGP--SIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~--~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
.+ ......++..|++++||.+.|-..=. +.+ -+|+++. .++++++..++.|++..++|
T Consensus 335 g~-----------~~~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~~did~l~~~L~~v~~~l 397 (404)
T PRK13393 335 GD-----------AVLCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (404)
T ss_pred CC-----------HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 99-----------9999999999986189899988898589997359987688799999999999999999983
No 125
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.82 E-value=2.9e-19 Score=137.42 Aligned_cols=328 Identities=16% Similarity=0.170 Sum_probs=191.9
Q ss_pred CCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCHH----HHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 99726656589-74988999999999998388756998---778989----99999998642101333322332334543
Q gi|254780602|r 30 GIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTA---VAGISP----LREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 30 g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~~----lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
++++++|+..+ -++.-.|.++++..+++++-.++-+. ..|..+ |-+.+|+|+ |. ++-+++.+| -
T Consensus 44 ~r~~~~FsSNdYLGLs~~p~v~~a~~~a~~~~G~gs~gSrl~~G~~~~h~~LE~~LA~~~----g~---e~allf~SG-y 115 (406)
T PRK09064 44 AREVTVWCSNDYLGMGQHPKVIEAMHEALDRCGAGAGGTRNISGTNHYHVELERELADLH----GK---EAALVFTSG-Y 115 (406)
T ss_pred CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH----CC---CCEEEECCH-H
T ss_conf 869998465443577799999999999999848998777704058799999999999985----88---858997741-7
Q ss_pred CCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC----CCCCEEECCCCC
Q ss_conf 3332222222332--2322223333232222222222222222222223222103331000122----122012113542
Q gi|254780602|r 102 HVIFNALMATVNM--GDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP----KTKWLFLNSPSN 175 (400)
Q Consensus 102 ~~l~~~~~~~~~~--Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~k~i~l~nP~N 175 (400)
.+...++.++++. +|.|+.-.-.-.....-+++.+++++.++ +-|+++|++.+.. ++|+|++
T Consensus 116 ~AN~g~i~aL~~~~p~~~i~~D~l~HASiidG~rls~a~~~~f~-------HND~~~Le~~L~~~~~~~~~iIvt----- 183 (406)
T PRK09064 116 VSNDATLSTLAKLIPGCVIFSDELNHASMIEGIRRSGAEKHIFR-------HNDVAHLEELLAAADPDRPKLIAF----- 183 (406)
T ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHCCCCCCEEEEE-----
T ss_conf 88899999985679996899814233248999875599589947-------999899999998377789709999-----
Q ss_pred CCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 1000012----333321112233333201110122110000012233222111233322574146544322344544422
Q gi|254780602|r 176 PSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA 251 (400)
Q Consensus 176 PTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 251 (400)
=.+|| ...+.+|+++| ++++.+++.||+|+.=+++. ....+.....-..+..+.++||||.|+..| ||+
T Consensus 184 --EgVfSMdGDiapL~~l~~l~-~~y~a~L~VDeAH~~Gv~G~-~G~G~~e~~g~~~~vdi~~gTfsKA~Gs~G---gfv 256 (406)
T PRK09064 184 --ESVYSMDGDIAPIAEICDLA-DKYNAMTYLDEVHAVGMYGP-RGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYI 256 (406)
T ss_pred --EECCCCCCCCCCHHHHHHHH-HHHCCEEEEECCCCCCCCCC-CCCCHHHHCCCCCCCEEEEEECCCCCCCCC---EEE
T ss_conf --70001678765799999999-86095999962210220368-887739872986667079921665235775---043
Q ss_pred CCHHHHHHHHHHHC-CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCE-EEEE
Q ss_conf 11012268753100-1222332222222-2222234676432222221100000002455304776033027408-9986
Q gi|254780602|r 252 AGALSLIKSMIVLQ-GQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAF-YLYP 328 (400)
Q Consensus 252 v~~~~li~~l~~~~-~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~-y~~~ 328 (400)
++++++++-+.... .+..+...++.+. ++.++++.-++ -.+.++.+.++.+++.+.|++. |+.+...+.-. -++
T Consensus 257 ~gs~~~id~L~~~ar~~IfStalpp~~~aa~~~al~~l~~-~~~~r~~L~~n~~~~r~~l~~~-G~~~~~s~spIipi~- 333 (406)
T PRK09064 257 AGSASLIDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE-SNEERERHQERAAKLKASLDAA-GIPVMPNPSHIVPVI- 333 (406)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCEEEEE-
T ss_conf 1788999999871853002678999999999999999870-9077899999999999867744-997479999879999-
Q ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCC--EEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 26410233211332248989999999987397998350228-997--2899962--99999999999999999860
Q gi|254780602|r 329 SCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGP--SIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~--~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
+.+ ......+++.|++++||.+.|-..=. +.+ -+||++. .++++++..++.|++..+++
T Consensus 334 -ig~-----------~~~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l~~~L~ev~~~~ 397 (406)
T PRK09064 334 -VGD-----------PEKCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHLVEALVEVWARL 397 (406)
T ss_pred -ECC-----------HHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf -599-----------9999999999998689878108899889998469988686699999999999999999980
No 126
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.81 E-value=2.9e-19 Score=137.36 Aligned_cols=329 Identities=16% Similarity=0.149 Sum_probs=194.1
Q ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCC---CCCC----HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 699726656589-74988999999999998388756998---7789----899999999864210133332233233454
Q gi|254780602|r 29 KGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTA---VAGI----SPLREAIVEKFRRDNDLHYTSDQIIVGTGA 100 (400)
Q Consensus 29 ~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~----~~lR~aia~~~~~~~g~~~~~e~I~it~G~ 100 (400)
.|+++|+|+..+ -++...|.++++..++++.--.+-+. ..|. .+|-+++|+|+ |. ++-+++.+|
T Consensus 40 dG~~~lnf~SndYLGL~~~p~v~~a~~~a~~~yG~gs~~Srl~~G~~~~h~~LE~~lA~~~----g~---e~allf~SG- 111 (395)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEQKLAKFL----GT---EDAILYSSC- 111 (395)
T ss_pred CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----CC---CCEEEECCH-
T ss_conf 8938999776765578899899999999999729998776857478399999999999986----99---949997552-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC----CC-CCEEECCCCC
Q ss_conf 333322222223322322223333232222222222222222222223222103331000122----12-2012113542
Q gi|254780602|r 101 KHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP----KT-KWLFLNSPSN 175 (400)
Q Consensus 101 ~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~-k~i~l~nP~N 175 (400)
..+...++.+++.++|.|+.-.-.-.....-+++.+++.+.++ +-|+++|++.+.. .. +.++++
T Consensus 112 y~aN~~~i~aL~~~~d~i~~D~l~HaSiidG~~ls~a~~~~f~-------HnD~~~Le~~L~~~~~~~~~~~~ivt---- 180 (395)
T PRK06939 112 FDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEAKEAGARHKLIAT---- 180 (395)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHHHHCCCCEEEEEE----
T ss_conf 7767889999647998899845635889999986589479966-------89999999999960021586289999----
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCCCC
Q ss_conf 10000123----3332111223333320111012211000001223322211123332257414654432-234454442
Q gi|254780602|r 176 PSGVVYSQ----NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY-AMTGLRIGY 250 (400)
Q Consensus 176 PTG~v~s~----~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~ 250 (400)
=.|||- ..+.+|+++| ++++.+++.||+|+.=+++. ....+.....-..+..|.++||||.| +..| ||
T Consensus 181 --egVfSMdGDiapL~~l~~L~-~~y~a~L~vDeAH~~GvlG~-~G~G~~e~~gl~~~vdi~~gTlsKA~~G~~G---gf 253 (395)
T PRK06939 181 --DGVFSMDGDIANLPEICDLA-DKYDALVMVDDSHAVGFLGE-NGRGTVEHCGVMDRVDIITGTLGKALGGASG---GY 253 (395)
T ss_pred --ECCCCCCCCCCCHHHHHHHH-HHHCEEEEEECCCCEEEECC-CCCCHHHHCCCCCCCEEEECCCHHHHHCCCC---CE
T ss_conf --66777787601599999999-97273798614300003458-9986799809998868997732766624765---14
Q ss_pred CCCHHHHHHHHHHH-CCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEE
Q ss_conf 21101226875310-0122233222222-222222346764322222211000000024553047760330274089986
Q gi|254780602|r 251 AAGALSLIKSMIVL-QGQQTSGACSIAQ-WAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYP 328 (400)
Q Consensus 251 ~v~~~~li~~l~~~-~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~ 328 (400)
+++++++++.+... +++..+.+.+|.+ .++.++++--++ -.+.++.++++.+++.+.|++. |+.+...+.-. +-+
T Consensus 254 v~g~~~~i~~l~~~~r~~ifStalpp~~~aa~~~al~~~~~-~~~~r~~L~~n~~~~r~~l~~~-g~~~~~s~spI-~pi 330 (395)
T PRK06939 254 TAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEE-SDELRDRLWENARYFREGMTAA-GFTLGPGEHPI-IPV 330 (395)
T ss_pred EECCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCE-EEE
T ss_conf 51667889999984712211579987999999999999874-9599999999999999999967-99868999997-999
Q ss_pred ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CC--CEEEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf 26410233211332248989999999987397998350228--99--72899962--99999999999999999860
Q gi|254780602|r 329 SCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HG--PSIRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~--~~iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
-+.+ .....+++..|++ .|+.+.+-. |- +. .-+|+++. .++++++..++.|++..+.|
T Consensus 331 ~iG~-----------~~~a~~~~~~L~~-~Gi~v~~ir-~PtVp~g~~rlRi~lta~ht~~did~lv~~l~~v~~~l 394 (395)
T PRK06939 331 MLGD-----------AKLAQEFADRLLE-EGVYVIGFS-FPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (395)
T ss_pred EECC-----------HHHHHHHHHHHHH-CCCEEEEEC-CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9699-----------9999999999997-797482078-99889898569988787799999999999999999963
No 127
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=6.1e-19 Score=135.44 Aligned_cols=226 Identities=15% Similarity=0.176 Sum_probs=145.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 5699877898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG 137 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~ 137 (400)
.+|--++..-+.++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..-... +...|.
T Consensus 54 ~g~~YsR~~nPT~~~lE~~la~LEg----~~~a~~~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi 129 (398)
T PRK08249 54 PGHIYSRNTNPTVQALEAKVKELEG----AEAATSFSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKIFEEFLPRMGV 129 (398)
T ss_pred CCCEEECCCCHHHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCE
T ss_conf 8951408988659999999999829----970899647899999999997189998998189843799999976015986
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. .|+++++++++++||+||+-+|.|||-.+.+ +++|+++ ++++++.+++|..+.-=.+ .
T Consensus 130 ~v~fvd~-------~d~~~~~~ai~~~Tklv~~EtpsNP~l~v~D---i~~ia~i-A~~~g~~~vVDNTfatP~~----~ 194 (398)
T PRK08249 130 DVTLCET-------GDHEQIEREIAKGCDLLYLETPTNPTLKITD---IRRLSAA-AHEVGALVVVDNTFATPIN----Q 194 (398)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---HHHHHHH-HHHCCCEEEEECCCCHHHC----C
T ss_conf 9998799-------9869999855888618998448999746664---7999999-9874996998477420312----7
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 322211123332257414654432234454-4422110122687531001222332222222222223467643222222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
.++ .+ + --|++.|.||..+--|== .|.+++++++++++...+.....++++...+.+...|+. +.-..+
T Consensus 195 ~Pl-~~--G---aDivvhS~TKyi~GHsDvlgGvv~~~~~~~~~l~~~~~~~G~~lsP~~a~L~~RGL~T----L~lRm~ 264 (398)
T PRK08249 195 NPL-AL--G---ADLVVHSATKFLGGHADALGGVVCGPEALMAQVYHYREINGATLDPFAAYLILRGMKT----LALRVR 264 (398)
T ss_pred CCC-CC--C---CCEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHHH
T ss_conf 821-15--7---9879972662003687635105608899999999999704887891778998646897----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.+.
T Consensus 265 r~~~nA~~vA~~L~~hp~V~ 284 (398)
T PRK08249 265 QQQENAMALAEYLQTEPLVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99889999999998399807
No 128
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.79 E-value=4.4e-19 Score=136.31 Aligned_cols=312 Identities=15% Similarity=0.120 Sum_probs=193.9
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88999999999998388756998778989999999986421013333223323345433332222222332232222333
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRP 123 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P 123 (400)
.|.|.+++||.+|- .|.-.|+...-..+|.+.+++.+ | .+.+++.++++.+...++.++++||++|++..-
T Consensus 9 ~p~p~m~~A~~~A~-~gd~~yg~D~~~~~le~~~a~l~----g----~eaa~f~~sGT~aN~~al~~~~~~~~~vi~~~~ 79 (338)
T cd06502 9 GPTPEMLEAMAAAN-VGDDVYGEDPTTAKLEARAAELF----G----KEAALFVPSGTAANQLALAAHTQPGGSVICHET 79 (338)
T ss_pred CCCHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH----C----CCEEEEECCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 89999999998063-67866678989999999999984----8----982998078418999999985699975885046
Q ss_pred CC-CCCCCC--CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-------CCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32-322222--22222222222222223222103331000122-------122012113542100001233332111223
Q gi|254780602|r 124 YW-VSYPDM--VALCGGIPVFVDTQQDDNFQVSPEKLEQAITP-------KTKWLFLNSPSNPSGVVYSQNRLRALADVL 193 (400)
Q Consensus 124 ~y-~~y~~~--~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-------~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~ 193 (400)
+- ..|+.- ..+.|++++.++.. ++ .++++++++.+++ ++++|.+.|++| .|.+|+.+++++|.++|
T Consensus 80 aHi~~~E~g~~~~~~G~~~~~~~~~--~g-~l~~~~i~~~i~~~~~~h~~~~~lv~ient~e-~G~v~~~~el~~i~~~a 155 (338)
T cd06502 80 AHIYTDEAGAPEFLSGVKLLPVPGE--NG-KLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPLDELKAISALA 155 (338)
T ss_pred CCEEEECCCCHHHHCCCEEEEEECC--CC-CCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC-CCEECCHHHHHHHHHHH
T ss_conf 7145653773998749625643389--99-73899999963156886466520799873128-96312799999999999
Q ss_pred CCCCCCEEECCCCCCC--CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCHHHHHHHHHHHCCCCCC
Q ss_conf 3333201110122110--000012233222111233322574146544322344544422-1101226875310012223
Q gi|254780602|r 194 VRNPHVHIISDDIYEH--IVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA-AGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 194 a~~~~i~ii~De~Y~~--l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~-v~~~~li~~l~~~~~~~~~ 270 (400)
+++++.+-.|.+--. ++..+.. ...+... . .++++ ++||..++|+ |.+ ++++++++.+..++.....
T Consensus 156 -~~~gl~lH~DGARl~nA~~a~g~~---~~~~~~~-~-Dsvs~-~~sKglgap~---gavl~g~~~~i~~a~~~rK~~Gg 225 (338)
T cd06502 156 -KENGLPLHLDGARLANAAAALGVA---LKTYKSG-V-DSVSF-CLSKGGGAPV---GAVVVGNRDFIARARRRRKQAGG 225 (338)
T ss_pred -HHCCCEEEECCCCEECEEECCCCC---HHHHHHH-C-CEEEE-ECCCCCCCCC---CEEEECCHHHHHHHHHHHHHHCC
T ss_conf -974972665365300445415999---8998641-8-78999-6656677743---24787788999999999986475
Q ss_pred CCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHH
Q ss_conf 32222--2222222234676432222221100000002455304776033027408998626410233211332248989
Q gi|254780602|r 271 GACSI--AQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDL 348 (400)
Q Consensus 271 ~~~~~--~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~ 348 (400)
++... .-.+++.+|++ ..|++. ...-.++.+.+.+.|+++++. ...++-.+ ++++..... .....-.
T Consensus 226 ~mrq~g~lAAa~~~~L~~-~~~~~~-l~~dh~~A~~La~~l~~~~~~-~~~~etni-v~~~~~~~n-------~~~~~~~ 294 (338)
T cd06502 226 GMRQSGFLAAAGLAALEN-DLWLRR-LRHDHEMARRLAEALEELGGL-ESEVQTNI-VLLDPVEAN-------AVFVELS 294 (338)
T ss_pred CHHHHHHHHHHHHHHHHC-CHHHHH-HHHHHHHHHHHHHHHHHCCCC-CCCCCCCE-EEEECCCCC-------HHHHHHH
T ss_conf 364599999999999854-837899-999999999999999867997-66665775-898327541-------8898746
Q ss_pred HHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHH
Q ss_conf 9999999873979983502289972899962--999999999999999
Q gi|254780602|r 349 DFVNGLLEIEKVAVVQGSSFGHGPSIRISYA--VSDAILEEACVRIKR 394 (400)
Q Consensus 349 ~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~--~~~e~l~~al~rl~~ 394 (400)
+++..+ .+.|+.+.+ ++ .+.+|+.+. ++++++++.++.|++
T Consensus 295 ~~~~~~-~~~g~~~~~---~~-~~~vR~Vt~~~~t~~dvd~~i~~ik~ 337 (338)
T cd06502 295 KEAIER-RGEGVLFYA---WG-EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHH-HHCCEEEEE---CC-CCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 999999-968969994---69-99289998899999999999999962
No 129
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.79 E-value=8e-20 Score=140.80 Aligned_cols=322 Identities=16% Similarity=0.142 Sum_probs=193.9
Q ss_pred CCCCHHHHHHHHHHHHCC------CCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 988999999999998388------75699--8778989999999986421013333223323345433332222222--3
Q gi|254780602|r 43 FDMPENVKYAVVRAMERG------ETKYT--AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT--V 112 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~------~~~Y~--~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~--~ 112 (400)
-|+-|.++++|...+..- .+.|+ ......+.|+.||+-+ .++|++|++|+|++++..+++... .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH------CCCCCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 88989999999999875318961155757999999999999999983------999780899569847777999864876
Q ss_pred C----CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 3----22322223333232222222---2222222222222232221033310001221220121135421000012333
Q gi|254780602|r 113 N----MGDEVLIPRPYWVSYPDMVA---LCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNR 185 (400)
Q Consensus 113 ~----~Gd~Vlv~~P~y~~y~~~~~---~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~ 185 (400)
. .|.+|++..---+.....++ ..|..+.++|.+.++ .+|+++|+++++++|.++-+..-||=||++.+-++
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~v~~~G--~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~e 162 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNG--LVDLEQLEEALRPDTILVSIMHANNETGTIQPIAE 162 (386)
T ss_pred HHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCC--EECHHHHHHHCCCCCEEEEEEECCCCEEECCCHHH
T ss_conf 4235689858875543499999999998669757996888897--28799999863888459999850268201120999
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH-HHH---
Q ss_conf 3211122333332011101221100000122332221112333225741465443223445444221101226-875---
Q gi|254780602|r 186 LRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI-KSM--- 261 (400)
Q Consensus 186 l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li-~~l--- 261 (400)
|.++| ++++++..+|.+-. + |+-+..+..+ .-.+...|--|.+|.-| +|.+...+.+. ..+
T Consensus 163 ---i~~i~-k~~~i~fHvDAvQa---~-Gkipi~~~~~-----~vD~ls~SaHK~~GpkG--iGaLyv~~~~~~~p~i~G 227 (386)
T COG1104 163 ---IGEIC-KERGILFHVDAVQA---V-GKIPIDLEEL-----GVDLLSFSAHKFGGPKG--IGALYVRPGVRLEPLIHG 227 (386)
T ss_pred ---HHHHH-HHCCCEEEEEHHHH---C-CCEECCCCCC-----CCCEEEEEHHHCCCCCC--EEEEEECCCCCCCCEEEC
T ss_conf ---99999-97598179761332---5-7600460215-----76568731121369984--279998799873744604
Q ss_pred ----HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC-CCCEEEECCCCEEEEEECCCCCCC
Q ss_conf ----310012223322222222222234676432222221100000002455304-776033027408998626410233
Q gi|254780602|r 262 ----IVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV-PGIRYMIPDGAFYLYPSCQDLIGK 336 (400)
Q Consensus 262 ----~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~g~~~~~p~g~~y~~~~~~~~~~~ 336 (400)
...++ .+-+++.+ .+...+++...+.++.....++.-|+.+.+.|.+. |.+.+...... .++.....
T Consensus 228 GgQE~g~Rs-GTenv~~I--vg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~-----rlP~~~~~ 299 (386)
T COG1104 228 GGQERGLRS-GTENVPGI--VGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEP-----RLPNILNF 299 (386)
T ss_pred CCCCCCCCC-CCCCHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC-----CCCCEEEE
T ss_conf 767899788-87557999--99999999999877888999999999999999850996898688545-----78986899
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC-------------------CEEEEEEE--CCHHHHHHHHHHHHHH
Q ss_conf 21133224898999999998739799835022899-------------------72899962--9999999999999999
Q gi|254780602|r 337 KSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG-------------------PSIRISYA--VSDAILEEACVRIKRF 395 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-------------------~~iRis~~--~~~e~l~~al~rl~~~ 395 (400)
.. .....+.+ ...|+.+||++..|+++... +.||+||+ +++++++.+++.+++.
T Consensus 300 ~f----~gv~gE~l-l~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~ 374 (386)
T COG1104 300 SF----PGVEGESL-LLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEI 374 (386)
T ss_pred EE----CCCCHHHH-HHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 96----89757899-98610408687336434589987149999809996883724899737999899999999999999
Q ss_pred HHHCC
Q ss_conf 98609
Q gi|254780602|r 396 CHSLQ 400 (400)
Q Consensus 396 l~~l~ 400 (400)
++.||
T Consensus 375 i~~lr 379 (386)
T COG1104 375 IKRLR 379 (386)
T ss_pred HHHHH
T ss_conf 99986
No 130
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.79 E-value=1.9e-18 Score=132.43 Aligned_cols=234 Identities=15% Similarity=0.176 Sum_probs=143.7
Q ss_pred HHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 9999838875699877-89899999999864210133332233233454333322222223322322223333232222-
Q gi|254780602|r 53 VVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD- 130 (400)
Q Consensus 53 ~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~- 130 (400)
+.+.......+|--++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..-..
T Consensus 46 ~~~~~~~~~~g~~YsR~~nP-T~~~lE~~la~LEg----~~~a~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgt~~l 120 (403)
T PRK07503 46 GAACFAGEEAGHFYSRISNP-TLALLEQRMASLEG----GEAGLALASGMGAITATLWTLLRPGDEVIVGRTLYGCTFAF 120 (403)
T ss_pred HHHHHCCCCCCCEECCCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHH
T ss_conf 98762687679513089885-69999999999849----96488862789999999999659999899768875328999
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ---22222222222222222322210333100012212201211354210000123333211122333332011101221
Q gi|254780602|r 131 ---MVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 131 ---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
.+...|.++.+++. -|+++++++++++||+||+-+|.|||..+.+ +++|+++ ++++++++++|..+
T Consensus 121 ~~~~l~~~Gi~~~~vd~-------~d~~~~~~ai~~~Tkli~~Etp~NP~l~v~D---i~~ia~i-A~~~g~~~vVDNTf 189 (403)
T PRK07503 121 LHHGLGEFGVKVRHVDL-------TDAKALKAAISEKTRMIYFETPANPNMQLVD---IAAVVEA-ARGHDALVVVDNTY 189 (403)
T ss_pred HHHHHHHCCEEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---HHHHHHH-HHHCCCEEEEECCC
T ss_conf 98446317759998689-------8989999751867329999527999866305---7999999-98658859983675
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHH--HHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10000012233222111233322574146544322344-54442211012268753--1001222332222222222223
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMI--VLQGQQTSGACSIAQWAAVEAL 284 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~--~~~~~~~~~~~~~~q~a~~~~l 284 (400)
.-=.+ ..++ .+ + --|++.|.||.++--| .=.|.++++++.+.+++ .++.....++++...+.++..|
T Consensus 190 atP~~----~~Pl-~~--G---aDivvhS~TKYi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~lsP~da~L~lRGL 259 (403)
T PRK07503 190 CTPYL----QRPL-EL--G---ADLVVHSATKYLSGHGDITAGLVVGGKALVDRIRLEGLKDMTGAVLSPHDASLLMRGL 259 (403)
T ss_pred CCCCC----CCHH-HC--C---CCEEEEECCEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCC
T ss_conf 45140----1613-31--8---9889995450313787605579972617889999999987428868868889986467
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 46764322222211000000024553047760
Q gi|254780602|r 285 NGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 285 ~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
+. +.-..+.-.++...+.+.|++.|.++
T Consensus 260 ~T----L~lRm~~~~~nA~~lA~~L~~hp~V~ 287 (403)
T PRK07503 260 KT----LALRMDRHCANAQQVAEFLARQPAVE 287 (403)
T ss_pred CC----HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 75----99999999999999999997489955
No 131
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.78 E-value=8.9e-19 Score=134.42 Aligned_cols=318 Identities=14% Similarity=0.136 Sum_probs=188.9
Q ss_pred CCHHHHHHHHHHHH------C--CCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999999983------8--875-69987789899999999864210133332233233454333322222223322
Q gi|254780602|r 45 MPENVKYAVVRAME------R--GET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMG 115 (400)
Q Consensus 45 ~p~~i~~a~~~al~------~--~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G 115 (400)
.+++.++|+.+-=+ . +.+ .+.. +-..+|-+.+|+|+ | -|...+++|++.|.+.++.++|+||
T Consensus 13 l~~~a~~a~~~~gdgysvcd~c~~~ld~~~~-P~i~efe~~aAefl----G----~d~A~~V~Ggt~Gnqa~i~t~c~~G 83 (361)
T cd06452 13 LTPEARKALIEWGDGYSVCDFCRGRLDEIEK-PPIKDFHHDLAEFL----G----MDEARVTPGAREGKFAVMHSLCEKG 83 (361)
T ss_pred CCHHHHHHHHHHCCCCCHHHHCCCCCCCCCC-CCHHHHHHHHHHHC----C----CCEEEEECCCCHHHHHHHHHHHCCC
T ss_conf 8999999999867864714520565334769-98899999999871----9----9669994685208999999984799
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC------C-CCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 322223333-232222222222222222222223222103331000122------1-22012113542100001233332
Q gi|254780602|r 116 DEVLIPRPY-WVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP------K-TKWLFLNSPSNPSGVVYSQNRLR 187 (400)
Q Consensus 116 d~Vlv~~P~-y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~-~k~i~l~nP~NPTG~v~s~~~l~ 187 (400)
|+||+..-+ |..| ..+.+.|++++++|......|.++++.+++.|.+ + +++++++ ||+|..-...+++
T Consensus 84 D~VIv~~naH~S~~-~a~~laG~~~~~v~~~~~~~~~i~pe~~~~~Iee~~~e~g~~p~Lilit---~~dy~yG~~~dl~ 159 (361)
T cd06452 84 DWVVVDGLAHYTSY-VAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLT---HVDGNYGNLHDAK 159 (361)
T ss_pred CEEEECCCCHHHHH-HHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEE---CCCCCCCCCCCHH
T ss_conf 88985575128899-8888638469995677685665188999999999998618996499996---6787736631379
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 11122333332011101221100000122332221112333225741465443223445444221101226875310012
Q gi|254780602|r 188 ALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQ 267 (400)
Q Consensus 188 ~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~ 267 (400)
+|+++| ++|++.++.|+||..=.+ +.+...+ + --+++.|.||+++.++ .+|.+.+.++.++.+.+....
T Consensus 160 ~I~~ia-h~y~iPvlvD~A~~~g~l----pv~a~~~--g---aD~v~~s~hK~~~a~~-p~gvL~~~~~~~~~v~R~~~~ 228 (361)
T cd06452 160 KIAKVC-HEYGVPLLLNGAYTVGRM----PVSGKEL--G---ADFIVGSGHKSMAASA-PIGVLATTEEWADIVFRTSQM 228 (361)
T ss_pred HHHHHH-HHCCCCEEECCCCCCCCC----CCCHHHC--C---CCEEEEECCCCCCCCC-CEEEEEECCHHHHHHHHHCCC
T ss_conf 999999-985996897154224757----9875450--7---9689986565553457-437885050678888741101
Q ss_pred -------CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE--ECCCCEEEEEECCCCCCC
Q ss_conf -------223322--222222222234676432222221100000002455304776033--027408998626410233
Q gi|254780602|r 268 -------QTSGAC--SIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM--IPDGAFYLYPSCQDLIGK 336 (400)
Q Consensus 268 -------~~~~~~--~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~--~p~g~~y~~~~~~~~~~~ 336 (400)
+..|.+ .++ .++.+.+....+-+... +.--++.+++.+.|++++|+.+. .|..--..+.+-+.+.
T Consensus 229 ~~~K~~~~Lg~t~~~~~~-~~lmAS~~~~~~~v~~~-~eev~~ar~~~~el~kI~G~~~~ge~p~~~dl~~~dt~~~~-- 304 (361)
T cd06452 229 FKIKEVELLGCTLRGAPL-VTLMASFPHVKERVKRW-DEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD-- 304 (361)
T ss_pred CHHHHHHHHCCCCCCCHH-HHHHCCCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCCCE--
T ss_conf 104577874678655179-99980729999999877-78999999999998428453121557776774561478632--
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCEEE-ECCCCCCCCCEEEE-EEECCHHHHHHHHHHHHHHH
Q ss_conf 21133224898999999998739799-83502289972899-96299999999999999999
Q gi|254780602|r 337 KSPSGDVIRTDLDFVNGLLEIEKVAV-VQGSSFGHGPSIRI-SYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~Ll~~~gV~v-~pG~~Fg~~~~iRi-s~~~~~e~l~~al~rl~~~l 396 (400)
...........+|.+.| ++.||.. .||. .+.+.+ +|+.++|+++.-++.|++-.
T Consensus 305 -~~~~~~~~~G~~L~~~L-~~rgI~~~~~g~----t~~~~~~tyG~t~e~i~~l~~a~keI~ 360 (361)
T cd06452 305 -EIAKKHKRRGYFLYSEL-KKRGIHGIKPGL----TRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred -EEEECCCCCCCHHHHHH-HHCCCEEECCCC----CCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf -44104786500699999-876976871685----337999995168889999999999975
No 132
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=99.78 E-value=8e-18 Score=128.62 Aligned_cols=324 Identities=20% Similarity=0.193 Sum_probs=205.8
Q ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCCC-------CCCHHH----HHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 699726656589-749889999999999983887569987-------789899----99999986421013333223323
Q gi|254780602|r 29 KGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTAV-------AGISPL----REAIVEKFRRDNDLHYTSDQIIV 96 (400)
Q Consensus 29 ~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~~-------~G~~~l----R~aia~~~~~~~g~~~~~e~I~i 96 (400)
.|+.||+|+..| -.|...|.+++|.++++++ |+-. .|..++ -+.+|+| + + +..-|++
T Consensus 31 nG~~vinLsSNNYLGlA~hp~Lk~aA~~a~~~----yGvGAGAVRTIaGTl~lH~eLE~~LA~F-K---~---teAAl~f 99 (392)
T TIGR01825 31 NGKKVINLSSNNYLGLASHPRLKEAAKEAIQQ----YGVGAGAVRTIAGTLELHEELEEKLAKF-K---K---TEAALVF 99 (392)
T ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHH----CCCCCCCHHHHHHHHHHHHHHHHHHHHH-C---C---CCEEEHH
T ss_conf 88578740435545546887689999999986----5962241210433778999999998755-3---8---2011010
Q ss_pred CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC------C
Q ss_conf 34543333222222233223--2222333323222222---22222222222222232221033310001221------2
Q gi|254780602|r 97 GTGAKHVIFNALMATVNMGD--EVLIPRPYWVSYPDMV---ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK------T 165 (400)
Q Consensus 97 t~G~~~~l~~~~~~~~~~Gd--~Vlv~~P~y~~y~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~ 165 (400)
-+| -....-++.+++++|| -||=.+ -+|.+++ ++.+++.+.|. +.|+++|++.++++ -
T Consensus 100 qSG-F~~N~GvlSa~L~k~ddG~v~SdE---LNHASIIDG~RLtkA~k~~y~-------H~dm~DL~~~l~e~~~~Gqy~ 168 (392)
T TIGR01825 100 QSG-FNTNQGVLSALLRKGDDGIVLSDE---LNHASIIDGLRLTKAKKKIYK-------HVDMDDLERVLRENVEEGQYK 168 (392)
T ss_pred HCC-HHHHHHHHHHHHCCCCCEEEEECC---CCHHHHHHCCCCCCCCEEEEE-------CCCHHHHHHHHHHCCCCCCCC
T ss_conf 312-237799998762358871587200---020345504223788568984-------598458999997160337544
Q ss_pred CCEEECCCCCCCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEEECCCCCC
Q ss_conf 20121135421000012----3333211122333332011101221100000122332221112-333225741465443
Q gi|254780602|r 166 KWLFLNSPSNPSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEP-SLYERTLVVNGVSKA 240 (400)
Q Consensus 166 k~i~l~nP~NPTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~-~~~~~~i~~~S~SK~ 240 (400)
+-++++. | |+| ..-|-+|+|+ |+++|.++.+||||..=+.++ .-.....-.. +..+..|-++++||.
T Consensus 169 ~~l~vTD-----G-VFSMDGdvApLp~iVE~-Ae~Yda~~yVDDAHGsGVlGe-~GrGtV~HFGL~y~~v~~qvGTLSKA 240 (392)
T TIGR01825 169 KKLIVTD-----G-VFSMDGDVAPLPEIVEL-AEKYDALVYVDDAHGSGVLGE-KGRGTVKHFGLEYDKVDIQVGTLSKA 240 (392)
T ss_pred CEEEEEC-----C-EEECCCCCCCCCHHHHH-HHHCCCEEEEECCCCCCCCCC-CCCCEEECCCCCCCCEEEEECCHHHH
T ss_conf 3689966-----5-04256787887323346-324595799863346644477-88713530375416467885552232
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHH-HCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 22344544422110122687531-00122233222222-22222234676432222221100000002455304776033
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIV-LQGQQTSGACSIAQ-WAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~-~~~~~~~~~~~~~q-~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
||.=| ||+.+++++++-|.. .+-+.+|..-.|.. .|+.+|++.-++ -.+..+++-.|-+++.+.|.++ |+..-
T Consensus 241 ~GvvG---GY~AG~~~lidyL~~~aRPFLFSta~~Pa~~~A~~~Av~~l~~-~~~l~~kLW~Nt~ylk~~L~~L-Gydl~ 315 (392)
T TIGR01825 241 IGVVG---GYVAGSKELIDYLKARARPFLFSTALPPAVVAALIEAVDVLQE-SPELMEKLWDNTRYLKAGLSKL-GYDLG 315 (392)
T ss_pred HCCCC---CCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHH-CCCCC
T ss_conf 22566---4234888999999862898601257880789999999998707-9314777678899999876761-64114
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCCE--EEEEEE--CCHHHHHHHHHHH
Q ss_conf 027408998626410233211332248989999999987397998350228--9972--899962--9999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGPS--IRISYA--VSDAILEEACVRI 392 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~--iRis~~--~~~e~l~~al~rl 392 (400)
.++- +......++ -....||.++|++++||.+. +-.|- +.+- ||.-.+ -+.|+|++|++.+
T Consensus 316 ~S~t-----------PItPv~~Gd-e~~A~efS~rL~~~yGvFa~-sivFPTVp~g~ARiR~~~tA~HTkd~L~~al~ay 382 (392)
T TIGR01825 316 ESET-----------PITPVLIGD-EKVAQEFSRRLLDEYGVFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAY 382 (392)
T ss_pred CCCC-----------CCCCEEECC-CHHHHHHHHHHHHHCCEEEE-EEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHH
T ss_conf 7668-----------612458765-15689999987775290899-8421656698842124656130266799999999
Q ss_pred HHHHHHCC
Q ss_conf 99998609
Q gi|254780602|r 393 KRFCHSLQ 400 (400)
Q Consensus 393 ~~~l~~l~ 400 (400)
++.-+.++
T Consensus 383 e~~Gk~l~ 390 (392)
T TIGR01825 383 EKVGKELG 390 (392)
T ss_pred HHHHHHHC
T ss_conf 98678725
No 133
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.78 E-value=5e-18 Score=129.87 Aligned_cols=230 Identities=14% Similarity=0.193 Sum_probs=142.7
Q ss_pred CCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCC
Q ss_conf 7569987-78989999999986421013333223323345433332222222332232222333323222222----222
Q gi|254780602|r 61 ETKYTAV-AGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMV----ALC 135 (400)
Q Consensus 61 ~~~Y~~~-~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~----~~~ 135 (400)
..+|.-+ .|.| .++++.+.+....| .+.-++++.+..||..++.+++++||+|++++..|..-...+ ...
T Consensus 50 ~~~y~Y~R~~nP-T~~~le~~la~LEg----g~~a~~~sSGmaAi~~~ll~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~ 124 (386)
T PRK06767 50 DPSYIYSRLGNP-TVKLFEERMAVLEG----GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKF 124 (386)
T ss_pred CCCCEECCCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHC
T ss_conf 679503389886-79999999999849----9716885278999999997307999989983798223466999988873
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 22222222222232221033310001221220121135421000012333321112233333201110122110000012
Q gi|254780602|r 136 GGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC 215 (400)
Q Consensus 136 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~ 215 (400)
|.++.+++. -|.++++++++++||+||+=+|.|||-.+.+ +++|+++ ++++++++++|..+.--.+
T Consensus 125 gI~~~~~d~-------~~~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~i~~~-A~~~g~~~vvDNT~atP~~--- 190 (386)
T PRK06767 125 MITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRV-AKRNGLLVIVDNTFCSPYL--- 190 (386)
T ss_pred CEEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCCCCCCC---
T ss_conf 758999689-------8889999756888259999779998767127---9999998-6006734997457642200---
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHH-HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 233222111233322574146544322344-54442211012268-7531001222332222222222223467643222
Q gi|254780602|r 216 QFSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIK-SMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVN 293 (400)
Q Consensus 216 ~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~-~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 293 (400)
+.++ .+ + --|++.|.||.++--| .=.|.++++.+.+. .+...+......+++...+.+...|+. +.-
T Consensus 191 -~~Pl-~~--G---aDivihS~TKYi~GHsD~l~G~vv~~~~~~~~~~~~~~~~~G~~~sp~~a~l~~rGl~T----L~l 259 (386)
T PRK06767 191 -QRPL-EL--G---CDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKT----LAV 259 (386)
T ss_pred -CCCC-CC--C---CCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHH
T ss_conf -1544-36--7---97899714640047766031388616799999999999841787893477898626787----899
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCEE-EEC
Q ss_conf 222110000000245530477603-302
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIRY-MIP 320 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~~-~~p 320 (400)
..++-.++...+.+.|++.|.++. .-|
T Consensus 260 Rm~~~~~nA~~lA~~L~~hp~V~~V~yP 287 (386)
T PRK06767 260 RMDRHCDNAEKIVSFLKNHDAVEGVWYP 287 (386)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCEEECC
T ss_conf 9999999999999999639983758796
No 134
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.78 E-value=1.7e-19 Score=138.83 Aligned_cols=289 Identities=15% Similarity=0.121 Sum_probs=173.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCC-CCCC-----------CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899999999999838875699-8778-----------98999999998642101333322332334543333222222
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYT-AVAG-----------ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~-~~~G-----------~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
-|+|+.|++++.+.+.+. |+ |..+ +.+.|+.||+++ | .++++|++|+|+++++.+++..
T Consensus 8 tp~~~~v~~~~~~~~~~~---~~Np~s~~h~~g~~a~~~le~aR~~ia~~l----g--a~~~eiiFTsg~Tes~nl~i~g 78 (354)
T TIGR03235 8 TPVDPEVAEVMLPFLLEE---FGNPGSRTHEHGHNAKKAVERARKQVAEAL----G--AQTKEVIFTSGATESNNIAILG 78 (354)
T ss_pred CCCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHH----C--CCCCCEEEECCHHHHHHHHHHH
T ss_conf 989999999999999866---879730312899999999999999999980----9--9967789968837999999999
Q ss_pred CC----CCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 23----322322223333232222---22222222222222222322210333100012212201211354210000123
Q gi|254780602|r 111 TV----NMGDEVLIPRPYWVSYPD---MVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQ 183 (400)
Q Consensus 111 ~~----~~Gd~Vlv~~P~y~~y~~---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~ 183 (400)
+. ++||+|++..--.+.... .++..|.++.++|.++++ .+|+++++++++++|+++.+..-||=||++.+.
T Consensus 79 ~~~~~~~~g~~ii~s~~EH~svl~~~~~l~~~G~~v~~~~vd~~G--~id~~~l~~~l~~~t~lvsi~~~nnetG~i~pi 156 (354)
T TIGR03235 79 LARAHENKGKHIITTAIEHPAILEPARALERNGFTVTYLEVDESG--RVSVEELADAIRDDTLLVSIMHVNNETGSLQPI 156 (354)
T ss_pred HHHHHHCCCCEEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCC--CCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCH
T ss_conf 998502699999981003044799999999649689995557898--287799998726897799998875666763889
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH--H
Q ss_conf 33321112233333201110122110000012233222111233322574146544322344544422110122687--5
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKS--M 261 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~--l 261 (400)
++ |+++| ++++++++.|.+..- +.-...+... .--+...|..|.+|..| +|.+...+++... +
T Consensus 157 ~~---i~~~~-~~~g~~~~vDa~Q~~----g~~~id~~~~-----~~D~~s~S~HK~~GP~G--iG~L~vr~~~~~~~~l 221 (354)
T TIGR03235 157 RE---IAELC-EAREVFFHSDAAQVV----GKITVDLERD-----HIDLISLSGHKAYGPKG--IGALYIRKRGKPKAPL 221 (354)
T ss_pred HH---HHHHH-HCCCCEEEEECHHCC----CCCCCCHHHH-----CCCEEEEECCCCCCCCC--EEEEEEECCCCCCCCC
T ss_conf 99---98865-225641562500115----8755577884-----99737631000348871--4999980466766664
Q ss_pred HHHC----CC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH-CCCCCEEEECCCCEEEEEECCCC
Q ss_conf 3100----12--22332-22222222222346764322222211000000024553-04776033027408998626410
Q gi|254780602|r 262 IVLQ----GQ--QTSGA-CSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQ-GVPGIRYMIPDGAFYLYPSCQDL 333 (400)
Q Consensus 262 ~~~~----~~--~~~~~-~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~-~~~g~~~~~p~g~~y~~~~~~~~ 333 (400)
..+. +. ...+. +.+.-.+..++++......++.....+..++.+.+.|+ .++++.+.-+... .++..
T Consensus 222 ~Pl~~GGgqe~g~r~GT~nv~~i~g~~~A~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~v~i~g~~~~-----r~p~i 296 (354)
T TIGR03235 222 APIMFGGGQERGLRPGTLPVPLIVGMGEAAEIARRNAQAWGVRLRAMCNLLRDALQTSLPGVKLNGDPAE-----TLPNI 296 (354)
T ss_pred CCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCC-----CCCCE
T ss_conf 6403689886874689965999999999999999828999999999999999999745996596588224-----75888
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC
Q ss_conf 23321133224898999999998739799835022
Q gi|254780602|r 334 IGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF 368 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F 368 (400)
.. ......+++++...| + .+|+|..|+++
T Consensus 297 ~s----~~~~gi~~~~l~~~L-~-~~iavstGSAC 325 (354)
T TIGR03235 297 LS----FSFEGVNPEALIRNL-K-ADAAVSTGSAC 325 (354)
T ss_pred EE----EEECCCCHHHHHHHH-C-CCCEEEHHHHC
T ss_conf 99----997996999999986-3-99899822420
No 135
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.77 E-value=5.5e-18 Score=129.61 Aligned_cols=226 Identities=16% Similarity=0.237 Sum_probs=141.4
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 5699877-89899999999864210133332233233454333322222223322322223333232222----222222
Q gi|254780602|r 62 TKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCG 136 (400)
Q Consensus 62 ~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g 136 (400)
.+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++.+..|..-.. .+...|
T Consensus 54 ~~~~YsR~~nP-T~~~lE~~la~LEg----g~~a~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgT~~l~~~~l~~~G 128 (399)
T PRK06234 54 SGYIYTRLGNP-TSTEVENKLALLEG----GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYG 128 (399)
T ss_pred CCCEECCCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCC
T ss_conf 78524299886-79999999999839----97599845889999999999718999899758872048999998865168
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 22222222222322210333100012212201211354210000123333211122333332011101221100000122
Q gi|254780602|r 137 GIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ 216 (400)
Q Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~ 216 (400)
.++.+++. -|+++++++++++||+||+-+|.|||..+.+ +++|++++.++.++++++|..+..=.+
T Consensus 129 i~~~~vd~-------~d~~~~~~ai~~~Tklv~~Etp~NP~l~v~D---i~~ia~iA~~~~g~~~vvDNT~atP~~---- 194 (399)
T PRK06234 129 VEVTFVDT-------SNLEEVRNALKANTKVVYLETPANPNLKVTD---IKAISNIAHENKECLVFVDNTFCTPYI---- 194 (399)
T ss_pred EEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---CHHHHHHHHHCCCCEEEEECCCCCCCC----
T ss_conf 57886268-------8969999647888449999789998866148---589999876557976872589776144----
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33222111233322574146544322344-544422110122687531--001222332222222222223467643222
Q gi|254780602|r 217 FSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIV--LQGQQTSGACSIAQWAAVEALNGPQDFVVN 293 (400)
Q Consensus 217 ~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 293 (400)
+.++ .+ + --|++.|.||.++--| .=.|.++++++.+.+++. ++.....++++...+.++..|+. +.-
T Consensus 195 ~~Pl-~~--G---aDivihS~TKyi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~lrGL~T----L~l 264 (399)
T PRK06234 195 QRPL-QL--G---ADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGVKDMTGSVIGPFEAFLIIRGMKT----LQI 264 (399)
T ss_pred CCCC-CC--C---CCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHH
T ss_conf 6740-04--8---978998256310588771546996559999999999988701886887888998624674----999
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 22211000000024553047760
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
..++-.++...+.+.|++.|.++
T Consensus 265 R~~r~~~nA~~lA~~L~~hp~V~ 287 (399)
T PRK06234 265 RMEKHCKNAMEVAEFLEKHPAVE 287 (399)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999998489847
No 136
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.77 E-value=5.7e-18 Score=129.50 Aligned_cols=305 Identities=18% Similarity=0.182 Sum_probs=193.4
Q ss_pred HHHCCCC-EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 9986997-2665658974988999999999998388756998-7789899999999864210133332233233454333
Q gi|254780602|r 26 LRSKGID-VLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 26 ~~~~g~~-ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
++..|+| +++|+-=.-.|...+.=.+-+. .|-. .-=..++++.--++ +|- +++.++++|-+++|
T Consensus 18 i~~~gr~~lyDltGLsggf~i~~~~~~Lle--------TYvGpaif~ek~~~~g~~H----lgG--~~e~~v~~NRTSsa 83 (346)
T TIGR03576 18 ISRGGRDSLYDLTGLAGGFKIDEEDLELLE--------TYVGPAIFEEKVQELGREH----LGG--PEEKILVFNRTSSA 83 (346)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCHHHHHHHH--------HHHCCHHHHHHHHHHHHHH----CCC--CCCEEEEECCCHHH
T ss_conf 851486642103445678443786888999--------7505087699999999987----399--83257774562699
Q ss_pred CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCC
Q ss_conf 3222222233223222233---3323222222222222222222222322210333100012212201211354210000
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPR---PYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVV 180 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~---P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v 180 (400)
|..+++++..+|..|+-.. |++|.+...++++|++.+..+ +.+++... ....++++++.+++..+
T Consensus 84 ilAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lagaey~E~d---------~~~el~~~---d~~slvviTgstmd~~v 151 (346)
T TIGR03576 84 ILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFESD---------ELSELKKI---DGTSLVVITGSTMDLKV 151 (346)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCCEEECC---------CHHHHCCC---CCCCEEEEECCCCCCEE
T ss_conf 9999998357887058978787899973020051487147506---------67762767---88718999378777300
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCC---CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 12333321112233333201110122110---000012233222111233322574146544322344544422110122
Q gi|254780602|r 181 YSQNRLRALADVLVRNPHVHIISDDIYEH---IVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL 257 (400)
Q Consensus 181 ~s~~~l~~i~~~~a~~~~i~ii~De~Y~~---l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l 257 (400)
++.+.+++++++ |+..++.+++||++.. ..|+..+ ...+ + --+++.|..|. |+|.|.|.+.+.+++
T Consensus 152 i~~d~~k~vI~~-Ak~~~a~V~vDDAsGARvR~L~gq~~---al~l--G---ADLvVTS~DKl--M~GPR~GlLaG~~eL 220 (346)
T TIGR03576 152 VSEEDLKRVIKQ-AKSKEAIVLVDDASGARVRRLYGQPP---ALDL--G---ADLVVTSTDKL--MDGPRGGLLAGRKEL 220 (346)
T ss_pred CCHHHHHHHHHH-HHHCCCEEEEECCCCCCHHHHCCCCC---CCCC--C---CCEEEEEHHHC--CCCCCCCEECCCHHH
T ss_conf 457889999999-87469849985488875166519998---6555--6---42688400212--667754112288899
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCC
Q ss_conf 68753100122233222222222222346764322222211000000024553047760330274089986264102332
Q gi|254780602|r 258 IKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKK 337 (400)
Q Consensus 258 i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~ 337 (400)
++++..........+.+|.+.++..+|+.-+ .++.++.+++..++....+ .++.+.+...|| ++-..+
T Consensus 221 V~ki~~~~~~~GlEaq~Pi~aAmv~aLe~f~--~~~l~~a~~r~~~~~l~~~---~~l~~e~TptGf-~ik~~~------ 288 (346)
T TIGR03576 221 VDKIKSVGEQFGLEAQAPLLAAVVRALEEFE--LSRIRDAFKRKEEVYLRLF---DKLNVERTPTGF-VIKGVE------ 288 (346)
T ss_pred HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHH---HCCCCCCCCCEE-EEECCC------
T ss_conf 9999999875277778415999999997079--9999999999999887653---035743278537-985656------
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CCCCEEEEEEEC-CHHHH
Q ss_conf 1133224898999999998739799835022-899728999629-99999
Q gi|254780602|r 338 SPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF-GHGPSIRISYAV-SDAIL 385 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F-g~~~~iRis~~~-~~e~l 385 (400)
.....+.+..||+++||...|..+. |....+||-|+. +-+++
T Consensus 289 ------~e~~~~~~~~LL~~ygIiTIta~GmpgasktlR~d~~skDAeri 332 (346)
T TIGR03576 289 ------EEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDLAAKDAERI 332 (346)
T ss_pred ------HHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCHHHH
T ss_conf ------88889999999997694898347788876326876202516551
No 137
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=3.5e-18 Score=130.82 Aligned_cols=226 Identities=15% Similarity=0.268 Sum_probs=139.9
Q ss_pred CCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCC
Q ss_conf 75699877-898999999998642101333322332334543333222222233223222233332322222----2222
Q gi|254780602|r 61 ETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALC 135 (400)
Q Consensus 61 ~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~ 135 (400)
..+|--++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..-... ....
T Consensus 54 ~~g~~YsR~~NP-T~~~lE~~la~LEg----~~~a~~~~SGmaAi~~~lla~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~ 128 (397)
T PRK07504 54 DPGFIYSRYSNP-TVDMFEKRMCALEG----AEDARATASGMAAVTAAILCQLKAGDHVVAARALFGSCRYVVETLLPRY 128 (397)
T ss_pred CCCCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 689634089886-49999999999829----9859873449999999999855899989855887556999999998607
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 22222222222232221033310001221220121135421000012333321112233333201110122110000012
Q gi|254780602|r 136 GGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC 215 (400)
Q Consensus 136 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~ 215 (400)
|.++.+++. -|+++++++++++||+||+=+|.|||..+.+ +++|+++ ++++++.+++|..+.--.+
T Consensus 129 Gi~~~~vd~-------~d~~~~~~ai~~~Tklv~~EspsNP~l~v~D---i~~ia~i-A~~~g~~~vVDNTfatP~~--- 194 (397)
T PRK07504 129 GIESTLVDG-------LDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAEI-ANQAGAKLVVDNVFATPLF--- 194 (397)
T ss_pred CEEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---CHHHHHH-HHHCCCEEEEECCCCCCCC---
T ss_conf 858998789-------8858899745877539998548999745137---1999999-9982995997366221112---
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 233222111233322574146544322344544-422110122687-531001222332222222222223467643222
Q gi|254780602|r 216 QFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAAGALSLIKS-MIVLQGQQTSGACSIAQWAAVEALNGPQDFVVN 293 (400)
Q Consensus 216 ~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v~~~~li~~-l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~ 293 (400)
+.++ .+ + --|+++|.||.++--|-=+ |.++++.+.+.+ +.........++++...+.++..|+. +.-
T Consensus 195 -~~Pl-~~--G---aDiVvhS~TKyi~GHsDvlgGvv~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~lRGL~T----L~l 263 (397)
T PRK07504 195 -QKPL-EL--G---AHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWVLLKGLET----LAV 263 (397)
T ss_pred -CCHH-HH--C---CCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHH
T ss_conf -6845-62--8---88799742521258876254699555899999999999971887883788998716772----999
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 22211000000024553047760
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
..++-.++...+.+.|++.|.++
T Consensus 264 Rm~r~~~nA~~iA~~L~~hp~V~ 286 (397)
T PRK07504 264 RVRQQTESAAAIADFLAGHPKVA 286 (397)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999997389955
No 138
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.77 E-value=4.6e-18 Score=130.06 Aligned_cols=322 Identities=13% Similarity=0.107 Sum_probs=180.5
Q ss_pred CCCEEECCCCC-CCCCCCHHHHHHHHHHHHCC-------CCCCCC---CCCCH----HHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99726656589-74988999999999998388-------756998---77898----99999999864210133332233
Q gi|254780602|r 30 GIDVLCLTAGE-PDFDMPENVKYAVVRAMERG-------ETKYTA---VAGIS----PLREAIVEKFRRDNDLHYTSDQI 94 (400)
Q Consensus 30 g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~-------~~~Y~~---~~G~~----~lR~aia~~~~~~~g~~~~~e~I 94 (400)
+...|||+..| -++.-.|.+++|+.++++.= .+|.+. ..|.. +|-+.||+|+ |. ++-+
T Consensus 3 ~~~~lnFsSNDYLGLs~~p~v~~a~~~a~~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~----g~---e~al 75 (370)
T PRK05937 3 SSLSIDFVTNDFLGFSRSTTLVHEVEKRYRLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH----GA---PEAF 75 (370)
T ss_pred CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH----CC---CCEE
T ss_conf 7707824032003878998999999999998731257898768687826278699999999999986----99---9399
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC---C--CCCCEE
Q ss_conf 23345433332222222332232222333323222222222222222222222322210333100012---2--122012
Q gi|254780602|r 95 IVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT---P--KTKWLF 169 (400)
Q Consensus 95 ~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~--~~k~i~ 169 (400)
++++| ..+...++.++++++|.|++-.-.-......+++.+++.+.++ +-|+++|++.+. . ..+.++
T Consensus 76 lf~sG-y~AN~~~i~al~~~~d~i~~D~l~HaSi~dG~rls~a~~~~f~-------Hnd~~~Le~~L~~~~~~~~~~~~i 147 (370)
T PRK05937 76 IVPSG-YMANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGKHQSFR-------HNDLDHLESLLESCRAVSFGRIFI 147 (370)
T ss_pred EECCH-HHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf 98766-8899999996089999899963061999999986499869968-------999899999998533117885599
Q ss_pred ECCCCCCCCCCCCC----CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 11354210000123----33321112233333201110122110000012233222111233322574146544322344
Q gi|254780602|r 170 LNSPSNPSGVVYSQ----NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 170 l~nP~NPTG~v~s~----~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
++ =.|||- ..+.+|+++| ++|+.+++.||+|+.=+++. ....+.... +..+..+++.||||+||..|
T Consensus 148 v~------egVfSMdGdiapL~~l~~l~-~~y~a~l~vDeAH~~Gv~G~-~GrG~~e~~-g~~~~~~i~~TlsKAlGs~G 218 (370)
T PRK05937 148 FV------CSVYSFKGTLAPLEQIIALS-KKYHAHLIVDEAHAMGIFGD-DGKGFCHSL-GYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred EE------ECCCCCCCCCCCHHHHHHHH-HHCCCEEEEECCHHCCCCCC-CCCCHHHHC-CCCCCCEEEEEHHHHHHHCC
T ss_conf 99------40566778755899999999-98197899733000043379-997578873-99887789813256621065
Q ss_pred CCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 54442211012268753100-12223322222222-22223467643222222110000000245530477603302740
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQ-GQQTSGACSIAQWA-AVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~-~~~~~~~~~~~q~a-~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
||+++++++++.+.... .+..+.+.+|.+.+ +..+++.-.+--+..|+.+.++++++.+.+.. ..-.++.|
T Consensus 219 ---gfv~~s~~~i~~l~~~ar~~IfStalpP~~~aa~~~al~~l~~e~~~~r~~l~~~~~~~~~~~~~-~~~~~i~p--- 291 (370)
T PRK05937 219 ---AALLSSSEVKQDLMLNSPPLRYSTGLPPHALISIQVAYDFLSQEGELARKQLFRLKEYFAQKFSS-AAPGCVQP--- 291 (370)
T ss_pred ---EEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC-CCCCCEEE---
T ss_conf ---38982889999999839640036755899999999999999859599999999999999985066-78997488---
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
Q ss_conf 89986264102332113322489899999999873979983502289972899962--999999999999999998609
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA--VSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~--~~~e~l~~al~rl~~~l~~l~ 400 (400)
+++ ++ ....++. ..|.+.||.+.|-. |-.-+-+||++. .++++++..++.|+++.++++
T Consensus 292 --I~~--~~------------~~~~~~~-~~L~~~Gi~v~~Ir-~PtVPrLRi~l~A~HT~edId~Lv~~L~~~~~~~~ 352 (370)
T PRK05937 292 --IFL--PD------------ISEQELY-SKLVETGIRVGVVC-FPTKPFLRVNLHAFNTEDEVDILVSVLHSYLEKCQ 352 (370)
T ss_pred --EEE--CC------------HHHHHHH-HHHHHCCEEEEEEC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --980--83------------8999999-99997897798689-89988378861866699999999999999999986
No 139
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=99.77 E-value=2e-18 Score=132.31 Aligned_cols=326 Identities=18% Similarity=0.147 Sum_probs=203.4
Q ss_pred HHHHCC--CCEEECCCCC-CCCCCCHHHHHH-HHHHHHC---CCC------CCCCCCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 999869--9726656589-749889999999-9999838---875------69987789899999999864210133332
Q gi|254780602|r 25 DLRSKG--IDVLCLTAGE-PDFDMPENVKYA-VVRAMER---GET------KYTAVAGISPLREAIVEKFRRDNDLHYTS 91 (400)
Q Consensus 25 ~~~~~g--~~ii~l~~G~-p~~~~p~~i~~a-~~~al~~---~~~------~Y~~~~G~~~lR~aia~~~~~~~g~~~~~ 91 (400)
++..+| +.+++|+..| -.+.-.|.++++ ..+++.+ |.+ ||.+. +.+|-++||+|.. .+
T Consensus 15 ~~~~dgPP~~~l~FsSNDYLGLa~hp~l~~af~~~~~~~~G~Gs~aSrLv~G~~~~--H~~LE~~lA~~kg-------~E 85 (378)
T TIGR00858 15 EVVRDGPPRRLLNFSSNDYLGLASHPELIQAFAQQAAEQYGAGSTASRLVTGNSPL--HEELEEELAEFKG-------TE 85 (378)
T ss_pred EEEECCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH--HHHHHHHHHHHHC-------CC
T ss_conf 78876887146531364401003798899999999998668773674340378568--9999999998628-------82
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC--
Q ss_conf 2332334543333222222233-----223222233332322222222222222222222232221033310001221--
Q gi|254780602|r 92 DQIIVGTGAKHVIFNALMATVN-----MGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK-- 164 (400)
Q Consensus 92 e~I~it~G~~~~l~~~~~~~~~-----~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-- 164 (400)
.=+++++| ..|..-++.++++ +||.|+--.-.-..-...+++.+++.+.|+ +-|+|.|++++.+.
T Consensus 86 aALlFsSG-Y~AN~Gvi~aL~~~~~l~~~DlilsD~LNHASl~dG~rLS~A~~~~y~-------H~D~~~L~~lL~~~~g 157 (378)
T TIGR00858 86 AALLFSSG-YLANVGVISALVGKRVLEKGDLILSDALNHASLIDGCRLSGARVLRYR-------HNDVEHLERLLEKNRG 157 (378)
T ss_pred CEEEEHHH-HHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEECC-------CCCHHHHHHHHHHCCC
T ss_conf 03420027-899999999875157656786044202547778986415986278706-------8998999999974015
Q ss_pred --CCCEEECCCCCCCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEEECCC
Q ss_conf --220121135421000012----3333211122333332011101221100000122332221112-333225741465
Q gi|254780602|r 165 --TKWLFLNSPSNPSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEP-SLYERTLVVNGV 237 (400)
Q Consensus 165 --~k~i~l~nP~NPTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~-~~~~~~i~~~S~ 237 (400)
-+.++++ =.|+| ...|.+|+++| |+|+.|+++||||.-=++++ .-.-.....+ ...+..|.++||
T Consensus 158 ~~~~~livT------DGVFSMDGD~APL~~L~~la-~~~~A~L~VDDAHgtGVlG~-~G~G~~~~fgl~~~~~~i~~GTl 229 (378)
T TIGR00858 158 KERRKLIVT------DGVFSMDGDIAPLPQLVALA-ERYGAWLMVDDAHGTGVLGE-DGRGTLEHFGLKPAPVDIQVGTL 229 (378)
T ss_pred CCCCEEEEE------CCEECCCCCCCCHHHHHHHH-HHCCCEEEEECCCCCCCCCC-CCCHHHHHCCCCCCCEEEEEEEC
T ss_conf 137768897------00131688848978999999-87098899986545366288-75414976598888726998613
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHH-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-
Q ss_conf 443223445444221101226875310-01222332222222-222223467643222222110000000245530477-
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVL-QGQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPG- 314 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~-~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g- 314 (400)
||.+|..| ||+++++.+++-|... +++.++..=+|.+. ++.++|+--++--.+.|+.+.++.+.+.+.++.+ |
T Consensus 230 SKAlGs~G---a~V~g~~~l~~yL~n~AR~~If~TaLPPa~~aA~~aAl~~i~~~~~~rr~~L~~~~~~~~~~l~~~-~~ 305 (378)
T TIGR00858 230 SKALGSYG---AYVAGSEALIDYLINRARTFIFSTALPPAVVAAALAALELIQEEEPWRREKLLALIARLRKGLEAL-GK 305 (378)
T ss_pred CHHHHHCH---HHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 16654052---563545899999984157642323665889999999999722248647899999999999998754-76
Q ss_pred --CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCCE--EEEEEE--CCHHHHHH
Q ss_conf --6033027408998626410233211332248989999999987397998350228-9972--899962--99999999
Q gi|254780602|r 315 --IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGPS--IRISYA--VSDAILEE 387 (400)
Q Consensus 315 --~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~~--iRis~~--~~~e~l~~ 387 (400)
+.+..++.-. +++=+.+ ..+-.++++.| ++.||.+.+-..=- ++|. +||++. -++++|+.
T Consensus 306 ~~f~~~~~~TPI-~P~~~G~-----------~~~al~~a~~L-~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~~di~~ 372 (378)
T TIGR00858 306 LVFQLMPSETPI-VPVIIGD-----------EESALALAEEL-QEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTEGDIDR 372 (378)
T ss_pred CCCEECCCCCCC-EEEEECC-----------CHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHH
T ss_conf 631016789862-5887089-----------28999999999-8779479102588887796104557740489889999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780602|r 388 ACVRI 392 (400)
Q Consensus 388 al~rl 392 (400)
.++.|
T Consensus 373 L~~~l 377 (378)
T TIGR00858 373 LLEAL 377 (378)
T ss_pred HHHHC
T ss_conf 99973
No 140
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.76 E-value=4.3e-18 Score=130.24 Aligned_cols=323 Identities=16% Similarity=0.151 Sum_probs=200.6
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899999999999838875699877898999999998642101333322332334543333222222233223222233
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPR 122 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~ 122 (400)
.++|+.|++|+.... .... ++-..++-+.+.+.+++.++.+ +.+-|+++.+++.++..++..++.+||+|++.+
T Consensus 8 ~~~~~~V~~Am~~~~---~~hR--~~~F~~~~~~~~~~L~~~~~~~-~~~~v~~~gsgt~a~ea~~~n~~~~~~kvlv~~ 81 (356)
T cd06451 8 SNVPPRVLKAMNRPM---LGHR--SPEFLALMDEILEGLRYVFQTE-NGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGV 81 (356)
T ss_pred CCCCHHHHHHHCCCC---CCCC--CHHHHHHHHHHHHHHHHHHCCC-CCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 988899999857999---8867--8899999999999999995899-984899957708999999985268888147885
Q ss_pred CC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33-23-222222222222222222222322210333100012-2122012113542100001233332111223333320
Q gi|254780602|r 123 PY-WV-SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT-PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHV 199 (400)
Q Consensus 123 P~-y~-~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i 199 (400)
=+ |. -+..+++..|..++.++.+... .+|++++++.+. ++++++.+++-.|.||...+ +++|.++| ++++.
T Consensus 82 ~G~fg~r~~~~a~~~g~~~~~i~~~~~~--~~~~~~v~~~l~~~~~~~v~~~h~etstG~~~~---l~~i~~~~-~~~~~ 155 (356)
T cd06451 82 NGVFGDRWADMAERYGADVDVVEKPWGE--AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALA-KKHDA 155 (356)
T ss_pred EEECCCCHHHHHHHCCCCEEEEECCCCC--CCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCC---HHHHHHHH-HHCCE
T ss_conf 3040541676441159723998689999--789899998863389658999665365101477---58899987-41572
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHCC------------
Q ss_conf 1110122110000012233222111233322574146544322-344544422110122687531001------------
Q gi|254780602|r 200 HIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA-MTGLRIGYAAGALSLIKSMIVLQG------------ 266 (400)
Q Consensus 200 ~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~li~~l~~~~~------------ 266 (400)
++++|.+.+. ...+ ..+ +...--+.+.|--|.++ .|| +|+++.+++.++++.....
T Consensus 156 ~~~vDavss~---g~~~-id~-----~~~giD~~~~ssqK~l~~ppG--l~~~~vs~~a~~~~~~~~~~~~~y~dl~~~~ 224 (356)
T cd06451 156 LLIVDAVSSL---GGEP-FRM-----DEWGVDVAYTGSQKALGAPPG--LGPIAFSERALERIKKKTKPKGFYFDLLLLL 224 (356)
T ss_pred EEEEECCHHH---CCCC-CCC-----CCCCEEEEEECCCCCCCCCCC--EEEEEECHHHHHHHHHCCCCCCCCCCHHHHH
T ss_conf 7997253110---5565-025-----666605999768864458996--6899988999999860389987777989999
Q ss_pred -------CCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf -------222332222222222223467-643222222110000000245530477603302740899862641023321
Q gi|254780602|r 267 -------QQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 267 -------~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
.....++...-.+..++|+.- ++-++...+++++..+.+.+.|+++ |++...+++.. .+.......
T Consensus 225 ~~~~~~~~~~~Tp~~~~i~al~~AL~~i~~~G~~~~~~r~~~l~~~l~~~l~~l-Gl~~~~~~~~~-----S~~vt~~~~ 298 (356)
T cd06451 225 KYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELR-----SPTVTAVLV 298 (356)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHC-----CCEEEEEEC
T ss_conf 876148987889880688999999999986065899999999999999999975-99656893654-----982799979
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-E-CCHHHHHHHHHHHHHHHH
Q ss_conf 1332248989999999987397998350228997289996-2-999999999999999998
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-A-VSDAILEEACVRIKRFCH 397 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~-~~~e~l~~al~rl~~~l~ 397 (400)
+ ...+..++..+|++++|+.+.+|.+--....|||+. + .+.++++..++.|++.|+
T Consensus 299 p---~g~~~~~~~~~l~~~~~i~i~~g~g~~~~~~fRIg~mG~~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 299 P---EGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred C---CCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 9---999999999999997899997886656895898618989999999999999999859
No 141
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.76 E-value=9.1e-18 Score=128.27 Aligned_cols=224 Identities=18% Similarity=0.252 Sum_probs=140.2
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877-89899999999864210133332233233454333322222223322322223333232222----2222222
Q gi|254780602|r 63 KYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGG 137 (400)
Q Consensus 63 ~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~ 137 (400)
+|--++ |.| .++++.+.+...-| .+.-++++.++.||..++.+++++||+|++.+..|..-.. .+...|.
T Consensus 52 g~~YsR~~nP-T~~~lE~~la~LEg----~~~a~~~sSGmaAi~~~ll~~l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi 126 (391)
T PRK08133 52 GNTYSRFTNP-TVRMFQERLAALEG----AEACVATASGMAAILSVVMALLQAGDHVVSSRSLFGSTLSLFEKIFARFGI 126 (391)
T ss_pred CCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCE
T ss_conf 9543489886-69999999999809----975999658899999999984579998996789745389999987410784
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. -|+++++++++++||+||+-+|.|||..+.+ +++|+++ ++++++++++|..+.--.+ .
T Consensus 127 ~~~~vd~-------~d~~~~~~ai~~~T~lv~~EtpsNP~l~v~D---i~~i~~i-A~~~g~~~vVDNT~atP~~----~ 191 (391)
T PRK08133 127 ETTFVDL-------TDLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEI-AHAAGALLVVDNCFCTPAL----Q 191 (391)
T ss_pred EEEECCC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---CHHHHHH-HHHCCCEEEEECCCCCCCC----C
T ss_conf 4446798-------7999999745878459999789999866555---3999999-8755875998789765244----4
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCHHHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 322211123332257414654432234454-44221101226-8753100122233222222222222346764322222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAAGALSLI-KSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v~~~~li-~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
.++ .+ .--|++.|.||.++--|=- .|.++++.+.+ +.+.........+++++..+.++..|+. +.-..
T Consensus 192 ~Pl-~~-----GaDivvhS~TKyi~GHsD~lgG~v~~~~~~~~~~~~~~~~~~G~~lsP~~a~l~lrGL~T----L~lRm 261 (391)
T PRK08133 192 QPL-KL-----GADVVIHSATKYLDGQGRVLGGAVVGSKEFIMEEVFGFLRTAGPTLSPFNAWVFLKGLET----LSLRM 261 (391)
T ss_pred CHH-HH-----CCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHH
T ss_conf 656-61-----883799966603048887444899636799999999999974888893277898604776----99999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
++-.++...+.+.|++.|.+.
T Consensus 262 ~r~~~nA~~lA~~L~~hp~V~ 282 (391)
T PRK08133 262 EAHSANALELAEWLEAHPGVE 282 (391)
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999997099914
No 142
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=2.5e-19 Score=137.76 Aligned_cols=166 Identities=17% Similarity=0.170 Sum_probs=125.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9899999999864210133332233233454333322222223322322223333232-222222222222222222223
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVS-YPDMVALCGGIPVFVDTQQDD 148 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~-y~~~~~~~g~~~~~v~~~~~~ 148 (400)
..|+|+.+|++++ ...|++++|+|+++|+.+++.++++|||+|+++.+.|.. +.......|+++++++.+.+.
T Consensus 2 ~~e~e~~la~~~~------~~~~~~i~~~sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHHC------CCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCC
T ss_conf 8999999999848------9989899956699999999999727999999826843756899998659877872347787
Q ss_pred CCCCHHHHHHCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222103331000-1221220121135421000012333321112233333201110122110000012233222111233
Q gi|254780602|r 149 NFQVSPEKLEQA-ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSL 227 (400)
Q Consensus 149 ~~~~d~~~l~~~-i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~ 227 (400)
.+..+.+.+++. ..++++++++++|+||||.+.+ +++|+++| +++++++++|++++.-...... . ....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~g~~~~---l~~I~~la-~~~gi~livD~a~~~g~~~~~~----~--~~~~ 145 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIA-KEYGILLLVDAASAGGASPAPG----V--LIPE 145 (170)
T ss_pred CCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCHHCCCCCCC----C--CCCC
T ss_conf 55468999999855999636887740147873201---99997356-2079699994684321606666----6--7777
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 32257414654432234454442211
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTGLRIGYAAG 253 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G~RiG~~v~ 253 (400)
..--++..|++|.++.|| .|.++.
T Consensus 146 ~~~D~~~~s~hK~lg~~g--~g~l~~ 169 (170)
T cd01494 146 GGADVVTFSLHKNLGGEG--GGVVIV 169 (170)
T ss_pred CCCEEEEECCCCCCCCCC--EEEEEE
T ss_conf 898599989866678985--799998
No 143
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.75 E-value=9.8e-18 Score=128.08 Aligned_cols=224 Identities=19% Similarity=0.264 Sum_probs=142.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCC
Q ss_conf 56998778989999999986421013333223323345433332222222332232222333323222222----22222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMV----ALCGG 137 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~----~~~g~ 137 (400)
+-|+- .|.|- ++++.+.+....| .+.-++++.+..||..++.+++.+||+|++++..|..-...+ ...|.
T Consensus 32 ~~Y~R-~~nPT-~~~le~~la~LEg----~~~a~~~sSGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi 105 (369)
T cd00614 32 YIYSR-IGNPT-VDALEKKLAALEG----GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGI 105 (369)
T ss_pred CEECC-CCCHH-HHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCE
T ss_conf 63419-98867-9999999999829----980899657899999999985288999999578852399999977860892
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. .|.++++++++++||+|++=+|.|||..+.+ +++|+++ ++++++.+++|..+..-.+ +
T Consensus 106 ~v~~~d~-------~d~~~~~~~i~~~t~li~~EspsNP~l~v~D---i~~i~~~-A~~~g~~~vvDNT~atp~~----~ 170 (369)
T cd00614 106 EVTFVDP-------DDPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAEL-AHEHGALLVVDNTFATPYL----Q 170 (369)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---CHHHHHH-HHHCCEEEEEECCCCCHHC----C
T ss_conf 3897678-------7868899763878508999658999706227---2999999-9766717997477431201----5
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32221112333225741465443223445-44422110-12268753100122233222222222222346764322222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
.++ .+ + --|++.|+||.++--|- =.|.++++ +++.+.+...+.....++++...+.+...|+. +.-..
T Consensus 171 ~Pl-~~--G---aDivv~S~TKy~~Ghsd~l~G~v~~~~~~~~~~l~~~~~~~G~~~sp~~a~l~lrgl~T----L~lRm 240 (369)
T cd00614 171 RPL-EL--G---ADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKT----LPLRM 240 (369)
T ss_pred CHH-HH--C---CCEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC----HHHHH
T ss_conf 857-74--8---96899955631258877576899827088899999999864576897888998860175----99999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
+.-.++...+.+.|++.|.+.
T Consensus 241 ~~~~~nA~~lA~~L~~hp~V~ 261 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVE 261 (369)
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999997199988
No 144
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.75 E-value=1.4e-17 Score=127.23 Aligned_cols=324 Identities=18% Similarity=0.162 Sum_probs=188.0
Q ss_pred HCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHC-CC--CC----CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 8699726656589-7498899999999999838-87--56----998778989999999986421013333223323345
Q gi|254780602|r 28 SKGIDVLCLTAGE-PDFDMPENVKYAVVRAMER-GE--TK----YTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 28 ~~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~-~~--~~----Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
..|.++++|+..| -.+.-.|.+++++.+++++ |. .+ ++...=+.+|-+.+|+|+ |. ++-+++++|
T Consensus 36 ~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~----g~---e~al~f~SG 108 (388)
T COG0156 36 ADGRKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL----GA---EAALLFSSG 108 (388)
T ss_pred CCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH----CC---CCEEEECCC
T ss_conf 17840676443774352688789999999999819998976704478289999999999984----99---848997153
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC---C--CCCEEECCCC
Q ss_conf 4333322222223322322223333232222222222222222222223222103331000122---1--2201211354
Q gi|254780602|r 100 AKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP---K--TKWLFLNSPS 174 (400)
Q Consensus 100 ~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~--~k~i~l~nP~ 174 (400)
-.+...++.+++++||-|+.-.-.-......+++.+++.+.+. +-|++.|++.+.+ . .+.+++
T Consensus 109 -y~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~-------HnD~~~Le~~l~~~~~~~~~~~~Iv---- 176 (388)
T COG0156 109 -FVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFK-------HNDLDHLEALLEEARENGARRKLIV---- 176 (388)
T ss_pred -CHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEEC-------CCCHHHHHHHHHHHHCCCCCCEEEE----
T ss_conf -1117778888568886899801020539988985788389826-------8999999999876222478754999----
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC---CCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 21000012----333321112233333201110122110000012233222---11123332257414654432234454
Q gi|254780602|r 175 NPSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV---NVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 175 NPTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~---~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
|=.||| -..+.+|+++ +++|+.++++||+|+-=++++ ....+. .+.+ .++.|.++||||.|+..|
T Consensus 177 --tegVfSMdGdiApL~~l~~L-~~ky~a~L~VDEAHa~Gv~G~-~GrG~~e~~g~~~--~~vdi~~gTlsKAlGs~G-- 248 (388)
T COG0156 177 --TEGVFSMDGDIAPLPELVEL-AEKYGALLYVDEAHAVGVLGP-NGRGLAEHFGLEP--EEVDIIVGTLGKALGSSG-- 248 (388)
T ss_pred --EECCCCCCCCCCCHHHHHHH-HHHHCCEEEEECCCCCCCCCC-CCCCHHHHHCCCC--CCCEEEEEECHHHHCCCC--
T ss_conf --82342189985778999999-998395899985201024379-9861788738887--651499987505432268--
Q ss_pred CCCCCCHHHHHHHHHHH-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEE
Q ss_conf 44221101226875310-01222332222222-22222346764322222211000000024553047760330274089
Q gi|254780602|r 248 IGYAAGALSLIKSMIVL-QGQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFY 325 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~-~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y 325 (400)
||+.++..+++.+... +.+..+..-+|.+. ++.++++.-++ ....++.++++...+.+.++.. |+.+.. ..+--
T Consensus 249 -g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~-~~~~r~~L~~~~~~~~~~~~~~-~~~~~~-s~s~I 324 (388)
T COG0156 249 -GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEE-GPERRERLQELAAFFRSLLKAL-GLVLLP-SESPI 324 (388)
T ss_pred -CEEECCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CCCCE
T ss_conf -4465759999999971865221477897889999999999875-8788999999999999888852-976578-88986
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CC--CEEEEEEE--CCHHHHHHHHHHHHH
Q ss_conf 98626410233211332248989999999987397998350228-99--72899962--999999999999999
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HG--PSIRISYA--VSDAILEEACVRIKR 394 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~--~~iRis~~--~~~e~l~~al~rl~~ 394 (400)
+.+-+.+ .....++...|+++ ||.+.+...=- +. .-+|++++ .++++++..++.|.+
T Consensus 325 ~pv~~gd-----------~~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~ 386 (388)
T COG0156 325 IPVILGD-----------EERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSE 386 (388)
T ss_pred EEEEECC-----------HHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 6169688-----------89999999999977-92571236899899965089871677999999999999985
No 145
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.74 E-value=7.4e-18 Score=128.82 Aligned_cols=223 Identities=20% Similarity=0.272 Sum_probs=141.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.|- ++++.+.+...-| .+.-++++.+..||..++.+++.+||+|++++..|..-... ....|.+
T Consensus 45 ~Y~R-~~nPt-~~~le~~la~LEg----~~~a~~~~SGmaAi~~~ll~l~~~Gd~il~~~~~Yg~t~~~~~~~l~~~Gi~ 118 (381)
T pfam01053 45 DYSR-SGNPT-RDALEERIAALEG----GEAALAFSSGMAAIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIE 118 (381)
T ss_pred EEEC-CCCHH-HHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCE
T ss_conf 2418-98867-9999999999819----9738993588999999997557999989995787375899999988715850
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|+++++++++++||+||+=+|.|||..+.+ +++|+++ ++++++.+++|..+.--.+ +.
T Consensus 119 v~~~d~-------~d~~~~~~~i~~~T~li~~EspsNP~l~v~D---i~~ia~i-A~~~gi~~vVDNT~atP~~----~~ 183 (381)
T pfam01053 119 VTFVDP-------SDLDALEAAIKPNTKAVFLETPTNPLLKVVD---IEAIAKI-AKKHGALVVVDNTFASPYL----QR 183 (381)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCEEECC---CHHHHHH-HHHCCCEEEEECCCCHHHH----CC
T ss_conf 676266-------5867899755888429999748998605126---0999999-8645735998788600521----24
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCH--HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2221112333225741465443223445-44422110--12268753100122233222222222222346764322222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGA--LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~--~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
++ .+ + --|++.|.+|.++--|= =.|.++.+ .++.+++...+.....++++...+.+...|+. +.-..
T Consensus 184 Pl-~~--G---aDivvhS~TKyi~GhsDvl~G~v~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T----L~lR~ 253 (381)
T pfam01053 184 PL-EL--G---ADIVVHSATKYIGGHSDVVGGVVVVNGREELAKRLRFLQNATGAVLSPFDAWLLLRGLKT----LGLRM 253 (381)
T ss_pred CH-HC--C---CCEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC----HHHHH
T ss_conf 13-30--7---977997534303688761305999688266899999999861687886888998714787----99999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
+.-.++...+.+.|++.|.++
T Consensus 254 ~~~~~nA~~lA~~L~~hp~V~ 274 (381)
T pfam01053 254 ERHQENALKLAEFLEEHPKVE 274 (381)
T ss_pred HHHHHHHHHHHHHHHHCCCCC
T ss_conf 998889999999997299977
No 146
>PRK06460 hypothetical protein; Provisional
Probab=99.74 E-value=1.4e-17 Score=127.12 Aligned_cols=223 Identities=16% Similarity=0.177 Sum_probs=144.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 5699877898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG 137 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~ 137 (400)
+.|+- .|.|- ++++.+.+....| .+.-++++.+..||..++.+++.+||+|++++..|..-... +...|.
T Consensus 37 y~Y~R-~gnPT-~~~le~~la~LEg----~~~a~~~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv 110 (375)
T PRK06460 37 YRYSR-EVNPT-VLKLAEKIAELEE----AEMGVAFSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFTDFLRNWGV 110 (375)
T ss_pred CEEEC-CCCHH-HHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCE
T ss_conf 25638-98877-9999999999819----980899535999999999997289998997178758679999999873786
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. -|.+.+++.++++||+||+=+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +
T Consensus 111 ~v~~~d~-------~~~~~~~~~~~~~Tklv~~EspsNP~l~v~D---i~~i~~ia-~~~gi~~vVDNT~atP~~----~ 175 (375)
T PRK06460 111 KVEVARP-------GEENILEKIKNKRYDVVFVETISNPLLRVID---IPELSKAC-KENGALLIVDSTFATPIN----Q 175 (375)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CHHHHHHH-HHCCCEEEEECCCCCCCC----C
T ss_conf 7797389-------9999999734767608999889998764058---58999999-874993897567414122----8
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3222111233322574146544322344-544422110122687531001222332222222222223467643222222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
.++ .+ + --|++.|.||.++--| .=.|.+++++++++++...+.....++++...+.++..|+. +.-..+
T Consensus 176 ~Pl-~~--G---aDivvhS~TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~~~~G~~lsP~~a~l~~rGl~T----L~lR~~ 245 (375)
T PRK06460 176 KPL-VQ--G---ADIVIHSASKFIAGHNDVIAGLAAGSYELMKKIDLMRRTLGTSLDPHAAYLTIRGIKT----LKIRMD 245 (375)
T ss_pred CHH-HH--C---CCEEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 814-51--7---9889995564346788734034248199999999998642787881668888636998----999999
Q ss_pred CCCCCCCCHHHHHHCCCCC
Q ss_conf 1100000002455304776
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~ 315 (400)
.-.++...+.+.|++.|.+
T Consensus 246 ~~~~nA~~lA~~L~~hp~V 264 (375)
T PRK06460 246 VINSNAQKIAEFLQEHPKV 264 (375)
T ss_pred HHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999748981
No 147
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.74 E-value=1.8e-17 Score=126.43 Aligned_cols=234 Identities=18% Similarity=0.260 Sum_probs=145.0
Q ss_pred HHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 9999838875699877-89899999999864210133332233233454333322222223322322223333232222-
Q gi|254780602|r 53 VVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD- 130 (400)
Q Consensus 53 ~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~- 130 (400)
+.+.......+|--++ |.| .++++.+.+...-| .+.-++++.++.||..++.+++.+||+|++....|..-..
T Consensus 54 ~~~~f~g~~~g~~YsR~~NP-T~~~lE~~la~LEg----g~~a~~~sSGMaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l 128 (406)
T PRK07810 54 AEKAFTGELDRYVYSRYGNP-TVSMFEERLRLIEG----APACFATASGMAAVFTALGALLGAGDRLVAARSLFGSCFVV 128 (406)
T ss_pred HHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHH
T ss_conf 99983798679613089886-28999999999709----98599843899999999999728999899837986377999
Q ss_pred ---CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ---22222222222222222322210333100012212201211354210000123333211122333332011101221
Q gi|254780602|r 131 ---MVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 131 ---~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
.+...|.++.+++. .|+++++++++++||+||+-+|.|||..+.+ +++|+++ ++++++.+|+|..+
T Consensus 129 ~~~~l~~~GI~~~~vd~-------~d~~~~~~ai~~~Tk~v~~EtpsNP~l~v~D---i~aia~i-A~~~g~~~vVDNTf 197 (406)
T PRK07810 129 CNEILPRWGVETVFVDG-------DDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVTEL-AHAAGAKVVLDNVF 197 (406)
T ss_pred HHHHHHCCCEEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---HHHHHHH-HHHCCCEEEEECCC
T ss_conf 99776448749999689-------8859999755888628998448999856116---7999999-99749859997887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCCHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10000012233222111233322574146544322344544-422110122687-5310012223322222222222234
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAAGALSLIKS-MIVLQGQQTSGACSIAQWAAVEALN 285 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v~~~~li~~-l~~~~~~~~~~~~~~~q~a~~~~l~ 285 (400)
.--.+ +.++ .+ + --|++.|.||.++--|-=+ |.++++.+.++. +...+.....+++....+.++..|+
T Consensus 198 aTP~~----~rPl-~~--G---ADiVvhS~TKyi~GHsd~lgG~v~~~~~~~~~~~~~~~~~~G~~lsP~~a~l~lrGL~ 267 (406)
T PRK07810 198 ATPLL----QQGF-PL--G---VDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFNAWTLLKGLE 267 (406)
T ss_pred CCCCC----CCCH-HC--C---CCEEEEECCCCCCCCCCEECCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 77553----5842-12--8---9889995353236887603636952678889999999997389898788899870689
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 6764322222211000000024553047760
Q gi|254780602|r 286 GPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 286 ~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
. +.-..++-.++...+.+.|++.|.++
T Consensus 268 T----L~lRm~r~~~nA~~vA~~L~~hp~V~ 294 (406)
T PRK07810 268 T----LAIRVQHSNASALRIAEFLEGHPAVR 294 (406)
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 7----99999999999999999997399813
No 148
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.74 E-value=4e-18 Score=130.44 Aligned_cols=202 Identities=24% Similarity=0.303 Sum_probs=138.9
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 72665658974988999999999998388756998778989999999986421013333223323345433332222222
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT 111 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~ 111 (400)
+.|+++- |++ .+.-.+++.++++.+... ...-..++-+++++|+...+ .+.++.++.||.+++.++
T Consensus 3 ~~IP~~~--p~~--~~~e~~~v~~~l~sg~~~--~G~~v~~FE~~~a~~~g~k~--------av~v~sgT~AL~lal~al 68 (379)
T PRK11658 3 EFLPFSR--PAM--GDEEIAAVKEVLRSGWIT--TGPKNQELEQAFCQLTGNQH--------AIAVSSATAGMHITLMAL 68 (379)
T ss_pred CCCCCCC--CCC--CHHHHHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHCCCE--------EEEECCHHHHHHHHHHHC
T ss_conf 8636789--999--999999999999669867--88779999999999978694--------999768899999999986
Q ss_pred -CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf -3322322223333232222222222222222222223222103331000122122012113542100001233332111
Q gi|254780602|r 112 -VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALA 190 (400)
Q Consensus 112 -~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~ 190 (400)
+.|||+||+|.-+|..-...+...|++|+.++.+++ .|.+|+++++++|+++||+|+.++- -|.. .++++|.
T Consensus 69 ~i~~gdeVi~p~~tf~at~~ai~~~Ga~pvf~Did~~-t~~id~~~~e~~it~~tkaIi~Vh~---~G~~---~d~~~i~ 141 (379)
T PRK11658 69 GIGPGDEVITPSQTWVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAIIPVHY---AGAP---ADLDAIR 141 (379)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCC-CCCCCHHHHHHHCCCCCEEEEEECC---CCCC---CCHHHHH
T ss_conf 9888399998995569999999981998997457456-5354889998654826549998568---8986---6377999
Q ss_pred CCCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCC-HHHHHHHHHHHCC
Q ss_conf 22333332011101221100-000122332221112333225741465--4432234454442211-0122687531001
Q gi|254780602|r 191 DVLVRNPHVHIISDDIYEHI-VYRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYAAG-ALSLIKSMIVLQG 266 (400)
Q Consensus 191 ~~~a~~~~i~ii~De~Y~~l-~~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~v~-~~~li~~l~~~~~ 266 (400)
++| +++++.||+|.+++.- .|.|... .+. . +.+.|| +|.++ +| --|.+++ ++++.+++..++.
T Consensus 142 ~i~-~~~~i~vIEDaA~a~Ga~~~g~~~---Gs~-----g--~a~fSF~~~K~it-tG-eGG~ivtnd~~l~~~~r~lr~ 208 (379)
T PRK11658 142 AIG-ERYGIPVIEDAAHAVGTYYKGRHI---GAR-----G--TAIFSFHAIKNIT-CA-EGGLIVTDDEELADRLRMLKF 208 (379)
T ss_pred HHH-HHCCCEEEECCHHHHCCCCCCCCC---CCC-----C--CEEEECCCCCCCC-CC-CCEEEEECCHHHHHHHHHHHH
T ss_conf 999-975981897083553665479866---762-----4--4578566666787-77-874999699999999999997
Q ss_pred C
Q ss_conf 2
Q gi|254780602|r 267 Q 267 (400)
Q Consensus 267 ~ 267 (400)
+
T Consensus 209 h 209 (379)
T PRK11658 209 H 209 (379)
T ss_pred C
T ss_conf 7
No 149
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.74 E-value=2.7e-17 Score=125.37 Aligned_cols=318 Identities=20% Similarity=0.258 Sum_probs=183.1
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 999999999998388756998778989999999986421013333223323345433332222222-3322322223333
Q gi|254780602|r 46 PENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPY 124 (400)
Q Consensus 46 p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~ 124 (400)
-+...+++.++++++....++- ..++-+++|+|+.- .+.+.++.++.||.+++.++ +.|||+||++.-+
T Consensus 14 ~~~e~~~v~~vl~sg~i~~G~~--v~~FE~~~ae~~G~--------k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~T 83 (374)
T COG0399 14 GEEELAAVQEVLKSGWLTGGPF--VRRFEQAFAEYLGV--------KYAVAVSSGTAALHLALLALAIGPGDEVIVPSFT 83 (374)
T ss_pred CHHHHHHHHHHHHCCCCCCCHH--HHHHHHHHHHHHCC--------CEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 4579999999996197416867--89999999998499--------7399966848999999996487999979936875
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 23222222222222222222222322210333100012212201211354210000123333211122333332011101
Q gi|254780602|r 125 WVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD 204 (400)
Q Consensus 125 y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D 204 (400)
|..-...+.+.|++|++++.+++. |.+|++.|+++|+++||+|+.++- -|.. .++++|.++| ++|+++||+|
T Consensus 84 fvATan~i~~~Ga~PVFvDid~~T-~nid~~~ie~aIt~~tKAIipVhl---~G~~---~dm~~i~~la-~~~~l~vIED 155 (374)
T COG0399 84 FVATANAVLLVGAKPVFVDIDPDT-LNIDPDLIEAAITPRTKAIIPVHL---AGQP---CDMDAIMALA-KRHGLPVIED 155 (374)
T ss_pred HHHHHHHHHHCCCEEEEEECCCCC-CCCCHHHHHHHCCCCCEEEEEEHH---CCCC---CCHHHHHHHH-HHCCCEEEEE
T ss_conf 398899999769967999647641-477999999871557749998512---1687---7989999999-8739849987
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCC---
Q ss_conf 22110-00001223322211123332257414654432234454442211-01226875310012223322222222---
Q gi|254780602|r 205 DIYEH-IVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWA--- 279 (400)
Q Consensus 205 e~Y~~-l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a--- 279 (400)
.+++. -.|.|++.-++... -++.++ -+|.+. +| --|.++. ++++.+++..++.+...... .-++-
T Consensus 156 aAqa~Ga~y~gk~vGt~Gd~------~~fSF~-~~K~it-tg-EGGav~tnd~ela~k~~~lr~hG~~~~~-~~~y~~~~ 225 (374)
T COG0399 156 AAQAHGATYKGKKVGSFGDI------GAFSFH-ATKNLT-TG-EGGAVVTNDEELAEKARSLRNHGLSRDA-VFKYLHEE 225 (374)
T ss_pred CCHHCCCEECCCCCCCCCCE------EEEEEC-CCCCCC-CC-CCEEEEECCHHHHHHHHHHHHHCCCCCC-CCCCEEEE
T ss_conf 60320672358425566646------899865-877655-66-7507983889999999999983767786-65643521
Q ss_pred ---------CCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-CCCCEEEEEECCCCCCCCCCCCCCCCCHH
Q ss_conf ---------22223467-64322222211000000024553047760330-27408998626410233211332248989
Q gi|254780602|r 280 ---------AVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI-PDGAFYLYPSCQDLIGKKSPSGDVIRTDL 348 (400)
Q Consensus 280 ---------~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~-p~g~~y~~~~~~~~~~~~~~~~~~~~~~~ 348 (400)
+.+++.-. -+.+++..+.-++..+...+.|++++++.... +.+..-.|--..-.... . ..+.
T Consensus 226 ~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~------~-~~~R 298 (374)
T COG0399 226 LGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDE------E-GISR 298 (374)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECC------C-CCCH
T ss_conf 33003877999999999998889999999999999999861078743357898761230366898267------7-7789
Q ss_pred HHHHHHHHHCCEE----EECCCCC------C-C-----C-------CEEEEEE--ECCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999873979----9835022------8-9-----9-------7289996--29999999999999999986
Q gi|254780602|r 349 DFVNGLLEIEKVA----VVQGSSF------G-H-----G-------PSIRISY--AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 349 ~~~~~Ll~~~gV~----v~pG~~F------g-~-----~-------~~iRis~--~~~~e~l~~al~rl~~~l~~ 398 (400)
+-....|++.||. ..|-... + . + ..+++-+ ..+++++++-++.|++++++
T Consensus 299 ~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 299 DALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 999999986787751663134432666504456667882288996174872589998999999999999998504
No 150
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.73 E-value=2.1e-17 Score=126.08 Aligned_cols=222 Identities=18% Similarity=0.191 Sum_probs=135.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 6998778989999999986421013333223323345433332222222332232222333323222222----222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMV----ALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~----~~~g~~ 138 (400)
.|+- .|.|- ++++-+.+...-| .+.-++++.+..|+.. +.+++++||+|++.+..|..-..++ ...|.+
T Consensus 43 ~Y~R-~~nPt-~~~lE~~la~LEg----~~~a~~~sSGmAAi~a-~la~~~~Gd~iv~~~~~Yg~t~~~~~~~l~~~GI~ 115 (379)
T PRK06176 43 EYSR-SGNPT-RFALEELIADLEG----GVKGFAFASGLAGIHA-VFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLS 115 (379)
T ss_pred CCCC-CCCHH-HHHHHHHHHHHHC----CCCEEECCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEE
T ss_conf 0408-98854-9999999999829----8653312557999999-99986899989981898887767459876447849
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. .|+++++++++++||+||+=+|.||+..+.+ +++|+++| +++++.+++|..+.--.+ +.
T Consensus 116 ~~~vd~-------~d~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~ia~ia-~~~gi~~vvDNT~atP~~----~~ 180 (379)
T PRK06176 116 CTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVA-KDHGLLTIVDNTFATPYY----QN 180 (379)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 998678-------6768899656877459999779998760158---58999999-976987997367215133----26
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211123332257414654432234454-4422110-122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|+++|.||.++--|== .|.++++ +++.+.+...+......+++...+.+...|+. +.-..+
T Consensus 181 Pl-~~--G---aDiVihS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~l~p~~a~ll~rGL~T----L~lR~~ 250 (379)
T PRK06176 181 PL-LL--G---ADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGIKT----LGLRME 250 (379)
T ss_pred HH-HH--C---CCEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC----HHHHHH
T ss_conf 23-41--8---98899954501147877402388349689999999999750777784678999722252----899999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
.-.++...+.+.|++.|.++
T Consensus 251 ~~~~nA~~vA~~L~~hp~V~ 270 (379)
T PRK06176 251 AHQKNALCVAEFLEKHPKVE 270 (379)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999987199826
No 151
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.73 E-value=9.1e-18 Score=128.28 Aligned_cols=201 Identities=20% Similarity=0.211 Sum_probs=136.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 8974988999999999998388756998778989999999986421013333223323345433332222222-332232
Q gi|254780602|r 39 GEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-VNMGDE 117 (400)
Q Consensus 39 G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~ 117 (400)
+.|++ .+.=.+++.++++.+....++ -..++-+.+++|+...+ .+.++.++.||.+++.++ +.|||+
T Consensus 4 ~~p~i--~~~e~~~v~~~l~s~~~~~G~--~v~~fE~~~~~~~g~k~--------~v~~~sgT~AL~lal~al~~~~gde 71 (380)
T TIGR03588 4 GRQSI--DQDDIDAVVEVLKSDFLTQGP--TVPAFEEALAEYVGAKY--------AVAFNSATSALHIACLALGVGPGDE 71 (380)
T ss_pred CCCCC--CHHHHHHHHHHHHCCCCCCCH--HHHHHHHHHHHHHCCCE--------EEEECCHHHHHHHHHHHCCCCCCCE
T ss_conf 89999--999999999998479866897--69999999999978594--------9997588999999999849999899
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC----CCCCCEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222333323222222222222222222222322210333100012----2122012113542100001233332111223
Q gi|254780602|r 118 VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT----PKTKWLFLNSPSNPSGVVYSQNRLRALADVL 193 (400)
Q Consensus 118 Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~----~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~ 193 (400)
||+|+-+|..-...+..+|++|+.++++++ .|.+|+++++++|+ ++||+|+.++- -|.. .++++|.++|
T Consensus 72 Vivp~~tf~at~~ai~~~Ga~pvf~Dvd~~-t~~id~~~l~~~it~~~~~ktkaIi~vh~---~G~~---~d~~~i~~ia 144 (380)
T TIGR03588 72 VWTTPITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPVDF---AGKS---VDMQAIAALA 144 (380)
T ss_pred EEECCCCCHHHHHHHHHCCCEEEEEECCHH-HCCCCHHHHHHHHHHCCCCCCEEEEEECC---CCEE---CCHHHHHHHH
T ss_conf 996785308867999987996899844100-01489888777776436777259999489---8543---4899999999
Q ss_pred CCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCC
Q ss_conf 33332011101221100-000122332221112333225741465--4432234454442211-012268753100122
Q gi|254780602|r 194 VRNPHVHIISDDIYEHI-VYRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYAAG-ALSLIKSMIVLQGQQ 268 (400)
Q Consensus 194 a~~~~i~ii~De~Y~~l-~~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~v~-~~~li~~l~~~~~~~ 268 (400)
+++++.||+|.+.+.- .|.+...-+. ...+ +.+.|| +|.++ +| --|.+++ ++++.+.+..++.+.
T Consensus 145 -~~~~i~lIEDaA~a~Ga~~~gk~~Gs~-----~~gd--~~~fSF~~~K~it-tG-eGG~i~tnd~~l~~~~r~lr~~G 213 (380)
T TIGR03588 145 -KKHGLKIIEDASHALGAEYGGKPVGNC-----RYAD--ATVFSFHPVKIIT-TA-EGGAVTTNDEELAERMRLLRSHG 213 (380)
T ss_pred -HHCCCEEEEECCCHHCCCCCCCCCCCC-----CCCC--EEEEECCCCCCCC-CC-CCEEEEECCHHHHHHHHHHHHCC
T ss_conf -986988999880011577578765664-----4352--4677335555577-78-85399969999999999999769
No 152
>PRK07505 hypothetical protein; Provisional
Probab=99.73 E-value=6.8e-17 Score=122.97 Aligned_cols=329 Identities=12% Similarity=0.114 Sum_probs=175.4
Q ss_pred HCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589-7498899999999999838875---69987789899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGE-PDFDMPENVKYAVVRAMERGET---KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~---~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+++++|+..+ -++...|.++++..+++++--. +=.-..|..++-+.+=+.+.+.+| +|-+++++|. .+
T Consensus 46 ~dGr~~lnF~SndYLGL~~hp~v~~aa~~a~~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g----~eal~f~sg~-~A 120 (405)
T PRK07505 46 TDGKEFVNFVSCSYLGLDNHPAIIDGAVDALRRTGVLDLSSSRTRVQSQILKDLEESLSELFG----ASVLTFTSCS-AA 120 (405)
T ss_pred ECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC----CCEEEECCHH-HH
T ss_conf 389789750435535888999999999999998688987648641483999999999998739----8779873268-99
Q ss_pred CCCCCCCCC------CCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECC
Q ss_conf 322222223------3223222233332322222-----22222222222222223222103331000122122012113
Q gi|254780602|r 104 IFNALMATV------NMGDEVLIPRPYWVSYPDM-----VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNS 172 (400)
Q Consensus 104 l~~~~~~~~------~~Gd~Vlv~~P~y~~y~~~-----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~n 172 (400)
...++.+++ +++|.++.-. .+|.++ +...+++++.++ +-|++.|++......+.++++-
T Consensus 121 n~g~i~~Lasg~~~~~~~~~ii~D~---~~HaSl~~~~g~~~s~a~~~~f~-------HnD~~~Le~~~~~~~~~~iV~E 190 (405)
T PRK07505 121 HLGILPLLASGHLTGGKPPHMVFDK---YAHASLAILKGICADETEVETID-------HNDLDALEDICKTNKRVAYVAD 190 (405)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEEC---CCCCCHHHHHHHHCCCCCEEEEC-------CCCHHHHHHHHHHCCCCEEEEE
T ss_conf 9999999972222489987899987---64378455667754899689867-------9999999998745699489998
Q ss_pred C--CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 5--421000012333321112233333201110122110000012233222--111233322574146544322344544
Q gi|254780602|r 173 P--SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV--NVEPSLYERTLVVNGVSKAYAMTGLRI 248 (400)
Q Consensus 173 P--~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~--~~~~~~~~~~i~~~S~SK~~~~~G~Ri 248 (400)
- +- |-+. .+.+|+++| ++|+.+++.||+|+.-+++. ....+. .+.....++.|.+.||||.|+..|
T Consensus 191 gVfSM--GdiA---pL~~l~~L~-~~y~a~L~vDEAH~~Gv~G~-~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~G--- 260 (405)
T PRK07505 191 GVYSM--GGIA---PVKELVDLQ-DKYGLFVYIDDAHGLSIYGK-NGEGYVRSELDYRLNERTIIATSLGKAFGASG--- 260 (405)
T ss_pred EEECC--CCHH---HHHHHHHHH-HHCCEEEEEECCCEECCCCC-CCCCCHHHHHCCCCCCEEEEEEECCCHHCCCC---
T ss_conf 42558--9834---599999998-75676999965210012059-99723168757888841799800321001561---
Q ss_pred CCCC-CHHHHHHHHHHH-CCCCCCCCCCCCCCCC-CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCE
Q ss_conf 4221-101226875310-0122233222222222-222346-76432222221100000002455304776033027408
Q gi|254780602|r 249 GYAA-GALSLIKSMIVL-QGQQTSGACSIAQWAA-VEALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAF 324 (400)
Q Consensus 249 G~~v-~~~~li~~l~~~-~~~~~~~~~~~~q~a~-~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~ 324 (400)
||++ +++++++-+... +.+..+.+.++.+.++ .+.++- ..+...+.++.++++.+++.+.+.. ....++ +-
T Consensus 261 G~V~~g~~~~~~~l~~~ar~~ifStal~p~~~aa~~as~~i~~~~e~~~~~~~L~~ni~~~~~~l~~----~~~~s~-~p 335 (405)
T PRK07505 261 GVIMLGYAEQIRLILRYAGPYAFSQPLNVAALGAISASAEIHLSSELDQLQQKLHNNIALFDSLIPT----EQSGSF-LP 335 (405)
T ss_pred EEEEECCHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC----CCCCCC-CC
T ss_conf 5999785999999997184111366447999999999999985754799999999999999974587----778999-98
Q ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCC--EEEEEEE--CCHHHHHHHHHHHHHHHHH
Q ss_conf 998626410233211332248989999999987397998350228--997--2899962--9999999999999999986
Q gi|254780602|r 325 YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGP--SIRISYA--VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 325 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~--~iRis~~--~~~e~l~~al~rl~~~l~~ 398 (400)
-+.+-+.+ .....++++.|+ +.|+.+.|-. |- +.+ -+||++. .+++++++.++.|++.++.
T Consensus 336 I~~v~ig~-----------~~~a~~~~~~L~-e~Gi~v~~i~-~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~v~~e 402 (405)
T PRK07505 336 IRLIYIGD-----------EDTAIKYAKQLK-DAGFYTSPVF-FPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKEILAD 402 (405)
T ss_pred EEEEEECC-----------HHHHHHHHHHHH-HCCCCEEEEE-CCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 79999499-----------999999999999-7890187563-8838979824998748889999999999999999998
Q ss_pred C
Q ss_conf 0
Q gi|254780602|r 399 L 399 (400)
Q Consensus 399 l 399 (400)
+
T Consensus 403 ~ 403 (405)
T PRK07505 403 Y 403 (405)
T ss_pred H
T ss_conf 5
No 153
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.73 E-value=3.6e-17 Score=124.64 Aligned_cols=287 Identities=19% Similarity=0.281 Sum_probs=166.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.|- ++++.+.+...-| .+.-++++.+..|+.. +..++++||+|+++.+.|..-... ....|.+
T Consensus 45 ~Y~R-~~nPt-~~~le~~la~LEg----~~~a~~f~SGmaAi~~-~l~~l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~ 117 (366)
T PRK08247 45 DYSR-TKNPT-RGLLEQAIADLEG----GDQGFACSSGMAAIQL-VMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWGVR 117 (366)
T ss_pred CCCC-CCCHH-HHHHHHHHHHHHC----CCCEEECCCHHHHHHH-HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEE
T ss_conf 1418-99867-9999999999829----8505311668999999-99973899989995896864889988775077469
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|+++++++++++||+||+=+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +.
T Consensus 118 ~~~~d~-------~d~~~~~~~i~~~Tkli~~Esp~NP~l~v~D---i~~i~~iA-~~~g~~~vvDNT~atP~~----~~ 182 (366)
T PRK08247 118 FVYVNT-------ASIKAIEQAITPNTKAIFIETPTNPLMQETD---IAAIAKIA-KKHGLLLIVDNTFYTPVL----QR 182 (366)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCEEEECCCCCCCCC----CC
T ss_conf 998488-------8979999753867549998559998535015---99999998-646704984177344133----57
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222111233322574146544322344-544422110-122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--| .=.|.++++ +++.+++...+......+++...+.+...|+. +.-..+
T Consensus 183 Pl-~~--G---aDivihS~TKyi~GhsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rGl~T----L~lR~~ 252 (366)
T PRK08247 183 PL-TE--G---ADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKT----LALRMR 252 (366)
T ss_pred CH-HC--C---CCEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 41-02--8---97899742420158887154799727388888999999733667793777788635250----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE-EEEC-CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCE-------------E
Q ss_conf 11000000024553047760-3302-7408998626410233211332248989999999987397-------------9
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR-YMIP-DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKV-------------A 361 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~-~~~p-~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV-------------~ 361 (400)
+-.++...+.+.|++.|.++ +.-| .||++-| ++.+ .+.+..+++.-.+ +
T Consensus 253 ~~~~nA~~lA~~L~~hp~V~~V~yPG~gg~~sf-~l~~---------------~~~~~~f~~~l~l~~~a~SlGg~eSLi 316 (366)
T PRK08247 253 QHEENAKALAAFLNEQPGVTDVLYPGKGGMLSF-RLQD---------------EEWVNPFLKSLKLITFAESLGGVESFI 316 (366)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEE-EECC---------------HHHHHHHHHHCCCCEEECCCCCCCCEE
T ss_conf 999999999999861997048956998777999-9788---------------899999998474366812657677244
Q ss_pred EECCC----CC--------C-CCCEEEEEEEC-CHHHHHHHHHHHHHHHHHCC
Q ss_conf 98350----22--------8-99728999629-99999999999999998609
Q gi|254780602|r 362 VVQGS----SF--------G-HGPSIRISYAV-SDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 362 v~pG~----~F--------g-~~~~iRis~~~-~~e~l~~al~rl~~~l~~l~ 400 (400)
..|.+ .+ | .++.||+|++. +.|+| ++-|.++|+++|
T Consensus 317 ~~pa~~th~~~~~~~r~~~Gi~~~liRlSvGLEd~~DL---i~Dl~qAL~~i~ 366 (366)
T PRK08247 317 TYPATQTHMDIPEEIRIANGVCNRLLRFSVGIENVEDL---KADLKQAFKQVK 366 (366)
T ss_pred ECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHH---HHHHHHHHHHCC
T ss_conf 57642454228999999759892959999500899999---999999999539
No 154
>KOG1412 consensus
Probab=99.73 E-value=2.5e-18 Score=131.69 Aligned_cols=356 Identities=15% Similarity=0.183 Sum_probs=210.7
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCEEECCCC-------CCCCCCCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHH
Q ss_conf 7389758999999999999869972665658-------9749889999999999983887--569987789899999999
Q gi|254780602|r 9 RRVQPSATLVAAQRVRDLRSKGIDVLCLTAG-------EPDFDMPENVKYAVVRAMERGE--TKYTAVAGISPLREAIVE 79 (400)
Q Consensus 9 ~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G-------~p~~~~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR~aia~ 79 (400)
...+|-..+.+.+...+.... .=++|++| .|-. -|.|+++-.+..++.. +.|-|..|++.++++-++
T Consensus 10 ~~a~p~~vf~~~~~y~~d~~p--~KvnL~igAYRtd~g~PWv--LPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~e 85 (410)
T KOG1412 10 PVAPPIEVFKLNASYGEDLDP--VKVNLGIGAYRTDDGKPWV--LPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATE 85 (410)
T ss_pred CCCCHHHHHHHHHHHCCCCCC--CEEECCCCEEECCCCCEEE--EHHHHHHHHHCCCCHHCCCHHCCCCCCHHHHHHHHH
T ss_conf 547738888657775215775--0550221047748898667--535543112036740105111331486356666587
Q ss_pred HHHHHCCCCCCCCCCC--CCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCH
Q ss_conf 8642101333322332--3345433332222---22233223222233332322222222222222-2222222322210
Q gi|254780602|r 80 KFRRDNDLHYTSDQII--VGTGAKHVIFNAL---MATVNMGDEVLIPRPYWVSYPDMVALCGGIPV-FVDTQQDDNFQVS 153 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~--it~G~~~~l~~~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~-~v~~~~~~~~~~d 153 (400)
-+-...-.-+..+++. -+-+++.++.... ..+++ ...|-+..|+|.++..+++.+|.+-+ .++.-..+.-.+|
T Consensus 86 l~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~-~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d 164 (410)
T KOG1412 86 LLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYN-KNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVD 164 (410)
T ss_pred HHCCCCCHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCC-CCEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCCEEC
T ss_conf 700788534332211202421565324566788887524-6526743886067788998738844556663157771213
Q ss_pred HHHHHCCCCCCC-CCE-EECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf 333100012212-201-2113-5421000012333321112233333201110122110000012233222111--2333
Q gi|254780602|r 154 PEKLEQAITPKT-KWL-FLNS-PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE--PSLY 228 (400)
Q Consensus 154 ~~~l~~~i~~~~-k~i-~l~n-P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~--~~~~ 228 (400)
++.+.+.+...+ +.+ +|+. .|||||.--++|.+.+|++.. ++.+++.+.|-+|..|.-++... ..+++. -+..
T Consensus 165 ~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vi-k~k~lf~fFDiAYQGfASGD~~~-DawAiR~fV~~g 242 (410)
T KOG1412 165 LEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVI-KSKNLFPFFDIAYQGFASGDLDA-DAWAIRYFVEQG 242 (410)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEHHHCCCCCCCCCC-CHHHHHHHHHCC
T ss_conf 9999989863898737862001369878997889999999999-74476035420210124699541-089999999618
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCC--C-HHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCC---CCC
Q ss_conf 225741465443223445444221--1-01226----87531001222332222222222223467---64322---222
Q gi|254780602|r 229 ERTLVVNGVSKAYAMTGLRIGYAA--G-ALSLI----KSMIVLQGQQTSGACSIAQWAAVEALNGP---QDFVV---NNR 295 (400)
Q Consensus 229 ~~~i~~~S~SK~~~~~G~RiG~~v--~-~~~li----~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~---~~~ 295 (400)
...++..||+|.|++.|-|+|-+. . ++..+ .+|..+.-...++++.....++.+.|+.+ ++|.. .+-
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Ms 322 (410)
T KOG1412 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMS 322 (410)
T ss_pred CEEEEEHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 73887766564316646553636999447557777887779988612678851145899998468888999999999999
Q ss_pred CCCCCCCCCHHHHHHCC--CC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 21100000002455304--77-6033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGV--PG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~--~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
.+.++.|..+.+.|..+ || +.-+.-|-|||-|--+ ++. -++.|.+++.|.+.+- |
T Consensus 323 sRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGL---------------tp~-qV~~li~~h~vyLl~~------G 380 (410)
T KOG1412 323 SRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGL---------------TPA-QVDHLIENHKVYLLSD------G 380 (410)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEECCC---------------CHH-HHHHHHHHCEEEEECC------C
T ss_conf 99999999999999861899857788765051431489---------------989-9999987363899438------8
Q ss_pred EEEEEEE-CCH---HHHHHHHHHHHHH
Q ss_conf 2899962-999---9999999999999
Q gi|254780602|r 373 SIRISYA-VSD---AILEEACVRIKRF 395 (400)
Q Consensus 373 ~iRis~~-~~~---e~l~~al~rl~~~ 395 (400)
||+++ ... |-+.+|++---++
T Consensus 381 --RInisGLN~~NveyVAkAIde~Vr~ 405 (410)
T KOG1412 381 --RINISGLNMKNVEYVAKAIDETVRA 405 (410)
T ss_pred --CEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf --3766145654589999999999975
No 155
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=4.3e-17 Score=124.17 Aligned_cols=223 Identities=16% Similarity=0.160 Sum_probs=144.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222----22222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.++.||..++.+++.+||+|++.+..|..-.. .+...|.+
T Consensus 54 ~YsR-~~NP-T~~~lE~~la~LEg----g~~a~~~~SGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~ 127 (394)
T PRK09028 54 FYGR-RGTP-THFAFQAAIAELEG----GAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILAGFGIE 127 (394)
T ss_pred EEEC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCEE
T ss_conf 7779-9887-79999999999819----9877984599999999999984799878706998627799999888656747
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|.++++++++++||+||+-+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ ..
T Consensus 128 v~~vd~-------~~~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~~ 192 (394)
T PRK09028 128 TTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIA-HEHDIVVMLDNTWASPIN----SR 192 (394)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCEEEECCCCCCHHC----CC
T ss_conf 999579-------9989998536877269999558998752368---99999999-983987996376431220----68
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222111233322574146544322344-5444221101226875310012223322222222222234676432222221
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKI 297 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 297 (400)
++ .+ + --|+++|.||.++--| .=.|.++++++..+++.........++++...+.++..|+. +.-..++
T Consensus 193 Pl-~~--G---aDivvhS~TKyi~GHsDv~~G~v~~~~~~~~~l~~~~~~~G~~~sP~~a~L~lRGL~T----L~lRm~r 262 (394)
T PRK09028 193 PF-EM--G---VDISIQAATKYIVGHSDVMLGTATANEKHWDQLREQSYLMGQCTSPDDVYLAARGLRT----LGVRLAQ 262 (394)
T ss_pred CH-HC--C---CCEEEEECCCEECCCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC----HHHHHHH
T ss_conf 21-20--7---9889982770104887740316746889999999999871677887899999836785----9999999
Q ss_pred CCCCCCCHHHHHHCCCCCE
Q ss_conf 1000000024553047760
Q gi|254780602|r 298 FEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 298 ~~~~r~~~~~~L~~~~g~~ 316 (400)
-.++...+.+.|++.|.++
T Consensus 263 ~~~nA~~vA~~L~~hp~V~ 281 (394)
T PRK09028 263 HEKNALKVANWLATRPEVD 281 (394)
T ss_pred HHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999986099987
No 156
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.8e-17 Score=126.52 Aligned_cols=223 Identities=16% Similarity=0.173 Sum_probs=143.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.|- ++++.+.+....| .+.-++++.+..||..++.+++.+||+|+++++.|..-... +...|.+
T Consensus 58 ~Y~R-~~nPT-~~~lE~~la~LEg----~~~a~~~sSGmaAi~~~ll~ll~~Gd~vv~~~~~Yg~T~~~~~~~l~~~Gi~ 131 (394)
T PRK07050 58 RYGL-HATPT-SLALAQRLAEIEG----GRHALLQPSGLAAISNVYFGLVKAGDDVLIPDNVYGPNRDFGEWLAKDFGIT 131 (394)
T ss_pred EEEC-CCCHH-HHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEE
T ss_conf 2558-88865-9999999999829----9749996578999999999960799857835666333899999875318879
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. .|+++++++++++||+||+=+|.|||-.+.+ +++|+++| +++++++++|..+.--.+ ..
T Consensus 132 v~f~d~-------~d~~~~~~~i~~~Tkli~~Esp~NP~l~v~D---i~~ia~~A-~~~g~~~vVDNT~atP~~----~~ 196 (394)
T PRK07050 132 VRFYDP-------MIGAGIADLIQPNTRLIWLEAPGSVTMEVPD---VPAITAAA-RARGVVTAIDNTWSAGLA----FK 196 (394)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---HHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 999799-------9989998436866449998448987625437---29999999-875986998578668650----06
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211123332257414654432234454-44221-10122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAA-GALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v-~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.+|.++--|=- .|.++ .++++.+++...+.....++++...+.++..|+. +.-..+
T Consensus 197 Pl-~~--G---aDiVihS~TKyi~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sp~~a~l~~rGL~T----L~lRm~ 266 (394)
T PRK07050 197 PF-EH--G---VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPS----MQVRFD 266 (394)
T ss_pred CC-CC--C---CCEEEEECCEEECCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 31-04--6---98999506634437888767736569999999999999862677898999999748984----788899
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.++
T Consensus 267 r~~~nA~~lA~~L~~hp~V~ 286 (394)
T PRK07050 267 AHSRSALELAQWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHCCCEE
T ss_conf 99999999999986189810
No 157
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=3.5e-17 Score=124.70 Aligned_cols=223 Identities=19% Similarity=0.242 Sum_probs=138.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 5699877898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG 137 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~ 137 (400)
+.|+-. |.| .++++.+.+...-| .+.-++++.+..|+..++. ++.+||+|+++...|..-... +...|.
T Consensus 46 y~Y~R~-~nP-T~~~Le~~la~LE~----~~~a~~~~SGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi 118 (390)
T PRK08064 46 YDYSRS-GNP-TREALEDIIAELEG----GTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGI 118 (390)
T ss_pred CEEECC-CCH-HHHHHHHHHHHHHC----CCCEEEHHHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHCCCE
T ss_conf 035489-886-69999999999829----9765502339999999999-8679999998488856799999867650987
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. .|+++++++++++||+||+=+|.|||..+.+ +++|+++| +++++++++|..+.--.+ +
T Consensus 119 ~~~f~d~-------~d~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~i~~iA-~~~g~~~vVDNT~atP~~----~ 183 (390)
T PRK08064 119 EHTFVDM-------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLA-KAHGCLTFVDNTFLTPLL----Q 183 (390)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CHHHHHHH-HHCCCEEEEECCCCCCCC----C
T ss_conf 9999788-------5737799747888459999789998874127---19999999-883996997377335043----6
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3222111233322574146544322344-5444221-1012268753100122233222222222222346764322222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAA-GALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v-~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
.++ .+ + --|++.|+||.++--| .=.|.++ .++++.+.+...+......+++...+.++..|+. +.-..
T Consensus 184 ~Pl-~~--G---aDivihS~TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~~~~G~~l~p~~a~l~lrgl~T----L~lRm 253 (390)
T PRK08064 184 KPL-DL--G---ADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLVLRGLKT----LHVRL 253 (390)
T ss_pred CHH-HH--C---CCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC----HHHHH
T ss_conf 857-74--8---86999963631158876404168617889999999999850776790567898725686----88999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
++-.++...+.+.|++.|.++
T Consensus 254 ~~~~~nA~~iA~~L~~hp~V~ 274 (390)
T PRK08064 254 EHSAATANKIAQYLQEHPKVQ 274 (390)
T ss_pred HHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999997199906
No 158
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=3.2e-17 Score=124.98 Aligned_cols=223 Identities=16% Similarity=0.209 Sum_probs=139.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++.+..|..-... +...|.+
T Consensus 51 ~YsR-~~nP-T~~~le~~la~LEg----~~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~ 124 (386)
T PRK07811 51 EYAR-TGNP-TRTALEEQLAALEG----GKYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVE 124 (386)
T ss_pred CCCC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf 1539-9886-79999999999849----9878983339999999999983899989937876521999999998735804
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|+++++++++++||+||+-+|.|||..+.+ +++|+++| +++++.+|+|..+.--.+ +.
T Consensus 125 ~~~vd~-------~d~~~~~~~i~~~Tkli~~Esp~NP~l~v~D---i~~i~~ia-~~~g~~~vVDNT~atP~~----~~ 189 (386)
T PRK07811 125 YTPVDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAAIAELA-HDAGAKVVVDNTFASPYL----QQ 189 (386)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---CHHHHHHH-HHCCCEEEEECCCCCCCE----EC
T ss_conf 997788-------7878898655888349999779998764058---58999999-855781883167335204----25
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222111233322574146544322344544-42211-0122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--|=-+ |.+++ ++++.+.+...+.....++++...+.++..|+. +.-..+
T Consensus 190 Pl-~~--G---aDiVvhS~TKyl~GHsDvl~G~vv~~~~~~~~~~~~~~~~~G~~~sP~~a~l~lrGL~T----L~lRm~ 259 (386)
T PRK07811 190 PL-AL--G---ADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQNGAGAVPGPFDAYLTMRGLKT----LAVRMD 259 (386)
T ss_pred HH-HH--C---CCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH----HHHHHH
T ss_conf 23-40--7---98799734440057877242478608289999999999742787885788899865736----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.++
T Consensus 260 ~~~~nA~~lA~~L~~hp~V~ 279 (386)
T PRK07811 260 RHSENAEAVAEFLDGHPEVS 279 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999997299837
No 159
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=9.5e-17 Score=122.08 Aligned_cols=224 Identities=15% Similarity=0.193 Sum_probs=146.4
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 699877-898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r 63 KYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG 137 (400)
Q Consensus 63 ~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~ 137 (400)
+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++.+..|..-... +...|.
T Consensus 55 ~y~Y~R~~NP-T~~~lE~~la~LEg----g~~a~~~sSGmaAi~~~ll~~l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi 129 (392)
T PRK05967 55 KYTYGTRGTP-TTDALCKAIDALEG----SAGTILVPSGLAAVTVPLLGFLSAGDHALIVDSVYYPTRHFADTMLKRLGV 129 (392)
T ss_pred CCEEECCCCH-HHHHHHHHHHHHCC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCE
T ss_conf 9304589887-79999999999809----987799457799999999997389988994489844589999998763686
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. -|.++++++++++||+||+-+|.|||..+.+ +++|+++| +++++.+|+|..+.--.+ .
T Consensus 130 ~v~~vd~-------~~~~~~~~~i~~~Tklv~~Etp~NP~l~v~D---i~~ia~~A-~~~g~~~vVDNTfatP~~----~ 194 (392)
T PRK05967 130 EVEYYDP-------EIGAGIEKLMRPNTKVVFTESPGSNTFEIQD---IPAIAEAA-HRHGAIVMMDNTWATPLY----F 194 (392)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---HHHHHHHH-HHCCCEEEEECCCCCCCE----E
T ss_conf 9999889-------9999999744878659998558998645535---49999999-876987996177545342----1
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3222111233322574146544322344-544422110122687531001222332222222222223467643222222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
.++ .+ + --|++.|.+|.++--| .=.|.++++++.++++...+.....+++++..+.++..|+. +.-..+
T Consensus 195 ~Pl-~~--G---ADiVvhS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~~~G~~l~P~~a~l~lrGl~T----L~lRm~ 264 (392)
T PRK05967 195 RPL-DF--G---VDISIHAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRT----MGIRLE 264 (392)
T ss_pred CCC-CC--C---CCEEEEECCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCH----HHHHHH
T ss_conf 456-55--6---8689996664666887520432337778889999998750466797888998717760----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.++
T Consensus 265 r~~~nA~~lA~~L~~hp~V~ 284 (392)
T PRK05967 265 HHRKSALEIARWLEGRPMVA 284 (392)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99998999999997199976
No 160
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.71 E-value=9.1e-18 Score=128.28 Aligned_cols=193 Identities=21% Similarity=0.293 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 9999999999838875-6998778989999999986421013333223323345433332222222-3322322223333
Q gi|254780602|r 47 ENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPY 124 (400)
Q Consensus 47 ~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~ 124 (400)
+.-.+++.+.++++.. ++++. ..++.+.+++|+...+ .+.++.++.||.++++++ +.+||+||+|.-+
T Consensus 5 ~~~~~~v~~~l~s~~~~~~G~~--v~~fE~~~~~~~g~k~--------~v~~~sgT~Al~lal~a~~~~~gdeVi~p~~t 74 (363)
T pfam01041 5 EEELAAVTEVLRSGWLTTGGPE--VREFEKEFAAYLGVKH--------AVAVSSGTAALHLALRALGIGPGDEVIVPSFT 74 (363)
T ss_pred HHHHHHHHHHHHCCCCCCCCHH--HHHHHHHHHHHHCCCE--------EEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 8999999999973981479989--9999999999978495--------99975889999999998598892999979977
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 23222222222222222222222322210333100012212201211354210000123333211122333332011101
Q gi|254780602|r 125 WVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD 204 (400)
Q Consensus 125 y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D 204 (400)
|+.-...+..+|++|+.++++++ .|.+|+++++++++++||+|++++. -|.. .++++|.++| +++++.||+|
T Consensus 75 ~~at~~ai~~~G~~pvf~Dvd~~-t~~id~~~l~~~i~~~tkaIi~vh~---~G~~---~d~~~i~~~~-~~~~i~lIED 146 (363)
T pfam01041 75 FVATANAVLYLGAKPVFVDIDPD-TYNIDPAAIEAAITPRTKAIMPVHL---YGQP---ADMDAIRAIA-AEHGLPVIED 146 (363)
T ss_pred CHHHHHHHHHCCCEEEEEECCCC-CCCCCHHHHHHHCCCCCCEEEEECC---CCCC---CCHHHHHHHH-HHCCCEEEEE
T ss_conf 59889999986997998506456-5685899999860758709998789---8986---8999999999-9849999973
Q ss_pred CCCCCCC-CCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCC
Q ss_conf 2211000-00122332221112333225741465--44322344544422110-12268753100122
Q gi|254780602|r 205 DIYEHIV-YRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYAAGA-LSLIKSMIVLQGQQ 268 (400)
Q Consensus 205 e~Y~~l~-~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~v~~-~~li~~l~~~~~~~ 268 (400)
.+++.-. |.+.. +.+.. + +.+.|| +|.++ +|- -|.++.+ +++.+.++.++.+.
T Consensus 147 aA~a~Ga~~~gk~---~G~~g----d--~~~fSF~~~K~it-tGe-GG~i~tnd~~l~~~~r~lr~~G 203 (363)
T pfam01041 147 AAHAHGATYKGKR---VGTFG----D--AATFSFFPTKNIT-TGE-GGAVVTDDPELAERARCLRNHG 203 (363)
T ss_pred CCCCCCCCCCCEE---CCCCC----C--CCEEECCCCCCCC-CCC-CEEEEECCHHHHHHHHHHHHCC
T ss_conf 1320267658654---35644----5--2102057876544-689-7099969999999999999659
No 161
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.71 E-value=2.7e-17 Score=125.41 Aligned_cols=200 Identities=19% Similarity=0.282 Sum_probs=136.2
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-
Q ss_conf 665658974988999999999998388756-998778989999999986421013333223323345433332222222-
Q gi|254780602|r 34 LCLTAGEPDFDMPENVKYAVVRAMERGETK-YTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT- 111 (400)
Q Consensus 34 i~l~~G~p~~~~p~~i~~a~~~al~~~~~~-Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~- 111 (400)
|+++ .|++ .+.-.+++.++++.+... -++ -..++-+++++|+... +.+.++.++.||.+++.++
T Consensus 2 Ip~~--~p~~--~~~e~~~v~~~l~sg~~~~~G~--~v~~fE~~~a~~~g~~--------~av~v~sgT~AL~lal~~l~ 67 (375)
T PRK11706 2 IPFN--KPPV--VGTELDYIQEAMSSGKLSGDGG--FTRRCQQWLEQRFGCA--------KVLLTPSCTAALEMAALLLD 67 (375)
T ss_pred CCCC--CCCC--CHHHHHHHHHHHHCCCCCCCCH--HHHHHHHHHHHHHCCC--------EEEEECCHHHHHHHHHHHCC
T ss_conf 5778--9999--9899999999997098768997--9999999999997849--------39996788999999999869
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33223222233332322222222222222222222232221033310001221220121135421000012333321112
Q gi|254780602|r 112 VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALAD 191 (400)
Q Consensus 112 ~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~ 191 (400)
+.+||+||+|+-+|..-...+..+|++|+.++.+++ .|.+|++.++++|+++||+|+.++- -|.. .++++|.+
T Consensus 68 i~~gdeVivp~~tf~at~~ai~~~Ga~pvfvDid~~-t~~id~~~ie~~it~ktkaIi~Vh~---~G~~---~d~~~I~~ 140 (375)
T PRK11706 68 IQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPVHY---AGVA---CEMDTIMA 140 (375)
T ss_pred CCCCCEEEECCCCHHHHHHHHHHCCCEEEEEEECCC-CCCCCHHHHHHHHCCCCEEEEEECC---CCCC---CCHHHHHH
T ss_conf 889399998996649999999983996999971687-5776789999870867549999678---8986---67899999
Q ss_pred CCCCCCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCC-HHHHHHHHHHHCC
Q ss_conf 2333332011101221100-000122332221112333225741465--4432234454442211-0122687531001
Q gi|254780602|r 192 VLVRNPHVHIISDDIYEHI-VYRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYAAG-ALSLIKSMIVLQG 266 (400)
Q Consensus 192 ~~a~~~~i~ii~De~Y~~l-~~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~v~-~~~li~~l~~~~~ 266 (400)
+| +++++.||+|.+++.- .|+|... .+.. .+.+.|| +|.++. | --|.++. ++++.+++..++.
T Consensus 141 ia-k~~~i~vIEDaA~a~Gs~~~g~~~---Gt~G------d~~~fSF~~~K~itt-G-eGG~i~tnd~~l~~~~~~lr~ 207 (375)
T PRK11706 141 LA-KKHNLFVVEDAAQGVMSTYKGRAL---GTIG------HLGCFSFHETKNYTA-G-EGGALLINDPALIERAEIIRE 207 (375)
T ss_pred HH-HHCCCEEEECCCCCCCCCCCCEEC---CCCC------CCCCCCCCCCCCCCC-C-CCEEEEECCHHHHHHHHHHHH
T ss_conf 88-537908983440036876676445---7679------988858988987877-6-874999799999999999998
No 162
>PRK05968 hypothetical protein; Provisional
Probab=99.71 E-value=9.1e-17 Score=122.17 Aligned_cols=233 Identities=17% Similarity=0.173 Sum_probs=144.7
Q ss_pred HHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999838875699877-898999999998642101333322332334543333222222233223222233332322222
Q gi|254780602|r 53 VVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM 131 (400)
Q Consensus 53 ~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~ 131 (400)
+.+.......+|.-++ |.| .++++.+.+...-| .+.-+.++.++.||..++.+++++||+|++.+..|..-..+
T Consensus 44 ~~~~~~~~~~g~~YsR~~NP-T~~~lE~~la~LEg----g~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l 118 (389)
T PRK05968 44 MEAVYAGETVRPIYTRGDNP-TVRAFEEMLAKLEG----AEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRL 118 (389)
T ss_pred HHHHHCCCCCCCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHH
T ss_conf 99874688679614289886-69999999999829----96388854889999999999608999898588766758999
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ----2222222222222222322210333100012212201211354210000123333211122333332011101221
Q gi|254780602|r 132 ----VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 132 ----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
+...|.++.+++. -|.+.+++++ ++||+||+-+|.|||..+.+ +++|+++ ++++++.+++|..+
T Consensus 119 ~~~~l~~~GI~v~~vd~-------~d~~~~~~~i-~~Tklv~~EtpsNP~l~v~D---I~~ia~i-A~~~g~~~vVDNTf 186 (389)
T PRK05968 119 FGTLLKRMGVEVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFELQD---IAALAAL-AKRHGVVTVIDNSW 186 (389)
T ss_pred HHHHHHCCCCEEEEECC-------CCHHHHHHCC-CCCCEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCC
T ss_conf 99888607846999689-------9999999627-68728999789998872738---9999999-99839959997786
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCC
Q ss_conf 100000122332221112333225741465443223445-4442211012268753100-12223322222222222234
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGALSLIKSMIVLQ-GQQTSGACSIAQWAAVEALN 285 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~~~li~~l~~~~-~~~~~~~~~~~q~a~~~~l~ 285 (400)
.--.+ ..++ .+ + --|++.|.||.++--|- =.|.++++++.+.++.... .....++++...+.++..|+
T Consensus 187 atP~~----~~Pl-~~--G---aDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~lG~~lsP~~a~l~lRGL~ 256 (389)
T PRK05968 187 ASPVF----QRPI-TL--G---VDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGGKLSPFEAWLLLRGLR 256 (389)
T ss_pred CHHHH----CCHH-HH--C---CCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 11642----5842-40--7---9879970453446898844269945699999999999986277788588899984798
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 6764322222211000000024553047760
Q gi|254780602|r 286 GPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 286 ~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
. +.-..++-.++...+.+.|++.|.++
T Consensus 257 T----L~lRm~rh~~nA~~vA~~L~~hp~V~ 283 (389)
T PRK05968 257 T----LPLRMKAHEASALLIARRLKAHPVVE 283 (389)
T ss_pred C----HHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 6----99999999999999999996199986
No 163
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=8e-17 Score=122.52 Aligned_cols=223 Identities=14% Similarity=0.185 Sum_probs=138.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222----22222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~ 138 (400)
-|+- .|.|- ++++.+.+....| .+.-++++.+..||..++.+++++||+|+++++.|..-.. .+...|.+
T Consensus 45 ~Y~R-~gnPT-~~~lE~~la~LEg----~~~a~~~~SGMaAis~~l~~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gi~ 118 (386)
T PRK08045 45 DYSR-RGNPT-RDVVQRALAELEG----GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_pred CCCC-CCCHH-HHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEE
T ss_conf 4438-98866-9999999999809----9837985678999999999707999989983786348999999872079579
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|.+.++++++++||+||+-+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +.
T Consensus 119 v~~~d~-------~d~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~i~~~a-~~~g~~~vvDNT~atP~~----~~ 183 (386)
T PRK08045 119 VLFVDQ-------GDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLA-REAGAVSVVDNTFLSPAL----QN 183 (386)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---CHHHHHHH-HHCCCEEEEECCCCCHHC----CC
T ss_conf 999699-------9989999753778559999779998761057---69999999-976998998275232311----27
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2221112333225741465443223445-4442211-0122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--|= =.|.+++ .+++..++...+......++....+.+...|+. +.-..+
T Consensus 184 Pl-~~--G---aDivvhS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rGL~T----L~lRm~ 253 (386)
T PRK08045 184 PL-AL--G---ADLVLHSCTKYLNGHSDVVAGVVIAKDPEVVTELAWWANNIGVTGGAFDSYLLLRGLRT----LVPRME 253 (386)
T ss_pred CC-CC--C---CCEEEEECCEEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC----HHHHHH
T ss_conf 30-03--8---87899966613058877234899817788999999999985877898899999836887----788999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
.-.++...+.+.|++.|.++
T Consensus 254 ~~~~nA~~lA~~L~~hp~V~ 273 (386)
T PRK08045 254 LAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred HHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999999986399853
No 164
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.71 E-value=9.8e-17 Score=122.00 Aligned_cols=223 Identities=13% Similarity=0.132 Sum_probs=139.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222----22222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~~ 138 (400)
.|+- .|.| .++++.+.+...-| .+.-++++.+..||..++.+++.+||+|+++++.|..-.. .....|.+
T Consensus 46 ~Y~R-~~nP-T~~~le~~la~LEg----~~~a~~~~SGmaAis~~~l~ll~~Gd~iv~~~~~Yg~T~~l~~~~l~~~gi~ 119 (388)
T PRK08861 46 DYTR-SGNP-NRGLLEQALSELES----GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFK 119 (388)
T ss_pred EECC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEE
T ss_conf 0448-9886-59999999999849----9837996378999999999836899989986898550689999898628869
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. .|.++++++++++||+||+=+|.|||-.+.+ +++|+++ ++++++.+++|..+.--.+ +.
T Consensus 120 ~~~~d~-------~d~~~~~~~i~~~Tkli~~EspsNP~l~v~D---i~~i~~~-A~~~g~~~vvDNT~atP~~----~~ 184 (388)
T PRK08861 120 VLFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAEVCQK-AKQVGALVAVDNTFLTPVL----QK 184 (388)
T ss_pred EEEECC-------CCCHHHHHHCCCCCEEEEEECCCCCCCEEEC---CHHHHHH-HHHCCCEEEEECCCCHHHH----CC
T ss_conf 999899-------9827899734878539998448999836656---5999999-9873995999788512530----37
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22211123332257414654432234454-442211-0122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--|== .|.+++ ++++.+.+...+......+++...+.+...|+. +.-..+
T Consensus 185 Pl-~~--G---aDivvhS~TKyi~GHsDvlgG~vv~~~~~~~~~l~~~~~~~G~~~sP~~a~l~~RGL~T----L~lRm~ 254 (388)
T PRK08861 185 PL-EL--G---ADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRT----LGARMR 254 (388)
T ss_pred CH-HC--C---CCEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 21-03--8---87899962401258887502189507488889999999851777886777888547897----889999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
.-.++...+.+.|++.|.++
T Consensus 255 ~~~~nA~~lA~~L~~hp~V~ 274 (388)
T PRK08861 255 VHEESAQEILKYLQTQSLVG 274 (388)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99986999999998499927
No 165
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.71 E-value=2.6e-18 Score=131.56 Aligned_cols=261 Identities=20% Similarity=0.189 Sum_probs=170.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88999999999998388756998778989999999986421013333223323345433332222222332232222333
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRP 123 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P 123 (400)
.+.+.++++|.++. .|.-.|+..+-..+|.+.+++.+ |.+ ..++.+.++.+..+++.++++|||+|++..+
T Consensus 9 ~~t~~m~~a~~~a~-~Gdd~Yg~D~t~~~le~~~a~l~----G~e----aalfv~sGT~AN~ial~~~~~~g~~vi~~~~ 79 (288)
T pfam01212 9 GPTPAMREAMAAAM-VGDEVYGGDPTVNRLEDRVAELF----GKE----AALFVPSGTMANQLALMAHCRRGDEVICGEP 79 (288)
T ss_pred CCCHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHH----CCC----EEEECCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 89999999998233-57732267989999999999986----998----2998688679999999983889988998357
Q ss_pred CCCC-CCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-------CCCCCEEECCCCCCC-CCCCCCCCCCCCCCC
Q ss_conf 3232-222--22222222222222222322210333100012-------212201211354210-000123333211122
Q gi|254780602|r 124 YWVS-YPD--MVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT-------PKTKWLFLNSPSNPS-GVVYSQNRLRALADV 192 (400)
Q Consensus 124 ~y~~-y~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-------~~~k~i~l~nP~NPT-G~v~s~~~l~~i~~~ 192 (400)
+... ++. ...+.|+++++++.++++ .+|+++|+++++ +++++|.+.||+|.. |++||.+++++|.++
T Consensus 80 sHi~~~E~ga~~~~~G~~~~~l~~~~~G--~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~el~~i~~~ 157 (288)
T pfam01212 80 AHIYFDETGGHAELGGAQPVPLPGAEAG--KLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAI 157 (288)
T ss_pred CCCEEECCCHHHHHCCCEEEECCCCCCC--CCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHH
T ss_conf 6765456777999829825844787789--82999999987644985467654799995544889665578999999999
Q ss_pred CCCCCCCEEECCCCCC--CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 3333320111012211--00000122332221112333225741465443223445444221101226875310012223
Q gi|254780602|r 193 LVRNPHVHIISDDIYE--HIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 193 ~a~~~~i~ii~De~Y~--~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
| +++++.+..|-+=- -....+. ++..+... -.++++ |+||..++|+ -+.+++++++++...+.+.....
T Consensus 158 a-~~~gl~lHmDGARl~nA~~a~~~---~~~e~~~~--~D~v~~-~~sK~lga~~--Gavl~g~~~~i~~a~~~rk~lGg 228 (288)
T pfam01212 158 A-REHGIPLHLDGARLANAAVALGV---IVKEITSY--ADSVSM-SLSKGLGAPV--GSVLAGSDDFIAYAIRQRKYLGG 228 (288)
T ss_pred H-HHCCCEEEEHHHHHHHHHHHCCC---CHHHHHCC--CCEEEE-EEECCCCCCE--EEEEEECHHHHHHHHHHHHHHHC
T ss_conf 9-98099376308789888876099---98898546--888999-8435788610--03898289999999999999726
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC-CCEEEEE
Q ss_conf 3222--22222222234676432222221100000002455304776033027-4089986
Q gi|254780602|r 271 GACS--IAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD-GAFYLYP 328 (400)
Q Consensus 271 ~~~~--~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~-g~~y~~~ 328 (400)
++.. +.-.+++.+|+.. +.. ...-.++.+.+.+.|+.++++.+.+++ -+.++|+
T Consensus 229 ~mrq~g~~aaa~~~aL~~~---~~~-l~~dh~~A~~La~~l~~~~~~~~~~~~t~~~~v~v 285 (288)
T pfam01212 229 GMRQAGVLAAAGLRALEEG---VAR-LGRDHATARRLAEGLELLRGVIPRRVYTNTHMVFV 285 (288)
T ss_pred CHHHHHHHHHHHHHHHHHC---HHH-HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
T ss_conf 4256679999999999808---988-88889999999999976899322678786059996
No 166
>KOG1549 consensus
Probab=99.71 E-value=1.6e-17 Score=126.86 Aligned_cols=204 Identities=18% Similarity=0.190 Sum_probs=145.5
Q ss_pred HCCCCEEECCCCCCCCCCCHHHHHHHHHHHHC----CCCC-CC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897498899999999999838----8756-99--87789899999999864210133332233233454
Q gi|254780602|r 28 SKGIDVLCLTAGEPDFDMPENVKYAVVRAMER----GETK-YT--AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGA 100 (400)
Q Consensus 28 ~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~----~~~~-Y~--~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~ 100 (400)
..|.+.+.|..|.- -|.|+.|.+|+.+.+.+ +... |. ...+..+.|+.||+.+ +.|+++|++|+|+
T Consensus 39 ~~~~~~vyld~~at-~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFts~A 111 (428)
T KOG1549 39 HHGTRPVYLDNQAT-GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFTSGA 111 (428)
T ss_pred CCCCCCEEEECCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH------CCCCCCEEEECCC
T ss_conf 47786079706767-8999899999999999852599855420233589999999999984------8997737994796
Q ss_pred CCCCCCCCCCCCC-CCC----CCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECC
Q ss_conf 3333222222233-223----2222333323222222---2222222222222223222103331000122122012113
Q gi|254780602|r 101 KHVIFNALMATVN-MGD----EVLIPRPYWVSYPDMV---ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNS 172 (400)
Q Consensus 101 ~~~l~~~~~~~~~-~Gd----~Vlv~~P~y~~y~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~n 172 (400)
++++.++++.+.. .+| +|++..-.|++....+ +..|..++++|.. +. ...|.+.+++.|+++||++.+..
T Consensus 112 TEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~-~~-~~~d~~~~~~~i~~~T~lv~I~~ 189 (428)
T KOG1549 112 TESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE-DS-GLVDISKLREAIRSKTRLVSIMH 189 (428)
T ss_pred HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCC-CC-CCCCHHHHHHHCCCCCEEEEEEE
T ss_conf 07888999872202456666369995045760048999998668279991568-65-52118999975387743999970
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 54210000123333211122333332011101221100000122332221112333225741465443223445444221
Q gi|254780602|r 173 PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAA 252 (400)
Q Consensus 173 P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v 252 (400)
-+|=+|.+.+-+| |+++| +++++.++.|.+.+- |.-......+.. -+...|..|.|+.|| +|++.
T Consensus 190 Vnn~~gv~~Pv~E---I~~ic-r~~~v~v~~DaAQav----G~i~vDV~eln~-----D~~s~s~HK~ygp~~--iGaLY 254 (428)
T KOG1549 190 VNNEIGVLQPVKE---IVKIC-REEGVQVHVDAAQAV----GKIPVDVQELNA-----DFLSISAHKIYGPPG--IGALY 254 (428)
T ss_pred CCCCCCCCCCHHH---HHHHH-CCCCCEEEEEHHHHC----CCCCCCHHHCCC-----HHEEEECCCCCCCCC--CEEEE
T ss_conf 0367421056999---99985-747807984545434----974411888582-----124643253027996--06999
Q ss_pred CHH
Q ss_conf 101
Q gi|254780602|r 253 GAL 255 (400)
Q Consensus 253 ~~~ 255 (400)
..+
T Consensus 255 vr~ 257 (428)
T KOG1549 255 VRR 257 (428)
T ss_pred ECC
T ss_conf 746
No 167
>KOG1368 consensus
Probab=99.71 E-value=8.2e-17 Score=122.47 Aligned_cols=312 Identities=18% Similarity=0.224 Sum_probs=200.4
Q ss_pred CHHHHHHHHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 999999999998-38875699877898999999998642101333322332334543333222222233-2232222333
Q gi|254780602|r 46 PENVKYAVVRAM-ERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVN-MGDEVLIPRP 123 (400)
Q Consensus 46 p~~i~~a~~~al-~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~-~Gd~Vlv~~P 123 (400)
-.+++++|.+|. .++.+|+-++. -.|-+.+|+-..+.-| +++++|+. +..++++..|. +|.+||+-+-
T Consensus 35 TdeMr~am~eA~vgDdVyGeD~tt--~rLE~~vA~l~GKEAg-------LFv~SGTm-gNllaIm~Hc~~rg~eii~gd~ 104 (384)
T KOG1368 35 TDEMRRAMAEASVGDDVYGEDPTT--NRLEQRVAELFGKEAG-------LFVPSGTM-GNLLAIMVHCHQRGSEIIVGDR 104 (384)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCH--HHHHHHHHHHHCCCCE-------EEECCCCC-CCHHHHHHHHCCCCCEEEECCC
T ss_conf 599999986453475213678518--8999999998475412-------56326653-1078887874488855784361
Q ss_pred CC-CCCCC--CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-C-------CCCCEEECCCCCCCC-CCCCCCCCCCCCC
Q ss_conf 32-32222--22222222222222222322210333100012-2-------122012113542100-0012333321112
Q gi|254780602|r 124 YW-VSYPD--MVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT-P-------KTKWLFLNSPSNPSG-VVYSQNRLRALAD 191 (400)
Q Consensus 124 ~y-~~y~~--~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~-------~~k~i~l~nP~NPTG-~v~s~~~l~~i~~ 191 (400)
+- ..|++ +..+.|+.+.++.- +++-.+|+++|++++. + -||+|.|-|-||-+| .+++.|++.++.+
T Consensus 105 ~HI~~~E~gg~s~l~gv~~~tv~~--e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~ 182 (384)
T KOG1368 105 AHIHRYEQGGISQLAGVHVRTVKN--ENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKA 182 (384)
T ss_pred HHEEEHHCCCHHHHCCCEEEEEEE--CCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHH
T ss_conf 032121216721104614675431--799755699998762189997358973179862131356866741999999999
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCC--CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHCCCC
Q ss_conf 2333332011101221100000122--332221112333225741465443223445444-2211012268753100122
Q gi|254780602|r 192 VLVRNPHVHIISDDIYEHIVYRNCQ--FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAAGALSLIKSMIVLQGQQ 268 (400)
Q Consensus 192 ~~a~~~~i~ii~De~Y~~l~~~~~~--~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~~~~li~~l~~~~~~~ 268 (400)
+| +++++.+-.|-+- .|+..- -.|+-.+.. .+| .+.++ +||.++.| +| .+|+++++|++....+...
T Consensus 183 la-k~~glkLH~DGAR---i~NAavasgV~vk~i~~-~fD-SVsiC-LSKglgAP---VGSViVG~k~FI~kA~~~RKal 252 (384)
T KOG1368 183 LA-KRHGLKLHMDGAR---IFNAAVASGVPVKKICS-AFD-SVSIC-LSKGLGAP---VGSVIVGSKDFIDKARHFRKAL 252 (384)
T ss_pred HH-HCCCCEEECCHHH---HHHHHHHCCCCHHHHHH-HHH-HHHHH-HHCCCCCC---CCCEEECCHHHHHHHHHHHHHH
T ss_conf 99-6159715336266---65578771998999987-632-42435-53557887---4017875288999989999975
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECC-CCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 2332--2222222222234676432222221100000002455304776033027-408998626410233211332248
Q gi|254780602|r 269 TSGA--CSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPD-GAFYLYPSCQDLIGKKSPSGDVIR 345 (400)
Q Consensus 269 ~~~~--~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~-g~~y~~~~~~~~~~~~~~~~~~~~ 345 (400)
..++ +.....+++-+|++... ....-.++...+.+.++..+++++..|. -+-++.+.+. ....
T Consensus 253 GGGmRQsGvLaaaaLval~~~~~----~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~----------q~~~ 318 (384)
T KOG1368 253 GGGMRQSGVLAAAALVALDENVP----LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLC----------QARL 318 (384)
T ss_pred CCCHHHHHHHHHHHHHHHHCCHH----HHHHHHHHHHHHHHHHCCCCCEEEECCHHHCCEEEEECC----------CCCC
T ss_conf 68613777999988987631227----778779999999998646666346322131233211102----------5667
Q ss_pred CHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHH-HHHHHH
Q ss_conf 9899999999873979983502289972899962--9999999999999-999986
Q gi|254780602|r 346 TDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA--VSDAILEEACVRI-KRFCHS 398 (400)
Q Consensus 346 ~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~--~~~e~l~~al~rl-~~~l~~ 398 (400)
+..+++..+ ++.||++.+|..+ -+|+.|- .++++++..+..+ ++|+..
T Consensus 319 ~~~~l~~~~-~k~gi~lm~~~s~----r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368 319 TAEELCKFL-EKNGILLMGGASR----RIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred CHHHHHHHH-HHCCEEEEECCCC----CEEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf 899999889-8778588614666----24899998437899999999999999852
No 168
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.70 E-value=6.4e-18 Score=129.22 Aligned_cols=190 Identities=22% Similarity=0.313 Sum_probs=133.1
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 99999998388756998778989999999986421013333223323345433332222222-33223222233332322
Q gi|254780602|r 50 KYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPYWVSY 128 (400)
Q Consensus 50 ~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~y~~y 128 (400)
.+++.+.++.+....++ =..++.+.+++|+...+ .+.++.++.||.+++.++ +.+||+|++|.-+|+.-
T Consensus 2 ~~~v~~~l~s~~~~~G~--~v~~fE~~~~~~~g~k~--------~v~~~sgt~Al~lal~~l~~~~gdeVi~p~~t~~at 71 (352)
T cd00616 2 LEAVEEVLDSGWLTLGP--KVREFEKAFAEYLGVKY--------AVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHHCCCCCCCH--HHHHHHHHHHHHHCCCE--------EEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHH
T ss_conf 78999998369977987--69999999999978593--------999768899999999986978839999899763989
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 22222222222222222223222103331000122122012113542100001233332111223333320111012211
Q gi|254780602|r 129 PDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 129 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~ 208 (400)
...+..+|++|+.++++++ .|.+|+++++++++++||+|++++. -|.. .++++|.++| +++++.||+|.+++
T Consensus 72 ~~ai~~~G~~pv~~Di~~~-t~~id~~~l~~~i~~~tkaIi~vh~---~G~~---~d~~~i~~~~-~~~~i~lIeDaA~a 143 (352)
T cd00616 72 ANAILLLGATPVFVDIDPD-TYNIDPELIEAAITPRTKAIIPVHL---YGNP---ADMDAIMAIA-KRHGLPVIEDAAQA 143 (352)
T ss_pred HHHHHHCCCEEEEEECCCC-CCCCCHHHHHHHCCCCCCEEEEECC---CCCC---CCHHHHHHHH-HHCCCEEEEHHHHH
T ss_conf 9999985998998407778-5775889999762868709999689---8986---6889999999-97798998022002
Q ss_pred CCC-CCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCC
Q ss_conf 000-00122332221112333225741465--4432234454442211-012268753100122
Q gi|254780602|r 209 HIV-YRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYAAG-ALSLIKSMIVLQGQQ 268 (400)
Q Consensus 209 ~l~-~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~v~-~~~li~~l~~~~~~~ 268 (400)
.-. |++.. +.+.. | +.+.|| +|.++ +| --|.++. ++++.+.+..++.+.
T Consensus 144 ~Gs~~~~~~---~G~~g----d--~~~fSF~~~K~it-~g-eGG~i~tn~~~~~~~~~~lr~~G 196 (352)
T cd00616 144 LGATYKGRK---VGTFG----D--AGAFSFHPTKNLT-TG-EGGAVVTNDEELAERARLLRNHG 196 (352)
T ss_pred CCCCCCCEE---CCCCC----C--CCCCCCCCCCCCC-CC-CCEEEEECCHHHHHHHHHHHHCC
T ss_conf 168346712---56643----4--2534478775676-77-73499969999999999999659
No 169
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=2.6e-16 Score=119.42 Aligned_cols=163 Identities=20% Similarity=0.238 Sum_probs=109.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 99877898999999998642101333322332334543333222222233223222233332322222----22222222
Q gi|254780602|r 64 YTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGIP 139 (400)
Q Consensus 64 Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~~ 139 (400)
|+- .|.|- ++++.+.+...-| .+.-++++.+..||..++.+++++||+|++....|..-... +...|.++
T Consensus 52 YsR-~gnPT-~~~LE~~la~LEg----~~~a~~~~SGMaAIs~~ll~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~gi~~ 125 (424)
T PRK06084 52 YTR-IMNPT-NDVLEQRVAALEG----GVGALAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQT 125 (424)
T ss_pred ECC-CCCHH-HHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEE
T ss_conf 119-98867-9999999999859----98489954789999999998418999899827985638999999887468615
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 22222222322210333100012212201211354210000123333211122333332011101221100000122332
Q gi|254780602|r 140 VFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN 219 (400)
Q Consensus 140 ~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s 219 (400)
.+++. -|.++++++++++||+||+=+|.|||..+.+ +++|+++| +++++++++|..+.--.+ +.+
T Consensus 126 ~fvd~-------~d~~~~~~~i~~~Tklv~~EsP~NPtl~v~D---I~~i~~iA-~~~g~~~vVDNT~atP~~----~~P 190 (424)
T PRK06084 126 RFAAH-------DDIAALEALIDERTKAVFCESIGNPAGNIVD---LQALADAA-HRHGVPLIVDNTVATPVL----CRP 190 (424)
T ss_pred EEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---HHHHHHHH-HHCCCEEEEECCCCCCCC----CCH
T ss_conf 99588-------6779999754876518998438999865037---89999999-874995995457635232----680
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCC
Q ss_conf 22111233322574146544322344544-42211
Q gi|254780602|r 220 IVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAAG 253 (400)
Q Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v~ 253 (400)
+.+ + --|++.|.||.++--|=-+ |.+++
T Consensus 191 -l~~--G---aDivvhS~TKYi~GHsDvl~G~vi~ 219 (424)
T PRK06084 191 -FEH--G---ADIVVHSLTKYMGGHGTSIGGIVVD 219 (424)
T ss_pred -HHH--C---CCEEEEECCEECCCCCCEEEEEEEC
T ss_conf -452--8---9889996652205887603678971
No 170
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.70 E-value=8.5e-17 Score=122.36 Aligned_cols=223 Identities=15% Similarity=0.181 Sum_probs=138.2
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 6998778989999999986421013333223323345433332222222332232222333323222----222222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP----DMVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~ 138 (400)
.|+- .|.| .++++.+.+...-| .+.-++++.+..|+..++.+++++||+|++.+..|..-. ......|.+
T Consensus 53 ~YsR-~gNP-T~~~lE~~lA~LEg----g~~a~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~ 126 (405)
T PRK08776 53 DYTR-SGNP-TRDLLGEALAELEG----GAGGVITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFA 126 (405)
T ss_pred EECC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf 3418-9887-89999999999829----9968994679999999999973899989986886117999999987548889
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|++.++++++++||+||+-+|.|||-.+.+ +++|+++| +++++++++|..+..-.+ ..
T Consensus 127 ~~~vd~-------~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~~ 191 (405)
T PRK08776 127 LITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAA-HKVGALTVVDNTFLSPAL----QK 191 (405)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEEEC---CHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 999689-------9989999743777659999889999886027---59999999-873997999799764002----68
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2221112333225741465443223445-44422110-122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ .--|++.|.||.++--|= =.|.+++. +++.+++...+.....+++....+.+...|+. +.-..+
T Consensus 192 Pl-~~-----GaDivihS~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~da~L~lRGLkT----L~lRm~ 261 (405)
T PRK08776 192 PL-EF-----GADLVLHSTTKYINGHSDVVGGAVVARDAALHQQLVWWANALGLTGSPFDAFLTLRGLRT----LDARLR 261 (405)
T ss_pred HH-HH-----CCCEEEEECCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC----HHHHHH
T ss_conf 26-52-----797899972604327865305622268889999999999860888883357888645788----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.++
T Consensus 262 r~~~nA~~lA~~L~~hp~V~ 281 (405)
T PRK08776 262 VHQENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999997098968
No 171
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.69 E-value=5.9e-17 Score=123.31 Aligned_cols=330 Identities=19% Similarity=0.245 Sum_probs=215.6
Q ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHCCC---CCCCCCCC------CHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 6997266565897-49889999999999983887---56998778------98999999998642101333322332334
Q gi|254780602|r 29 KGIDVLCLTAGEP-DFDMPENVKYAVVRAMERGE---TKYTAVAG------ISPLREAIVEKFRRDNDLHYTSDQIIVGT 98 (400)
Q Consensus 29 ~g~~ii~l~~G~p-~~~~p~~i~~a~~~al~~~~---~~Y~~~~G------~~~lR~aia~~~~~~~g~~~~~e~I~it~ 98 (400)
+|++.|.|-- | .-.+|..+.+|+.++|.... .++..+.| ..+.|+++|..++. -+||.|+++.
T Consensus 18 ~~~~~~~~Dn--pAG~q~Pq~V~dAv~~~L~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA-----~~Pe~vv~G~ 90 (410)
T TIGR01976 18 KDKDVVFFDN--PAGTQIPQSVLDAVSAALTRSNANRGGAYESSGRKADQVVDDAREAVADLLNA-----ESPEEVVFGA 90 (410)
T ss_pred CCCCEEEEEC--CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC-----CCCCCEEECC
T ss_conf 8973689757--88887773479999999874130137677663068999999999999997267-----9888567678
Q ss_pred CCCCCCCCCCCCC---CCCCCCCCCCCCC-CC---CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEC
Q ss_conf 5433332222222---3322322223333-23---222222222222222222222322210333100012212201211
Q gi|254780602|r 99 GAKHVIFNALMAT---VNMGDEVLIPRPY-WV---SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLN 171 (400)
Q Consensus 99 G~~~~l~~~~~~~---~~~Gd~Vlv~~P~-y~---~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~ 171 (400)
..+..++.+..++ ..+||||||..=- +. +|.+.++..|+++...+.+++. +.++.++|+.+|++|||++-++
T Consensus 91 ~~T~L~~~ls~a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~Ga~Vkw~~~d~~~-~~L~~~~L~~Lls~rTRLVAvt 169 (410)
T TIGR01976 91 NATSLAYLLSRALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAGAKVKWARVDEAD-GELHPDDLASLLSPRTRLVAVT 169 (410)
T ss_pred CHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCC-CCCCHHHHHCCCCCCHHHHHHH
T ss_conf 668999999999851268985589716766001368999998389789996336231-5448699823668822555623
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 35421000012333321112233333201110122110000012233222111233322574146544322344544422
Q gi|254780602|r 172 SPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA 251 (400)
Q Consensus 172 nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 251 (400)
.-+|=||++- ++++|.++ ++..|.++.+|-++ |-....+.+... +.-+.++|.=|.|| | .+|.+
T Consensus 170 ~ASn~~Gs~~---dl~A~~~~-vh~aGA~v~VDaVh----yaPH~L~Dvqa~-----gaD~l~cSaYK~fG-P--H~G~l 233 (410)
T TIGR01976 170 AASNLLGSIV---DLAALTEL-VHAAGALVYVDAVH----YAPHGLIDVQAL-----GADFLVCSAYKFFG-P--HLGIL 233 (410)
T ss_pred HHHCCCCCHH---HHHHHHHH-HHHCCCEEEECHHH----HCCCCCCCHHHH-----CCCEEEECCEECCC-C--CEEEE
T ss_conf 4402325511---58899999-98759879881110----045666413422-----78879985631168-8--50178
Q ss_pred CCHHHHHHHHHHHCCCCC---------CCCCCCCC----CCCCCCCCCCC-----C----CC-------CCCCCCCCCCC
Q ss_conf 110122687531001222---------33222222----22222234676-----4----32-------22222110000
Q gi|254780602|r 252 AGALSLIKSMIVLQGQQT---------SGACSIAQ----WAAVEALNGPQ-----D----FV-------VNNRKIFEYRR 302 (400)
Q Consensus 252 v~~~~li~~l~~~~~~~~---------~~~~~~~q----~a~~~~l~~~~-----~----~~-------~~~~~~~~~~r 302 (400)
.+-.++++.+.-.+.... .|...+-- .|++.+|.... + -. +...++-+.-+
T Consensus 234 ~~R~~~~~~l~~~k~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~ 313 (410)
T TIGR01976 234 WGRPELLKSLPPYKLEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLA 313 (410)
T ss_pred EECHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 71146640468763367788888514514556026789999999999823210689886558999999999999999999
Q ss_pred CCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-----------CC
Q ss_conf 0002455304776033027408998626410233211332248989999999987397998350228-----------99
Q gi|254780602|r 303 DLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-----------HG 371 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-----------~~ 371 (400)
+.|.+.|+++|+++++-++-.-=+=-.+|.+ .+........+.+++|. +.+|.+..|+.|. ..
T Consensus 314 ~~Ll~~L~~~P~~t~yG~~d~~R~~~RvPTv-----~F~v~~~~P~~~~~~La-~~~v~~~~GHfYA~~~~~~LGl~~~~ 387 (410)
T TIGR01976 314 ERLLAGLSDLPGVTVYGVQDEKRLAERVPTV-----AFTVAGLSPQRVVRRLA-DQGVDVWAGHFYAVRLLRRLGLEADG 387 (410)
T ss_pred HHHHHHHHHCCCEEEECHHHHHHHHHCCCEE-----EEEECCCCHHHHHHHHH-HCCCEEECCCCHHHHHHHHCCCCCCC
T ss_conf 9999998748956997355786464259758-----89727878799999985-36863312641168999865898988
Q ss_pred CEEEEEEE--CCHHHHHHH
Q ss_conf 72899962--999999999
Q gi|254780602|r 372 PSIRISYA--VSDAILEEA 388 (400)
Q Consensus 372 ~~iRis~~--~~~e~l~~a 388 (400)
|-||++++ .+.|++.+-
T Consensus 388 GvvR~gLaHY~t~eevd~l 406 (410)
T TIGR01976 388 GVVRVGLAHYNTAEEVDRL 406 (410)
T ss_pred CEEEEEECCCCCHHHHHHH
T ss_conf 7389852577988999999
No 172
>KOG1411 consensus
Probab=99.69 E-value=2.9e-17 Score=125.21 Aligned_cols=340 Identities=14% Similarity=0.156 Sum_probs=209.5
Q ss_pred CCCCHHHHHHHHHHHHHHC-CCCEEECCCCCC--CC--C-CCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 8975899999999999986-997266565897--49--8-89999999999983887-5699877898999999998642
Q gi|254780602|r 11 VQPSATLVAAQRVRDLRSK-GIDVLCLTAGEP--DF--D-MPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 11 l~~s~~~~~~~~~~~~~~~-g~~ii~l~~G~p--~~--~-~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
-.|-|++.+.+..+ +. +..=|||++|-= |- | .-+.|++|-++.+.... ..|.|..|++|..+..++..-.
T Consensus 34 aPpDpILGVTeAfk---~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakLa~G 110 (427)
T KOG1411 34 APPDPILGVTEAFK---KDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKLALG 110 (427)
T ss_pred CCCCCCCCHHHHHH---CCCCCCEEEECCCCEECCCCCEEEEHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHC
T ss_conf 99987222789875---489843342011100148898454178889999875311350120245618888887887615
Q ss_pred HCCCCCCCCCCCCC--CCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 10133332233233--4543333--2222222332232222333323222222222222222222222322210333100
Q gi|254780602|r 84 DNDLHYTSDQIIVG--TGAKHVI--FNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 84 ~~g~~~~~e~I~it--~G~~~~l--~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
..--.+...+|+.+ -.++.+| ...|.+...|+..|.+|+|+|.++..+...+|....++.-.....-.+|++.+-+
T Consensus 111 ~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~le 190 (427)
T KOG1411 111 DNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLE 190 (427)
T ss_pred CCCHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHH
T ss_conf 88544420532688740575326677899986266661561587534567630025861256663054100135677899
Q ss_pred CCCCCC-CCEEECC--CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCCCCCEEEEE
Q ss_conf 012212-2012113--5421000012333321112233333201110122110000012--2332221112333225741
Q gi|254780602|r 160 AITPKT-KWLFLNS--PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC--QFSNIVNVEPSLYERTLVV 234 (400)
Q Consensus 160 ~i~~~~-k~i~l~n--P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~--~~~s~~~~~~~~~~~~i~~ 234 (400)
.+.+.+ ..++|++ -|||||.--+.|.+++|.+.. ++.+.+-+.|-+|..|.-++. ...++--+. +...+++..
T Consensus 191 dl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~-~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~-~~g~~~~la 268 (427)
T KOG1411 191 DLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLI-KEKNLLPFFDMAYQGFASGDLDKDAQAVRLFV-EDGHEILLA 268 (427)
T ss_pred HHHCCCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHH-HHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH-HCCCCEEEE
T ss_conf 8741788848985221038878896088899999876-54035614665540423587024578999998-707756765
Q ss_pred CCCCCCCCCCCCCCCCCC---CHHHHH----HHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCC---CCCCCCCCC
Q ss_conf 465443223445444221---101226----87531001222332222222222223467---64322---222211000
Q gi|254780602|r 235 NGVSKAYAMTGLRIGYAA---GALSLI----KSMIVLQGQQTSGACSIAQWAAVEALNGP---QDFVV---NNRKIFEYR 301 (400)
Q Consensus 235 ~S~SK~~~~~G~RiG~~v---~~~~li----~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~---~~~~~~~~~ 301 (400)
.||.|..|+.|-|+|.+- .+++.. .++..+..-+.+++|.....++...|.++ ..|+. -+.+++...
T Consensus 269 QSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~m 348 (427)
T KOG1411 269 QSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGMADRIISM 348 (427)
T ss_pred HHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55655232033203505787267888887887788886011358986511455540477677778888899987766556
Q ss_pred CCCHHHHHHCC--CC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE
Q ss_conf 00002455304--77-6033027408998626410233211332248989999999987397998350228997289996
Q gi|254780602|r 302 RDLCVAQLQGV--PG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY 378 (400)
Q Consensus 302 r~~~~~~L~~~--~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~ 378 (400)
|+.+.+.|+.. ++ ++.+.-|=|||+|--+. .+-++.|.+++.|..+- + =|||.
T Consensus 349 R~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~----------------peQv~~l~ke~~iYmT~------d--GRiS~ 404 (427)
T KOG1411 349 RQQLFDALEKEGSPGNWSHITKQIGMFCFTGLN----------------PEQVDWLTKEYHIYLTK------D--GRISM 404 (427)
T ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCC----------------HHHHHHHHHHHEEEECC------C--CEEEE
T ss_conf 888767763579876679999762003324789----------------99999987652366525------8--63762
Q ss_pred E
Q ss_conf 2
Q gi|254780602|r 379 A 379 (400)
Q Consensus 379 ~ 379 (400)
+
T Consensus 405 a 405 (427)
T KOG1411 405 A 405 (427)
T ss_pred C
T ss_conf 3
No 173
>PRK05939 hypothetical protein; Provisional
Probab=99.69 E-value=2e-16 Score=120.09 Aligned_cols=180 Identities=18% Similarity=0.254 Sum_probs=116.0
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899999999999838875699877-89899999999864210133332233233454333322222223322322223
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP 121 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~ 121 (400)
|+.+++..+ +......+|.-++ |.| .++++.+.+....| .+.-++++.+..||..++.+++++||+|++.
T Consensus 21 f~~~~~~~~----~~~~~~~~~~YsR~~nP-T~~~le~~la~LEg----g~~a~~~sSGMaAi~~~l~~ll~~Gd~il~~ 91 (396)
T PRK05939 21 FEDARDLID----VFQGKKAGFTYARQGTP-TTAALEAKITEMEG----GVGTVCFATGMAAIAAVFLTLLRAGDHLVSS 91 (396)
T ss_pred ECCHHHHHH----HHCCCCCCCEEECCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 499899999----85588589634089986-79999999999829----9749996579999999999835889889953
Q ss_pred CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33323222222---222222222222222322210333100012212201211354210000123333211122333332
Q gi|254780602|r 122 RPYWVSYPDMV---ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH 198 (400)
Q Consensus 122 ~P~y~~y~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~ 198 (400)
...|..-..++ ...|.++.+++. -|+++++++++++||+||+-+|.|||..+.+ +++|+++| ++++
T Consensus 92 ~~~YG~t~~l~~~l~~~GI~v~~vd~-------~d~~~~~~ai~~~Tklv~~EspsNP~l~v~D---i~~i~~ia-~~~g 160 (396)
T PRK05939 92 QYLFGNTNSLLGTLQGLGVEVTMVDA-------TDVQQVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALC-RERG 160 (396)
T ss_pred CCCCCHHHHHHHHHHHCCEEEEEECC-------CCHHHHHHHHCCCCCEEEEEECCCCCCCCCC---HHHHHHHH-HHCC
T ss_conf 88692299999986531869999889-------7989999861856618999808999870758---99999999-9839
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCC
Q ss_conf 011101221100000122332221112333225741465443223445444-221
Q gi|254780602|r 199 VHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAA 252 (400)
Q Consensus 199 i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v 252 (400)
+.+++|..+.--.+ ..++ .+ + --|++.|.||..+--|--+| .++
T Consensus 161 ~~~vVDNT~atP~~----~~Pl-~~--G---aDivvhS~TKyi~GhsD~l~G~vv 205 (396)
T PRK05939 161 LVYVVDNTMTSPWL----FRPK-SV--G---ASLVINSLSKYIAGHGNALGGAVT 205 (396)
T ss_pred CEEEEECCCCHHHH----CCHH-HH--C---CCEEEEECCCCCCCCCCEEEEEEE
T ss_conf 97999777630420----5855-63--8---988998343302588774769996
No 174
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.69 E-value=3e-16 Score=119.05 Aligned_cols=174 Identities=14% Similarity=0.190 Sum_probs=113.4
Q ss_pred HHHHHHCCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999838875699877-898999999998642101333322332334543333222222233223222233332322222
Q gi|254780602|r 53 VVRAMERGETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM 131 (400)
Q Consensus 53 ~~~al~~~~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~ 131 (400)
..+..+....+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..-...
T Consensus 45 ~~~~~~~~~~g~~YsR~gNP-T~~~LE~~la~LEg----g~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l 119 (433)
T PRK08134 45 AAALFNLERAGHVYSRISNP-TTAVLEERVAALEG----GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNL 119 (433)
T ss_pred HHHHHCCCCCCCEECCCCCH-HHHHHHHHHHHHCC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCEECCHHHH
T ss_conf 98763576679601499886-69999999999809----98279853889999999997489999899718807737999
Q ss_pred ----CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf ----2222222222222222322210333100012212201211354210000123333211122333332011101221
Q gi|254780602|r 132 ----VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 132 ----~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
+...|.++.+++. -|+++++++++++||+||+-+|.|||-.+.+ +++|+++ ++++++.+++|..+
T Consensus 120 ~~~~l~~~Gi~~~~vd~-------~d~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~aia~i-A~~~g~~~vVDNT~ 188 (433)
T PRK08134 120 LHYTLPRFGIETTFVKP-------RDIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAI-AHEAGVPLLVDSTF 188 (433)
T ss_pred HHHHHHHCCEEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCC
T ss_conf 99877634837999889-------7846788755987528998538999750358---9999999-97567619971665
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCC
Q ss_conf 10000012233222111233322574146544322344544-4221
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAA 252 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v 252 (400)
.--.+ +.++ .+ + --|++.|.||.++--|-=+ |.++
T Consensus 189 atP~~----~~Pl-~~--G---aDivvhS~TKYl~GHsDvlgG~vv 224 (433)
T PRK08134 189 TTPYL----LRPF-EH--G---ADLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred CHHHH----CCHH-HH--C---CCEEEEECCEEECCCCCEEEEEEE
T ss_conf 11530----5805-52--8---988999654672588754778985
No 175
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.9e-16 Score=120.20 Aligned_cols=223 Identities=16% Similarity=0.161 Sum_probs=141.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.|- ++++.+.+....| .+.-++++.+..|+..++.+++.+||+|+++...|..-... +...|.+
T Consensus 55 ~YsR-~~NPT-~~~lE~~la~LEg----~~~a~~fsSGmaAis~~ll~ll~~Gd~il~~~~~YggT~~l~~~~l~~~Gi~ 128 (395)
T PRK08114 55 FYGR-RGTLT-HFSLQEAMCELEG----GAGCALYPCGAAAVANSILAFVEQGDHVLMTGTAYEPSQDFCSKILSKLGVT 128 (395)
T ss_pred EEEC-CCCHH-HHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCE
T ss_conf 7778-98876-9999999999709----9737982688999999999970899989976888568999999999875956
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC--CEEECCCCCCCCCCCCCC
Q ss_conf 222222222322210333100012212201211354210000123333211122333332--011101221100000122
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH--VHIISDDIYEHIVYRNCQ 216 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~--i~ii~De~Y~~l~~~~~~ 216 (400)
+.+++. -|.++++++++++||+||+-+|.|||-.+.+ +++|++++ ++++ +.+++|..+.--.+
T Consensus 129 v~~~d~-------~d~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~i~~~a-~~~~~~~~~vvDNTfatP~~---- 193 (395)
T PRK08114 129 TTWFDP-------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---IPAIVAAV-RSVAPDAVIMIDNTWAAGVL---- 193 (395)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCCCEEEECCCCCCCCC----
T ss_conf 998579-------9999999746877549999448986652267---99999999-86056868997188788765----
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33222111233322574146544322344-54442211012268753100122233222222222222346764322222
Q gi|254780602|r 217 FSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 217 ~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
+.++ .+ .--|++.|.||.++--| .=.|.+++++++.+++...+.....++++...+.+...|+. +.-..
T Consensus 194 ~~Pl-~~-----GaDivihS~TKyl~GHsDv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~Ll~RGL~T----L~lRm 263 (395)
T PRK08114 194 FKAL-DF-----GIDISIQAGTKYLIGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRT----LGVRL 263 (395)
T ss_pred CCCC-CC-----CCEEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC----HHHHH
T ss_conf 5444-66-----67499996665005778852478852788999999999973787997999999756763----88999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
++-.++...+.+.|++.|.++
T Consensus 264 ~~~~~nA~~vA~~L~~hp~V~ 284 (395)
T PRK08114 264 KQHQESSLKVAEWLAEHPEVA 284 (395)
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999996399975
No 176
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.5e-16 Score=120.95 Aligned_cols=313 Identities=16% Similarity=0.156 Sum_probs=187.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 88999999999998388756998778989999999986421013333223323345433332222222332232222333
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRP 123 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P 123 (400)
.+.|.++|+|.++-.. ..+.-|..++-+++.++.++.+|. +.++++++++++..+++.+.|.||+.||+..-
T Consensus 11 g~~~~m~eam~~a~~~----~~~~YG~D~~~~~~e~~~ae~~g~----~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~ 82 (342)
T COG2008 11 GPTPEMREALAAANAV----GDDVYGEDPTTNALEQRIAELFGK----EAALFVPSGTQANQLALAAHCQPGESVICHET 82 (342)
T ss_pred CCCHHHHHHHHHCCCC----CCCCCCCCHHHHHHHHHHHHHHCC----CEEEEECCCCHHHHHHHHHHCCCCCEEEEECC
T ss_conf 8799999999855245----787778888999999999998577----44999268438889999986489976998525
Q ss_pred CCC-CCCC-CCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCC------CCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 323-2222-22222-2222222222223222103331000122------1220121135421000012333321112233
Q gi|254780602|r 124 YWV-SYPD-MVALC-GGIPVFVDTQQDDNFQVSPEKLEQAITP------KTKWLFLNSPSNPSGVVYSQNRLRALADVLV 194 (400)
Q Consensus 124 ~y~-~y~~-~~~~~-g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a 194 (400)
.-. .|+. .+..+ ++.++ +..+..+-.+++|++++.+.+ .++.+++.|++|=-|+|||.+++++|.++|
T Consensus 83 aHi~~~E~Ga~~~~~~~~~~--~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~- 159 (342)
T COG2008 83 AHIYTDECGAPEFFGGGQKL--PIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVC- 159 (342)
T ss_pred CCCEECCCCCHHHHCCCCEE--CCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCEECCHHHHHHHHHHH-
T ss_conf 31202356758887388543--047987787399999976367776558875079861367786664899999999999-
Q ss_pred CCCCCEEECCCCC--CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHCCCCCCC
Q ss_conf 3332011101221--1000001223322211123332257414654432234454442-211012268753100122233
Q gi|254780602|r 195 RNPHVHIISDDIY--EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGY-AAGALSLIKSMIVLQGQQTSG 271 (400)
Q Consensus 195 ~~~~i~ii~De~Y--~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~-~v~~~~li~~l~~~~~~~~~~ 271 (400)
+++++.+-.|-+= .-++..+.....+.+.. .++++ ++||..+.|+ |- ++++.++++++...+......
T Consensus 160 k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~-----D~v~~-~~tK~g~~~~---gAiv~gn~~~~~~a~~~rK~~Ggl 230 (342)
T COG2008 160 KEHGLPLHMDGARLANALVALGVALKTIKSYV-----DSVSF-CLTKGGGAPV---GAIVFGNRDFAKRARRWRKRAGGL 230 (342)
T ss_pred HHHCCCEEECHHHHHHHHHHCCCCHHHHHHHC-----CEEEE-ECCCCCCCEE---EEEEECCHHHHHHHHHHHHHHCCC
T ss_conf 98099544040889889987398889987428-----89999-1314775213---258973899999989999986562
Q ss_pred CCC--CCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCH
Q ss_conf 222--222222222346764322222211000--0000245530477603302740899862641023321133224898
Q gi|254780602|r 272 ACS--IAQWAAVEALNGPQDFVVNNRKIFEYR--RDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTD 347 (400)
Q Consensus 272 ~~~--~~q~a~~~~l~~~~~~~~~~~~~~~~~--r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~ 347 (400)
.+. +.-.+...+|++. -|.. .....+ ...+.+.|++.+|+++..|.-+-.+|+++++... +.
T Consensus 231 ~~k~r~laA~~~~~l~~~-~~~~---~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i----------~~ 296 (342)
T COG2008 231 MRKARFLAAQGLYALEDD-VWRL---AADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAI----------EA 296 (342)
T ss_pred HHHHHHHHHHHHHHHHCC-HHHH---HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCHHHH----------HH
T ss_conf 766548999999997315-8888---878889999999976532689434367766279997776788----------99
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHH
Q ss_conf 9999999987397998350228997289996--299999999999999999
Q gi|254780602|r 348 LDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFC 396 (400)
Q Consensus 348 ~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l 396 (400)
..+.. .+...|+.+.++. .-+|+.. .++++++++.+.-++.++
T Consensus 297 l~~~~-~~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 297 LRLAG-ALFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHHHC-HHHEEEEECCCCC-----CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 97515-2120012215777-----558998502499999999999999964
No 177
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=8.6e-16 Score=116.25 Aligned_cols=165 Identities=19% Similarity=0.281 Sum_probs=109.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-+.++.+..||..++.+++++||+|++++..|..-... +...|.+
T Consensus 62 ~YsR-~gNP-T~~~lE~~la~LEg----g~~a~~~sSGmAAI~~~ll~ll~~Gdhiv~~~~lYggT~~l~~~~l~~~GI~ 135 (437)
T PRK05613 62 VYSR-LTNP-TVEALENRIASLEG----GVHAVAFASGQAATTAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIE 135 (437)
T ss_pred EEEC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCE
T ss_conf 1208-9887-89999999999839----9858996589999999999972889989978987634789977677516815
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++.. -|++.++++++++||+||+=+|.|||..+.+ +++|+++ ++++++.+|+|..+.--.+ ..
T Consensus 136 ~~fvd~~------~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~i-A~~~g~~~vVDNTfatP~~----~~ 201 (437)
T PRK05613 136 TTFVENP------DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEV-AHRNQVPLIIDNTIATAAL----VR 201 (437)
T ss_pred EEEECCC------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEECCCCCCHHC----CC
T ss_conf 8994799------9999999737878559999879998653357---9999999-9876983995166520310----68
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCC-CCCCC
Q ss_conf 222111233322574146544322344544-42211
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLRI-GYAAG 253 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri-G~~v~ 253 (400)
++ .+ + --|++.|.||..+--|-=+ |.++.
T Consensus 202 Pl-~~--G---aDiVvhS~TKYl~GHsDvlgG~vv~ 231 (437)
T PRK05613 202 PL-EL--G---ADVVVASLTKFYTGNGSGLGGVLID 231 (437)
T ss_pred HH-HH--C---CCEEEEECCCCCCCCCCEEEEEEEE
T ss_conf 56-74--8---9889995551226887645169984
No 178
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=9.2e-16 Score=116.08 Aligned_cols=155 Identities=21% Similarity=0.291 Sum_probs=106.5
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877-89899999999864210133332233233454333322222223322322223333232222----2222222
Q gi|254780602|r 63 KYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGG 137 (400)
Q Consensus 63 ~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~ 137 (400)
+|--++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++.+||+|++++..|..-.. .+...|.
T Consensus 55 g~~YsR~gnP-T~~~lE~~la~LEg----~~~a~~~sSGmaAis~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi 129 (431)
T PRK08248 55 GNIYTRIMNP-TNDVFEKRIAALEG----GVGALAVSSGQAAVTYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGI 129 (431)
T ss_pred CCEEECCCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCE
T ss_conf 9633189886-79999999999839----984899546999999999997377998997278648889998742323887
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++. -|+++++++++++||+||+=+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +
T Consensus 130 ~v~~vD~-------~d~~~~~~~i~~~Tkli~~EsPsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~ 194 (431)
T PRK08248 130 TVKFVDP-------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVADIA-HRHHIPLIVDNTFASPYL----L 194 (431)
T ss_pred EEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCCCHHH----C
T ss_conf 9999899-------7757799753777459996048999874227---89999999-776985998667530321----5
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 32221112333225741465443223
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
.++ .+ + --|++.|.||.++-
T Consensus 195 ~Pl-~~--G---aDivvhS~TKYi~G 214 (431)
T PRK08248 195 RPI-EF--G---ADIVVHSATKFIGG 214 (431)
T ss_pred CHH-HH--C---CCEEEEECCEECCC
T ss_conf 834-52--8---98899966512368
No 179
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.66 E-value=5.1e-16 Score=117.62 Aligned_cols=223 Identities=14% Similarity=0.182 Sum_probs=136.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222222---222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA---LCGGIP 139 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~---~~g~~~ 139 (400)
.|+- .|.|- ++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..-..+++ ..|.++
T Consensus 46 ~YsR-~gnPT-~~~le~~la~LEg----~~~a~~~sSGmaAi~~~ll~~l~~Gd~il~~~~~Yg~t~~l~~~l~~~Gi~v 119 (384)
T PRK08574 46 KYSR-EENPT-VRPLEEKLAKLEG----GVDALAFNSGMAAISTLFFSLLKAGDEVVLPMEAYGTTLRLLKSLEKFGVRV 119 (384)
T ss_pred EEEC-CCCHH-HHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf 0438-98865-9999999999819----9718995587999999999816899989984897145999999998608579
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 22222222322210333100012212201211354210000123333211122333332011101221100000122332
Q gi|254780602|r 140 VFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN 219 (400)
Q Consensus 140 ~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s 219 (400)
..+..+ +.+.+++.++++||+||+-+|.|||..+.+ +++|+++ ++++++.+++|..+.--.+ +.+
T Consensus 120 ~~~~~~-------~~~~~~~~~~~~Tklv~~EspsNP~l~v~D---i~~ia~i-A~~~g~~~vvDNT~atP~~----~~P 184 (384)
T PRK08574 120 RLAYPS-------TEDLIEAIKESRTKLVFIETITNPTLRVID---VPEVAKA-AKDLGAILVVDNTFATPIL----YRP 184 (384)
T ss_pred EEECCC-------CHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCCCHHHH----CCH
T ss_conf 994899-------789999744788549999889998763478---5999999-9775985997377512642----680
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 221112333225741465443223445-4442211-01226875310012223322222222222234676432222221
Q gi|254780602|r 220 IVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKI 297 (400)
Q Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~ 297 (400)
+ .. + --|++.|.||.++--|- =.|.+++ .+++.+.+...+.....++++...+.++..|+. +.-..+.
T Consensus 185 l-~~--G---aDivvhS~TKyi~GHsdv~~G~vv~~~~~~~~~l~~~~~~~G~~lsp~~a~l~~rgl~T----L~lR~~~ 254 (384)
T PRK08574 185 L-EH--G---ADFVVHSLTKYIAGHNDVLGGVAVVWNGEFLEELWVWRRRLGTIMQPFEAWLVLRGLKT----LEVRFER 254 (384)
T ss_pred H-HH--C---CCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC----HHHHHHH
T ss_conf 6-64--8---98899954621038867341389835178899999999982898892347888606587----9999999
Q ss_pred CCCCCCCHHHHHHCCCCCE
Q ss_conf 1000000024553047760
Q gi|254780602|r 298 FEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 298 ~~~~r~~~~~~L~~~~g~~ 316 (400)
-.++...+.+.|++.|.++
T Consensus 255 ~~~nA~~lA~~L~~hp~V~ 273 (384)
T PRK08574 255 QCENAMAIAEFLSEHPKVR 273 (384)
T ss_pred HHHHHHHHHHHHHCCCCCC
T ss_conf 9999999999997099988
No 180
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.66 E-value=2.3e-16 Score=119.76 Aligned_cols=219 Identities=17% Similarity=0.166 Sum_probs=136.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.+..|+..++.+++.+||+|++++..|..-... +...|.+
T Consensus 46 ~YsR-~gNP-T~~~lE~~la~LEg----~~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~ 119 (370)
T PRK07582 46 TYGR-SSNP-TWRQLESALGELEG----GAAALVFGSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVT 119 (370)
T ss_pred EEEC-CCCH-HHHHHHHHHHHHCC----CCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEE
T ss_conf 5538-9986-89999999999719----9718986487999999999970899989977887779999999887506816
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110-00001223
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEH-IVYRNCQF 217 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~-l~~~~~~~ 217 (400)
+.+++ .+++.+++.++||+||+-+|.|||..+.+ +++|+++| +++++++++|..+.- +. +
T Consensus 120 v~~~~----------~~d~~~~~~~~tklv~~EspsNP~l~v~D---i~~ia~~A-~~~gi~~vVDNT~atP~~-----~ 180 (370)
T PRK07582 120 VREAP----------TAGMAEAAAGAADLVLAETPSNPGLDVVD---LARLARAC-HAAGALLVVDNTTATPLG-----Q 180 (370)
T ss_pred EEECC----------CHHHHHHHCCCCCEEEEECCCCCCCEEEC---CHHHHHHH-HHCCCEEEEECCCCCHHH-----C
T ss_conf 89538----------55178772257738999779998865335---38889999-876996999889840642-----4
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3222111233322574146544322344-54442211-012268753100122233222222222222346764322222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
.++ .+ + --|++.|.||.++--| .=.|++++ ++++.+++...+.....++++...+.++..|+. +.-..
T Consensus 181 ~Pl-~~--G---ADivvhS~TKYl~Ghsd~lgG~v~~~~~~~~~~~~~~~~~~G~~~sP~~a~lllrGl~T----L~lRm 250 (370)
T PRK07582 181 RPL-EL--G---ADLVVASDTKALSGHSDLLAGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLAT----LGLRF 250 (370)
T ss_pred CCH-HC--C---CCEEEEEECEEECCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC----HHHHH
T ss_conf 800-21--8---98698850435247887403287258888999999999852887887889999861086----88999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
++-.++...+.+.|++.|.++
T Consensus 251 ~r~~~nA~~lA~~L~~hp~V~ 271 (370)
T PRK07582 251 ERQCQNALAVAELLREHPAVR 271 (370)
T ss_pred HHHHHHHHHHHHHHHCCCCCC
T ss_conf 999878999999997099967
No 181
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=1.6e-15 Score=114.54 Aligned_cols=330 Identities=17% Similarity=0.181 Sum_probs=190.6
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.+|+..+|+..|.- .+. -+|.|.+|+++.+++-. |....-..++++.+|+.+.... ..+.|.+++++++|.
T Consensus 26 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~~~--~~~~~~~~~~~~~la~~l~~~~----~~~~v~f~~sGsEAv 99 (377)
T PRK02936 26 NNGKQYLDFTSGIAVCNLGHCHPTVTKAVQEQLDDIW--HVSNLFTNSLQEEVASLLTENS----AGDLVFFCNSGAEAN 99 (377)
T ss_pred CCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC--CCCCHHCCHHHHHHHHHHHCCC----CCCEEEEECCHHHHH
T ss_conf 9879999966298860105897999999999986578--8662010489999999732068----878899968777899
Q ss_pred CCCCCCCC-CC-CCCCCCCCCCCCCCCCCC-CCCCCCCCC---CCCCCCCCCC--CHHHHHHCCCCCCCCCEEECCC-CC
Q ss_conf 22222223-32-232222333323222222-222222222---2222223222--1033310001221220121135-42
Q gi|254780602|r 105 FNALMATV-NM-GDEVLIPRPYWVSYPDMV-ALCGGIPVF---VDTQQDDNFQ--VSPEKLEQAITPKTKWLFLNSP-SN 175 (400)
Q Consensus 105 ~~~~~~~~-~~-Gd~Vlv~~P~y~~y~~~~-~~~g~~~~~---v~~~~~~~~~--~d~~~l~~~i~~~~k~i~l~nP-~N 175 (400)
..+++.-- .. ...|+...-+|-.....+ ...|-.... -|+.++-.+. .|++.+++.+.++..++++ -| +.
T Consensus 100 e~AiklAr~~tgr~~ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~~~~~iAavi~-EPiqg 178 (377)
T PRK02936 100 EAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFNDIKALEEVMNEEVAAVML-EVVQG 178 (377)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCEEEEEE-ECCCC
T ss_conf 99999988755998799987855114432001058743345778999981446745899998516896789999-78767
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 10000-12333321112233333201110122110000012233-22211123332257414654432234454442211
Q gi|254780602|r 176 PSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG 253 (400)
Q Consensus 176 PTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~ 253 (400)
-.|.+ .+++-++++.++| +++|+++|.||++..+.=.|.-+. .-..+.|+ |++ ++|..+ .|+-+|.+++
T Consensus 179 ~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~~a~e~~gv~PD-----ii~--~gK~l~-~G~P~sav~~ 249 (377)
T PRK02936 179 EGGVIPADLSFLQEVQTLC-KKFGALLIIDEVQTGIGRTGTLFAYEQFGLEPD-----IVT--VAKGLG-NGIPVGAMIG 249 (377)
T ss_pred CCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCC-----EEE--EEHHHC-CCCCCCCEEC
T ss_conf 8897689999999999999-982984571221127765567203644498876-----788--620102-7898733303
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHH----CCCCCEEEECCCCEEEE
Q ss_conf 0122687531001222332222222222223467--64322222211000000024553----04776033027408998
Q gi|254780602|r 254 ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQ----GVPGIRYMIPDGAFYLY 327 (400)
Q Consensus 254 ~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~----~~~g~~~~~p~g~~y~~ 327 (400)
.+++.+.+.......+.+.+.+...++.+.|+.- ++.+++ .+++-+.+.+.|+ ..+.+.-++.. |+++=
T Consensus 250 ~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~----~~~~g~~l~~~L~~~~~~~~~i~~vRG~-Gl~~g 324 (377)
T PRK02936 250 KKELGSAFTAGSHGSTFGGNYLAMAAAKEVLQVIKQPSFLEE----VQEKGEYFLQKLQEELQHVECVKNIRGK-GLMIG 324 (377)
T ss_pred CHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHHHHHHHCCCCEEEEEEC-CEEEE
T ss_conf 287763037899888898599999999999999851119999----9999999999999984369966771255-69999
Q ss_pred EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHH
Q ss_conf 62641023321133224898999999998739799835022899728999--6299999999999999999
Q gi|254780602|r 328 PSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l 396 (400)
+++. .+..+++..+ .++|+++.|+. ++.||++ +..+++++++++++|.+.|
T Consensus 325 ie~~-------------~~~~~~~~~~-~~~Gll~~~~g----~~~ir~~PpL~it~~ei~~~l~~l~~aL 377 (377)
T PRK02936 325 IECT-------------HEVAPFIEQL-REEGLLVLQAG----PNVIRLLPPLIVTKEELDQAVYMLKKVL 377 (377)
T ss_pred EEEC-------------CCHHHHHHHH-HHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 9977-------------8599999999-96992994368----9989996990288999999999999869
No 182
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.65 E-value=4e-15 Score=112.19 Aligned_cols=339 Identities=14% Similarity=0.118 Sum_probs=188.8
Q ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 869972665658--97498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|++.||+..| ...+. -+|.|.+|+++.+++-.+ ....-..+.+..+|+.+.... -.++|.+++++++|.
T Consensus 36 ~dG~~yLD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~--~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~SGsEAv 109 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWH--TGNGYTNEPVLRLAKKLIDAT----FADRVFFCNSGAEAN 109 (406)
T ss_pred CCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHCC----CCCEEEEECCHHHHH
T ss_conf 99899999160887452389989999999999865566--778736889999999987305----876499948777899
Q ss_pred CCCCCCCC-------CCC-CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC--CCHHHHHHCCCCCCCCCEEE
Q ss_conf 22222223-------322-32222333323222222222222222----222222322--21033310001221220121
Q gi|254780602|r 105 FNALMATV-------NMG-DEVLIPRPYWVSYPDMVALCGGIPVF----VDTQQDDNF--QVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 105 ~~~~~~~~-------~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l 170 (400)
..+++..- .++ +.|+...-+|-.........+..+.+ .|+.++-.+ .-|++.+++.+.+++-++++
T Consensus 110 e~AiKlAr~~~~~~~~~~r~~Ii~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~aAviv 189 (406)
T PRK12381 110 EAALKLARKYAHDRYGNHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV 189 (406)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEE
T ss_conf 99999999999863899987699967876788322321578733356778899744356522299999973888359999
Q ss_pred CCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 135-4210000-123333211122333332011101221100000122332-2211123332257414654432234454
Q gi|254780602|r 171 NSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-| +--.|.+ .+++-+++|-++| +++|+++|.||+...+.-.|.-+.. -..+.|+ |++ ++|.++ .|+-
T Consensus 190 -EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tG~GRtG~~~a~~~~gv~PD-----iv~--~gK~lg-gG~P 259 (406)
T PRK12381 190 -EPIQGEGGVIPADKAFLQGLRELC-DRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD-----VLT--TAKALG-GGFP 259 (406)
T ss_pred -ECCCCCCCCCCCCHHHHHHHHHHE-ECCCCEEECCCCEECCCCCCCCCCCCCCCCCCC-----EEE--ECCCCC-CCCE
T ss_conf -064566883268989999999752-115837974442007776667653546678998-----899--742024-8860
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECCCC
Q ss_conf 44221101226875310012223322222222222234676432222221100000002455304----77603302740
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPDGA 323 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~g~ 323 (400)
+|.+++.+++.+.+.......+.+.+.+...++.+.|+.-++ ++..+..+++-+++.+.|+++ +-+.-++.. |
T Consensus 260 ~sav~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~~l~~~~~~i~dVRG~-G 336 (406)
T PRK12381 260 IGAMLTTEKYASVMTVGTHGTTYGGNPLASAVAGKVLDLINT--PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGL-G 336 (406)
T ss_pred EEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC-C
T ss_conf 489987288786528887663898699999999999999975--5699999999999999999988738988863025-2
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+++=+.+... ......+++..+ .++||++.++. ++.||++ +..+++++++++++|.+.|++.
T Consensus 337 Lm~giel~~~---------~~~~~~~l~~~~-~~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~~v 400 (406)
T PRK12381 337 LLIGCVLNAE---------YAGKAKQISQEA-AKAGVMVLIAG----PNVVRFAPALNVSEEEIATGLDRFARACERF 400 (406)
T ss_pred EEEEEEECCC---------CCCHHHHHHHHH-HHCCEEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6999996488---------753599999999-97996996079----9969997995389999999999999999999
No 183
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.65 E-value=4.7e-15 Score=111.74 Aligned_cols=345 Identities=14% Similarity=0.126 Sum_probs=185.6
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|. ..+. -+|.|.+|+.+.++...+ +.......+....+++.+.+..+. +.+.|.+++++++|.
T Consensus 33 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGsEA~ 109 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH-FSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTEAV 109 (413)
T ss_pred CCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHH
T ss_conf 99799999670676446578988999999999974897-257866888999999999985699--848799818777999
Q ss_pred CCCCCCCC-C-CCCCCCCCCCCCCCCCCCC-CCCCC------------CCCCCCCC----CCCCCCCHHHHHHCCCCC--
Q ss_conf 22222223-3-2232222333323222222-22222------------22222222----223222103331000122--
Q gi|254780602|r 105 FNALMATV-N-MGDEVLIPRPYWVSYPDMV-ALCGG------------IPVFVDTQ----QDDNFQVSPEKLEQAITP-- 163 (400)
Q Consensus 105 ~~~~~~~~-~-~Gd~Vlv~~P~y~~y~~~~-~~~g~------------~~~~v~~~----~~~~~~~d~~~l~~~i~~-- 163 (400)
..+++..- . ..+.|+...-+|-.....+ ...|. ....+|.. ......-|++++++.+.+
T Consensus 110 e~AiklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~l~~~~~~~~ 189 (413)
T cd00610 110 EAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHP 189 (413)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 99999999973998899986884787663344137832245778888996680898765554322778999999997389
Q ss_pred -CCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCC
Q ss_conf -1220121135-4210000-12333321112233333201110122110000012233-222111233322574146544
Q gi|254780602|r 164 -KTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 164 -~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK 239 (400)
++-++++ -| ..-.|.+ .+++-+++|.++| +++++++|.||+...|.=.|.-+. .-..+.|+ |+ +++|
T Consensus 190 ~~iAavi~-EPi~g~~G~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD-----iv--t~gK 260 (413)
T cd00610 190 EEVAAVIV-EPIQGEGGVIVPPPGYLKALRELC-RKHGILLIADEVQTGFGRTGKMFAFEHFGVEPD-----IV--TLGK 260 (413)
T ss_pred CCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHE-EECCCEEEEEECEECCCCCCCCCHHHHCCCCCC-----EE--EECC
T ss_conf 97899999-798788998738889978886328-605806985202007775454312332581787-----56--5233
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC----CC
Q ss_conf 322344544422110122687531--001222332222222222223467643222222110000000245530----47
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIV--LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG----VP 313 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~ 313 (400)
.++ .|+-+|.+++.+++.+.+.. .....+.+.+.+...++.+.|+.-++ ++..+..+++-+++.+.|++ .+
T Consensus 261 ~lg-gG~Pisav~~~~~i~~~~~~~~~~h~~T~~gnp~~~Aaa~a~L~~i~~--e~l~~~~~~~g~~l~~~L~~l~~~~~ 337 (413)
T cd00610 261 GLG-GGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE--EGLLENAAELGEYLRERLRELAEKHP 337 (413)
T ss_pred CCC-CCCCCEEEEECHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 456-889860477759999986338850677888884999999999999842--56999999999999999999997489
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHH
Q ss_conf 7603302740899862641023321133224898999999998739799835022899728999--62999999999999
Q gi|254780602|r 314 GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVR 391 (400)
Q Consensus 314 g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~r 391 (400)
-+.-+...|-|+ =+.+.+......+. ......+...+ .++||++.|.. .+.+|++ +..+++++++++++
T Consensus 338 ~i~~vrG~Gl~~-gie~~~~~~~~~~~---~~~~~~i~~~~-~~~Gvl~~~~g----~~~l~~~Ppl~it~~eid~~~~~ 408 (413)
T cd00610 338 LVGDVRGRGLMI-GIELVKDRATKPPD---KELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGLDA 408 (413)
T ss_pred CCEEEEEECEEE-EEEEECCCCCCCCC---HHHHHHHHHHH-HHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 936964324499-99993687767758---99999999999-97994891179----99899978836899999999999
Q ss_pred HHHHH
Q ss_conf 99999
Q gi|254780602|r 392 IKRFC 396 (400)
Q Consensus 392 l~~~l 396 (400)
|.+.|
T Consensus 409 l~~aL 413 (413)
T cd00610 409 LDEAL 413 (413)
T ss_pred HHHHC
T ss_conf 99869
No 184
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.65 E-value=5.8e-16 Score=117.30 Aligned_cols=334 Identities=16% Similarity=0.163 Sum_probs=184.2
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCC--CCC-------CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838875--699-------877898999999998642101333322332334543
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGET--KYT-------AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~--~Y~-------~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
++.||+.==+-.--.+++.++|+.+-= +|.. -|+ ..+...+..+.+++|+ |+ |++.++||++
T Consensus 17 ~~~in~~piq~gg~lt~ea~ka~~~~g-dgysvcd~C~~~LD~i~~Ppi~~f~~~la~fl----g~----D~~rlvnGar 87 (386)
T PRK09331 17 EEMINLDPIQRGGRLTPEARKALIEYG-DGYSVCDYCKGRLDKIEKPPIADFHEDLAKFL----GM----DEARVTPGAR 87 (386)
T ss_pred HCCCCCCHHHHCCCCCHHHHHHHHHHC-CCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHH----CC----CEEEECCCCC
T ss_conf 313356735526968999999999974-88736645411011255998899999999984----99----6378528842
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHH----HHHHCCCCC--CCCCEEECCCC
Q ss_conf 33322222223322322223333-232222222222222222222223222103----331000122--12201211354
Q gi|254780602|r 102 HVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFVDTQQDDNFQVSP----EKLEQAITP--KTKWLFLNSPS 174 (400)
Q Consensus 102 ~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~----~~l~~~i~~--~~k~i~l~nP~ 174 (400)
+|++.++.++|+|||.|+++.-+ |..| ..+..+|+.+++++...+..|.+.+ +.+++.+.+ +.+++++. .
T Consensus 88 ~g~qAv~~a~c~~GD~VIl~rnaHyS~~-~A~elaG~~~~~v~~~~~~~~~I~~~~~~~~Iee~~~e~gk~~aL~ll--t 164 (386)
T PRK09331 88 EGKFAVMHALCKKGDYVVLDGLAHYTSY-VAAERAGLNVREVPKTGYPDYRITPEAYAEKIEEVEDETGKPPALALL--T 164 (386)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCHHHHH-HHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEE--E
T ss_conf 7899999986369997984484059999-999975985899368777234508005799999999861898559999--6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 21000012333321112233333201110122110000012233222111233322574146544322344544422110
Q gi|254780602|r 175 NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 175 NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
|||+..=...++++|+++| +++|+.++.||+|.. +.-+.+...+ ++ -+++.|..|+.+..+ .+|.+...
T Consensus 165 ~pdy~yGn~~d~~~i~~ia-h~~~ip~lvdeA~~~----~~~P~~a~~~--Ga---D~~v~S~HK~~~s~t-~sgvL~~~ 233 (386)
T PRK09331 165 HVDGNYGNLHDAKKIAKVA-HQYGIPLLLNGAYTV----GRMPVDGKEL--GA---DFIVGSGHKSMAASA-PSGVLATT 233 (386)
T ss_pred CCCCCCCCHHHHHHHHHHH-HHCCCCEEEECCCCC----CCCCCCHHHC--CC---CEEEEECCCCCCCCC-CCEEEECC
T ss_conf 8886644546389999999-874981898144335----7789746663--99---889863454442346-31244304
Q ss_pred HHHHHHHHH-----------HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE--ECC
Q ss_conf 122687531-----------0012223322222222222234676432222221100000002455304776033--027
Q gi|254780602|r 255 LSLIKSMIV-----------LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM--IPD 321 (400)
Q Consensus 255 ~~li~~l~~-----------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~--~p~ 321 (400)
.+.++...+ +.+.+..+.+.....| -|..-.+.+... ...-++.+++.+.|++++|+.+. .|.
T Consensus 234 ~e~~d~v~R~s~~~~~Kev~mLgcTs~g~psy~LMA---Sfd~vrerv~~~-d~ev~~ar~~~~El~kIeG~~~lge~P~ 309 (386)
T PRK09331 234 EEYADKVFRTSKKFGVKEVELLGCTLRGAPLVTLMA---SFPHVKERVKNW-DEEVEKARWFVDELEKIEGFKQLGEKPR 309 (386)
T ss_pred CCHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHH---CCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCCHHHCCCCCC
T ss_conf 530155652264305789988536334640899980---659999999877-8999999999999860876554065778
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE-CCCCCCCCCEEE-EEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 408998626410233211332248989999999987397998-350228997289-996299999999999999999860
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV-QGSSFGHGPSIR-ISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~-pG~~Fg~~~~iR-is~~~~~e~l~~al~rl~~~l~~l 399 (400)
.-=....+-+.+. ...........+|.+. |++.||... ||. -+.+- .+|+.+.|+++.-++.|++..+++
T Consensus 310 ~hdl~~fdtt~~~---~ia~~~~~~Gy~l~~~-Lk~r~I~ge~sg~----t~~lkl~s~G~t~E~v~~li~A~keIaeky 381 (386)
T PRK09331 310 NHDLMRFETPSFD---EIAKKHKRRGFFLYEE-LKKRGIHGIKPGL----TKEFKLSTYGLTWEQVEYVADSFKEIAEKY 381 (386)
T ss_pred CCCCEEECCCCEE---EEHHHCCCCCEEHHHH-HHHCCCEEEECCC----CEEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7774353376412---2232048660567999-9767964995571----017878861787899999999999999982
No 185
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=2.1e-15 Score=113.88 Aligned_cols=158 Identities=15% Similarity=0.200 Sum_probs=107.6
Q ss_pred CCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCC
Q ss_conf 75699877-89899999999864210133332233233454333322222223322322223333232222----22222
Q gi|254780602|r 61 ETKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALC 135 (400)
Q Consensus 61 ~~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~ 135 (400)
..+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|+++...|..-.. .+...
T Consensus 50 ~~g~~YsR~gNP-T~~~lE~~la~LEg----g~~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~ 124 (432)
T PRK06702 50 AEGYIYTRIGNP-TLAAFEQKLAELEG----GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKL 124 (432)
T ss_pred CCCCEECCCCCH-HHHHHHHHHHHHHC----CCCEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEECC
T ss_conf 689603189986-79999999999839----9828985328999999999962899989984887121799986402028
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 22222222222232221033310001221220121135421000012333321112233333201110122110000012
Q gi|254780602|r 136 GGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC 215 (400)
Q Consensus 136 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~ 215 (400)
|.++.+++.+ .+.+++++.++++||+||+-+|.|||..+.+ +++|+++| +++++.+++|..+.-=.
T Consensus 125 GI~v~~vd~~------~~~~~~~~~~~~~Tkli~~EtpsNP~l~v~D---i~~ia~iA-~~~gi~~vVDNTfatP~---- 190 (432)
T PRK06702 125 GIDVTFFNPN------LTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAA-KELEVPFIVDNTLATPY---- 190 (432)
T ss_pred CEEEEEECCC------CCHHHHHHHCCCCCEEEEEEECCCCCCEEEC---HHHHHHHH-HHCCCEEEEECCCCCCC----
T ss_conf 8799987899------9999999745787508999727999732027---99999999-76698189635764301----
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 2332221112333225741465443223
Q gi|254780602|r 216 QFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 216 ~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
-..++ .+ + --|+++|.||..+-
T Consensus 191 ~~rPl-~~--G---aDiVvhS~TKyi~G 212 (432)
T PRK06702 191 LCQAF-EH--G---ANIIVHSTTKYIDG 212 (432)
T ss_pred CCCCH-HC--C---CCEEEEECCCCCCC
T ss_conf 04620-12--8---98999853421568
No 186
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.64 E-value=4.3e-15 Score=111.99 Aligned_cols=339 Identities=15% Similarity=0.144 Sum_probs=187.9
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|.- .+. -+|.|.+|+++.+++-.+ ....-..+.+..+|+.+.+.. ..|.|++++++++|.
T Consensus 37 ~dG~~ylD~~~g~~~~~lGh~~p~I~~Ai~~Q~~~l~~--~~~~~~~~~~~~lae~L~~~~----~~drv~f~~SGSEAv 110 (403)
T PRK05093 37 QQGREYIDFAGGIAVTALGHCHPALVKALKEQGEKLWH--ISNVFTNEPALRLAKKLVDAT----FAERVFFANSGAEAN 110 (403)
T ss_pred CCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHCC----CCCEEEEECCHHHHH
T ss_conf 99799999550888503289979999999999875577--757414889999999986416----877599838677899
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC--CCHHHHHHCCCCCCCCCEEE
Q ss_conf 2222222-------3322-322223333232222222222222222----22222322--21033310001221220121
Q gi|254780602|r 105 FNALMAT-------VNMG-DEVLIPRPYWVSYPDMVALCGGIPVFV----DTQQDDNF--QVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 105 ~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v----~~~~~~~~--~~d~~~l~~~i~~~~k~i~l 170 (400)
..+++.- ..+| ..|+...-+|-.........+..+.+- |...+-.. ..|++++++.+.+++-++++
T Consensus 111 E~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~iaAvii 190 (403)
T PRK05093 111 EAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAALKAVIDDKTCAVVV 190 (403)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHHHHCCCCCEEEEEE
T ss_conf 99999999999972899875477775886888368776258801102778999775655633688886033774479999
Q ss_pred CCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 135-4210000-123333211122333332011101221100000122332-2211123332257414654432234454
Q gi|254780602|r 171 NSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-| +.=.|.+ .+++-+++|.++| +++|+++|.||++..+.=.|.-+.. -..+.|+ |+ .++|..+ .|+-
T Consensus 191 -EPi~g~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tG~GRtG~~fa~e~~gv~PD-----iv--~~gKglg-gG~P 260 (403)
T PRK05093 191 -EPIQGEGGVIPATPEFLQGLRELC-DKHNALLIFDEVQTGMGRTGDLYAYMHYGVTPD-----IL--TSAKALG-GGFP 260 (403)
T ss_pred -ECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCC-----EE--EECCCCC-CCCC
T ss_conf -576678997589999999999863-016837986013426887777522236898998-----89--9730015-8864
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECCCC
Q ss_conf 44221101226875310012223322222222222234676432222221100000002455304----77603302740
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPDGA 323 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~g~ 323 (400)
+|.+++.+++.+.+.......+.+.+.+...++.+.|+.-++ ++..+..+++-+++.+.|+++ +.+.-++..|
T Consensus 261 lsav~~~~~i~~~~~~~~~g~T~~g~pla~aaala~L~~i~~--~~l~~~a~~~G~~l~~~L~~l~~~~~~i~~VRG~G- 337 (403)
T PRK05093 261 IGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINT--PEVLEGVKAREQRFVDGLQKINEKYGVFSEIRGKG- 337 (403)
T ss_pred EEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC-
T ss_conf 279987288786507877265898589999999999999963--44999999999999999999986289826665412-
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+++=+++.+.. .....++...++ +.|+.+.++. ++.||++ +..+++++++++++|.+.+.++
T Consensus 338 lm~giel~~~~---------~~~a~~i~~~~~-~~Gll~~~~g----~n~irl~PPL~it~~eid~~l~~l~~al~eV 401 (403)
T PRK05093 338 LLIGAELNEQY---------KGRARDFLYAAA-EEGVMVLVAG----PDVLRFAPSLVIPDADIDEGLARFEKAVAKV 401 (403)
T ss_pred EEEEEEECCCC---------CHHHHHHHHHHH-HCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 69999965875---------216999999999-6892895279----9979997884489999999999999999998
No 187
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.64 E-value=7.4e-15 Score=110.55 Aligned_cols=333 Identities=18% Similarity=0.187 Sum_probs=186.2
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.+|+..+|+..|- ..+. -+|.|.+|+.+.+++-. +....-.-+.+..+|+.+.+..+ .+.|++++++++|.
T Consensus 36 ~dG~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~--h~~~~~~~~~~~~lae~L~~~~~----~~~v~f~~sGseAv 109 (398)
T PRK02627 36 DDGKEYLDFLAGIAVNSLGHAHPKLVEAIQEQAAKLI--HTSNLYYIPPQEELAEKLVELSG----MDKVFFCNSGAEAN 109 (398)
T ss_pred CCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHCC----CCEEEEECCHHHHH
T ss_conf 9889999867178749427898999999999998567--86665467089999999975249----98799828779999
Q ss_pred CCCCCCC-------CCCCC-CCCCCCCCCCCCCCC-CCCCCCCCC---CCCCCCCCCCC--CHHHHHHCCCC-CCCCCEE
Q ss_conf 2222222-------33223-222233332322222-222222222---22222223222--10333100012-2122012
Q gi|254780602|r 105 FNALMAT-------VNMGD-EVLIPRPYWVSYPDM-VALCGGIPV---FVDTQQDDNFQ--VSPEKLEQAIT-PKTKWLF 169 (400)
Q Consensus 105 ~~~~~~~-------~~~Gd-~Vlv~~P~y~~y~~~-~~~~g~~~~---~v~~~~~~~~~--~d~~~l~~~i~-~~~k~i~ 169 (400)
..++... ..+|. +|+...-+|-..... ....|.... +-|+.++-.+. .|++++++.+. +++-+++
T Consensus 110 E~AiKlAr~y~~~~~~~~r~~ii~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~iAAvi 189 (398)
T PRK02627 110 EAAIKLARKYGHTKGGIEKPEIITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVPFNDIEALEAAINNPRTAAVL 189 (398)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHCCCCEEEEE
T ss_conf 99999999998864788886799953786999751001378822236767888880562477299999984589879999
Q ss_pred ECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 1135-421000-0123333211122333332011101221100000122332-221112333225741465443223445
Q gi|254780602|r 170 LNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 170 l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
+ -| +.-.|. +.+++.++++.++| +++|+++|.||+...|.=.|.-+.. -..+.|+ |+ +++|..+ .|+
T Consensus 190 ~-EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--~~gKgl~-gG~ 259 (398)
T PRK02627 190 L-EPIQGEGGVNPADKEYLQALRELC-DENNILLILDEVQTGMGRTGKLFAYQHYGIEPD-----IM--TLAKGLG-GGV 259 (398)
T ss_pred E-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEEEECCCCCCCCCCCCHHHHCCCCCCC-----EE--EECCCCC-CCC
T ss_conf 8-278888898658888999999998-650740775300017785565104332697888-----57--7600024-889
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHH----CCCCCEEEEC
Q ss_conf 44422110122687531001222332222222222223467--64322222211000000024553----0477603302
Q gi|254780602|r 247 RIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQ----GVPGIRYMIP 320 (400)
Q Consensus 247 RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~----~~~g~~~~~p 320 (400)
-+|.+++.+++.+.+..-....+.+.+++...++.+.|+.- ++.+++ .+++-+.+.+.|+ +.+.+.-++.
T Consensus 260 Plsav~~~~~i~~~~~~g~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~v~~vRG 335 (398)
T PRK02627 260 PIGAVLAKGKAADVFTPGDHGSTFGGNPLACAAALAVLDIIEEEGLLEN----AAERGEYLRAGLRELLEKYPIIKEVRG 335 (398)
T ss_pred CCCCEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 8712431699996367998788899998999999999999986489999----999999999999999971998367732
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 740899862641023321133224898999999998739799835022899728999--629999999999999999986
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
.| +++=+++. .+..+++..++ +.|+++.|.. ++.+|+. +..+++++++++++|.+.|+.
T Consensus 336 ~G-l~~giel~-------------~~~~~~~~~~~-~~Gll~~~~g----~~~ir~~PPL~it~~eid~~~~~l~~al~e 396 (398)
T PRK02627 336 LG-LMIGIELK-------------RPAKELVKKAL-EKGLLINVTG----DNVLRLLPPLIISKEEIDELVDRLDEVLKE 396 (398)
T ss_pred CC-EEEEEEEC-------------CCHHHHHHHHH-HCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 25-79999967-------------87999999999-7897895079----998999889208999999999999999998
Q ss_pred C
Q ss_conf 0
Q gi|254780602|r 399 L 399 (400)
Q Consensus 399 l 399 (400)
+
T Consensus 397 v 397 (398)
T PRK02627 397 L 397 (398)
T ss_pred H
T ss_conf 6
No 188
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.64 E-value=5.3e-15 Score=111.43 Aligned_cols=337 Identities=15% Similarity=0.162 Sum_probs=187.8
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.+|+..+|+..|.- .+. -+|.|.+|+++.++.-. +....-..+-+..+|+.+.... -.+.|.+++++++|.
T Consensus 32 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~--~~~~~~~~~~~~~la~~L~~~~----~~~~v~f~~sGsEA~ 105 (397)
T TIGR03246 32 QQGKEYIDFAGGIAVNALGHAHPELVKALIEQADKLW--HIGNGYTNEPVLRLAKKLVDAT----FADKVFFCNSGAEAN 105 (397)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHHC----CCCEEEECCCHHHHH
T ss_conf 9879999946348766557898899999999996577--7768634889999999997514----877699728677899
Q ss_pred CCCCCCCC-------CCC-CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCC--CCHHHHHHCCCCCCCCCEEE
Q ss_conf 22222223-------322-32222333323222222222222222----222222322--21033310001221220121
Q gi|254780602|r 105 FNALMATV-------NMG-DEVLIPRPYWVSYPDMVALCGGIPVF----VDTQQDDNF--QVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 105 ~~~~~~~~-------~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l 170 (400)
..+++.-- .++ ..|+...-+|-.........+..+.+ -|...+-.. .-|++.+++.+.+++-++++
T Consensus 106 e~AlklAr~~~~~~~~~~k~~iis~~~~yHG~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~iaAvi~ 185 (397)
T TIGR03246 106 EAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIV 185 (397)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCEEEEEE
T ss_conf 99999999999851799976899972786898564104689965567888999764204523399999852887379999
Q ss_pred CCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 135-4210000-12333321112233333201110122110000012233-22211123332257414654432234454
Q gi|254780602|r 171 NSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-| +.-.|.+ .+++.++++-++| +++|+++|.||+...|.=.|.-+. .-..+.|+ |++ ++|..+ .|+-
T Consensus 186 -EPv~g~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PD-----iv~--~gK~l~-gG~P 255 (397)
T TIGR03246 186 -EPIQGEGGVVPADPAFLKGLRELC-DRHNALLIFDEVQTGVGRTGELYAYMHYGVTPD-----ILT--SAKALG-GGFP 255 (397)
T ss_pred -ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCEEECCCCCCCCCHHHCCCCCCC-----EEE--ECCCCC-CCCE
T ss_conf -387788898738889999999999-985935863412207877778314322698998-----788--742246-8840
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECC
Q ss_conf 4422110122687531001222332222222222223467--6432222221100000002455304----776033027
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPD 321 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~ 321 (400)
+|.+++.+++.+.+.......+.+.+.+...++.+.|+.- ++.++ ..+++-+++.+.|+++ +-+.-++..
T Consensus 256 ~sav~~~~~i~~~~~~~~h~~T~~gnpl~~aaala~L~~i~~e~l~~----~~~~~g~~l~~~L~~l~~~~~~i~~VRG~ 331 (397)
T TIGR03246 256 IGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLA----GVKQRHDLFVDGLEKINARYNVFSEIRGK 331 (397)
T ss_pred EEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 48997448888651877738668829999999999999998547999----99999999999999987417987754224
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 40899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+++-+++.+. ......+++..++ +.||++.++. ++.+|++ +..+++++++++++|.+.++++
T Consensus 332 -Glm~giel~~~---------~~~~a~~i~~~~~-~~Gll~~~~g----~n~lrl~PPL~it~eeid~~l~~l~~al~~v 396 (397)
T TIGR03246 332 -GLLIGAVLTEA---------YQGKAKQFVNAAA-EEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred -CEEEEEEECCC---------CCCHHHHHHHHHH-HCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -35999997278---------6335999999999-7892893079----9979997885189999999999999999986
No 189
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.64 E-value=2.4e-15 Score=113.58 Aligned_cols=164 Identities=16% Similarity=0.204 Sum_probs=108.7
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 6998778989999999986421013333223323345433332222222332232222333323222222----222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMV----ALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~----~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|+++...|..-..++ ...|.+
T Consensus 62 ~YsR-~gNP-T~~~LE~~la~LEg----~~~a~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~ 135 (436)
T PRK07812 62 IYTR-IMNP-TQDVVEQRIAALEG----GVAALFLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIE 135 (436)
T ss_pred EECC-CCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCC
T ss_conf 4208-9886-69999999999829----9878996479999999999961889889994886687899999997652874
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++ + .-|+++++++++++||+||+=+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +.
T Consensus 136 v~fv~---d---~~d~~~~~~~i~~~Tklv~~EtpsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNTfatP~~----~~ 201 (436)
T PRK07812 136 VSFVE---D---PDDLDSWRAAVRPNTKAFFAETISNPQIDILD---IPGVAEVA-HEAGVPLIVDNTIATPYL----IR 201 (436)
T ss_pred EEEEC---C---CCCHHHHHHHCCCCCEEEEEECCCCCCEECCC---HHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 16967---9---98899999745867439999648998605236---69999999-985992996268646230----37
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCC
Q ss_conf 2221112333225741465443223445444-221
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAA 252 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v 252 (400)
++ .+ + --|++.|.||..+--|=-+| .++
T Consensus 202 Pl-~~--G---aDivihS~TKyi~GHsDvlgG~vv 230 (436)
T PRK07812 202 PL-EH--G---ADIVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred CC-CC--C---CCEEEEECCEECCCCCCCEEEEEE
T ss_conf 64-14--8---988999645031589770436998
No 190
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.63 E-value=1.7e-15 Score=114.51 Aligned_cols=222 Identities=17% Similarity=0.227 Sum_probs=136.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877898999999998642101333322332334543333222222233223222233332322222----2222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.++.||..++. ++.+||+|++.+..|..-... +...|.+
T Consensus 43 ~Y~R-~~nP-T~~~lE~~la~LEg----~~~a~~~sSGmaAi~a~l~-~~~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~ 115 (377)
T PRK07671 43 EYSR-TGNP-TRAALEELIAVLEN----GHAGFAFGSGMAAITAVMM-LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIE 115 (377)
T ss_pred CCCC-CCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHH-HHCCCCEEEECCCCCCCHHHHHHHHHHHCCCE
T ss_conf 1418-9886-69999999999839----8627751678899999999-86899989982898277899999888636976
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
+.+++. -|+++++++++++||+||+-+|.|||-.+.+ +++|+++ |+++++.+++|..+.--.+ ..
T Consensus 116 v~fvd~-------~d~~~~~~ai~~~Tklv~~EspsNP~l~v~D---i~~ia~i-A~~~g~~~vVDNT~atP~~----~~ 180 (377)
T PRK07671 116 HTFVDT-------TNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTL-AKEKGLLTIVDNTFMTPYW----QS 180 (377)
T ss_pred EEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCEECC---HHHHHHH-HHHCCCEEEECCCCCCCCC----CC
T ss_conf 999438-------8868899647888449999789998875016---7999999-9982996985176422022----78
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2221112333225741465443223445-444221-10122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGL-RIGYAA-GALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~-RiG~~v-~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--|= =.|.++ .++++.+.+...+.....++++...+.+...|+. +.-..+
T Consensus 181 Pl-~~--G---aDivvhS~TKyl~GHsD~~~G~vv~~~~~~~~~~~~~~~~~G~~lsP~~a~L~lRGL~T----L~lRm~ 250 (377)
T PRK07671 181 PI-SL--G---ADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSFLLLRGLKT----LGIRME 250 (377)
T ss_pred HH-HH--C---CCEEEEECCCEECCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 77-72--8---87899945753047877525289967789999999999863577884777898706886----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE
Q ss_conf 11000000024553047760
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~ 316 (400)
+-.++...+.+.|++.|.++
T Consensus 251 r~~~nA~~vA~~L~~hp~V~ 270 (377)
T PRK07671 251 EHETNSRAIAEFLNNHPKVN 270 (377)
T ss_pred HHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999986199844
No 191
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.63 E-value=1.9e-15 Score=114.21 Aligned_cols=325 Identities=14% Similarity=0.160 Sum_probs=188.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899999999999838875699877898999999998642101333322332334543333222222233223222233
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPR 122 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~ 122 (400)
.+.|+.|++||.+ ....+.+ -..++-+.+.+.+++.++..-+..-|+++..++.|+..++..+++|||+|++.+
T Consensus 14 t~v~~~V~~Am~~----~~~~~~~--eF~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl~~~gdkvLv~~ 87 (368)
T PRK13479 14 LTTSRTTREAMLR----DWGSWDD--DFNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCCHHHHHHHCC----CCCCCCH--HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEC
T ss_conf 9999999997475----7789877--899999999999999957888707999716867999999961547999799981
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3323--222222222222222222222322210333100012--212201211354210000123333211122333332
Q gi|254780602|r 123 PYWV--SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH 198 (400)
Q Consensus 123 P~y~--~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~ 198 (400)
=+.. -+..+++.+|..++.++.+... .+|++++++++. ++.+++++++---.||...+ +++|.++| ++|+
T Consensus 88 ~G~FG~R~~~ia~~~g~~v~~l~~~~g~--~~~~~~ve~~L~~~~~~~~v~~vH~ETSTGvln~---l~~i~~~~-~~~~ 161 (368)
T PRK13479 88 NGAYGARIAKIAEYLGIAHVVLDTGEDE--PPDAAAVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVV-KRHG 161 (368)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCC--CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCC---HHHHHHHH-HHCC
T ss_conf 7927999999999819975998789999--8899999999974999678999850677203167---99999999-8549
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHH-CC----------
Q ss_conf 01110122110000012233222111233322574146544322-3445444221101226875310-01----------
Q gi|254780602|r 199 VHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA-MTGLRIGYAAGALSLIKSMIVL-QG---------- 266 (400)
Q Consensus 199 i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~li~~l~~~-~~---------- 266 (400)
..+|+|-+=+ +.+.+ +..+.+.--+++.+--|.++ .|| +++++.+++.++..... .+
T Consensus 162 ~lliVDaVSs---~G~~~------~~~d~wgiD~~~tgSQK~l~~pPG--Ls~v~~s~~a~~~~~~~~~~~yldl~~~~~ 230 (368)
T PRK13479 162 KRLIVDAMSS---FGAIP------IDIAELGIDALISSANKCIEGVPG--FGFVIARRSALEACKGNSRSLALDLYDQWA 230 (368)
T ss_pred CEEEEECCCC---CCCCE------ECCCCCCEEEEEECCCCCCCCCCC--CEEEEECHHHHHHHHCCCCCCCCCHHHHHH
T ss_conf 8699970200---15721------102445356999537651457997--101220899999874258876636899999
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCC
Q ss_conf ------222332222222222223467-64-3222222110000000245530477603302740899862641023321
Q gi|254780602|r 267 ------QQTSGACSIAQWAAVEALNGP-QD-FVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKS 338 (400)
Q Consensus 267 ------~~~~~~~~~~q~a~~~~l~~~-~~-~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~ 338 (400)
.....++...-.+.-++|+.- ++ -++...+++++..+.+.+.++++ |++...+++.. -+.......
T Consensus 231 ~~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGgl~~r~~r~~~~~~~~~~~~~~l-Gl~~~~~~~~~-----s~tvtav~~ 304 (368)
T PRK13479 231 YMEKTGQWRFTPPTHVVAAFYQALLQLEEEGGVPARGARYARNCRTLVAGMRAL-GFEPLLDDEIQ-----SPIIVTFHA 304 (368)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHC-----CCCEEEEEC
T ss_conf 986449988688289999999999999983188999999999999999999973-87657894565-----986799976
Q ss_pred CCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-E-CCHHHHHHHHHHHHHHHHHC
Q ss_conf 1332248989999999987397998350228997289996-2-99999999999999999860
Q gi|254780602|r 339 PSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-A-VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~-~~~e~l~~al~rl~~~l~~l 399 (400)
+. ....+..+|...| ++.|+.+.+|. ......|||+. + .+.+++...+..|++.|+++
T Consensus 305 P~-~~~~d~~~~~~~l-~~~g~~i~~G~-~~~~~~fRIGhMG~~~~~di~~~l~ale~~L~~~ 364 (368)
T PRK13479 305 PA-DPAYDFKEFYERL-KEQGFVIYPGK-LTQVDTFRIGCIGAVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CC-CCCHHHHHHHHHH-HHCCCEEECCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 78-8563599999999-97793896885-5778979887799999999999999999999985
No 192
>PRK07049 methionine gamma-lyase; Validated
Probab=99.63 E-value=1.7e-15 Score=114.51 Aligned_cols=229 Identities=17% Similarity=0.208 Sum_probs=140.7
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCC
Q ss_conf 699877-898999999998642101333322332334543333222222233223222233332322222----222222
Q gi|254780602|r 63 KYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGG 137 (400)
Q Consensus 63 ~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~ 137 (400)
+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++.+..|..-..+ +...|.
T Consensus 74 g~~YsR~~NP-T~~~lE~~iA~LEg----~~~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI 148 (427)
T PRK07049 74 GLVYSRFNHP-NSEIVEDRLAVYEG----AEAAALFSSGMSAIATTLLAFVRPGDVIVHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred CCEECCCCCH-HHHHHHHHHHHHCC----CCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCC
T ss_conf 9414289887-79999999999809----984899346999999999985189999998999827899999999997598
Q ss_pred CCCC-CCCCCCCCCCCHHHHHHCCC-----CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC--CCCCCCEEECCCCCCC
Q ss_conf 2222-22222232221033310001-----22122012113542100001233332111223--3333201110122110
Q gi|254780602|r 138 IPVF-VDTQQDDNFQVSPEKLEQAI-----TPKTKWLFLNSPSNPSGVVYSQNRLRALADVL--VRNPHVHIISDDIYEH 209 (400)
Q Consensus 138 ~~~~-v~~~~~~~~~~d~~~l~~~i-----~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~--a~~~~i~ii~De~Y~~ 209 (400)
+.+. ++. .|++.+++++ .++||+||+-+|.|||..+.+-+.+.++++-+ ++.+++.+++|..+..
T Consensus 149 ~~~~~~d~-------~d~~~~~~~i~~~~~~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~at 221 (427)
T PRK07049 149 GAVGFADG-------VSEAAIEAAAEAAAAKGRVSLIYIETPANPTNALVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred EEEEEECC-------CCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCCCC
T ss_conf 89997089-------99999999998621478706999978999877265889999999984420147876999788623
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 000012233222111233322574146544322344-5444221101226875310012223322222222222234676
Q gi|254780602|r 210 IVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQ 288 (400)
Q Consensus 210 l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~ 288 (400)
-.+ ..++ .+ + --|++.|.||.++--| .=.|.+++++++++++...+.....+++....+.++..|+.
T Consensus 222 P~~----~~Pl-~~--G---aDivvhS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~~~G~~~sP~~a~L~lrGL~T-- 289 (427)
T PRK07049 222 PVF----QKPL-EH--G---ADLSVYSLTKYVGGHSDLVAGAVLGRKALVRQVRALRGAIGTQLDPHSCWMLGRSLET-- 289 (427)
T ss_pred CCC----CCCH-HH--C---CCEEEEECCCEECCCCCCCCCEEECCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCC--
T ss_conf 213----6815-42--8---9889996361424887751351646799999999987531477890677888636886--
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 43222222110000000245530477603
Q gi|254780602|r 289 DFVVNNRKIFEYRRDLCVAQLQGVPGIRY 317 (400)
Q Consensus 289 ~~~~~~~~~~~~~r~~~~~~L~~~~g~~~ 317 (400)
+.-..++-.++...+.+.|++.|.+..
T Consensus 290 --L~lRm~r~~~nA~~vA~~L~~hp~V~~ 316 (427)
T PRK07049 290 --LVLRMERANRNARAVAEFLRDHPKVEK 316 (427)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf --999999999999999999984898327
No 193
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.63 E-value=1.1e-14 Score=109.50 Aligned_cols=336 Identities=16% Similarity=0.106 Sum_probs=188.5
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|.- .+. -+|.|.+|+++.+++- .|.+..-.-+.+..+|+.+....+.+ ....|++++++++|..
T Consensus 41 ~G~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l--~~~~~~~~~~~~~~lae~L~~~~~~~-~~~kvff~~SGsEA~E 117 (398)
T PRK03244 41 DGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATL--GHVSNLFATEPQIALAERLVALLGAP-EGARVFFCNSGAEANE 117 (398)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEEEECCHHHHHH
T ss_conf 98999996708875422389899999999999754--77756535869999999999860899-6567997186778999
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCCC-CCCCC---CCCCCCCCCCCCCC--CHHHHHHCCCCCCCCCEEECCC-CCCC
Q ss_conf 22222233223-2222333323222222-22222---22222222223222--1033310001221220121135-4210
Q gi|254780602|r 106 NALMATVNMGD-EVLIPRPYWVSYPDMV-ALCGG---IPVFVDTQQDDNFQ--VSPEKLEQAITPKTKWLFLNSP-SNPS 177 (400)
Q Consensus 106 ~~~~~~~~~Gd-~Vlv~~P~y~~y~~~~-~~~g~---~~~~v~~~~~~~~~--~d~~~l~~~i~~~~k~i~l~nP-~NPT 177 (400)
.++..--..|. .|+...-+|-.....+ ...|- +--+-|+...-.+. .|.+++++.+.+++.+|++ -| +--.
T Consensus 118 ~AlKlAr~tgr~~Iis~~~sYHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~iAAii~-EPiqg~g 196 (398)
T PRK03244 118 AAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFL-EPIQGEA 196 (398)
T ss_pred HHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCEEEEEE-ECCCCCC
T ss_conf 999999982998799983877688765423368853123467887872771578668999973898589998-5876889
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf 0001-2333321112233333201110122110000012233-2221112333225741465443223445444221101
Q gi|254780602|r 178 GVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGAL 255 (400)
Q Consensus 178 G~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 255 (400)
|.+. +++.+++|.++| +++|+++|.||+...+.=.|.-+. ....+.|+ |++ ++|..+ .|+-+|.+++.+
T Consensus 197 G~~~~~~~fl~~l~~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~~v~PD-----Iv~--~gK~lg-gG~P~sa~~~~~ 267 (398)
T PRK03244 197 GVVPPPAGYLAAAREIT-DRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPD-----VVT--LAKGLG-GGLPIGACLAFG 267 (398)
T ss_pred CCCCCCHHHHHHHHHHH-HHHCCCEECCCCCCCCCCCCCCCHHHHCCCCCC-----EEE--ECCCCC-CCCCCEEEEECH
T ss_conf 98568888999999998-573453666621248776678615653379998-----899--732024-887616889718
Q ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC--CCCEEEECCCCEEEEEECC
Q ss_conf 22687531001222332222222222223467--6432222221100000002455304--7760330274089986264
Q gi|254780602|r 256 SLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV--PGIRYMIPDGAFYLYPSCQ 331 (400)
Q Consensus 256 ~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~--~g~~~~~p~g~~y~~~~~~ 331 (400)
++.+.+..-....+.+.+.+...++.+.|+.- ++.++ ..++.-+++.+.|+++ +.+.-++.. |+++-+++.
T Consensus 268 ~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~----~v~~~g~~l~~~L~~l~~~~i~~VRG~-Gl~~giel~ 342 (398)
T PRK03244 268 PAADLLTPGLHGSTFGGNPVACAAALAVLRVIADEGLLE----NAERLGKQLRAGIEALGHPLVDHVRGR-GLLLGIVLT 342 (398)
T ss_pred HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHCCCCCEEEEEEE-EEEEEEEEC
T ss_conf 888641788767478989899999999999997557999----999999999999985489861410012-689999966
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 1023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 332 DLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
.. ...++...+ .+.|+++.+.. .+.||++ +..+++++++++++|++.|++-
T Consensus 343 ~~------------~~~~~~~~~-~~~Gll~~~~g----~n~ir~~PPl~it~~eid~~~~~l~~~L~~~ 395 (398)
T PRK03244 343 AP------------VAKAVEAAA-REAGFLVNAPA----PDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred CC------------HHHHHHHHH-HHCCCEECCCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 73------------199999999-96891993189----9979994995789999999999999999998
No 194
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.63 E-value=9.2e-15 Score=109.98 Aligned_cols=335 Identities=16% Similarity=0.185 Sum_probs=189.1
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|.- .+. -+|.|.+|+++.+++-.+ .+..-.. +..+.+|+.+.... ..+.|.+++++++|.
T Consensus 28 ~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~-~~~~~~~-~~~~~la~~L~~~~----~~d~v~f~~sGsEAv 101 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWH-VSNLYRI-PEQERLAERLVENS----FADKVFFTNSGAEAV 101 (389)
T ss_pred CCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC-CCCCCCC-HHHHHHHHHHHHCC----CCCEEEEECCHHHHH
T ss_conf 99899999360988612289978999999999865667-6565368-79999999975336----768799968748999
Q ss_pred CCCCCCC----C---CCC-CCCCCCCCCCCCCCCC-CCCCCCC---CCCCCCCCCCC--CCCHHHHHHCCCCCCCCCEEE
Q ss_conf 2222222----3---322-3222233332322222-2222222---22222222232--221033310001221220121
Q gi|254780602|r 105 FNALMAT----V---NMG-DEVLIPRPYWVSYPDM-VALCGGI---PVFVDTQQDDN--FQVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 105 ~~~~~~~----~---~~G-d~Vlv~~P~y~~y~~~-~~~~g~~---~~~v~~~~~~~--~~~d~~~l~~~i~~~~k~i~l 170 (400)
..+++.- . +++ ..|+...-+|-..... ....|.. ..+-|..+... -.+|.+.+++.+.+++-++++
T Consensus 102 e~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~l~~~~~~~iAavii 181 (389)
T PRK01278 102 ECAIKTARRYQYGKGHPERYRIITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVPFGDIEALKAAITPNTAAILI 181 (389)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCHHHHHHHHCCCCEEEEE
T ss_conf 99999999988853999972899988888867635113578844336668998882467789789999862888179999
Q ss_pred CCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 135-421000-012333321112233333201110122110000012233-22211123332257414654432234454
Q gi|254780602|r 171 NSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-| +.-.|. +.+++.++++-++| +++|+++|.||+...+.=.|.-+. ....+.|+ |+ +++|.++ .|+-
T Consensus 182 -EPi~g~gG~~~~~~~yl~~l~~lc-~~~g~llI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--~~gK~l~-gG~P 251 (389)
T PRK01278 182 -EPIQGEGGIRPLPDEFLKGLRQLC-DENGLLLIFDEVQCGVGRTGKLFAHEWAGVTPD-----IM--ALAKGIG-GGFP 251 (389)
T ss_pred -ECCCCCCCCCCCCHHHHHHHHHHH-HHHCCEEEEEEEECCCCCCCCCCHHHCCCCCCC-----EE--EECCCCC-CCCC
T ss_conf -688888896069999999999999-860653874210007775566422003676898-----67--8701246-8874
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC----CCCC-EEEECCC
Q ss_conf 4422110122687531001222332222222222223467643222222110000000245530----4776-0330274
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG----VPGI-RYMIPDG 322 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~----~~g~-~~~~p~g 322 (400)
+|.+++.+++.+.+.......+.+.+.+...++.+.|+.-++ ++..+..+++-+++.+.|++ .|.+ .-++..
T Consensus 252 ~sav~~~~ei~~~~~~g~~~~T~~gnp~~~aaala~L~~i~~--~~l~~~v~~~G~~l~~~L~~l~~~~p~~i~~vRG~- 328 (389)
T PRK01278 252 LGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVVLA--PGFLDNVQKMGLYLKQKLESLVDRFPDVIEEVRGE- 328 (389)
T ss_pred EEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE-
T ss_conf 279986388785436887677999799999999999999986--46999999999999999999987686713556450-
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 0899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+++=+++. .+..++...++ ++|+++.|+. ++.+|++ +..+++++++++++|++.++++
T Consensus 329 Gl~~gie~~-------------~~~~~i~~~~~-~~Gll~~~~g----~~~lr~~PpL~it~~ei~~~~~~l~~al~~v 389 (389)
T PRK01278 329 GLMLGLKCV-------------VPSRDLVAALR-DEGLLTVPAG----DNVVRLLPPLIITEEEIDEALERLERAAESL 389 (389)
T ss_pred EEEEEEEEC-------------CCHHHHHHHHH-HCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 369999945-------------88999999999-7993897279----9979997881398999999999999999759
No 195
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=1.8e-15 Score=114.29 Aligned_cols=165 Identities=19% Similarity=0.266 Sum_probs=109.8
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC
Q ss_conf 5699877-898999999998642101333322332334543333222222233223222233332322----22222222
Q gi|254780602|r 62 TKYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSY----PDMVALCG 136 (400)
Q Consensus 62 ~~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y----~~~~~~~g 136 (400)
.+|.-++ |.| .++++.+.+...-| .+.-++++.+..||..++.+++++||+|++++..|..- ...+...|
T Consensus 53 ~g~~YsR~gNP-T~~~lE~~la~LEg----g~~a~~~sSGmaAi~~~l~~ll~~Gd~vv~~~~~Yggt~~~~~~~l~~~G 127 (426)
T PRK05994 53 FGNIYTRITNP-TTAVLEERVAALEG----GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFG 127 (426)
T ss_pred CCCEECCCCCH-HHHHHHHHHHHHHC----CCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 79711499886-69999999999859----97289944889999999999727899899848742689999999986088
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 22222222222322210333100012212201211354210000123333211122333332011101221100000122
Q gi|254780602|r 137 GIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ 216 (400)
Q Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~ 216 (400)
.++.+++. -|+++++++++++||+||+-+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+
T Consensus 128 i~v~~~d~-------~d~~~~~~~i~~~T~lv~~EspsNP~l~v~D---i~~ia~iA-~~~g~~~vVDNT~atP~~---- 192 (426)
T PRK05994 128 WQVRWADA-------DDPASFEAAITPRTKAIFIESIANPGGTITD---IEAIAEVA-HRAGLPLIVDNTLASPYL---- 192 (426)
T ss_pred EEEEEECC-------CCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCCHHHH----
T ss_conf 69999789-------9838899736887549999878998872347---89999999-971991786356520431----
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-CCC
Q ss_conf 332221112333225741465443223445444-221
Q gi|254780602|r 217 FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG-YAA 252 (400)
Q Consensus 217 ~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v 252 (400)
..++ .+ + --|+++|.||.++--|==+| .++
T Consensus 193 ~~Pl-~~--G---aDivvhS~TKyi~GHsDvlgG~vv 223 (426)
T PRK05994 193 IRPI-EH--G---ADIVVHSLTKFLGGHGNSMGGIIV 223 (426)
T ss_pred CCHH-HH--C---CCEEEEECCCCCCCCCCEEEEEEE
T ss_conf 5867-74--8---988999645103588763788885
No 196
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.62 E-value=2.4e-15 Score=113.52 Aligned_cols=324 Identities=17% Similarity=0.205 Sum_probs=197.1
Q ss_pred CCCCHHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 988999999999998388756-9987789899999999864210133332233233454333322222223322322223
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETK-YTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP 121 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~-Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~ 121 (400)
.++|+.|++|+.+- ..+ ..+ -...+-+.+.+.++.-++.+ +.+-++++..++.++..++..+++|||+||+.
T Consensus 14 ~~v~~~V~~am~~~----~~~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 14 VPVPPRVLLAMARP----MVGHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCCHHHHHHHCCC----CCCCCCH--HHHHHHHHHHHHHHHHHCCC-CCCEEEECCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 88899999974577----7777798--89999999999999996688-87479976883799999998605899869998
Q ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 333232--22222222222222222222322210333100012--21220121135421000012333321112233333
Q gi|254780602|r 122 RPYWVS--YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNP 197 (400)
Q Consensus 122 ~P~y~~--y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~ 197 (400)
.-+... +..+++.+|++++.+...... .+|+++++++++ +..+++.+++---+||...+ +++|++++ +.|
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~wg~--~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~-k~~ 160 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVEWGE--AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAA-KEH 160 (383)
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEECCCCC--CCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC---HHHHHHHH-HHC
T ss_conf 27807779999999829966998478888--7999999999852899508999811575201376---99999999-972
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC-CCCCCCCCCCHHHHHHHHHHHCCC---------
Q ss_conf 2011101221100000122332221112333225741465443223-445444221101226875310012---------
Q gi|254780602|r 198 HVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM-TGLRIGYAAGALSLIKSMIVLQGQ--------- 267 (400)
Q Consensus 198 ~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~-~G~RiG~~v~~~~li~~l~~~~~~--------- 267 (400)
+.++|+|.+=+ +++.+. ..+-+.--+.+.+--|.++. || +|.+..+++-++.+......
T Consensus 161 g~l~iVDaVsS---~Gg~~~------~vd~wgiDv~itgSQK~l~~PPG--la~v~~S~~a~~~~~~~~~~~~ylDL~~~ 229 (383)
T COG0075 161 GALLIVDAVSS---LGGEPL------KVDEWGIDVAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKW 229 (383)
T ss_pred CCEEEEEECCC---CCCCCC------CHHHCCCCEEEECCCHHCCCCCC--CCEEEECHHHHHHHHCCCCCCEEECHHHH
T ss_conf 98899982345---788125------44442845899767201158986--14367779999998558887602219999
Q ss_pred ---------CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCC
Q ss_conf ---------22332222222222223467-64322222211000000024553047760330274089986264102332
Q gi|254780602|r 268 ---------QTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKK 337 (400)
Q Consensus 268 ---------~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~ 337 (400)
....++...-.+.-++|+.- ++-++...++++++.+.+.+.++.+ |++... +-+++.+ ......
T Consensus 230 ~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~-~~~~~s~----tvta~~ 303 (383)
T COG0075 230 LKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFA-DPERRSP----TVTAIK 303 (383)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCC-CCCCCCC----CEEEEE
T ss_conf 9988536898889877899999999999998657999999999999999999976-984236-8655788----548997
Q ss_pred CCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-E-CCHHHHHHHHHHHHHHHHHC
Q ss_conf 11332248989999999987397998350228997289996-2-99999999999999999860
Q gi|254780602|r 338 SPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-A-VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~-~~~e~l~~al~rl~~~l~~l 399 (400)
.+ . ..++.+....+++++|+.+.+|..--....+||+. + .+.+++..++..|++.|..+
T Consensus 304 ~P--~-g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 304 VP--E-GVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALREL 364 (383)
T ss_pred CC--C-CCCCHHHHHHHHHHCCEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 89--8-8772999999998479996456545576189983575678899999999999999974
No 197
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.61 E-value=3e-14 Score=106.82 Aligned_cols=360 Identities=16% Similarity=0.094 Sum_probs=204.3
Q ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCC------CCCHHH
Q ss_conf 9367889873897589999999999998699726656589749889999999999983887-569987------789899
Q gi|254780602|r 1 MVFISNILRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAV------AGISPL 73 (400)
Q Consensus 1 m~~~s~~~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~------~G~~~l 73 (400)
|++.++-++...|. ++.+.++-.+.++.+ |+|=..+. + +++.+++++-..+.+.. -|||.- .-..++
T Consensus 5 ~~~~~~~l~~~Dpe-i~~~i~~E~~RQ~~~---l~LIASEN-~-~S~~v~~a~gS~ltnkYaEGyPg~RyY~G~~~iD~i 78 (422)
T PRK13034 5 MFFFSDQLAERDDA-VRAAILAELQRQQDQ---IELIASEN-I-VSKAVLQAQGSVLTNKYAEGYPGKRYYGGCEHVDEV 78 (422)
T ss_pred HHHHCCCHHHCCHH-HHHHHHHHHHHHHCC---CEEECCCC-C-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 32202505340999-999999999999759---54860577-5-899999985662126466889986554775369999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCC--CCCCCCCCCCCC
Q ss_conf 99999986421013333223323345433332222222332232222333323222---2222222--222222222223
Q gi|254780602|r 74 REAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP---DMVALCG--GIPVFVDTQQDD 148 (400)
Q Consensus 74 R~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~---~~~~~~g--~~~~~v~~~~~~ 148 (400)
-+...++.++.||.+ --||=..+|+ +|...++.++++|||+|+..+..-..|. ......| .+.+++++++++
T Consensus 79 E~la~~rak~LF~a~--~anVqp~SGs-~AN~av~~all~PGD~im~l~l~~GGHltHG~~~~~sg~~~~~~~Y~vd~~~ 155 (422)
T PRK13034 79 EALAIERAKQLFGAD--YANVQPHSGS-QANGAVYLALLKPGDTILGMSLDAGGHLTHGAKVALSGKWFNAVQYGVDRDT 155 (422)
T ss_pred HHHHHHHHHHHHCCC--CCCCCCCCHH-HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCC
T ss_conf 999999999984999--6354778619-9999999996489986884367777625578875534560478982175323
Q ss_pred CCCCHHHHHHCCC-CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 2221033310001-22122012113542100001233-332111223333320111012211-00000122332221112
Q gi|254780602|r 149 NFQVSPEKLEQAI-TPKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVNVEP 225 (400)
Q Consensus 149 ~~~~d~~~l~~~i-~~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~~~~ 225 (400)
+ .+|.|++++.. ..|+|+|++- ++.|++. +++++.++| ++.+.+++.|-+|- .|+-.+ .+++.....
T Consensus 156 ~-~IDyd~l~~~a~~~kPklIi~G------~Say~r~id~k~~reIA-d~vGA~l~~D~AHiaGLIA~g-~~psP~~~A- 225 (422)
T PRK13034 156 G-LIDYDQVERLAVEHKPKLIIAG------FSAYPRTLDFARFRAIA-DSVGAILMVDMAHIAGLVAAG-RHPNPVPHA- 225 (422)
T ss_pred C-CCCHHHHHHHHHHCCCCEEEEC------CCCCCCCCCHHHHHHHH-HHHCCEEEECHHHHHHHHCCC-CCCCCCCCC-
T ss_conf 8-2279999999873199869966------61244212889999999-872977981156554541033-369987775-
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 33322574146544322344544422110-122687531001222332222222222-22346-7643222222110000
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGLRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAV-EALNG-PQDFVVNNRKIFEYRR 302 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~-~~l~~-~~~~~~~~~~~~~~~r 302 (400)
-++..|..|++ +|-|-|.+..+ +++.+++.+..--...+.+...+.++. .+|.+ .+.-+.+-.+...+|.
T Consensus 226 -----DvvT~TTHKTL--rGPrGGiIl~~~~el~~kId~avFPg~qggp~~h~iAa~Ava~~Ea~~~~f~~Ya~qVv~NA 298 (422)
T PRK13034 226 -----HVVTTTTHKTL--RGPRGGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALEPGFKTYIDQVIANA 298 (422)
T ss_pred -----EEEECCCCCCC--CCCCCCEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf -----28867751477--89884357526699999864333886456715778999999999966876999999999999
Q ss_pred CCHHHHHHCCCCCEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECC-CCCCC-----CCEE
Q ss_conf 00024553047760330274--0899862641023321133224898999999998739799835-02289-----9728
Q gi|254780602|r 303 DLCVAQLQGVPGIRYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQG-SSFGH-----GPSI 374 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG-~~Fg~-----~~~i 374 (400)
+.+.+.|.+. |+++.. .| +-.+++|+... ..+.. -++..|++.||.+.-- -.|.+ +..|
T Consensus 299 kaLa~~L~~~-G~~vv~-ggTdnHlvlvDl~~~----------gi~G~-~a~~~L~~~gI~~Nkn~iP~D~~~p~~~sGi 365 (422)
T PRK13034 299 QALAEVLKAR-GYDLVT-GGTDNHLLLVDLRPK----------GLTGK-QAEQALERAGITVNKNGIPFDPEKPFVTSGI 365 (422)
T ss_pred HHHHHHHHHC-CCEECC-CCCCCCEEEEECCCC----------CCCHH-HHHHHHHHCCEEECCCCCCCCCCCCCCCCCE
T ss_conf 9999999978-980457-999876366535656----------77569-9999999839586678688999899889812
Q ss_pred EEEEE------CCHHHHHHHHHHHHHHHHHC
Q ss_conf 99962------99999999999999999860
Q gi|254780602|r 375 RISYA------VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 375 Ris~~------~~~e~l~~al~rl~~~l~~l 399 (400)
||.-. -.++++++..+-|.+.|+.+
T Consensus 366 RiGt~a~TtRG~~e~em~~ia~~I~~vl~~~ 396 (422)
T PRK13034 366 RIGTPAGTTRGFGAAEFREIAGWILDVLDAL 396 (422)
T ss_pred EECCHHHHHCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 6677889838998899999999999999734
No 198
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.60 E-value=6.7e-15 Score=110.82 Aligned_cols=319 Identities=13% Similarity=0.128 Sum_probs=184.5
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98899999999999838875699877898999999998642101333322332334543333222222233223222233
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPR 122 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~ 122 (400)
.+.|+.|++|+.. .. +. -+.-..++-+.+.+.+++.++.+=+.+-++++.|++.++..++..++.+||+|++..
T Consensus 8 ~~v~~~V~~am~~----~~-~H-Rs~~F~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl~~~g~~vlv~~ 81 (355)
T TIGR03301 8 LSTSATVRDAMLV----DW-CH-WDSEFNDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI 81 (355)
T ss_pred CCCCHHHHHHHCC----CC-CC-CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 9999999997187----77-88-988999999999998999958999847999916559999999985236798799995
Q ss_pred CCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC--CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3323--22222222222222222222232221033310001221--2201211354210000123333211122333332
Q gi|254780602|r 123 PYWV--SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK--TKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH 198 (400)
Q Consensus 123 P~y~--~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~--~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~ 198 (400)
=+.. -+...++.+|..++.+...... .+|++++++.+..+ .+++.+++-.-.||...+ +++|.++| ++++
T Consensus 82 ~G~fg~r~~~~a~~~g~~~~~~~~~~g~--~~~~~~v~~~l~~~~~~~~v~~~h~ETstGv~~~---~~~i~~~~-~~~~ 155 (355)
T TIGR03301 82 NGAYGERLAKICEYLGIPHTDLNFSEYE--PPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVA-RSHG 155 (355)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEECCCCC--CCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCC---HHHHHHHH-CCCC
T ss_conf 4889999999999829966997368877--8998999999725778548999501267874175---37665665-0479
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCHHHHHHHHHHH-CC----------
Q ss_conf 0111012211000001223322211123332257414654432-23445444221101226875310-01----------
Q gi|254780602|r 199 VHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY-AMTGLRIGYAAGALSLIKSMIVL-QG---------- 266 (400)
Q Consensus 199 i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~v~~~~li~~l~~~-~~---------- 266 (400)
.++|+|-+-+ + .+.+ ++-+.++-.+.+.+--|.+ +.|| +|+++.+++.+++...- .+
T Consensus 156 ~llvVDavSs-~--g~~p------~d~~~~gvD~~~~~sQK~l~~ppG--l~~v~~~~~~~~~~~~~~~~~y~dl~~~~~ 224 (355)
T TIGR03301 156 AVLIVDAMSS-F--GAIP------IDIEELDVDALIASANKCLEGVPG--FGFVIARRDLLEASAGNARSLYLDLYDQWA 224 (355)
T ss_pred CEEEEECCCC-C--CCCC------CCCCCCCEEEEEECCCCCCCCCCC--EEEEEECHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf 6499974564-3--5686------420115658999536555678887--578886699997513798766635899998
Q ss_pred ------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC---EEEEEECCCCCC
Q ss_conf ------222332222222222223467--643222222110000000245530477603302740---899862641023
Q gi|254780602|r 267 ------QQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA---FYLYPSCQDLIG 335 (400)
Q Consensus 267 ------~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~---~y~~~~~~~~~~ 335 (400)
.+...++...-.++.++|+.- +..++...+++++..+.+++.++++ |++...+++. .-.-+.+++
T Consensus 225 ~~~~~g~~~~Tppv~~i~al~~al~~i~~eGGl~~~~~r~~~~a~~l~~~l~~l-gl~~~~~~~~~s~~vt~~~~p~--- 300 (355)
T TIGR03301 225 YMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLYPD--- 300 (355)
T ss_pred HHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHCCCCEEEEECCC---
T ss_conf 863479878788549999999999999972379999999999999999999986-9943589156498669998899---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-E-CCHHHHHHHHHHHHHHH
Q ss_conf 3211332248989999999987397998350228997289996-2-99999999999999999
Q gi|254780602|r 336 KKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-A-VSDAILEEACVRIKRFC 396 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~-~~~e~l~~al~rl~~~l 396 (400)
....+..+|...| ++.|+.+.+|..-. .+.+||+. + .+.++++..++.|++.|
T Consensus 301 ------~~~~d~~~~~~~l-~~~g~~i~~G~~~~-~~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 301 ------DPDFDFDDFYQEL-KERGFVIYPGKLTL-ADTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred ------CCCCCHHHHHHHH-HHCCEEEECCCCCC-CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf ------8885799999999-97790785787677-9989898189999999999999999769
No 199
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.58 E-value=6.1e-14 Score=104.98 Aligned_cols=333 Identities=17% Similarity=0.138 Sum_probs=183.1
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..+|+..|-- .+. -+|.|.+|+++.++...+ ....-..+.+...++.+.+.. ..+.++++++++++..
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~~~~~e~l~~l~----~~~~v~f~~sGseAvE 111 (396)
T PRK04073 38 EGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADKVTL--TSRAFHSDQLGPWYEKVAKLT----GKDMVLPMNTGAEAVE 111 (396)
T ss_pred CCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHHC----CCCEEEECCCHHHHHH
T ss_conf 8999999451788763037979999999999841787--665324347899999999752----8364896187888999
Q ss_pred CCCCCCC---------CCC-CCCCCCCCCCCCCCCCC-CCCC---CCCCCCCCCCCCCC--CCHHHHHHCCCCCCCCCEE
Q ss_conf 2222223---------322-32222333323222222-2222---22222222222322--2103331000122122012
Q gi|254780602|r 106 NALMATV---------NMG-DEVLIPRPYWVSYPDMV-ALCG---GIPVFVDTQQDDNF--QVSPEKLEQAITPKTKWLF 169 (400)
Q Consensus 106 ~~~~~~~---------~~G-d~Vlv~~P~y~~y~~~~-~~~g---~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~k~i~ 169 (400)
.++...- .+| .+|+...-+|-...... ...+ .+--+-|..+...+ ..|++.+++.+.+++-+++
T Consensus 112 ~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~AAvi 191 (396)
T PRK04073 112 TAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYGDVEALKAAITPNTAAFL 191 (396)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCCCCEEEEE
T ss_conf 99999999987623788898779997775004532052226764334577899998232575216678861489756999
Q ss_pred ECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCC-
Q ss_conf 1135-42100001-23333211122333332011101221100000122332-22111233322574146544322344-
Q gi|254780602|r 170 LNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTG- 245 (400)
Q Consensus 170 l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G- 245 (400)
+- | +...|.+. +++.++++.++| +++|+++|.||+...|.=.|.-+.. ...+.|+ |+ +++|..+ .|
T Consensus 192 ~E-Pi~g~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--~~gK~l~-gG~ 261 (396)
T PRK04073 192 VE-PIQGEAGINIPPEGFLKAARELC-KEENVLFIADEIQTGLGRTGKLFACDWDNVKPD-----MY--ILGKALG-GGV 261 (396)
T ss_pred EE-CCCCCCCCCCCCHHHHHHHHHHH-HHHCCEEECCCCEECCCCCCCCCCEECCCCCCC-----EE--ECCCCCC-CCC
T ss_conf 98-98777897789989999999999-983993526634107886576300100468988-----01--0253455-787
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC-CE
Q ss_conf 54442211012268753100122233222222222222346764322222211000000024553047760330274-08
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG-AF 324 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g-~~ 324 (400)
+-+|.+++++++.+.+..-....+.+.+.+...++.+.|+.-++ +...+..++.-+++.+.|+++..=.+....| |+
T Consensus 262 ~P~~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~~l~~~~i~~vRG~Gl 339 (396)
T PRK04073 262 FPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALDVIEE--EKLPERSLELGEYFKEQLKEIDNPMIKEVRGRGL 339 (396)
T ss_pred CCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEE
T ss_conf 76058960789996166899760548898999999999999987--5799999999999999998258997487233779
Q ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHH
Q ss_conf 99862641023321133224898999999998739799835022899728999--62999999999999999998
Q gi|254780602|r 325 YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 325 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~ 397 (400)
++=+++.+ ....++.++ .+.|+++.+. .++-||++ +..+++++++++++|++.|.
T Consensus 340 ~~giel~~-------------~~~~~~~~~-~~~Gll~~~~----~~~~ir~~PpL~it~~eid~~l~~l~~~L~ 396 (396)
T PRK04073 340 FIGVELNE-------------PARPYCEAL-KEEGLLCKET----HETVIRFAPPLVISKEELDWALEKIKAVLS 396 (396)
T ss_pred EEEEEECC-------------CHHHHHHHH-HHCCEEEEEC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99999587-------------589999999-9499799527----999899979936899999999999999859
No 200
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.58 E-value=9.6e-14 Score=103.76 Aligned_cols=343 Identities=15% Similarity=0.091 Sum_probs=196.1
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCC---CCC---HHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999998699726656589749889999999999983887-569987---789---899999999864210133
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAV---AGI---SPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~---~G~---~~lR~aia~~~~~~~g~~ 88 (400)
+..+.++-.+.++.+ |+|=..+. -+++.+++++...+.+.. -|||.- .|. .++-+...++.++.||.+
T Consensus 13 i~~~i~~E~~rq~~~---l~LIaSEN--~~S~~v~~a~gS~l~nkYaEG~pg~RyY~G~~~iD~iE~la~~ra~~lF~a~ 87 (415)
T PRK00011 13 IFEAIEKELKRQEEH---IELIASEN--FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKKLFGAE 87 (415)
T ss_pred HHHHHHHHHHHHHCC---CEEECCCC--CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999829---64853777--4799999986472227577889984245665269999999999999983898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-C
Q ss_conf 332233233454333322222223322322223333232222-----2222222222222222232221033310001-2
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD-----MVALCGGIPVFVDTQQDDNFQVSPEKLEQAI-T 162 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~-----~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i-~ 162 (400)
. -||=..+|+ .|...++.++++|||+|+..+..-..|.+ .+...+.+.++++++++++ .+|.|++++.. .
T Consensus 88 ~--anVqp~SGs-~AN~av~~all~PGD~im~l~l~~GGHltHg~~~~~~~~~~~~~~y~~d~~~~-~IDyd~~~~~a~~ 163 (415)
T PRK00011 88 Y--ANVQPHSGS-QANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETG-LIDYDEVEKLALE 163 (415)
T ss_pred C--CCCCCCCHH-HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCC-CCCHHHHHHHHHH
T ss_conf 6--056778639-99999999962789858766866678765786755446524789867864348-1679999999986
Q ss_pred CCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 2122012113542100001233-332111223333320111012211-00000122332221112333225741465443
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
.|+|+|++- ++.|++. +++++.++| ++.+.+++.|-+|- .|+-.+ .+++... .+ -++.+|.-|+
T Consensus 164 ~kPklIi~G------~S~y~r~~d~~~~reIa-d~vgA~l~~D~aHi~GLIA~g-~~~~Pl~---~A---Dvvt~tTHKT 229 (415)
T PRK00011 164 HKPKLIIAG------ASAYSRPIDFKKFREIA-DEVGAYLMVDMAHIAGLVAAG-VHPNPVP---HA---DVVTTTTHKT 229 (415)
T ss_pred HCCCEEEEC------CCCCCCCCCHHHHHHHH-HHHCCEEEEEHHHHHHHHHCC-CCCCCCC---CC---EEEECCCCCC
T ss_conf 099889964------61353312889999999-970988994535566666433-3799667---75---6885453346
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 223445444221101226875310012223322222222222-2346-76432222221100000002455304776033
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVE-ALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~-~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
| +|-|-|.+..++++.+++.+..--...+.+...+.|+.+ +|.+ .+..+.+-.+...+|.+.+.+.|.+. |+++.
T Consensus 230 l--rGPrGGiIl~~~e~~~kId~aVFPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~-G~~vv 306 (415)
T PRK00011 230 L--RGPRGGLILTNEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALQER-GFKVV 306 (415)
T ss_pred C--CCCCCEEEEECCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_conf 7--89886079734066666541207531468047789999999999847418999999999999999999768-97797
Q ss_pred ECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCC---CCCCCCEEEEEEE------CCHH
Q ss_conf 0274--08998626410233211332248989999999987397998----350---2289972899962------9999
Q gi|254780602|r 319 IPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV----QGS---SFGHGPSIRISYA------VSDA 383 (400)
Q Consensus 319 ~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~----pG~---~Fg~~~~iRis~~------~~~e 383 (400)
. .| +-.+++|+... ..+.. -+++.|++.||.+. |+. .|. +..|||.-. -.++
T Consensus 307 ~-ggTdnHlvlvdl~~~----------g~~G~-~a~~~Le~~gI~vNkn~iP~d~~~~~~-~SGiRiGt~a~TtrG~~e~ 373 (415)
T PRK00011 307 S-GGTDNHLVLVDLRKK----------GLTGK-DAEAALEEANITVNKNAIPFDPRSPFV-TSGIRIGTPAITTRGFKEA 373 (415)
T ss_pred E-CCCCCCEEEEECCCC----------CCCHH-HHHHHHHHCCEEECCCCCCCCCCCCCC-CCCEEECCHHHHHCCCCHH
T ss_conf 1-798774477645645----------68899-999999985908755879899999888-8601436788974899889
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999998
Q gi|254780602|r 384 ILEEACVRIKRFCH 397 (400)
Q Consensus 384 ~l~~al~rl~~~l~ 397 (400)
++++..+-|.+.+.
T Consensus 374 em~~ia~~I~~~l~ 387 (415)
T PRK00011 374 EMEEIAELIADVLD 387 (415)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999983
No 201
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=1.2e-14 Score=109.30 Aligned_cols=231 Identities=15% Similarity=0.207 Sum_probs=138.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222222----22222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA----LCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~----~~g~~ 138 (400)
-|+- .|.| .++++.+.+...-| .+.-++++.+..||..++ .++.+||+|+++.+.|..-...+. ..|..
T Consensus 47 ~Y~R-~~nP-T~~~le~~la~LE~----~~~a~~~sSGmaAi~~~l-~~l~~Gd~vv~~~~~Yg~t~~~~~~~~~~~~~~ 119 (364)
T PRK07269 47 DYTR-TKNP-TRATLEETLAAIES----ADYALATSSGMSAIVLAF-SGFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFH 119 (364)
T ss_pred CCCC-CCCH-HHHHHHHHHHHHHC----CCCEEECCCHHHHHHHHH-HHHCCCCEEEECCCEECHHHHHHHHHHHCCEEE
T ss_conf 3518-9886-38999999999849----974453276899999999-983689808970460737999999887438389
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
Q ss_conf 22222222232221033310001221220121135421000012333321112233333201110122110000012233
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS 218 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~ 218 (400)
..+ .-+.++++++++++||+||+=+|.|||-.+.+ +++|+++| +++++.+++|..+.--.+ +.
T Consensus 120 ~~~---------~~~~~~~~~~i~~~Tklv~~EspsNP~l~v~D---i~~i~~iA-~~~g~~~vvDNT~atP~~----~~ 182 (364)
T PRK07269 120 FTY---------ANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAQLA-HAKGAKVIVDNTFYSPIY----QR 182 (364)
T ss_pred EEE---------CCCHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-HHCCCEEEEECCCCCCCC----CC
T ss_conf 996---------89859999744878539999889997776247---79999988-756985999788643202----67
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222111233322574146544322344-54442211-0122687531001222332222222222223467643222222
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRK 296 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 296 (400)
++ .+ + --|++.|.||.++--| .=.|.+++ ++++.+++...+.....++++...+.+...|+. +.-..+
T Consensus 183 Pl-~~--G---aDivihS~TKYl~GHsDvl~G~vv~~~~~~~~~l~~~~~~~G~~~sP~~a~l~~RGL~T----L~lR~~ 252 (364)
T PRK07269 183 PL-ED--G---ADIVLHSATKYLSGHNDVLAGVVVTNDLELYDKLFYNLNTTGAVLSPFDSYLLMRGLKT----LSLRME 252 (364)
T ss_pred CC-CC--C---CCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC----HHHHHH
T ss_conf 32-35--8---61899835500148887401689459889999999999854887894777888637773----999999
Q ss_pred CCCCCCCCHHHHHHCCCCCE-EEECC-CCEEEE
Q ss_conf 11000000024553047760-33027-408998
Q gi|254780602|r 297 IFEYRRDLCVAQLQGVPGIR-YMIPD-GAFYLY 327 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~~~g~~-~~~p~-g~~y~~ 327 (400)
+-.++...+.+.|++.|.++ +.-|- ||++-|
T Consensus 253 ~~~~nA~~lA~~L~~hp~V~~V~yPGlgg~~sf 285 (364)
T PRK07269 253 RSTANAQEVVAFLKKSPAVKEVLYTGKGGMISF 285 (364)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEE
T ss_conf 999999999999975998349977997726799
No 202
>PRK07480 putative aminotransferase; Validated
Probab=99.57 E-value=1.1e-13 Score=103.40 Aligned_cols=345 Identities=13% Similarity=0.089 Sum_probs=176.3
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-89999999999983887569987-7898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAV-AGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~-~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..|. .++. -+|.|.+|+++.+++-. .|... ...-+.+..+|+.+..... -.-++|++++++++|+
T Consensus 51 dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~-~~~~~~~~~~~~~~~lAe~L~~~~p--~~l~~v~f~~SGsEA~ 127 (459)
T PRK07480 51 EGNKILDGMAGLWCVNVGYGRKELADAAYRQMRELP-YYNTFFKTTHPPVIELAAKLAEVAP--AGFNHVFFTNSGSEAN 127 (459)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHH
T ss_conf 999999876248745168899999999999997557-7025545578899999999998488--8758799708758999
Q ss_pred CCCCCCCC-------CCCC-CCCCCCCCCCCCCC-CCCCCC--------------CCCCCCCCCCCCCCCCH--------
Q ss_conf 22222223-------3223-22223333232222-222222--------------22222222222322210--------
Q gi|254780602|r 105 FNALMATV-------NMGD-EVLIPRPYWVSYPD-MVALCG--------------GIPVFVDTQQDDNFQVS-------- 153 (400)
Q Consensus 105 ~~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~-~~~~~g--------------~~~~~v~~~~~~~~~~d-------- 153 (400)
..++...- .++. .|+...-+|-.... .....| ...+..|......+..+
T Consensus 128 E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~v~~P~~~~~~~~~~~~~~~~~~ 207 (459)
T PRK07480 128 DTVLRMVRHYWALKGKPQKKVVISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAA 207 (459)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999970999870899945864664066666338843234568888885664798743346789867878999
Q ss_pred HHHHHCCCC----CCCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 333100012----21220121135-421000-0123333211122333332011101221100000122332-2211123
Q gi|254780602|r 154 PEKLEQAIT----PKTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~----~~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~ 226 (400)
.+++++.+. +++-+|+ .-| +.-.|. +.+++-+++|.++| +++|+++|.||++..+.=.|.-+.. -..+.|+
T Consensus 208 ~~~le~~i~e~~~~~iAavi-~EPi~g~gG~~~~p~~yl~~lr~lc-~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PD 285 (459)
T PRK07480 208 ARQLEAKILELGAENVAAFI-GEPIQGAGGVIIPPSTYWPEIQRIC-RKYDILLVADEVICGFGRTGEWFGHQHFGFEPD 285 (459)
T ss_pred HHHHHHHHHHHCCCCEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999850887657876-2552466884228889999999988-643977999735328875545423567798886
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH----CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf 3322574146544322344-5444221101226875310----01222332222222222223467--643222222110
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVL----QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFE 299 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~ 299 (400)
|++ ++|.++ .| +-+|.+++.+++.+.+..- ....+.+.+.+...++++.|+.- +..+++.++..
T Consensus 286 -----ii~--~gKglg-gG~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~Gnplacaaala~L~~i~~~~l~~~~~~~~- 356 (459)
T PRK07480 286 -----LMT--IAKGLT-SGYIPMGAVIVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRTDT- 356 (459)
T ss_pred -----EEE--ECCCCC-CCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH-
T ss_conf -----898--752002-89877369987389998761178754247789999799999999999986162999999999-
Q ss_pred CCCCCHHHH---HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHH---HHHHHHHHCCEEEECCCCCCCCCE
Q ss_conf 000000245---53047760330274089986264102332113322489899---999999873979983502289972
Q gi|254780602|r 300 YRRDLCVAQ---LQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLD---FVNGLLEIEKVAVVQGSSFGHGPS 373 (400)
Q Consensus 300 ~~r~~~~~~---L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~---~~~~Ll~~~gV~v~pG~~Fg~~~~ 373 (400)
.+++.+. |++.+.+.-++..|-|+. +++..-.... .......+ .+...+-+.|+++.+. .+.
T Consensus 357 --g~~l~~~l~~L~~~p~i~~vRG~Glm~g-iel~~~~~~~----~~~~~~~~~~~~~~~~~~~~Gll~~~~-----gn~ 424 (459)
T PRK07480 357 --GPYLQKRLRELADHPLVGEVRGVGLVGA-LELVKDKATR----ERFAAGGGVGTICRDHCFNNGLIMRAV-----GDR 424 (459)
T ss_pred --HHHHHHHHHHHHCCCCEEEEEECCEEEE-EEEECCCCCC----CCCCCHHHHHHHHHHHHHHCCEEEEEC-----CCE
T ss_conf --9999999998515996877230552899-9974374434----456633689999999999799499616-----998
Q ss_pred EEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8999--6299999999999999999860
Q gi|254780602|r 374 IRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 374 iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+|++ +..+++++++++++|++.|+..
T Consensus 425 l~l~PPL~it~~eid~~l~~l~~aL~~~ 452 (459)
T PRK07480 425 MILSPPLVISRAEIDELVEKARKALDLT 452 (459)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9997882388999999999999999999
No 203
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.57 E-value=1.1e-13 Score=103.35 Aligned_cols=338 Identities=14% Similarity=0.074 Sum_probs=184.5
Q ss_pred CCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658--97498-89999999999983887569987789-8999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..| ...+. -+|.|.+|+++.+++-. |....+. .+.+..+|+.+.+...- .-+.|.+++++++|.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~--~~~~~~~~~~~~~~lA~~L~~~~p~--~~~~v~f~~SGsEA~ 115 (421)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPHIDAAIREQLDRLD--HVMFAGFTHEPAERLAKRLVALTPG--GLDHVFFSDSGSVAV 115 (421)
T ss_pred CCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHH
T ss_conf 999999936068740268998999999999997578--7546875758999999999984787--758799947813699
Q ss_pred CCCCCCC-------CCCCCCCCCCCCCCCCCCCCCCCCC--------CC-----CCCCCCCCCCCCCCHHHHHHCCCCC-
Q ss_conf 2222222-------3322322223333232222222222--------22-----2222222223222103331000122-
Q gi|254780602|r 105 FNALMAT-------VNMGDEVLIPRPYWVSYPDMVALCG--------GI-----PVFVDTQQDDNFQVSPEKLEQAITP- 163 (400)
Q Consensus 105 ~~~~~~~-------~~~Gd~Vlv~~P~y~~y~~~~~~~g--------~~-----~~~v~~~~~~~~~~d~~~l~~~i~~- 163 (400)
..+++.. ..+...|+...-+|-.-...+...+ .. ....+.. ++....+.+.+++.+..
T Consensus 116 e~AiKlA~~y~~~~g~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~le~~~~~~ 194 (421)
T PRK05964 116 EVALKMALQYWRNRGEPRSRFLSLRGGYHGDTLGTMSVGMHGLFNATYGPLLFQVLALPVP-RDYEQAYLDALEALLEKH 194 (421)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCC-CCCCHHHHHHHHHHHHHC
T ss_conf 9999999999986399751899973886898513432357533457888888887655899-863388999999999747
Q ss_pred --CCCCEEECCC--CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCC
Q ss_conf --1220121135--421000-012333321112233333201110122110000012233-2221112333225741465
Q gi|254780602|r 164 --KTKWLFLNSP--SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 164 --~~k~i~l~nP--~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~ 237 (400)
++-++++ -| ++-.|. +.+++-++++.++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+ ++
T Consensus 195 ~~~iAAvi~-EP~iqg~GG~~~~p~~y~~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--t~ 265 (421)
T PRK05964 195 AGEIAAVIV-EPLVQGAGGMLFYDPRYLAELRRIC-DRHGVLLIFDEIATGFGRTGTLFACEQAGVSPD-----IM--CL 265 (421)
T ss_pred CCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC-----EE--EE
T ss_conf 997789999-7884678997678889999998871-006804651211026875678875430025898-----78--87
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 4432234454442211012268753100------1222332222222222223467--6432222221100000002455
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQ------GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L 309 (400)
+|..+-.++-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.+++. +++-+++.+.|
T Consensus 266 gKgl~gG~~Pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~----~~~g~~l~~~L 341 (421)
T PRK05964 266 SKGLTGGYLPLAATLCTAEIFDAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERV----AALSAGLTEGL 341 (421)
T ss_pred CCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH----HHHHHHHHHHH
T ss_conf 22035787624899985899976316787764003788888969999999999999645199999----99999999999
Q ss_pred ---HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHH
Q ss_conf ---30477603302740899862641023321133224898999999998739799835022899728999--6299999
Q gi|254780602|r 310 ---QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAI 384 (400)
Q Consensus 310 ---~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~ 384 (400)
++.+.+.-++.. |+++-+++.... .......+...+ .+.|+++.|. .+.+|++ +..++++
T Consensus 342 ~~l~~~~~I~dvRG~-GL~~~ie~~~~~--------~~~~~~~i~~~~-~~~Glli~~~-----gn~ir~~PpL~it~~e 406 (421)
T PRK05964 342 EPFRDLPRVADVRVL-GAIGAVELDRPD--------DGRIGPALTAAF-LDRGVLLRPL-----GNTIYLMPPYIITPEE 406 (421)
T ss_pred HHHCCCCCEEEEEEC-CEEEEEEEECCC--------CHHHHHHHHHHH-HHCCCEEEEC-----CCEEEEECCCCCCHHH
T ss_conf 974359976764104-629999972578--------679999999999-9789099966-----9999997893689999
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 999999999999860
Q gi|254780602|r 385 LEEACVRIKRFCHSL 399 (400)
Q Consensus 385 l~~al~rl~~~l~~l 399 (400)
+++++++|++.++.+
T Consensus 407 id~~~~~l~~al~ev 421 (421)
T PRK05964 407 LARITDAIVEVADEL 421 (421)
T ss_pred HHHHHHHHHHHHHHC
T ss_conf 999999999999629
No 204
>PRK06917 hypothetical protein; Provisional
Probab=99.57 E-value=6.9e-14 Score=104.65 Aligned_cols=353 Identities=12% Similarity=0.120 Sum_probs=183.4
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|.- .+. -+|.|.+|+++.++...+.|.. .-..+.++.+|+.+.+... -+-+.+.+++++++|.
T Consensus 28 ~dG~~ylD~~sg~~~~~lGh~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~la~~l~~~~p--~~~~~~~f~~SGsEAv 104 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIGHGVKEIADVIKEQAEEVSFVYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSEAN 104 (447)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHH
T ss_conf 997999983235898982899799999999998538873666-4245899999999998578--8878799628789999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCCC--------------CCCCCC------CCCCCC-CC-CH
Q ss_conf 2222222-------3322-3222233332322222-222222--------------222222------222232-22-10
Q gi|254780602|r 105 FNALMAT-------VNMG-DEVLIPRPYWVSYPDM-VALCGG--------------IPVFVD------TQQDDN-FQ-VS 153 (400)
Q Consensus 105 ~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~-~~~~g~--------------~~~~v~------~~~~~~-~~-~d 153 (400)
..++..- ..+| ..|+...-+|-.-... ....|. ..+..| ...... .. -.
T Consensus 105 E~AiKlA~~y~~~r~~t~r~~Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~~~~~~~~~~ 184 (447)
T PRK06917 105 ETAMKIAIQHWQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRCPVQKVYPTCQLAC 184 (447)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999983899984899950551466660366238821147878878897744898655777776540358999
Q ss_pred HHHHHCCCC---CC-CCCEEECCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 333100012---21-220121135--4210000123-33321112233333201110122110000012233-2221112
Q gi|254780602|r 154 PEKLEQAIT---PK-TKWLFLNSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEP 225 (400)
Q Consensus 154 ~~~l~~~i~---~~-~k~i~l~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~ 225 (400)
.+++++.+. ++ +-+++ .-| .+--|.+.+. +-+++|.++| +++++++|.||+...+.=.|.-+. ....+.|
T Consensus 185 ~~~le~~i~~~~~~~iAAvi-~EPi~g~~Gg~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~P 262 (447)
T PRK06917 185 ATELERSIERIGAEHIAAFI-AEPIIGAAGGAVVPPKGYYKVIKDIC-SHYDILFIADEVMTGLGRTGAWFAMEHWGVEP 262 (447)
T ss_pred HHHHHHHHHHHCCCCEEEEE-ECCCEECCCCCEECCHHHHHHHHHHH-HHCCCEEEEEECEECCCCCCCCCHHHHCCCCC
T ss_conf 99999999973887746999-71303057971646878999999996-52695289741100787568743153359897
Q ss_pred CCCCEEEEECCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC
Q ss_conf 333225741465443223445-44422110122687531001----222332222222222223467--64322222211
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGL-RIGYAAGALSLIKSMIVLQG----QQTSGACSIAQWAAVEALNGP--QDFVVNNRKIF 298 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~~~li~~l~~~~~----~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~ 298 (400)
+ |+ +++|.++ .|+ -+|.+++.+++.+.+..-.. ..+.+.+.+...++.+.|+-- ++.++ ..
T Consensus 263 D-----ii--~~gK~l~-gG~~Pl~av~~~~~i~~~~~~g~~~~~~g~Tf~gnpla~aaa~a~L~~l~~~~l~~----~~ 330 (447)
T PRK06917 263 D-----IM--TLGKGLG-AGYTPMAATVVSDRVMEPILRGSRSVMSGHTLSANPLSAATALAVIEYMEKHNLPE----KT 330 (447)
T ss_pred C-----EE--EECHHHC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HH
T ss_conf 7-----89--7740111-89877389988189886540588762017789899999999999999998645999----99
Q ss_pred CCCCCCHHHHHHCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--C-CC
Q ss_conf 00000002455304----77603302740899862641023321133224898999999998739799835022--8-99
Q gi|254780602|r 299 EYRRDLCVAQLQGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--G-HG 371 (400)
Q Consensus 299 ~~~r~~~~~~L~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--g-~~ 371 (400)
+++-+++.+.|+++ +-+.-++..| +++=+++..-.....+......-...++.. +.+.|+++.|.... | ..
T Consensus 331 ~~~G~~l~~~L~~l~~~~~~i~dVRG~G-Lm~giel~~d~~~~~~~~~~~~~a~~i~~~-~~~~Gll~~~~~~~~~g~~~ 408 (447)
T PRK06917 331 AEKGEYLIKGLQEVQQQSTIIGDVRGKG-LLIGVEFVADQKTKKPFPQPFSKASELISV-AAKNGLLLYPAVSGQAGKEG 408 (447)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECC-EEEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHCCCEEEECCCCCCCCCC
T ss_conf 9999999999999986399778765156-169999842665567787248999999999-99789889874456778999
Q ss_pred CEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 728999--6299999999999999999860
Q gi|254780602|r 372 PSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 372 ~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+.+|++ +..+++++++++++|.+.++++
T Consensus 409 ~~lrl~PPL~it~~eid~~i~~l~~al~ev 438 (447)
T PRK06917 409 SALLIAPPMTTTYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 989997992278999999999999999999
No 205
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.57 E-value=4.7e-14 Score=105.65 Aligned_cols=345 Identities=13% Similarity=0.085 Sum_probs=199.3
Q ss_pred HHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 99999999999869972665658974988999999999998388756998778989999999986421013333223323
Q gi|254780602|r 17 LVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIV 96 (400)
Q Consensus 17 ~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~i 96 (400)
-++.+..++......+ .+...|..-.++.|...+++...+......+...++..++-+.+.+|+.+.+|.+ ++. =.+
T Consensus 9 ~~v~~~l~~~~~~d~~-~~~~~~~~~~~~~~~a~~a~~~~~~~N~~~~~~~P~~~~mE~~vv~~~a~l~g~p-~~~-G~~ 85 (375)
T PRK13520 9 EEILSELEEYRSEDLK-YERILSSMCTKPHPIAREAHEMFLETNLGDPGLFPGTAKLEREVVRMLGELLHLP-DAY-GYI 85 (375)
T ss_pred HHHHHHHHHHHCCCCC-HHHEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCC-CCE-EEE
T ss_conf 9999999998714899-7573477647834999999999996178985338779999999999999980999-880-899
Q ss_pred CCCCCCCCCCCCCCCCCC--C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECC
Q ss_conf 345433332222222332--2--322223333232222222222222222222223222103331000122122012113
Q gi|254780602|r 97 GTGAKHVIFNALMATVNM--G--DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNS 172 (400)
Q Consensus 97 t~G~~~~l~~~~~~~~~~--G--d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~n 172 (400)
|+|+++++.+++.+.=+. + .+|+++.-.-..+...+.++|.+++.+|++++ +.+|+++++++++++|-+|+-+-
T Consensus 86 tsGGTes~l~Al~aaR~~~~~~~p~iv~~~~aH~s~~Kaa~~~gi~~~~vp~d~~--~~~d~~~l~~~i~~~ti~vvata 163 (375)
T PRK13520 86 TSGGTEANIQAVRAARNLADAEKPNIVVPESAHFSFDKAADMLGLELRRAPLDED--YRVDVKSVEDLIDDNTIGIVGIA 163 (375)
T ss_pred ECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEECCC--CCCCHHHHHHHHHHCCEEEEEEC
T ss_conf 5618999999999997626899987999673169999999974955699403888--86989999998864957999925
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 5421000012333321112233333201110122110000--01223322211123332257414654432234454442
Q gi|254780602|r 173 PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVY--RNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGY 250 (400)
Q Consensus 173 P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~--~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 250 (400)
|+-|||.+= .+++|.++| +++++|+-+|.+|+.++. -... .++..-.++. ..|.+ ++.|.. ..-.-+|+
T Consensus 164 gtt~~G~iD---pi~~i~~i~-~~~~i~lHVDaa~GGf~~pf~~~~-~~~df~l~~v--dSIs~-d~HK~g-~~p~g~g~ 234 (375)
T PRK13520 164 GTTELGQVD---PIPELSKIA-LENDIFLHVDAAFGGFVIPFLDDP-YDFDFSLPGV--SSITI-DPHKMG-LAPIPAGG 234 (375)
T ss_pred CCCCCEEEC---CHHHHHHHH-HHCCCEEEEECCCCEEEEECCCCC-CCCCCCCCCE--EEEEE-CCCCCC-CCCCCEEE
T ss_conf 887882235---999999999-975974998625520221125766-4000477880--26424-611136-51577159
Q ss_pred CCC-HHHHHHHHHHHCCCCCCC------CCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-
Q ss_conf 211-012268753100122233------222-----2222222223467643222222110000000245530477603-
Q gi|254780602|r 251 AAG-ALSLIKSMIVLQGQQTSG------ACS-----IAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY- 317 (400)
Q Consensus 251 ~v~-~~~li~~l~~~~~~~~~~------~~~-----~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~- 317 (400)
++. ++++.+.+..-..+.... -+. ..+++....+ +.+-+.+..+...+..+++.+.|+++ |+..
T Consensus 235 vl~r~~~~~~~~~~~~~Yl~~~~~~tl~gSR~g~~~~~~Wa~l~~~--G~~Gy~~~~~~~~~~a~~la~~l~~~-g~e~~ 311 (375)
T PRK13520 235 ILFRDPEFLDALDVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYL--GREGYRKVVERCMENTRYLVEELEKL-GFEPV 311 (375)
T ss_pred EEECCHHHHHHHCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE
T ss_conf 9987889998724677143589873560588775599999999997--39999999999999999999999867-99897
Q ss_pred EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHH
Q ss_conf 30274089986264102332113322489899999999873979983502289972899962--9999999999999999
Q gi|254780602|r 318 MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA--VSDAILEEACVRIKRF 395 (400)
Q Consensus 318 ~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~--~~~e~l~~al~rl~~~ 395 (400)
..|+-...+| +. .+..++.+.| ++.|=.+ +... .+..+||++. .+.+.+++-++-|++.
T Consensus 312 ~~P~~~iV~F-r~--------------~~~~~l~d~l-~~~GW~v-~~~~--~P~~lhivv~~~~~~~~id~fl~DL~e~ 372 (375)
T PRK13520 312 IEPVLNIVAF-DD--------------PNPHEVRKKL-RERGWRV-SVTR--CPEALRIVVMPHVTREHIEAFLEDLDEV 372 (375)
T ss_pred CCCCCEEEEE-EC--------------CCHHHHHHHH-HHCCCEE-CCCC--CCCEEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 0898139999-57--------------9999999999-9769874-5788--9984899995999989999999999999
Q ss_pred HH
Q ss_conf 98
Q gi|254780602|r 396 CH 397 (400)
Q Consensus 396 l~ 397 (400)
.+
T Consensus 373 ~~ 374 (375)
T PRK13520 373 KK 374 (375)
T ss_pred HH
T ss_conf 52
No 206
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.57 E-value=1.7e-14 Score=108.42 Aligned_cols=344 Identities=12% Similarity=0.142 Sum_probs=182.9
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..||+..|. ..+. -+|.|.+|+.+.++.+.. |..+ .++...+|+.+.+... ..+.|.+++++++|..
T Consensus 51 dG~~yiD~~~g~g~~~lGh~~p~v~~Ai~~q~~~g~~-~~~~---~~~~~~lAe~l~~~~p---~~~~v~F~~sGsEA~e 123 (429)
T PRK12389 51 DGNKYIDYLAAYGPIITGHAHPHITKAIQTAAENGVL-YGTP---TELEIEFAKMLKEAIP---SLEKVRFVNSGTEAVM 123 (429)
T ss_pred CCCEEEECCHHHHHHCCCCCCHHHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHCC---CCCEEEEECCCHHHHH
T ss_conf 9899988322166540038989999999999823885-7799---8999999999998578---8766986268428999
Q ss_pred CCCCCCC-CCC-CCCCCCCCCCCCCCCCCC-CCCCCC--C------CCCCCC-CCCCC---CHHHHHHCCCC---CCCCC
Q ss_conf 2222223-322-322223333232222222-222222--2------222222-23222---10333100012---21220
Q gi|254780602|r 106 NALMATV-NMG-DEVLIPRPYWVSYPDMVA-LCGGIP--V------FVDTQQ-DDNFQ---VSPEKLEQAIT---PKTKW 167 (400)
Q Consensus 106 ~~~~~~~-~~G-d~Vlv~~P~y~~y~~~~~-~~g~~~--~------~v~~~~-~~~~~---~d~~~l~~~i~---~~~k~ 167 (400)
.+++.-- ..| ++|+...-+|-.+...+. ..|..+ . .+|... +.-+. -|++.+++.+. ++.-+
T Consensus 124 ~AiklAR~~tgr~kii~~~~~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~nd~~~l~~~l~~~~~~iAa 203 (429)
T PRK12389 124 TTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPFNDIESYKEALDKWGDEVAA 203 (429)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEE
T ss_conf 99999998349996541145759985432231368853468987678876555652530789999999999845896689
Q ss_pred EEECCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 121135-421000012-333321112233333201110122110000012233222111233322574146544322344
Q gi|254780602|r 168 LFLNSP-SNPSGVVYS-QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 168 i~l~nP-~NPTG~v~s-~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
|++ -| .--.|.+.+ ++-+++|-++| +++++++|.||+...|.....-......+.|+ +-+++|..+ .|
T Consensus 204 vI~-EPi~g~~G~i~p~~~yl~~lr~lc-~~~giLLI~DEV~TGfR~g~~~a~~~~gV~PD-------i~t~gK~lg-gG 273 (429)
T PRK12389 204 VLV-EPIVGNFGIVEPKPGFLEEVNELA-HEAGALVIYDEVITAFRFMYGGAQDLLGVIPD-------LTALGKIIG-GG 273 (429)
T ss_pred EEE-ECCCCCCCEECCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCCHHHCCCCCCC-------HHHEHHHCC-CC
T ss_conf 996-022367880169989999999999-97198899965510315666707655389997-------100103227-98
Q ss_pred CCCCCCCCHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC---CCCEEEE
Q ss_conf 5444221101226875310---012223322222222222234676432222221100000002455304---7760330
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVL---QGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV---PGIRYMI 319 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~---~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~~~~ 319 (400)
+-+|.+++.+++++.+... ....+.+.+.+...|+++.|+.-++ +...+..++.-+++.+.|+++ .++....
T Consensus 274 ~Pi~av~g~~eim~~~~~~g~~~~~gTf~gnpla~AAalA~L~~l~~--~~l~~~~~~~G~~l~~gl~~l~~~~~~~~~v 351 (429)
T PRK12389 274 LPIGAYGGRQDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQ--EGVYEKLDELGAMLEEGILKLAEKHNITITI 351 (429)
T ss_pred CCEEEEEEHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 64488767799998731579850258888688999999999999971--6899999999999999999999877998799
Q ss_pred -CCCCEE-EEEECCCCCCCCCCCCCCCCCH---HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf -274089-9862641023321133224898---99999999873979983502289972899962999999999999999
Q gi|254780602|r 320 -PDGAFY-LYPSCQDLIGKKSPSGDVIRTD---LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 320 -p~g~~y-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
--|+++ ++............ ...+. ..|+..+ .+.||.+.|+. ... ..+|++.++++++++++.+++
T Consensus 352 ~~~g~~~~i~f~~~~v~~~~~~---~~~~~~~~~~~~~~m-l~~Gv~~~p~~---~~~-~~ls~~hTe~dId~~l~a~d~ 423 (429)
T PRK12389 352 NRLKGALTVYFTDEKVTDYDQA---ERSDGEAFGKFFKLM-LNQGINLAPSK---YEA-WFLTTEHTEEDIEETIKAVDR 423 (429)
T ss_pred EECCCEEEEEECCCCCCCHHHH---HHCCHHHHHHHHHHH-HHCCCCCCCCC---CCC-CCCCCCCCHHHHHHHHHHHHH
T ss_conf 4148568999458988898998---615799999999999-97886456867---777-416467899999999999999
Q ss_pred HHHHC
Q ss_conf 99860
Q gi|254780602|r 395 FCHSL 399 (400)
Q Consensus 395 ~l~~l 399 (400)
.++.|
T Consensus 424 al~~l 428 (429)
T PRK12389 424 AFAQM 428 (429)
T ss_pred HHHHH
T ss_conf 99975
No 207
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.56 E-value=4.4e-14 Score=105.86 Aligned_cols=333 Identities=15% Similarity=0.138 Sum_probs=183.7
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..||+..|.- .+. -+|.|.+|+++.++... |....-..+.+..+++.+.+..+ .+.+++++++++|..
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~l~~~l~~~~~----~~~v~f~~SGsEAve 115 (404)
T PRK00854 42 DGRRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLT--LTSRAFRNDQLAPLYEELAALTG----SHKVLPMNSGAEAVE 115 (404)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHCCC----CCEEEECCCHHHHHH
T ss_conf 999998826299977542797999999999985678--65554265799999999974037----684885587799999
Q ss_pred CCCCCCC---------CCC-CCCCCCCCCCCCCCCCC-CCCC---CCCCCCCCCCCCCC--CCHHHHHHCCCCCCCCCEE
Q ss_conf 2222223---------322-32222333323222222-2222---22222222222322--2103331000122122012
Q gi|254780602|r 106 NALMATV---------NMG-DEVLIPRPYWVSYPDMV-ALCG---GIPVFVDTQQDDNF--QVSPEKLEQAITPKTKWLF 169 (400)
Q Consensus 106 ~~~~~~~---------~~G-d~Vlv~~P~y~~y~~~~-~~~g---~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~k~i~ 169 (400)
.+++..- ..| .+|+...-+|......+ ...+ .+..+-|..+.-.. ..|.+++++.+.+++-+++
T Consensus 116 ~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~~~~~~aAvi 195 (404)
T PRK00854 116 TAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPFGDAAALEAAITPNTVAFL 195 (404)
T ss_pred HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCCEEEEE
T ss_conf 99999999876503787898559996456678601354346774335688899998155056668999986398748999
Q ss_pred ECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 1135-4210000-12333321112233333201110122110000012233-2221112333225741465443223445
Q gi|254780602|r 170 LNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 170 l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
+ -| +-..|.+ .+++.+++|-++| +++|+++|.||+...+.=.|.-+. ....+.|+ |+ +++|..+ .|+
T Consensus 196 i-EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD-----ii--~~gKgl~-gG~ 265 (404)
T PRK00854 196 I-EPIQGEAGVIIPPAGYFRRVRELC-TANNVTLILDEIQTGLGRTGKLLAEEHEGIEAD-----VT--LIGKALS-GGF 265 (404)
T ss_pred E-ECCCCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC-----EE--EECCCCC-CCC
T ss_conf 9-177577896179989999999999-970764457500017863557414554248979-----89--7564445-887
Q ss_pred -CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCC--CCEEEECC
Q ss_conf -44422110122687531001222332222222222223467--64322222211000000024553047--76033027
Q gi|254780602|r 247 -RIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVP--GIRYMIPD 321 (400)
Q Consensus 247 -RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~--g~~~~~p~ 321 (400)
-+|.+++.+++++.+.......+.+.+.+...++.+.|+.- ++.++ ..++.-+++.+.|+++. .+.-++..
T Consensus 266 ~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaa~a~l~~i~~e~l~~----~~~~~g~~l~~~L~~l~~~~i~~VRG~ 341 (404)
T PRK00854 266 YPVSAVLSNSEVLGVLRPGQHGSTFGGNPLACAVARAALRVLVEEGMIE----NAAEQGAYFLEGLRAIRGNIVREVRGR 341 (404)
T ss_pred CCCCEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHCCCCCEEEEEEC
T ss_conf 6532020479999506798877888989899999999999998658999----999999999999985048972766444
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHH
Q ss_conf 40899862641023321133224898999999998739799835022899728999--62999999999999999998
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~ 397 (400)
| +++=+++... ......++..+ .+.|+++.+. .++.||+. +..+++++++++++|++.|.
T Consensus 342 G-lm~gve~~~~----------~~~~~~~~~~~-~~~Gll~~~~----~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 342 G-LMLAVELEPE----------AGGARQYCEAL-KARGLLAKDT----HDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred C-EEEEEEEECC----------HHHHHHHHHHH-HHCCEEECCC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 5-5999998556----------67799999999-9799598748----999899979957899999999999999966
No 208
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.56 E-value=2.5e-14 Score=107.33 Aligned_cols=341 Identities=15% Similarity=0.167 Sum_probs=179.4
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+.-||+..|. ..+. -+|.|.+|+.+.++.+. .|..+ -+....+|+.+.+... ..+.|.+++++++|..
T Consensus 50 dG~~YlD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~-~~~~~---~~~~~~lAe~l~~~~p---~~~~v~f~~sGsEAve 122 (429)
T PRK00062 50 DGNEYIDYVLSWGPMILGHAHPAVVEAVIEAAEKGL-SFGAP---TELEVKLAELVIERVP---SVEMVRMVNSGTEATM 122 (429)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHCC---CCCEEEEECCHHHHHH
T ss_conf 999998833076650018997999999999986357-66699---7899999999985589---8777987187699999
Q ss_pred CCCCCC---CCCCCCCCCCCCCCCCCCCCC-CCC--CCCCCC------CCCCC-CCCCC---CHHHHHHCCCCC---CCC
Q ss_conf 222222---332232222333323222222-222--222222------22222-23222---103331000122---122
Q gi|254780602|r 106 NALMAT---VNMGDEVLIPRPYWVSYPDMV-ALC--GGIPVF------VDTQQ-DDNFQ---VSPEKLEQAITP---KTK 166 (400)
Q Consensus 106 ~~~~~~---~~~Gd~Vlv~~P~y~~y~~~~-~~~--g~~~~~------v~~~~-~~~~~---~d~~~l~~~i~~---~~k 166 (400)
.+++.- +. .+.|+...-+|-.+...+ ... |..... +|... ++-+. -|++.+++.+.+ ++-
T Consensus 123 ~AiklAR~~tg-r~~ii~~~g~YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~~~~~l~~~~~~iA 201 (429)
T PRK00062 123 SAIRLARGFTG-RDKIIKFEGCYHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTLTAPYNDLEAVKAAFEEYGDEIA 201 (429)
T ss_pred HHHHHHHHHHC-CCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEE
T ss_conf 99999976118-87621114656688620565348975446789988997644475263057778888999985688656
Q ss_pred CEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 0121135-42100001-233332111223333320111012211000001223-32221112333225741465443223
Q gi|254780602|r 167 WLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF-SNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 167 ~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~-~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
++++ -| .--.|.+. +++-++++-++| +++++++|.||+...|.. +.-+ .....+.|+ |+ +++|..+
T Consensus 202 Aviv-EPi~g~~G~i~p~~~yl~~lr~lc-~~~giLlI~DEV~tGfRt-G~~~a~e~~gv~PD-----i~--t~gK~lg- 270 (429)
T PRK00062 202 CVIV-EPVAGNMGCVPPLPGFLEGLRELT-DENGALLIFDEVMTGFRV-AYGGAQGYYGVTPD-----LT--TLGKVIG- 270 (429)
T ss_pred EEEE-EEECCCCCEEECCHHHHHHHHHHH-CCCCEEEEEECCCCCEEC-CCCHHHCCCCCCCC-----EE--EECCCCC-
T ss_conf 9997-432377861448889999999996-046647999714257005-76435417899896-----89--9632347-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC---CCC
Q ss_conf 4454442211012268753100---1222332222222222223467--6432222221100000002455304---776
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV---PGI 315 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~---~g~ 315 (400)
.|+-+|.+++.+++++.+.... ...+++.++++..|+.+.|+.- ++.+++ .++.-+++.+.|+++ .++
T Consensus 271 gG~Pi~av~~~~eim~~~~~~g~~~~~gTf~gnpla~AAa~a~L~~l~~~~l~~~----~~~~G~~l~~~l~~~~~~~~~ 346 (429)
T PRK00062 271 GGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLRLLDQEGVYET----LDALTDRLAEGLKEAAEKAGI 346 (429)
T ss_pred CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHHCCC
T ss_conf 9875378867799998637589841258788887999999999999973579999----999999999999999987799
Q ss_pred E-EEECCCCEEE-EEECCCCCCCCCCCCCCCCCH---HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHH
Q ss_conf 0-3302740899-862641023321133224898---9999999987397998350228997289996299999999999
Q gi|254780602|r 316 R-YMIPDGAFYL-YPSCQDLIGKKSPSGDVIRTD---LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACV 390 (400)
Q Consensus 316 ~-~~~p~g~~y~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~ 390 (400)
. .....|.++- ++.-........ ....+. ..|...|+ ++||.+.|.. |. + ..+|++.++++++++++
T Consensus 347 ~~~v~G~G~m~~i~f~~~~~~~~~~---~~~~d~~~~~~~~~~m~-~~Gv~~~p~~-~~--~-~~ls~aht~~did~~l~ 418 (429)
T PRK00062 347 PLVVNRVGSMFGIFFTDEPVTNYED---AKASDTERFARFFHAML-EEGVYLAPSQ-FE--A-GFVSTAHTDEDIEKTLA 418 (429)
T ss_pred CEEEEEECCEEEEEECCCCCCCHHH---HHHCCHHHHHHHHHHHH-HCCCCCCCCC-CC--C-CEEECCCCHHHHHHHHH
T ss_conf 8799965747899964898889899---86442999999999999-7886447864-24--7-11033589999999999
Q ss_pred HHHHHHHHCC
Q ss_conf 9999998609
Q gi|254780602|r 391 RIKRFCHSLQ 400 (400)
Q Consensus 391 rl~~~l~~l~ 400 (400)
++++.++.|.
T Consensus 419 a~~~al~~l~ 428 (429)
T PRK00062 419 AAREAFAALA 428 (429)
T ss_pred HHHHHHHHHH
T ss_conf 9999999984
No 209
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.56 E-value=4e-14 Score=106.07 Aligned_cols=333 Identities=15% Similarity=0.132 Sum_probs=185.8
Q ss_pred HCCCCEEECCCCC--CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--74988999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.+|+..+|+..|. ..+.-.|.|.+|+.+.++.- .+.+..-..++++.+++.+-.. ....+++++++++|..
T Consensus 26 ~dG~~ylD~~~g~~~~~lGh~p~i~~ai~~q~~~~--~~~~~~~~~~~~~~la~~l~~~-----~~~~~~f~~SGSEAve 98 (375)
T PRK04260 26 TTGKTYLDFSSGIGVTNLGFHPQVQQALTDQAGLI--WHSPNLYLSSLQEEVAQKLTGD-----KDYLAFFCNSGAEANE 98 (375)
T ss_pred CCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHC--CCCCHHHHHHHHHHHHHHCCCC-----CCCEEEECCCHHHHHH
T ss_conf 97799999153787640278999999999998565--6987477889999999852366-----6747997086789999
Q ss_pred CCCCCCC-CC-CCCCCCCCCCCCCCCC-CCCCCCCCCCCC---CCCCCCCC--CCHHHHHHCCCCCCCCCEEECCC-CCC
Q ss_conf 2222223-32-2322223333232222-222222222222---22222322--21033310001221220121135-421
Q gi|254780602|r 106 NALMATV-NM-GDEVLIPRPYWVSYPD-MVALCGGIPVFV---DTQQDDNF--QVSPEKLEQAITPKTKWLFLNSP-SNP 176 (400)
Q Consensus 106 ~~~~~~~-~~-Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~v---~~~~~~~~--~~d~~~l~~~i~~~~k~i~l~nP-~NP 176 (400)
.+++..- .. .++|+...-+|-.... .....|.....- +..+.-.+ .-|++.+++...++..++++- | +--
T Consensus 99 ~AlklAr~~tgr~~ii~~~~~yHG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~~~~~~~~~iAAiiiE-piqg~ 177 (375)
T PRK04260 99 AAIKLARKATGKQEIITFQNSFHGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLE-LVQGE 177 (375)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCEEEEEE-EECCC
T ss_conf 99998765479986999778899674401220487433457788998734521045889998637783599998-10588
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 00001-2333321112233333201110122110000012233-222111233322574146544322344544422110
Q gi|254780602|r 177 SGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 177 TG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
.|.+. +++-+++|.++| +++|+++|.||+...|.=.|.-+. ....+.|+ |++ ++|.++ .|+-+|.+++.
T Consensus 178 ~G~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv~--~gKglg-~G~P~sav~~~ 248 (375)
T PRK04260 178 SGVLPADKAFVKALADYC-QETGILLIVDEVQTGIGRTGKLYAFEHYGIEPD-----IFT--LAKGLA-NGLPVGAMLGK 248 (375)
T ss_pred CCCCCCCHHHHHHHHHHH-HHHCCCEEEECCCCCCCCCCCCCHHHCCCCCCC-----EEE--ECHHCC-CCCCEEEEEEC
T ss_conf 987578989999999999-984762573012117876568655431698887-----898--710104-88643999986
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCC
Q ss_conf 122687531001222332222222222223467--643222222110000000245530477603302740899862641
Q gi|254780602|r 255 LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQD 332 (400)
Q Consensus 255 ~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~ 332 (400)
+++.+.+.......+.+.+++...++.+.|+.- ++.+++.++.-+.-++.+.+.+++.|.+.-++.. |+++=+++.
T Consensus 249 ~~i~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~~~~~~~~i~~vRG~-Gl~~gie~~- 326 (375)
T PRK04260 249 SSLGGAFGYGSHGSTFGGNKLSMAAAKATLEIMLTAGFLETVLSKGNKLQEQLQEALQDKETVTTVRGL-GYMIGIETT- 326 (375)
T ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE-EEEEEEEEC-
T ss_conf 787446678785777998989999999999999864699999999999999999998539973763055-799999957-
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHH
Q ss_conf 023321133224898999999998739799835022899728999--6299999999999999999
Q gi|254780602|r 333 LIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l 396 (400)
.+..+++..+ .+.|+++.++. .+.||+. +..+++++++++++|++.+
T Consensus 327 ------------~~~~~~~~~~-~~~Gll~~~~g----~nvi~~~Ppl~it~~eid~~~~~l~~vF 375 (375)
T PRK04260 327 ------------ADLSQLVQAA-RDKGLIILTAG----TNVIRLLPPLTISKAEIEKGIAILSEIF 375 (375)
T ss_pred ------------CCHHHHHHHH-HHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf ------------8999999999-96896994079----9989998993488999999999999869
No 210
>PRK07678 aminotransferase; Validated
Probab=99.55 E-value=1.2e-13 Score=103.10 Aligned_cols=352 Identities=11% Similarity=0.081 Sum_probs=177.7
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|++.||+..|-- .+. -+|.|.+|+++.++... .++..... +.+..+|+.+.+..+.+ ..|++++++++|..
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~l~-~~~~~~~~-~~~~~lae~L~~~~p~~---~~vff~~SGsEAvE 119 (451)
T PRK07678 45 QGKRYLDGMSGLWCVNVGYGRKELAEAAYEQLQTLS-YFPLSQSH-EPAIKLAEKLNEWLGGE---YVIFFSNSGSEANE 119 (451)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCCCCC-HHHHHHHHHHHHHCCCC---CEEEECCCHHHHHH
T ss_conf 889999987089863426996999999999997588-86775346-89999999999757976---18995397389999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCC---C---------CCCCCC----C-CCCC----C-CCHH
Q ss_conf 2222223-------3223-2222333323222222-22222---2---------222222----2-2232----2-2103
Q gi|254780602|r 106 NALMATV-------NMGD-EVLIPRPYWVSYPDMV-ALCGG---I---------PVFVDT----Q-QDDN----F-QVSP 154 (400)
Q Consensus 106 ~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~~~-~~~g~---~---------~~~v~~----~-~~~~----~-~~d~ 154 (400)
.++...- +++- .|+...-+|-.....+ ...|. + .++++. . +.+. + .-..
T Consensus 120 ~AiKlAr~y~~~~g~~~r~~ii~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~~~~~~~~~~~~~ 199 (451)
T PRK07678 120 TAFKIARQYHAQKGEPHRYKFISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPGIESEDIYDLECV 199 (451)
T ss_pred HHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999998609997424346267403897234511574310578888888815738984235776665226679999
Q ss_pred HHHHCCCC----CCCCCEEECCC--CCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 33100012----21220121135--421000012-3333211122333332011101221100000122332-2211123
Q gi|254780602|r 155 EKLEQAIT----PKTKWLFLNSP--SNPSGVVYS-QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPS 226 (400)
Q Consensus 155 ~~l~~~i~----~~~k~i~l~nP--~NPTG~v~s-~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~ 226 (400)
+++++.+. +++-+|++ -| .+ .|.+.+ ++-+++|-++| +++|+++|.||+...|.=.|.-+.. -..+.|+
T Consensus 200 ~~le~~i~~~~~~~iAaii~-EPi~g~-gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 276 (451)
T PRK07678 200 KEIDRVMTWELSETIAAFIM-EPIITG-GGILMPPQDYMKAVHEIC-QKHGALLISDEVICGFGRTGKAFGFMNYGVKPD 276 (451)
T ss_pred HHHHHHHHHCCCCCEEEEEE-EECCCC-CCCCCCCHHHHHHHHHHE-EECCCEEEECCCCCCCCCCCCCCCHHHCCCCCC
T ss_conf 99999987507886799999-753777-882318879867787741-245955773224027874566500110595277
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 3322574146544322344-54442211012268753100------1222332222222222223467--6432222221
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ------GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKI 297 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~ 297 (400)
| -+++|.++ .| +-+|.+++.+++.+.+.... ...+.+.+.+...++.+.|+.- +..+++.++.
T Consensus 277 -----i--v~~gK~l~-gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~l~~~~l~~~~~~~ 348 (451)
T PRK07678 277 -----I--ITMAKGIT-SAYLPLSATAVKKEIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIMENENLIERSAQL 348 (451)
T ss_pred -----E--EEECCCCC-CCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf -----2--00133445-777761677762989976357887666434788987989999999999998415099999999
Q ss_pred CCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--CCCCEEE
Q ss_conf 10000000245530477603302740899862641023321133224898999999998739799835022--8997289
Q gi|254780602|r 298 FEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--GHGPSIR 375 (400)
Q Consensus 298 ~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--g~~~~iR 375 (400)
-+.-++.+.+.+++.+-+.=++.. |+++=+++-.-.....+.... ....++..+ .+.|+++.+.-.. +.++.+|
T Consensus 349 g~~l~~~L~~~~~~~p~i~dVRG~-GLm~gielv~d~~~~~p~~~~--~~~~i~~~~-~~~Glli~~~g~~~~~~~n~lr 424 (451)
T PRK07678 349 GSLLLEQLKEELGEHPLVGDIRGK-GLLVGIELVNDKETKEPADND--KVASVVNAC-KEKGLIIGKNGMTVAGYNNVLT 424 (451)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEECCCCCCCCCCHH--HHHHHHHHH-HHCCCEEECCCCCCCCCCCEEE
T ss_conf 999999999997459988887616-568999985366557879999--999999999-9779888147873257899899
Q ss_pred EE--EECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99--62999999999999999998609
Q gi|254780602|r 376 IS--YAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 376 is--~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
++ +..+++++++++++|.+.|+++|
T Consensus 425 ~~PPL~it~~eid~~~~~l~~al~~v~ 451 (451)
T PRK07678 425 LAPPLCISSEELAFVVGTLKTAMERIK 451 (451)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 978824889999999999999999639
No 211
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.55 E-value=6.9e-14 Score=104.64 Aligned_cols=221 Identities=14% Similarity=0.156 Sum_probs=131.8
Q ss_pred CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 699877-89899999999864210133332233233454333322222223322322223333232222----2222222
Q gi|254780602|r 63 KYTAVA-GISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGG 137 (400)
Q Consensus 63 ~Y~~~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~ 137 (400)
+|.-++ |.| .++++.+.+...-| .+.-++++.++.||..++.+++++||+|++.+..|..-.. .+...|.
T Consensus 55 ~y~YsR~gnP-T~~~lE~~la~LEg----~~~a~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~Yg~T~~l~~~~l~~~Gi 129 (384)
T PRK06434 55 PYIYTRWGNP-TVQAFEEKYAVLEN----AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGI 129 (384)
T ss_pred CCEECCCCCH-HHHHHHHHHHHHHC----CCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 9225389886-69999999999849----980999768999999999996189998998079827779999988875697
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 22222222223222103331000122122012113542100001233332111223333320111012211000001223
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
++.+++.+ +++.++ ...++||+||+-+|.|||..+.+ +++|+++| ++++ ||+|..+.-=.+ .
T Consensus 130 ~v~~vd~~-------~~~~~~-~~~~~tklv~~Esp~NP~l~v~D---i~aia~~A-~~~~--vvVDNTfatP~~----~ 191 (384)
T PRK06434 130 HVDYIDTD-------RLNSLD-FDPSNYDLIYAESITNPTLKVPD---IKNVSSFC-HEND--VIVDATFASPYN----Q 191 (384)
T ss_pred EEEEECCC-------CHHHHH-HCCCCCEEEEEECCCCCCCCCCC---HHHHHHHH-CCCC--EEEECCCCCCCC----C
T ss_conf 27995786-------578896-07468649999889998763156---79999764-1598--477547652013----7
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCC-CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 322211123332257414654432234454-44221-1012268753100122233222222222222346764322222
Q gi|254780602|r 218 SNIVNVEPSLYERTLVVNGVSKAYAMTGLR-IGYAA-GALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNR 295 (400)
Q Consensus 218 ~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R-iG~~v-~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~ 295 (400)
.++ .+ + --|++.|.||.++--|=- .|.++ .++++.+++...+.....++++...+.+...|+. +.-..
T Consensus 192 ~Pl-~~--G---aDivihS~TKYi~GHsDvl~G~v~~~~~~~~~~l~~~~~~~G~~~sP~~a~L~lrGL~T----L~lRm 261 (384)
T PRK06434 192 NPL-DL--G---ADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKT----LGLRM 261 (384)
T ss_pred CCC-CC--C---CCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCC----HHHHH
T ss_conf 831-03--8---98799703520068888668645058899999999998614898986889999826763----99999
Q ss_pred CCCCCCCCCHHHHHHCCCCCE
Q ss_conf 211000000024553047760
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~~g~~ 316 (400)
++-.++...+.+.|++.|.++
T Consensus 262 ~r~~~nA~~vA~~L~~hp~V~ 282 (384)
T PRK06434 262 EKHNKNGMELARFLRDSKKIS 282 (384)
T ss_pred HHHHHHHHHHHHHHHHCCCCC
T ss_conf 999999999999998099933
No 212
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=1.4e-13 Score=102.79 Aligned_cols=347 Identities=13% Similarity=0.109 Sum_probs=179.4
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|.- .+. -+|.|.+|+++.++.- ..|++..-..+.+..+|+.+.+....+. ...|.++++++++..
T Consensus 43 dG~~yLD~~sg~~~~~lGh~~p~v~~Ai~~ql~~l-~~~~~~~~~~~~~~~la~~L~~~~p~~~-~~~v~f~~SGsEAvE 120 (448)
T PRK08593 43 EGKTYIDLLASASSQNVGHAPPEVVEAIKAQADKF-IHYTPAYMYHEPLVRLAKKLCELAPGDF-EKRVTFGLSGSDAND 120 (448)
T ss_pred CCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHHHHHHHHHCCCCC-CCEEEECCCHHHHHH
T ss_conf 96999993523764010489899999999998407-6736663146799999999998578676-637997187578999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCC-CCCCCCC-------------CCCCCCCCC-------CC--CCC-CHHHHHHC
Q ss_conf 222222-3322-322223333232222-2222222-------------222222222-------23--222-10333100
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPD-MVALCGG-------------IPVFVDTQQ-------DD--NFQ-VSPEKLEQ 159 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~-~~~~~g~-------------~~~~v~~~~-------~~--~~~-~d~~~l~~ 159 (400)
.++... ...| ..|+...-+|-.-.. .....|. ..+.+|... +. .+. -..+.+++
T Consensus 121 ~AlKlAr~~tgr~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~p~~p~~~~vp~p~~~~~~~~~~~~~~~~~~~~~~~~ 200 (448)
T PRK08593 121 GIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSAISLNMRKKYGPLLPGFYHIPFPDKYRGMYEEPQANSVEEYLAPLKE 200 (448)
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999975489987999947877687340010478756544568999995780798633454578706799999999999
Q ss_pred CC----C-CCCCCEEECCCCCCC-CC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEE
Q ss_conf 01----2-212201211354210-00-012333321112233333201110122110000012233-2221112333225
Q gi|254780602|r 160 AI----T-PKTKWLFLNSPSNPS-GV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERT 231 (400)
Q Consensus 160 ~i----~-~~~k~i~l~nP~NPT-G~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~ 231 (400)
.+ . +++-++++ -|=.-. |. ..+++-++++-++| +++|+++|.||+...+.=.|.-+. .-..+.|+
T Consensus 201 ~~~~~~~~~~iAAvi~-EPvqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD----- 273 (448)
T PRK08593 201 MFEKYVPADEVACIVI-ETIQGDGGLLEPVPGYFEALYKFC-REHGILFAVDDIQQGLGRTGKWSSISHFNITPD----- 273 (448)
T ss_pred HHHHCCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEEEECCCCCCCCCHHHHHCCCCCC-----
T ss_conf 9985178897699999-788788898738878868999999-866806987430017775676035543052888-----
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 74146544322344544422110122687531001222332222222222223467--6432222221100000002455
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 232 i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L 309 (400)
|+ +++|..+ .|+-+|.+++.+++.+.+.......+.+.+.+...++.+.|+.- +..+++ .++.-+++.+.|
T Consensus 274 iv--~~gKgl~-gG~Plsav~~~~ei~~~~~~~~h~~T~~Gnpla~aaa~a~L~~i~~~~l~~~----~~~~g~~l~~~L 346 (448)
T PRK08593 274 LM--TFGKSLA-GGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCEAALATIDMIEDESLLQA----SAEKGEYVRKRF 346 (448)
T ss_pred EE--EECCCCC-CCCCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHH
T ss_conf 67--7730025-8874079987589885217886565789998999999999999974439999----999999999999
Q ss_pred H----CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHH
Q ss_conf 3----0477603302740899862641023321133224898999999998739799835022899728999--629999
Q gi|254780602|r 310 Q----GVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDA 383 (400)
Q Consensus 310 ~----~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e 383 (400)
+ +.|.+.-++..| +++=+++-.-.....+. ..-..+++..++ ++|+++.+.. ++.+|++ +..+++
T Consensus 347 ~~l~~~~p~v~dVRG~G-L~~giElv~~~~~~~~~---~~~~~~v~~~~~-~~Gll~~~~~----gn~ir~~PpL~it~~ 417 (448)
T PRK08593 347 DQWVSKYNFVGDVRGKG-LSIGIDIVSDKKLKTRD---AEAALKICNYCF-EHGVVIIAVA----GNVLRFQPPLVITYE 417 (448)
T ss_pred HHHHHCCCCEEEECCCC-EEEEEEEEECCCCCCCC---HHHHHHHHHHHH-HCCEEEEECC----CCEEEEECCCCCCHH
T ss_conf 99986299788730255-17899996455557888---899999999999-7890898679----998999789008899
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998609
Q gi|254780602|r 384 ILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 384 ~l~~al~rl~~~l~~l~ 400 (400)
++++++++|++.|.+++
T Consensus 418 eid~~~~~l~~al~~l~ 434 (448)
T PRK08593 418 QLDTALNTIEDALTALE 434 (448)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999987
No 213
>PTZ00125 ornithine aminotransferase; Provisional
Probab=99.54 E-value=1.5e-13 Score=102.54 Aligned_cols=336 Identities=12% Similarity=0.085 Sum_probs=181.8
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..||+..|.- .+. -+|.|.+|+++.++...+ ....-..+..+..++.+.... ..+.|++++++++|..
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~--~~~~~~~~~~~~a~~~l~~~~----g~~~v~f~~SGsEA~e 120 (415)
T PTZ00125 47 EGKKYFDFLSAYSAVNQGHCHPKILEALINQAKKLTL--SSRAFYNQKLGEAEKYITNLF----GYDKVLFMNTGAEANE 120 (415)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHHCC----CCCEEEECCCHHHHHH
T ss_conf 8899878240688634427979999999999965787--767534589999999998554----9988995387588999
Q ss_pred CCCCCCC---------CCCC-CCCCCCCCCCCCCCCC-CCCCCC---CCCCCCCCCCCCC--CHHHHHHCCCCC--CCCC
Q ss_conf 2222223---------3223-2222333323222222-222222---2222222223222--103331000122--1220
Q gi|254780602|r 106 NALMATV---------NMGD-EVLIPRPYWVSYPDMV-ALCGGI---PVFVDTQQDDNFQ--VSPEKLEQAITP--KTKW 167 (400)
Q Consensus 106 ~~~~~~~---------~~Gd-~Vlv~~P~y~~y~~~~-~~~g~~---~~~v~~~~~~~~~--~d~~~l~~~i~~--~~k~ 167 (400)
.+++..- ..+. .|+...-+|-.....+ ...+.. -.+-|+.+.-.+. .|++.+++.+.. ++-+
T Consensus 121 ~AiklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~~~~iAA 200 (415)
T PTZ00125 121 TAVKFARRWGYAVKGIPENQAKIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHKVDYNDLEALEKLLSKDPNVCA 200 (415)
T ss_pred HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEE
T ss_conf 99999989877416777896059997388688844543344574334577888897077046768999999604997689
Q ss_pred EEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 121135-42100001-23333211122333332011101221100000122332-2211123332257414654432234
Q gi|254780602|r 168 LFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 168 i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (400)
+++ -| +.-.|.+. +++.+++|.++| +++++++|.||+...+.=.|.-+.. -..+.|+ |+ +++|..+ .
T Consensus 201 vii-EPi~g~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--~~gKgl~-g 270 (415)
T PTZ00125 201 FIV-EPIQGEAGVIVPDEGYLKQVYSLC-KKYNVLLVADEVQTGLGRTGKLLAVDHEGVKPD-----IV--LLGKALS-G 270 (415)
T ss_pred EEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHHCCEEECCCCEECCCCCCCCCCCCCCCCCCC-----EE--EECCCCC-C
T ss_conf 997-465687884269999999999999-984876764522416775676212017897998-----21--0031446-8
Q ss_pred C-CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHC---CCCCEEE
Q ss_conf 4-544422110122687531001222332222222222223467--643222222110000000245530---4776033
Q gi|254780602|r 245 G-LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQG---VPGIRYM 318 (400)
Q Consensus 245 G-~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~---~~g~~~~ 318 (400)
| +-+|.+++.+++.+.+..-....+.+.+.+...++.+.|+.- ++.++ ..++.-+++.+.|++ .+-+.-+
T Consensus 271 G~~Plsav~~~~~i~~~~~~~~h~~T~~gnpla~Aaa~a~L~~i~~~~l~~----~v~~~G~~l~~~L~~L~~~p~v~~V 346 (415)
T PTZ00125 271 GHLPISAVLANDDVMLTIKPGEHGSTYGGNPLAAAVCKEALEVLSEEKLAE----NAQKLGKYFRKGLKKLKKSPIVEIV 346 (415)
T ss_pred CCCCCEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 877620353349999632689988899818999999999999998646999----9999999999999987469976987
Q ss_pred ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHH
Q ss_conf 02740899862641023321133224898999999998739799835022899728999--6299999999999999999
Q gi|254780602|r 319 IPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l 396 (400)
+..| +++=+++... ......+++.++ .+.||++.|+. ++.||++ +..+++++++++++|++.|
T Consensus 347 RG~G-l~~giel~~~---------~~~~~~~i~~~~-~~~Gll~~~~g----~~vir~~PPL~it~~eid~~l~~l~~aL 411 (415)
T PTZ00125 347 RGKG-LLNAIQFDPN---------VSNVAWDICLKF-KENGLLCKPTH----DDIIRLTPPLTITKEQLDQCLLIIKKVL 411 (415)
T ss_pred ECCC-EEEEEEEECC---------CCHHHHHHHHHH-HHCCEEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 0078-1999998579---------765899999999-95996996079----9989998993389999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
++|
T Consensus 412 ~~l 414 (415)
T PTZ00125 412 KSF 414 (415)
T ss_pred HHC
T ss_conf 961
No 214
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=99.54 E-value=6.2e-14 Score=104.95 Aligned_cols=347 Identities=16% Similarity=0.142 Sum_probs=182.0
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|. ..+. -+|.|.+|+.+.+.++.. |..+ -+..-.+|+.+.+... ..++|.+++++++|..
T Consensus 48 dGn~YiD~~~g~g~~~lGH~~p~v~~Av~~q~~~~~~-~~~~---~~~~~~lAe~L~~~~P---~~~~v~f~~SGsEA~e 120 (425)
T PRK06942 48 DGKRYIDYIGSWGPMIVGHVHPEVLRAVQRVLADGFS-FGAP---TEAEIEIAEEICKLVP---SIEQVRMVSSGTEATM 120 (425)
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCC---CHHHHHHHHHHHHHCC---CCCEEEEECCHHHHHH
T ss_conf 8998888234288654288979999999999985785-7899---7899999999998588---9885987388799999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCC-CCCCCC------CC--CCCCCC--CCC---CCCCHHHHHHCCCCC---CCC
Q ss_conf 222222-3322-3222233332322222-222222------22--222222--223---222103331000122---122
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDM-VALCGG------IP--VFVDTQ--QDD---NFQVSPEKLEQAITP---KTK 166 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~-~~~~g~------~~--~~v~~~--~~~---~~~~d~~~l~~~i~~---~~k 166 (400)
.+++.- ..+| +.|+...-+|-.+... ....|. .+ ..+|.+ ... .| -|++++++.+.. ++-
T Consensus 121 ~AiklAR~~tgr~~ii~~~g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~~~~~-nd~~~l~~~~~~~~~~iA 199 (425)
T PRK06942 121 SALRLARGFTGRSRIVKFEGCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTTVLEY-NNVAALEEAFAAFGGEIA 199 (425)
T ss_pred HHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCHHHHHHHHHHCCCCEE
T ss_conf 9999961034798653123451477410212137876555888656887654576646676-768889999984389668
Q ss_pred CEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 0121135-4210000-1233332111223333320111012211000001223322211123332257414654432234
Q gi|254780602|r 167 WLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 167 ~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (400)
++++ -| ..-.|.+ .+++-+++|-++| +++++++|.||+...|.....-......+.|+ |+ +++|..+ .
T Consensus 200 AvI~-EPi~g~~G~i~p~~~yl~~lr~lc-~~~gilLI~DEV~TGfR~g~~~a~~~~gv~PD-----i~--t~gK~ig-g 269 (425)
T PRK06942 200 AVIV-EPVAGNMNLVRGTPEFLNALRALC-TKHGAVLIFDEVMCGFRVALGGAQQHYGITPD-----LT--CLGKVIG-G 269 (425)
T ss_pred EEEE-CCCCCCCCCCCCCHHHHHHHHHHH-CCCCEEEEEECCCCCCCCCCCHHHHHHCCCCC-----EE--EEHHHCC-C
T ss_conf 9995-564477875028989999999986-13783899974625740676538762189987-----99--8710057-9
Q ss_pred CCCCCCCCCHHHHHHHHHHH---CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE-
Q ss_conf 45444221101226875310---01222332222222222223467--6432222221100000002455304776033-
Q gi|254780602|r 245 GLRIGYAAGALSLIKSMIVL---QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM- 318 (400)
Q Consensus 245 G~RiG~~v~~~~li~~l~~~---~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~- 318 (400)
|+-+|.+++.+++++.+... ....+.+.+++...|+++.|+.- ++.++...+.-++-++-+.+.+++. |+.+.
T Consensus 270 G~Pi~Av~g~~eim~~~~~~g~~~h~gTf~gnp~a~AAalatL~~~~~~~~~~~~~~~g~~L~~gl~~~~~~~-g~~~~~ 348 (425)
T PRK06942 270 GMPAAAFGGRRDIMAHLAPLGGVYQAGTLSGNPIAVAAGLKTLRLIQAPGFYDALAAQTRRLADGLAAEARAA-GVPFAA 348 (425)
T ss_pred CCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEEE
T ss_conf 8870210259999975067888722789987879999999999998456799999999999999999999977-998899
Q ss_pred ECCCCEE-EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 0274089-986264102332113322489899999999873979983502289972899962999999999999999998
Q gi|254780602|r 319 IPDGAFY-LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 319 ~p~g~~y-~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~ 397 (400)
..-|++| ++..-................-..|...++ +.||.+.|+.. ..++ +|++-++++|++.++..+++++
T Consensus 349 ~g~gs~f~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~Gv~~~p~~~---~~~f-~s~aHt~~did~~l~a~~~a~~ 423 (425)
T PRK06942 349 DSIGGMFGLYFTERVPTSFAEVTKSDVERFNRFFHLML-DEGVYFAPSAY---EAGF-VSSTHDDAVLDATLDAARRAFA 423 (425)
T ss_pred EEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHH-HCCCCCCCCCH---HCCC-CCCCCCHHHHHHHHHHHHHHHH
T ss_conf 65376479986899999999998554999999999999-78967798524---2176-2303799999999999999997
Q ss_pred HC
Q ss_conf 60
Q gi|254780602|r 398 SL 399 (400)
Q Consensus 398 ~l 399 (400)
+|
T Consensus 424 ~l 425 (425)
T PRK06942 424 AL 425 (425)
T ss_pred HC
T ss_conf 39
No 215
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=1e-13 Score=103.63 Aligned_cols=332 Identities=16% Similarity=0.173 Sum_probs=193.6
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388---756998778989999999986421013333223323345433
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERG---ETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~---~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+|++-|||..|- ..+. .+|.+.+|+++.++.= .+.|. .+.+.++++.+.+..+ ..|.|++.|++++
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s~---~~d~vff~NSGaE 111 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELSP---FADRVFFCNSGAE 111 (404)
T ss_pred CCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCC-----CHHHHHHHHHHHHHCC---CCCEEEECCCCHH
T ss_conf 9887666035511102577898999999999977621131337-----8699999999996286---6668997578389
Q ss_pred CCCCCCCCC---CC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCC--HHHHHHCCCCCCCCCEEEC
Q ss_conf 332222222---33-22-32222333323222222222222222----22222232221--0333100012212201211
Q gi|254780602|r 103 VIFNALMAT---VN-MG-DEVLIPRPYWVSYPDMVALCGGIPVF----VDTQQDDNFQV--SPEKLEQAITPKTKWLFLN 171 (400)
Q Consensus 103 ~l~~~~~~~---~~-~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~~~~--d~~~l~~~i~~~~k~i~l~ 171 (400)
|...++..- .. |+ .+|+...=+|-.-...+-..+.++.+ -|+.+.-.+.| |+++++++|+++|-+|++-
T Consensus 112 A~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvivE 191 (404)
T COG4992 112 ANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVIVE 191 (404)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCCCCCCCCEECCCCCHHHHHHHHCCCEEEEEEE
T ss_conf 99999999999708888757999747757766233665688422267889999953617899899998736575899982
Q ss_pred CC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 35-42100001-23333211122333332011101221100000122332-22111233322574146544322344544
Q gi|254780602|r 172 SP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGLRI 248 (400)
Q Consensus 172 nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~Ri 248 (400)
| +-=.|.+. +++.++++-++| ++||+++|.||+-..+.=.|+-+-. -..+.|+ +-++.|.++ .|+-+
T Consensus 192 -PIQGEgGV~~~~~~fl~~lr~lC-d~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PD-------I~tlaK~Lg-GG~Pi 261 (404)
T COG4992 192 -PIQGEGGVIPAPPEFLKALRELC-DEHGALLILDEVQTGLGRTGKLFAYEHYGVEPD-------ILTLAKALG-GGFPI 261 (404)
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHH-HHHCEEEEEECCCCCCCCCCHHHHHHHHCCCCC-------EEEEECCCC-CCCCC
T ss_conf -66688898779989999999999-871929999643138886631789897488877-------788601245-88332
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCC----CEEEECCC
Q ss_conf 422110122687531001222332222222222223467--643222222110000000245530477----60330274
Q gi|254780602|r 249 GYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPG----IRYMIPDG 322 (400)
Q Consensus 249 G~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g----~~~~~p~g 322 (400)
|.+++.+...+.+..-..-++++-+.+...++.+.|+-- ++.+++ .+++-+++.+.|+++.. ++=++..
T Consensus 262 gA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~----v~~~g~~~~~~L~~l~~~~~~v~~vRG~- 336 (404)
T COG4992 262 GAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLEN----VREKGEYLLQRLRELKRRYPLVKEVRGR- 336 (404)
T ss_pred EEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHCCCCEEEEECC-
T ss_conf 35577426662478876567778679999999999999800308999----9999999999999975127721224215-
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 0899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+.+=+.+.... ...+++..+ .++||++.+.. ++-+|+. +..++|+++++++||++.++..
T Consensus 337 GLmiGiel~~~~-----------~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~al~~~ 399 (404)
T COG4992 337 GLMIGIELKEPY-----------RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred EEEEEEEECCCC-----------CHHHHHHHH-HHCCEEEECCC----CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 049999944764-----------579999999-97896996078----8848845875288999999999999999965
No 216
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.54 E-value=4.6e-14 Score=105.70 Aligned_cols=228 Identities=21% Similarity=0.294 Sum_probs=131.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 569987789899999999864210133332233233454333322222223322322223333232222----2222222
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD----MVALCGG 137 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~----~~~~~g~ 137 (400)
+-|+-. |. +.|+++.+.+...- ..++.+.++.+..||..++.+++++||+|+++...|..-.. ..+..|.
T Consensus 55 ~~Y~R~-~n-PT~~~lE~~~a~LE----g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi 128 (396)
T COG0626 55 YDYSRT-GN-PTRDALEEALAELE----GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGV 128 (396)
T ss_pred CCCCCC-CC-CCHHHHHHHHHHHH----CCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCE
T ss_conf 514057-89-63799999999860----9883799537399999999983579998984577643299999999985685
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 2222222222322210333100012-212201211354210000123333211122333332011101221100000122
Q gi|254780602|r 138 IPVFVDTQQDDNFQVSPEKLEQAIT-PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ 216 (400)
Q Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~i~-~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~ 216 (400)
++.+++.. +.+++.+++. ++||+|++-+|.|||-.+.+ +.+|+++ ++.+++.+|.|+.+..-+|.
T Consensus 129 ~~~~~d~~-------~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~-A~~~g~~vvVDNTfatP~~q--- 194 (396)
T COG0626 129 EVTFVDPG-------DDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARL-AKAYGALVVVDNTFATPVLQ--- 194 (396)
T ss_pred EEEEECCC-------CHHHHHHHHCCCCCEEEEEECCCCCCCCCCC---HHHHHHH-HHHCCCEEEEECCCCCCCCC---
T ss_conf 99997899-------7588998744668349999679996305556---9999999-98649889998896622016---
Q ss_pred CCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHH-HHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33222111233322574146544322344-54442211012268753-1001-222332222222222223467643222
Q gi|254780602|r 217 FSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMI-VLQG-QQTSGACSIAQWAAVEALNGPQDFVVN 293 (400)
Q Consensus 217 ~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~-~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~ 293 (400)
.+ +.+ + --|+++|.+|.++--+ .=.|.++++.+.+.... .... ++...++....+.++..|+ . +.-
T Consensus 195 -~P-L~~--G---aDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk---T-L~~ 263 (396)
T COG0626 195 -RP-LEL--G---ADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLR---T-LAL 263 (396)
T ss_pred -CH-HHH--C---CCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC---H-HHH
T ss_conf -85-550--9---97899854333367735041688448689999999998865278788799999981715---3-999
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCE-EEEC
Q ss_conf 22211000000024553047760-3302
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIR-YMIP 320 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~-~~~p 320 (400)
..+.-.++...+.+.|++.|.++ +.-|
T Consensus 264 Rm~~~~~nA~~IA~~L~~~p~V~~V~yP 291 (396)
T COG0626 264 RMERHNENALKIAEFLADHPKVKKVYYP 291 (396)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf 9999999899999998629976899899
No 217
>PRK09044 consensus
Probab=99.53 E-value=1.9e-13 Score=101.99 Aligned_cols=334 Identities=14% Similarity=0.138 Sum_probs=182.4
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-89999999999983887569987789-8999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..|.- .+. -+|.|.+|+++.++.-. |....+. .+.+..+|+.+...... +-+.+++++++++|.
T Consensus 40 dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~~la~~L~~~~p~--~l~~v~f~~SGsEAv 115 (418)
T PRK09044 40 DGRELVDGVASWWTACHGYNHPHIAEAVREQLDRMP--HVMFGGLAHEPAYRLASRLAAILPG--DLERVFFSDSGSVAV 115 (418)
T ss_pred CCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHH
T ss_conf 999998902277965226898999999999997588--8345874677999999999985788--758698628678999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCCC----CCCCCCCCCCCC---C---CCHHHHHHCCC---C
Q ss_conf 2222222-------3322-3222233332322222-222222----222222222232---2---21033310001---2
Q gi|254780602|r 105 FNALMAT-------VNMG-DEVLIPRPYWVSYPDM-VALCGG----IPVFVDTQQDDN---F---QVSPEKLEQAI---T 162 (400)
Q Consensus 105 ~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~-~~~~g~----~~~~v~~~~~~~---~---~~d~~~l~~~i---~ 162 (400)
..+++.. ..+| ..|+...-+|-..... ....+. ...+-+..++.- + .-+.+.++..+ .
T Consensus 116 E~AiKlA~~y~~~r~~tgr~~ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~p~~~~~~~p~~~~~~~~l~~~~~~~~ 195 (418)
T PRK09044 116 EVAMKMAVQYWLNRGERGRTKFLAFRGGYHGDTLATMAVCDPEEGMHSLFAGVLPEQVIADLPRDAASEAALDALLERHG 195 (418)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 99999999999862456776289961877786666621157755766777898997614579998678999999997579
Q ss_pred CCCCCEEECCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCC
Q ss_conf 21220121135--42100001-2333321112233333201110122110000012233-22211123332257414654
Q gi|254780602|r 163 PKTKWLFLNSP--SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 163 ~~~k~i~l~nP--~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~S 238 (400)
+++-++++ -| ++-.|.+. +++.+++|-++| ++||+++|.||+...+.=.|.-+. ....+.|+ |+ +++
T Consensus 196 ~~iAavi~-EP~iqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tG~GRtG~~fa~~~~gv~PD-----iv--t~g 266 (418)
T PRK09044 196 GEIAAILV-EPLVQGAGGMLFHDPEVLRRLRRLA-DRHGLLLIFDEIFTGFGRTGTMFAFEQAGVVPD-----IV--TLS 266 (418)
T ss_pred CCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCCHHHHCCCCCC-----EE--EEC
T ss_conf 97789999-4663578987489889999999999-874986772122036876678532332595887-----24--302
Q ss_pred CCCCCCC-CCCCCCCCHHHHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 4322344-5444221101226875310------01222332222222222223467--6432222221100000002455
Q gi|254780602|r 239 KAYAMTG-LRIGYAAGALSLIKSMIVL------QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 239 K~~~~~G-~RiG~~v~~~~li~~l~~~------~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L 309 (400)
|.++ .| +-+|.+++.+++.+.+..- ....+.+.+.+...++.+.|+.- ++.+++ .+++-+++.+.|
T Consensus 267 Kgl~-gG~~Plsav~~~~~i~~~~~~~~~~~~~~hg~T~~gnpl~cAaala~L~~i~~~~l~~~----~~~~g~~l~~~L 341 (418)
T PRK09044 267 KALT-GGTLPLAATVASRRVFEAFWSDDPGHALMHGPTYMGNPLACAAANASLDLFEDEPRLEQ----VAAIEAQLRAGL 341 (418)
T ss_pred HHCC-CCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHH
T ss_conf 0014-88776102355399999750379875502178888998999999999999973479999----999999999999
Q ss_pred H---CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHH
Q ss_conf 3---0477603302740899862641023321133224898999999998739799835022899728999--6299999
Q gi|254780602|r 310 Q---GVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAI 384 (400)
Q Consensus 310 ~---~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~ 384 (400)
+ +.+.+.-++..|.| .=+++.+ ......+..+++ +.||.+.|. .+.+|++ +..++++
T Consensus 342 ~~~~~~~~v~~VRG~Glm-~~iel~~-----------~~~~~~~~~~~~-~~Gv~v~~~-----gn~irl~PpL~it~~e 403 (418)
T PRK09044 342 EPCRDLPGVVDVRVLGAI-GVVELER-----------IPPLDDLRARFV-DRGVWIRPF-----RNIVYLTPAFTIAEDD 403 (418)
T ss_pred HHHCCCCCEEEEEECCEE-EEEEECC-----------CCCHHHHHHHHH-HCCCEEEEC-----CCEEEEECCCCCCHHH
T ss_conf 975369977988005579-9999368-----------576999999999-789779745-----9999997995789999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999986
Q gi|254780602|r 385 LEEACVRIKRFCHS 398 (400)
Q Consensus 385 l~~al~rl~~~l~~ 398 (400)
+++++++|++.+..
T Consensus 404 id~~~~~l~~~l~E 417 (418)
T PRK09044 404 LARLTAAIRQVVAE 417 (418)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999857
No 218
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.53 E-value=2.1e-13 Score=101.73 Aligned_cols=347 Identities=14% Similarity=0.141 Sum_probs=182.2
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|- ..+. -+|.|.+|+++.++...+ +......+.-...+|+.+.+... .+-+.+.+++++++|.
T Consensus 38 ~dG~~yLD~~sg~~~~~lGH~~p~v~~Ai~~q~~~l~~-~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGSEAv 114 (443)
T PRK08360 38 IEGKEYIDFLSDAAVQNVGHNNPRVVKAIKEQADKLIH-ASYIYAFPVEPLLLAEKLAEIAP--IDNPKVSFGLSGGDAN 114 (443)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHH
T ss_conf 97699888122578642437969999999999863687-35775576489999999998579--9867599748678899
Q ss_pred CCCCCCC-CCCC-CCCCCCCCCCCCCCC-CCCCCCC------------CCCCCCCCC---------CCCCCCH-HHHHHC
Q ss_conf 2222222-3322-322223333232222-2222222------------222222222---------2322210-333100
Q gi|254780602|r 105 FNALMAT-VNMG-DEVLIPRPYWVSYPD-MVALCGG------------IPVFVDTQQ---------DDNFQVS-PEKLEQ 159 (400)
Q Consensus 105 ~~~~~~~-~~~G-d~Vlv~~P~y~~y~~-~~~~~g~------------~~~~v~~~~---------~~~~~~d-~~~l~~ 159 (400)
..++... ...| ..|+...-+|-.... .....|. .+.++|... ......+ .+.+++
T Consensus 115 E~AlKlAr~~tgr~~ii~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~vp~p~~~r~~~~~~~~~~~~~~~~~l~~ 194 (443)
T PRK08360 115 DGAIKFARAYTKRRKILSYMRSYYGSTYGAMSLTGLDFEVRAIVGELSDVHYIPYPNCYRCPFGKEPGSCKMECVEYLKE 194 (443)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999988762997387404665768601033137754545567899996681798643576788852136999999999
Q ss_pred CCC-----CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEE
Q ss_conf 012-----21220121135-4210000-12333321112233333201110122110000012233-2221112333225
Q gi|254780602|r 160 AIT-----PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERT 231 (400)
Q Consensus 160 ~i~-----~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~ 231 (400)
.+. +++-++++ -| +.-.|.+ .+++-+++|.++| +++|+++|.||+...|.=.|.-+. .-..+.|+
T Consensus 195 ~~~~~~~~~~iAAvii-EPvqG~gG~~~pp~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD----- 267 (443)
T PRK08360 195 KFEGEVYAEGVAALFA-EPIQGDSGMVVPPENYFKKVKKIL-DEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPD----- 267 (443)
T ss_pred HHHHCCCCCCEEEEEE-CCCCCCCCCEECCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCHHHHHHCCCCCCC-----
T ss_conf 9862036687579998-676788841868889976898877-765907985113038765440557645796986-----
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 74146544322344544422110122687531001222332222222222223467--6432222221100000002455
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 232 i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L 309 (400)
|++ ++|.++ .|+-+|.+++.+++.+.+.......+.+.+++...++.+.|+.- ++.+++ .+++-+++.+.|
T Consensus 268 iv~--~gKgl~-~G~Pisav~~~~ei~~~~~~~~h~~T~~gnpl~caaa~a~L~~i~~~~l~~~----~~~~G~~l~~~L 340 (443)
T PRK08360 268 IIT--LGKPLG-GGLPISATIGRAEIMDSLPPLSHAFTLSGNPTASRAALAVIEEIEEKDLLKR----AEKLGNYTKKRL 340 (443)
T ss_pred EEE--ECCCCC-CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHH
T ss_conf 577--634445-7888623111498985048876566878997999999999999986359999----999999999999
Q ss_pred HCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHH
Q ss_conf 304----77603302740899862641023321133224898999999998739799835022899728999--629999
Q gi|254780602|r 310 QGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDA 383 (400)
Q Consensus 310 ~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e 383 (400)
+++ +-+.-.+..|-|+ =+++-+....... .......++..++ +.|+++.+. .++.+|++ +..+++
T Consensus 341 ~~l~~~~p~i~dVRG~Gl~~-gie~v~d~~~~~~---~~~~~~~i~~~~~-~~Glli~~~----~~~~i~~~PPL~it~~ 411 (443)
T PRK08360 341 EEMKEKHELIGDVRGLGLMI-GVDLVKDRETKER---AYEETKKVVWRAF-ELGLIVTFF----QGNVLRIEPPLTIEEE 411 (443)
T ss_pred HHHHHHCCCEEEECCCCEEE-EEEEECCCCCCCC---CHHHHHHHHHHHH-HCCCEEEEC----CCCEEEEECCCCCCHH
T ss_conf 99887189888520364699-9998127765544---5799999999999-689388116----9998999799128999
Q ss_pred HHHHHHHHHHHHHHHCC
Q ss_conf 99999999999998609
Q gi|254780602|r 384 ILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 384 ~l~~al~rl~~~l~~l~ 400 (400)
++++++++|.+.|+.++
T Consensus 412 eid~~~~~l~~al~ev~ 428 (443)
T PRK08360 412 VLDEGLDILEEAIEDVE 428 (443)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999998
No 219
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=99.53 E-value=8.7e-14 Score=104.04 Aligned_cols=327 Identities=13% Similarity=0.148 Sum_probs=204.9
Q ss_pred HCC--CCEEECCCCC-CCCCCCHHHHHHHHHHHHCCCCCCCC------CC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 869--9726656589-74988999999999998388756998------77-89899999999864210133332233233
Q gi|254780602|r 28 SKG--IDVLCLTAGE-PDFDMPENVKYAVVRAMERGETKYTA------VA-GISPLREAIVEKFRRDNDLHYTSDQIIVG 97 (400)
Q Consensus 28 ~~g--~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~~~~Y~~------~~-G~~~lR~aia~~~~~~~g~~~~~e~I~it 97 (400)
.+| ..||||...| -.+.-+|.|++|.++++++--+|-.+ +| =+.+|-+.||+|+.. +|-|+.
T Consensus 35 ~dGv~~~vlNfCANNYLGLs~HP~~I~AA~~Al~~~GfGlsSVRFICGTQd~HK~LE~~iA~F~~~-------EDtILY- 106 (395)
T TIGR01822 35 ADGVSREVLNFCANNYLGLSDHPDVIQAAKDALDEHGFGLSSVRFICGTQDLHKELEAKIAAFLGT-------EDTILY- 106 (395)
T ss_pred ECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHCC-------CCHHHH-
T ss_conf 558642314431000056467557999999988743895134321216743568999999997165-------304454-
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC----CCCCEEE
Q ss_conf 45433332222222332232222333323222222---2222222222222223222103331000122----1220121
Q gi|254780602|r 98 TGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMV---ALCGGIPVFVDTQQDDNFQVSPEKLEQAITP----KTKWLFL 170 (400)
Q Consensus 98 ~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~---~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~----~~k~i~l 170 (400)
+.+-.|..=+|-.++.+.|-||=-. -+|.+++ ++|-++-+.|. + .|+++|++.+++ ..|..++
T Consensus 107 ~scFDANgGlFE~LLg~eDAiiSDa---LNHASIIDGvRLCKAkrYRY~----~---~dm~dLe~~L~~A~~~Gar~~Li 176 (395)
T TIGR01822 107 ASCFDANGGLFETLLGEEDAIISDA---LNHASIIDGVRLCKAKRYRYA----N---NDMADLEAQLKEAQAAGARHRLI 176 (395)
T ss_pred HHHHHCCCCCCHHHCCCCCCCHHHH---HCCCHHHHHHHHHHHHHHHHH----C---CCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 5666305542201047544221022---243102300354223343230----5---88889999999999738958998
Q ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 135421000012----3333211122333332011101221100000122332221112333225741465443223445
Q gi|254780602|r 171 NSPSNPSGVVYS----QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 171 ~nP~NPTG~v~s----~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
.+ -| |+| -..|++|+.+| ++||.+|..||+|+ .-|=|..-.....+..-+....|+.+|+.|.+| |-
T Consensus 177 ~t----DG-vFSMDG~iA~L~~i~~LA-~~Y~ALv~~DecHA-~GflG~~GRG~~E~~gv~g~vdI~tgTLGKAlG--GA 247 (395)
T TIGR01822 177 AT----DG-VFSMDGTIAPLDEICDLA-DKYDALVMVDECHA-TGFLGATGRGTAELLGVMGRVDIITGTLGKALG--GA 247 (395)
T ss_pred EE----CC-EEECCCCEECHHHHHHHH-HHCCCEEEEECCCC-CCCCCCCCCCHHHHCCCCCCEEEEECCHHHHHC--CC
T ss_conf 64----66-020687310767899999-85598788744334-233278998614213767525774054334511--45
Q ss_pred CCCCCCCHHHHHHHHHHH-CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCE
Q ss_conf 444221101226875310-01222332222222-2222234676432222221100000002455304776033027408
Q gi|254780602|r 247 RIGYAAGALSLIKSMIVL-QGQQTSGACSIAQW-AAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAF 324 (400)
Q Consensus 247 RiG~~v~~~~li~~l~~~-~~~~~~~~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~ 324 (400)
--||-.+++++++-|+.. +-|..++.-+|.-. +.+++|+-- +-=.++++.+.+|-+++.+.|... |+++.+.+-..
T Consensus 248 ~GGfTta~~evv~lLRQRsRPYLFSNslpP~vvga~~~vl~~l-~~s~~l~~~L~~n~~~FR~~m~Aa-GFd~~p~~hpI 325 (395)
T TIGR01822 248 SGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLDML-EGSNELRDRLAENTRYFRERMEAA-GFDVKPAEHPI 325 (395)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHH-HCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCC
T ss_conf 6764377467999853126511000463068999999999998-420579999999999878753424-74017898851
Q ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCCE--EEEEE--ECCHHHHHHHHHHHHHHHH
Q ss_conf 998626410233211332248989999999987397998350228--9972--89996--2999999999999999998
Q gi|254780602|r 325 YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGPS--IRISY--AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 325 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~--iRis~--~~~~e~l~~al~rl~~~l~ 397 (400)
++ .+..+. ..+.+|+++||++ ||.|+ |-.|- ++|- ||+=+ +-++|.|++|++.+.+.=+
T Consensus 326 -----~p------vMlyDA-~~Aq~~A~~Ll~~-GiYv~-GFfYPVVPKGqARIRvQ~SA~H~~e~l~~a~~AF~~~G~ 390 (395)
T TIGR01822 326 -----IP------VMLYDA-KLAQRFAERLLEE-GIYVI-GFFYPVVPKGQARIRVQISAVHTEEQLDRAVEAFTRVGR 390 (395)
T ss_pred -----EE------EECCCH-HHHHHHHHHHHHC-CEEEE-EEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf -----02------321147-8999999999877-92899-745264378861244410256898899999999999878
No 220
>PRK07323 consensus
Probab=99.53 E-value=1.5e-13 Score=102.53 Aligned_cols=345 Identities=14% Similarity=0.124 Sum_probs=181.0
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|- ..+. -+|.|.+|+++.++...+ ++...-..+.+..+|+.+.+....+-...+|.+++++++|..
T Consensus 56 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~q~~~l~~-~~~~~~~~~~~~~lae~L~~~~~~~~~~~rv~f~~SGsEAvE 134 (443)
T PRK07323 56 DGNVFLDFTAGIAVTTTGHAHPHVVRAVQEQAERFAH-VCGTDFYYEPTTSLAERLVGHAPFPGEKWRVFFGNSGAESVE 134 (443)
T ss_pred CCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHH
T ss_conf 8899999250877443168989999999999975556-554655778999999999984789766568998377468999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCC-CCCCCCC---------------CCCCCCCC--C------CCCCCCHHHHHHC
Q ss_conf 222222-3322-322223333232222-2222222---------------22222222--2------2322210333100
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPD-MVALCGG---------------IPVFVDTQ--Q------DDNFQVSPEKLEQ 159 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~-~~~~~g~---------------~~~~v~~~--~------~~~~~~d~~~l~~ 159 (400)
.++... ...| ..|+...-+|-.... .....|. ..++.|.. . +....-..+.+++
T Consensus 135 ~AiklAr~~tgr~~iis~~~~yHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~le~ 214 (443)
T PRK07323 135 AAIKLARYHTGRSHIIAFLGAFHGRTYGAMSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGSTPEECGHAVLDHLES 214 (443)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999998469987999707878987642431288300013568889990670687632343468726789999999999
Q ss_pred CCC-----CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEE
Q ss_conf 012-----21220121135-4210000-12333321112233333201110122110000012233-2221112333225
Q gi|254780602|r 160 AIT-----PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERT 231 (400)
Q Consensus 160 ~i~-----~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~ 231 (400)
.+. +++.++++ -| +--.|.+ .+++-++++-++| +++|+++|.||+...+.=.|.-+. .-..+.|+
T Consensus 215 ~~~~~~~~~~iAAvi~-EPiqg~gG~~~pp~~yl~~lr~lc-~~~~illI~DEV~tGfGRtG~~fa~e~~gv~PD----- 287 (443)
T PRK07323 215 LFQTVLPAEEVAAIVV-EPIQGEGGYIVPPDGFLPRLRAIC-DRHGILLVVDEVQAGMGRTGRLFAIEHWGVQPD----- 287 (443)
T ss_pred HHHHHCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCC-----
T ss_conf 9985178997899998-687788898569989999999999-984975886742327886664302014697888-----
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 74146544322344544422110122687531001222332222222222223467643222222110000000245530
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQG 311 (400)
Q Consensus 232 i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~ 311 (400)
|++ ++|.++ .|+-+|.+++.+++.......+.. +.+.+.+...++.+.|+--++ +..+..+++-+++.+.|++
T Consensus 288 iv~--~gKglg-~G~Plsav~~~~~i~~~~~g~h~~-T~~gnpl~~aaa~a~L~iie~---~l~~~v~~~g~~l~~~L~~ 360 (443)
T PRK07323 288 IIT--LAKGIA-SGMPLGAILAREELMTWPPGSHGT-TFGGNPVAAAAAHATLDLLEG---GLMENAARMGEFLLAELRQ 360 (443)
T ss_pred EEE--ECHHHC-CCCCEEEEEECHHHHCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_conf 898--713432-887318999857861365677653-658974899999999999987---7999999999999999999
Q ss_pred C----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHH
Q ss_conf 4----77603302740899862641023321133224898999999998739799835022899728999--62999999
Q gi|254780602|r 312 V----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAIL 385 (400)
Q Consensus 312 ~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l 385 (400)
+ |-+.-++..| +++=+++-+....... .-...++..+ .++|+++.|+. ++.||++ +..+++++
T Consensus 361 l~~~~p~v~~vRG~G-L~~giel~~~~~~~~~-----~~~~~i~~~~-~~~Gll~~~~g----~~~ir~~PPL~is~~ei 429 (443)
T PRK07323 361 LQDRFPFLGDVRGRG-LMIGLDFVDPDGNPDG-----DLRDRAVRLA-FEKGLLLLGCG----KAAIRICPPLVLTREEA 429 (443)
T ss_pred HHHHCCCEEEEECCC-EEEEEEEECCCCCCCH-----HHHHHHHHHH-HHCCEEEEECC----CCEEEEECCEECCHHHH
T ss_conf 886099799873156-3999999548888488-----9999999999-97997998369----99899978910889999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999860
Q gi|254780602|r 386 EEACVRIKRFCHSL 399 (400)
Q Consensus 386 ~~al~rl~~~l~~l 399 (400)
++++++|++.+++|
T Consensus 430 d~~l~~l~~al~el 443 (443)
T PRK07323 430 ATGLDILREVFREL 443 (443)
T ss_pred HHHHHHHHHHHHHC
T ss_conf 99999999999849
No 221
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.52 E-value=6.4e-13 Score=98.75 Aligned_cols=345 Identities=15% Similarity=0.102 Sum_probs=197.4
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCC------CCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999998699726656589749889999999999983887-5699------87789899999999864210133
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYT------AVAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~------~~~G~~~lR~aia~~~~~~~g~~ 88 (400)
++++.++-.+.++.+ |+|-..+. + +++.+++++...+.+.. -||+ ......++-....++.++.|+.+
T Consensus 7 i~~~i~~E~~rq~~~---l~LIaSEN-~-~S~~v~~a~gS~ltnkYaeG~pg~Ryy~G~~~iD~iE~la~~rak~LF~a~ 81 (402)
T cd00378 7 IAEIIKKENERQRET---LELIASEN-F-TSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE 81 (402)
T ss_pred HHHHHHHHHHHHHHC---CEEECCCC-C-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999809---64755766-4-799999985673015476889986466766259999999999999983898
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CCCCCCC--CCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 332233233454333322222223322322223333232222-----2222222--222222222232221033310001
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD-----MVALCGG--IPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~-----~~~~~g~--~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
--||=+.+|+ +|...++.++++|||+|+..++.-..|.. .+...|. ..+++.+++++ +.+|.|++++..
T Consensus 82 --~anVqp~SGs-~AN~av~~all~pGD~il~l~l~~GGHltHg~~~~v~~~g~~~~~~~Y~vd~~~-~~IDyd~~~~~a 157 (402)
T cd00378 82 --YANVQPHSGS-QANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPET-GLIDYDALEKMA 157 (402)
T ss_pred --CCCCCCCCHH-HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCC-CCCCHHHHHHHH
T ss_conf --7475878739-999999999727999899866434777566778772021356788963245565-871899999999
Q ss_pred -CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf -22122012113542100001233-332111223333320111012211-000001223322211123332257414654
Q gi|254780602|r 162 -TPKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVNVEPSLYERTLVVNGVS 238 (400)
Q Consensus 162 -~~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~~~~~~~~~~i~~~S~S 238 (400)
..|+|+|++- ++.|++. +++++.++| ++.+.+++.|-+|- .|+-.+ .+++... .. -++.+|.-
T Consensus 158 ~~~kPklIi~G------~S~y~r~~d~~~~reIa-d~vgA~l~~D~aHi~GLIA~g-~~p~Pl~---~A---Dvvt~tTH 223 (402)
T cd00378 158 LEFKPKLIVAG------ASAYPRPIDFKRFREIA-DEVGAYLLVDMAHVAGLVAGG-VFPNPLP---GA---DVVTTTTH 223 (402)
T ss_pred HHCCCCEEEEC------CCCCCCCCCHHHHHHHH-HHCCCEEEEEHHHHHHHEECC-CCCCCCC---CC---EEEECCCC
T ss_conf 86599699977------71565655889999999-870988985501234430356-5799768---76---57744643
Q ss_pred CCCCCCCCCCCCCCCHH-HHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 43223445444221101-226875310012223322222222222-2346-76432222221100000002455304776
Q gi|254780602|r 239 KAYAMTGLRIGYAAGAL-SLIKSMIVLQGQQTSGACSIAQWAAVE-ALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 239 K~~~~~G~RiG~~v~~~-~li~~l~~~~~~~~~~~~~~~q~a~~~-~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~ 315 (400)
|+| +|-|-|.+..++ ++.+++.+..--...+.+...+.++.+ +|.+ .+.....-.+...+|.+.+.+.|.+. |+
T Consensus 224 KTl--rGPrGGiIl~~~~~~~~kId~avfPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAkaLA~~L~~~-G~ 300 (402)
T cd00378 224 KTL--RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GF 300 (402)
T ss_pred CCC--CCCCCEEEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 457--899840899542789988546509864467456678999999999868668999999999999999999858-94
Q ss_pred EEEEC-CCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCCCCC--CCCEEEEEE------ECCH
Q ss_conf 03302-7408998626410233211332248989999999987397998----350228--997289996------2999
Q gi|254780602|r 316 RYMIP-DGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV----QGSSFG--HGPSIRISY------AVSD 382 (400)
Q Consensus 316 ~~~~p-~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~----pG~~Fg--~~~~iRis~------~~~~ 382 (400)
++... ..+-.+|+|+... ..+..+ +..+|++.||.+. |+..-. .+..|||.- +-.+
T Consensus 301 ~vv~ggTd~H~vlvd~~~~----------g~~G~~-a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~~e 369 (402)
T cd00378 301 KVVSGGTDNHLVLVDLRPK----------GITGKA-AEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGE 369 (402)
T ss_pred EEECCCCCCCEEEEECCCC----------CCCHHH-HHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCH
T ss_conf 7974899887799966645----------689999-99999984908754748899999999976164778998589988
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999999998
Q gi|254780602|r 383 AILEEACVRIKRFCH 397 (400)
Q Consensus 383 e~l~~al~rl~~~l~ 397 (400)
+++++-.+-|.+.++
T Consensus 370 ~em~~ia~lI~~~l~ 384 (402)
T cd00378 370 EEMEEIADFIARALK 384 (402)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999981
No 222
>PRK06105 aminotransferase; Provisional
Probab=99.52 E-value=4.5e-13 Score=99.66 Aligned_cols=348 Identities=13% Similarity=0.077 Sum_probs=175.2
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..||+..|.- .+. -+|.|.+|+++.++...+-........+.+..+|+.+.+... ..-++|.++++++++..
T Consensus 46 dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p--~~l~~v~f~~sGSEAvE 123 (460)
T PRK06105 46 AGKRYIEGMAGLWSVAVGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGSEAND 123 (460)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf 9999999762387510267999999999999965786012587678899999999997378--88487998377088999
Q ss_pred CCCCCC-------CCCCC-CCCCCCCCCCCCCCC-CCCCC--------------CCCCCCCCC----C----CCCCC-CH
Q ss_conf 222222-------33223-222233332322222-22222--------------222222222----2----23222-10
Q gi|254780602|r 106 NALMAT-------VNMGD-EVLIPRPYWVSYPDM-VALCG--------------GIPVFVDTQ----Q----DDNFQ-VS 153 (400)
Q Consensus 106 ~~~~~~-------~~~Gd-~Vlv~~P~y~~y~~~-~~~~g--------------~~~~~v~~~----~----~~~~~-~d 153 (400)
.++... ..+|. +|+...-+|-.-... ....| ...+..|-. . +..|. -.
T Consensus 124 ~AlKlA~~y~~a~g~~~r~~iis~~~syHG~T~ga~s~tg~~~~~~~~~~~~~~~~~~~~P~~~r~~~~~~~~~~~~~~~ 203 (460)
T PRK06105 124 TVVKLIWYYNNALGRPEKKKIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDRILHTGCPHYYRFGLPGESEEAFATRL 203 (460)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999638988636997237636650445542089533556689988804467884346688887889999999
Q ss_pred HHHHHCCCCC----CCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3331000122----1220121135-4210000-12333321112233333201110122110000012233-22211123
Q gi|254780602|r 154 PEKLEQAITP----KTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~~----~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
.+++++.+.. ++-+++ .-| +.-.|.+ .+++.++++.++| +++|+++|.||++..+.=.|.-+. .-..+.|+
T Consensus 204 ~~~le~~i~~~~~~~iAavI-vEPiqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 281 (460)
T PRK06105 204 ANELEALILAEGPDTIAAFI-GEPVMGAGGVIVPPKTYWEKIQAVL-RKYDILLVADEVICGFGRTGNMFGCETFGIKPD 281 (460)
T ss_pred HHHHHHHHHHHCCCCEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 99999999851988567998-3672488887269868989999999-856977993354117873337612205873787
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 3322574146544322344-544422110122687531001-------22233222222222222346--7643222222
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQG-------QQTSGACSIAQWAAVEALNG--PQDFVVNNRK 296 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~ 296 (400)
|+ +++|..+ .| +-+|.+++.+++.+.+..... ..+.+.+.+...++.+.|+. .++.+++.
T Consensus 282 -----iv--~~gKglg-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaala~L~~i~~~~l~~~~-- 351 (460)
T PRK06105 282 -----IL--VLSKQLT-SSYQPLSAVLINERVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNA-- 351 (460)
T ss_pred -----EE--EEECCCC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH--
T ss_conf -----45--6611235-7877504884238898765036666666532568999989999999999999864899999--
Q ss_pred CCCCCCCCHHHHHHC---CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCE
Q ss_conf 110000000245530---47760330274089986264102332113322489899999999873979983502289972
Q gi|254780602|r 297 IFEYRRDLCVAQLQG---VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPS 373 (400)
Q Consensus 297 ~~~~~r~~~~~~L~~---~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~ 373 (400)
++.-+++.+.|++ .+.+.-++..| +++=+++-.......+..........+... +.++||++.|. .+.
T Consensus 352 --~~~g~~l~~~L~~l~~~p~i~~VRG~G-l~~gielv~~~~~~~~~~~~~~~~~~v~~~-~~~~Gll~~~~-----gn~ 422 (460)
T PRK06105 352 --AELGARFQDRLRALADHPLVGEVRGVG-LIAAVELVADKATKTPFDPPGAVGARANAR-AHEHGVISRAM-----GDT 422 (460)
T ss_pred --HHHHHHHHHHHHHHHCCCCEEEEECCC-EEEEEEEECCCCCCCCCCCCHHHHHHHHHH-HHHCCCEEEEC-----CCE
T ss_conf --999999999999862699768885167-399999851654455677207999999999-99789689306-----998
Q ss_pred EEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8999--6299999999999999999860
Q gi|254780602|r 374 IRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 374 iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|||+ +..+++++++++++|.+.|+..
T Consensus 423 i~i~PPL~it~~eid~~~~~l~~aL~e~ 450 (460)
T PRK06105 423 LAFCPPLIITAAQVDEMVDRFGRALDDT 450 (460)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9997992488999999999999999999
No 223
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.52 E-value=5e-13 Score=99.39 Aligned_cols=337 Identities=14% Similarity=0.116 Sum_probs=176.1
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|. ..+. -+|.|.+|+++.++.-. +.......+.+..+|+.+.+... ..+.|.+++++++|.
T Consensus 37 ~dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~lae~L~~~~~---~~~~v~f~~SGsEAv 111 (408)
T PRK04612 37 DQGREYLDLSSGIAVSGLGHNDPDLVAALTEQAGKLW--HTSNVFFSAPPLKLAEELVTASR---FAEKVFLCNSGTEAN 111 (408)
T ss_pred CCCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCHHHHHHHHHHHHCCC---CCCEEEECCCHHHHH
T ss_conf 9889999924507751225898999999999986525--76675226589999999972268---876699718746899
Q ss_pred CCCCCCCC-------CCC--CCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCC--CHHHHHHCCCCC-CCCCE
Q ss_conf 22222223-------322--32222333323222222222222222----2222223222--103331000122-12201
Q gi|254780602|r 105 FNALMATV-------NMG--DEVLIPRPYWVSYPDMVALCGGIPVF----VDTQQDDNFQ--VSPEKLEQAITP-KTKWL 168 (400)
Q Consensus 105 ~~~~~~~~-------~~G--d~Vlv~~P~y~~y~~~~~~~g~~~~~----v~~~~~~~~~--~d~~~l~~~i~~-~~k~i 168 (400)
..+++..- .+. ..|+...-+|-.....+......+.. .|+...-.+. -|.+.+++.+.. ++-++
T Consensus 112 E~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~~~le~~~~~~~iAAv 191 (408)
T PRK04612 112 EAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDVAAV 191 (408)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHCCCCCEEEE
T ss_conf 99999999998732887777699998585259876742256784334688899885254366749999971569978999
Q ss_pred EECCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 211354-2100001-23333211122333332011101221100000122332-22111233322574146544322344
Q gi|254780602|r 169 FLNSPS-NPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 169 ~l~nP~-NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
++ -|= .-.|.+. +++-+++|.++| +++|+++|.||+...+.=.|.-+.. -..+.|+ |+ .++|..+ .|
T Consensus 192 iv-EPi~g~gG~~~~~~~yl~~l~~lc-~~~gillI~DEV~TGfGRtG~~fa~~~~~v~PD-----ii--~~gKglg-~G 261 (408)
T PRK04612 192 ML-EPIQGEGGVMPAAPGFLARVRALC-DQHDALLVLDEIQCGMGRTGTLFAHWQEQVTPD-----IV--TLAKALG-GG 261 (408)
T ss_pred EE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEECCCCCCCCCCHHHHHHCCCCCC-----EE--EEEHHHC-CC
T ss_conf 99-786788883068999999999999-756946985012247886762035551289999-----89--9723223-88
Q ss_pred CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEE
Q ss_conf 544422110122687531001222332222222222223467--6432222221100000002455304----7760330
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMI 319 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~ 319 (400)
+.+|.+++.+++.+.+..-....+.+.+.+...++.+.|+.- ++.+++ .+++-+++.+.|+++ +-+.=++
T Consensus 262 ~Pl~av~~~~~i~~~~~~~~h~~T~~gnpla~aaala~L~~i~~~~l~~~----~~~~g~~l~~~L~~l~~~~~~i~~vR 337 (408)
T PRK04612 262 FPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAAN----VARQSAALRAGLEALNAEFGVFAQIR 337 (408)
T ss_pred CCEEEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 76289998688885146899788887359999999999999986669999----99999999999999874079888322
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022899728999--62999999999999999998
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~ 397 (400)
.. |+++=+.+.. ........+...+ .++|+++.++. ++-||++ +..+++++++++++|++.|.
T Consensus 338 G~-GLm~giel~~---------~~~~~~~~i~~~~-~~~Gll~~~~g----~~~irl~PPL~it~~eide~l~~l~~al~ 402 (408)
T PRK04612 338 GR-GLMLGAVLAP---------AHAGQAGAILDLA-AEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA 402 (408)
T ss_pred CC-CEEEEEEECC---------CCCCHHHHHHHHH-HHCCCEEECCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 04-4699999547---------8862699999999-97891993179----99799968833889999999999999999
Q ss_pred H
Q ss_conf 6
Q gi|254780602|r 398 S 398 (400)
Q Consensus 398 ~ 398 (400)
.
T Consensus 403 ~ 403 (408)
T PRK04612 403 A 403 (408)
T ss_pred H
T ss_conf 9
No 224
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=3.9e-13 Score=100.05 Aligned_cols=346 Identities=11% Similarity=0.091 Sum_probs=178.6
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-89999999999983887569987789-8999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..|- ..+. -+|.|.+|+++.++.-. |....|. .+.+..+|+.+..... -.-+.|.+++++++|.
T Consensus 56 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~~LAe~L~~~~p--~~~~~v~f~~SGseA~ 131 (462)
T PRK06916 56 NGNEYWDGVSSIWLNVHGHRVPELDEAIREQLNKIA--HSTMLGLANVPSILLAEKLIEVVP--EGLKKVFYSDSGSSAV 131 (462)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHH
T ss_conf 999998846337740356896999999999986656--856777677889999999998577--5548799549749999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCCC--------------CCCCCCCCCCCCCCC--------H
Q ss_conf 2222222-------3322-3222233332322222-222222--------------222222222232221--------0
Q gi|254780602|r 105 FNALMAT-------VNMG-DEVLIPRPYWVSYPDM-VALCGG--------------IPVFVDTQQDDNFQV--------S 153 (400)
Q Consensus 105 ~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~-~~~~g~--------------~~~~v~~~~~~~~~~--------d 153 (400)
..++..- ..++ ..||...-+|-.-... ....|. ...++|......+.. +
T Consensus 132 E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~ 211 (462)
T PRK06916 132 EIAIKMAFQYWQHKGKPKKQRFVTLKEAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKEEIVKKH 211 (462)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999982888763799836885877520010467411357777878884676899755676789878999999
Q ss_pred HHHHHCCCCC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3331000122---1220121135--4210000-12333321112233333201110122110000012233-22211123
Q gi|254780602|r 154 PEKLEQAITP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
++++++.+.. ++.++++- | ++-.|.+ .+++-+++|.++| +++|+++|.||+...+.=.|.-+. .-..+.|+
T Consensus 212 ~~~le~~i~~~~~~iAaviiE-P~iqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD 289 (462)
T PRK06916 212 LEEMEELLKEKHEEIAAIIVE-PLMQGAGGMITMPKGYLKGLRNLC-TKYNVLFITDEVATGFGRTGKMFACEHENVTPD 289 (462)
T ss_pred HHHHHHHHHHCCCCEEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCCHHHCCCCCCC
T ss_conf 999999997579976699996-144578996578789999999998-605972672543027875567116642796688
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHH----HC---CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 3322574146544322344-544422110122687531----00---122233222222222222346--7643222222
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIV----LQ---GQQTSGACSIAQWAAVEALNG--PQDFVVNNRK 296 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~----~~---~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~ 296 (400)
|+ +++|..+ .| +-+|.+++.+++.+.+.. .. ...+.+.+.+...++.+.|+. .+..+++.+
T Consensus 290 -----iv--~~gKgl~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~GnPla~Aaa~a~L~~i~~e~l~~~v~- 360 (462)
T PRK06916 290 -----IL--TAGKGLT-GGYLPIAITVTTDEIYNAFLGDYEEQKTFFHGHSYTGNPLGCAVAIANLELYEKTNLIEQVA- 360 (462)
T ss_pred -----HH--HHCHHCC-CCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH-
T ss_conf -----34--3121103-78776279976189887531665456665567778888799999999999999668899999-
Q ss_pred CCCCCCCCHHHHHH---CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCE
Q ss_conf 11000000024553---047760330274089986264102332113322489899999999873979983502289972
Q gi|254780602|r 297 IFEYRRDLCVAQLQ---GVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPS 373 (400)
Q Consensus 297 ~~~~~r~~~~~~L~---~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~ 373 (400)
++-+++.+.|+ +.+.+.-++..| +++=+++-+......+......-..+++..+ .+.|+++.|. .+.
T Consensus 361 ---~~g~~l~~~L~~l~~~~~v~dVRG~G-l~~gielv~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~~~-----gn~ 430 (462)
T PRK06916 361 ---RKTEYVATQLEDLFALKHVGDIRQLG-LMVGIELVKNKETKEPFPWTERVGVQVCKRS-RELGMILRPL-----GNT 430 (462)
T ss_pred ---HHHHHHHHHHHHHHCCCCEEEEECCC-CEEEEEEECCCCCCCCCCHHHHHHHHHHHHH-HHCCEEEEEC-----CCE
T ss_conf ---99999999999862699858772477-1899998326654677855789999999999-9699499744-----999
Q ss_pred EEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8999--6299999999999999999860
Q gi|254780602|r 374 IRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 374 iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+|++ +..+++++++++++|++.|+.+
T Consensus 431 i~~~PPL~it~~eid~~~~il~~al~ev 458 (462)
T PRK06916 431 IVFMPPLASTIDELDEMLRILYKAISDV 458 (462)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9998993488999999999999999999
No 225
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.51 E-value=2.4e-13 Score=101.29 Aligned_cols=344 Identities=15% Similarity=0.147 Sum_probs=180.3
Q ss_pred CCCCEEECCCCCC----CCCCCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897----498899999999999838875-69987789899999999864210133332233233454333
Q gi|254780602|r 29 KGIDVLCLTAGEP----DFDMPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 29 ~g~~ii~l~~G~p----~~~~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
+|+..||+..|-- .+. .|.|.+|+++.++...+ .|.... .+.+.++|+.+......+ ..+.+++++++++|
T Consensus 38 dG~~ylD~~sg~~~~~lGh~-~p~i~~Ai~~Ql~~l~~~~~~~~~--~~~~~~lae~l~~~~p~~-g~~~v~f~~SGSEA 113 (421)
T PRK06777 38 EGREYIDFAAGIAVLNTGHR-HPKVMAAVRQQLDQFTHTAYQIVP--YASYVTLAERINSLAPIS-GNSKTAFFTTGAEA 113 (421)
T ss_pred CCCEEEEECCCHHHHHHCCC-CHHHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHHHHHHHCCCC-CCCEEEEECCHHHH
T ss_conf 87999893533875202479-899999999998613574554556--669999999999747766-76449996782789
Q ss_pred CCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC-CCCC--------CCCCCCC----CCCCCCCCH----HHHHHCCCC--
Q ss_conf 322222223--322322223333232222222-2222--------2222222----222322210----333100012--
Q gi|254780602|r 104 IFNALMATV--NMGDEVLIPRPYWVSYPDMVA-LCGG--------IPVFVDT----QQDDNFQVS----PEKLEQAIT-- 162 (400)
Q Consensus 104 l~~~~~~~~--~~Gd~Vlv~~P~y~~y~~~~~-~~g~--------~~~~v~~----~~~~~~~~d----~~~l~~~i~-- 162 (400)
...++...- .....|+...-+|-.....+. ..|- .+.+-.. .++..+... ++.+++.+.
T Consensus 114 ve~AiKlAr~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 193 (421)
T PRK06777 114 VENAVKIARAATGRPGVIAFSGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELYGVSVEEAISSVERLFRCD 193 (421)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 99999999986399963775787699634330015887754467789998602236897224656899999999999750
Q ss_pred ---CCCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECC
Q ss_conf ---21220121135-421000-012333321112233333201110122110000012233-222111233322574146
Q gi|254780602|r 163 ---PKTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNG 236 (400)
Q Consensus 163 ---~~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S 236 (400)
+++-++++ -| +.-.|. +.+++-++++-++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+ +
T Consensus 194 ~~~~~iAAvi~-EPiqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv--~ 264 (421)
T PRK06777 194 ISPTQVAAILL-EPIQGEGGFNIAPPEFVSALRTLC-DEHGILLIADEVQTGFARTGKLFAMEYYDTKVD-----LI--T 264 (421)
T ss_pred CCCCCEEEEEE-ECCCCCCCCEECCHHHHHHHHHHH-HHCCCEEEECCCEECCCCCCCCCHHHCCCCCCC-----EE--E
T ss_conf 58885899998-354378886409999999999999-983977971121106775678434315877797-----88--7
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHC---
Q ss_conf 544322344544422110122687531001222332222222222223467--643222222110000000245530---
Q gi|254780602|r 237 VSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQG--- 311 (400)
Q Consensus 237 ~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~--- 311 (400)
++|.++ .|+-+|.+++.+++++.........+.+.+.+...++.+.|+.- ++.++ .-++.-+++.+.|++
T Consensus 265 ~gKgl~-gG~P~~av~~~~~i~~~~~~~~~~~Tf~G~pl~caaa~a~L~~i~~~~l~~----~~~~~g~~l~~~L~~l~~ 339 (421)
T PRK06777 265 MAKSLG-GGMPISAVTGRADVMDAPLPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCE----RALILGAKLVEVLEKAQM 339 (421)
T ss_pred ECCCCC-CCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHH
T ss_conf 440025-876507898627875257887637889989899999999999998635999----999999999999999885
Q ss_pred -CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHH
Q ss_conf -477603302740899862641023321133224898999999998739799835022899728999--62999999999
Q gi|254780602|r 312 -VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEA 388 (400)
Q Consensus 312 -~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~a 388 (400)
.|.+.=++.. |+++=+++.+... ..+.. .....+..+++ +.|+++.++..+ ++-|||. +..++++++++
T Consensus 340 ~~p~v~dVRG~-GL~~gie~~d~~~-~~~~~---~~~~~i~~~~~-~~Glll~~~g~~--~nvir~~PPL~it~~eid~~ 411 (421)
T PRK06777 340 SNAAIVGIRAR-GSMVAVEFNDPVT-GKPSP---ELTRAYQRQAL-EEGLLLLSCGVH--GNVIRFLYPLTIPDKQFKKA 411 (421)
T ss_pred HCCCEEEEECC-EEEEEEEECCCCC-CCCCH---HHHHHHHHHHH-HCCCEEEECCCC--CCEEEEECCCCCCHHHHHHH
T ss_conf 58988986236-4899999716877-89589---99999999999-789889845899--99899979954789999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999986
Q gi|254780602|r 389 CVRIKRFCHS 398 (400)
Q Consensus 389 l~rl~~~l~~ 398 (400)
++.|++.|.+
T Consensus 412 ~~il~~aL~s 421 (421)
T PRK06777 412 MNILTRLLAS 421 (421)
T ss_pred HHHHHHHHCC
T ss_conf 9999999749
No 226
>PRK07036 hypothetical protein; Provisional
Probab=99.51 E-value=3.1e-13 Score=100.71 Aligned_cols=345 Identities=14% Similarity=0.142 Sum_probs=177.7
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-8999999999998388756998778-9899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|++.||+..|-- .+. -+|.|.+|+++.+++..+ +.+..+ ..+.+..+|+.+..... -..+.|++++++++|
T Consensus 48 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsEA 124 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNIGYGREEMADAIADQARRLPY-YTPFGDMTNAPAAELAAKLAELAP--GDLNHVFLTTGGSTA 124 (466)
T ss_pred CCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHH
T ss_conf 99999999653478502178979999999999976786-067643268999999999997488--775879983773889
Q ss_pred CCCCCCCC-------CCCC-CCCCCCCCCCCCCCCCC-CCCCC--------------CCCCCC--CC-CCC----CC-CC
Q ss_conf 32222222-------3322-32222333323222222-22222--------------222222--22-223----22-21
Q gi|254780602|r 104 IFNALMAT-------VNMG-DEVLIPRPYWVSYPDMV-ALCGG--------------IPVFVD--TQ-QDD----NF-QV 152 (400)
Q Consensus 104 l~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~~-~~~g~--------------~~~~v~--~~-~~~----~~-~~ 152 (400)
...++..- -.++ ..|+...-+|-.-...+ ...|. ..+..| .. +.+ .| ..
T Consensus 125 ~E~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~T~~a~s~sg~~~~~~~~~~~~~~v~~~~~p~~~~~p~~~~~~~~~~~ 204 (466)
T PRK07036 125 VDSALRFVHYYFNCRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDF 204 (466)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999875088876089834897689656562205884456787788875043257765557766523678999
Q ss_pred HHHHHHCCCC----CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 0333100012----21220121135-4210000-123333211122333332011101221100000122332--22111
Q gi|254780602|r 153 SPEKLEQAIT----PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN--IVNVE 224 (400)
Q Consensus 153 d~~~l~~~i~----~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s--~~~~~ 224 (400)
-.+++++.+. +++.+++ .-| ..=.|.+ .+++.+++|.++| +++|+++|.||+...+.=.|.-+.+ ...+.
T Consensus 205 ~~~~~e~~i~~~~~~~iAa~i-~EPi~G~gG~~~pp~~yl~~lr~lc-~~~gillI~DEV~tG~GRtG~~fa~~~~~gv~ 282 (466)
T PRK07036 205 LVDEFEDKILELGADNIAAFI-AEPILGSGGVIVPPPGYHARMREIC-RRYDILYISDEVVTGFGRLGHFFASEAVFGIQ 282 (466)
T ss_pred HHHHHHHHHHHCCCCCEEEEE-ECCCCCCCCEECCCHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCCCHHHHHHHCCC
T ss_conf 999999999861888668998-5662166871308889999999998-63790799745642888675520435863889
Q ss_pred CCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC------CC-CCCCCCCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 233322574146544322344-54442211012268753100------12-22332222222222223467--6432222
Q gi|254780602|r 225 PSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ------GQ-QTSGACSIAQWAAVEALNGP--QDFVVNN 294 (400)
Q Consensus 225 ~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~------~~-~~~~~~~~~q~a~~~~l~~~--~~~~~~~ 294 (400)
|+ |+ +++|..+ .| +-+|.+++.+++.+.+..-. .+ .+.+.+.+...++.+.|+.- ++.+++.
T Consensus 283 PD-----iv--~~gKgl~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~~e~l~~~~ 354 (466)
T PRK07036 283 PD-----II--TVAKGLT-SGYQPLGAVIISERLVDVISGPNAKGGVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHV 354 (466)
T ss_pred CC-----EE--EECCCCC-CCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 87-----79--8713356-8877648999859999875046788845503678889989999999999998626699999
Q ss_pred CCCCCCCCCCHHH---HHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH---HHHHCCEEEECCCCC
Q ss_conf 2211000000024---5530477603302740899862641023321133224898999999---998739799835022
Q gi|254780602|r 295 RKIFEYRRDLCVA---QLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNG---LLEIEKVAVVQGSSF 368 (400)
Q Consensus 295 ~~~~~~~r~~~~~---~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Ll~~~gV~v~pG~~F 368 (400)
+++-+++.+ .|++.+.+.-++.. |+++-+++-.-.... .....+..+..+ .+.+.||++.|.
T Consensus 355 ----~~~G~~l~~~L~~L~~~p~v~dVRG~-GLm~gie~v~d~~~~----~~~~~~~~~~~~i~~~~~~~Gll~~~~--- 422 (466)
T PRK07036 355 ----REVGPYFEERLASLRELPLVGDVRGD-HLMACVECVADKGSK----ALLPEDIAIGQRIDRHCQERGLLVRPL--- 422 (466)
T ss_pred ----HHHHHHHHHHHHHHHCCCCEEEEEEC-CEEEEEEEECCCCCC----CCCCCCHHHHHHHHHHHHHCCEEEEEC---
T ss_conf ----99999999999975159977888632-389999970266544----457711799999999999699499966---
Q ss_pred CCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 899728999--6299999999999999999860
Q gi|254780602|r 369 GHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 369 g~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
.+.+|++ +..+++++++++++|++.++..
T Consensus 423 --g~~~~l~PPL~it~~eid~~l~~l~~al~ev 453 (466)
T PRK07036 423 --EHLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf --9889998997689999999999999999999
No 227
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.51 E-value=5.5e-13 Score=99.17 Aligned_cols=341 Identities=12% Similarity=0.098 Sum_probs=179.0
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-8999999999998388756998778-9899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
.+|+..||+..|-- .+. -+|.|.+|+++.+++-. |.+..+ ..+.+..+|+.+...... .-+.|.+++++++|
T Consensus 42 ~dG~~ylD~~~g~~~~~lGh~hp~i~~Ai~~q~~~l~--~~~~~~~~~~~~~~lae~L~~~~p~--~l~~v~f~~SGsEA 117 (441)
T PRK13360 42 HDGRRVLDGTAGLWCVNAGHGRDEIVEAVRAQAGELD--YAPTFQMGHPKAFELATRIAEIAPG--GLNHVFFTNSGSES 117 (441)
T ss_pred CCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHH
T ss_conf 9999999965338864007797999999999986558--7346767877999999999985788--86879984878999
Q ss_pred CCCCCCCCC-------CCC-CCCCCCCCCCCCCCC-CCCCCC--------------CCCCCCCCCC-CCC-------CCC
Q ss_conf 322222223-------322-322223333232222-222222--------------2222222222-232-------221
Q gi|254780602|r 104 IFNALMATV-------NMG-DEVLIPRPYWVSYPD-MVALCG--------------GIPVFVDTQQ-DDN-------FQV 152 (400)
Q Consensus 104 l~~~~~~~~-------~~G-d~Vlv~~P~y~~y~~-~~~~~g--------------~~~~~v~~~~-~~~-------~~~ 152 (400)
+..++.... +++ ..|+...-+|-.-.. .....| ...++.+.+. .+. +..
T Consensus 118 ~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~ga~s~sg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 197 (441)
T PRK13360 118 VDTALKIALAYHRARGQGQRTRLIGRERGYHGVGFGGISVGGIAPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGA 197 (441)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999886099872289932786279884655355887544567788998513588764222433457525679
Q ss_pred H-HHHHHCCCC---C-CCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 0-333100012---2-1220121135-421000-012333321112233333201110122110000012233-222111
Q gi|254780602|r 153 S-PEKLEQAIT---P-KTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVE 224 (400)
Q Consensus 153 d-~~~l~~~i~---~-~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~ 224 (400)
+ .+++++.+. + ++-++++ -| +-=.|. +.+++-+++|-++| +++++++|.||+...+.=.|.-+. ....+.
T Consensus 198 ~~~~~le~~~~~~~~~~iAAii~-EPiqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tG~GRTG~~fa~e~~gv~ 275 (441)
T PRK13360 198 ELADELERLVTLHDASTIAAVIV-EPVAGSTGVLIPPKGYLQRLREIC-DKHGILLIFDEVITGFGRLGAPFAAQYFGVT 275 (441)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCCCCEECCCCCC
T ss_conf 99999999998549885799997-776677895238999999999998-6359557720131268623567100168987
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH--------CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 2333225741465443223445444221101226875310--------01222332222222222223467--6432222
Q gi|254780602|r 225 PSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVL--------QGQQTSGACSIAQWAAVEALNGP--QDFVVNN 294 (400)
Q Consensus 225 ~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~--------~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~ 294 (400)
|+ |++ ++|.++-.++-+|.+++.+++.+.+..- +. .+.+.+.+...++.+.|+.- ++.+++
T Consensus 276 PD-----iv~--~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg-~T~~Gnplacaaa~a~L~~i~~e~l~~~- 346 (441)
T PRK13360 276 PD-----LLT--CAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHG-YTYSGHPLACAAALATLDLYEREGLLTR- 346 (441)
T ss_pred CC-----EEE--ECCHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCHHHH-
T ss_conf 87-----899--77232178734322552499997433697555421136-7778898999999999999997488999-
Q ss_pred CCCCCCCCCCHHHHHHCC---CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf 221100000002455304---77603302740899862641023321133224898999999998739799835022899
Q gi|254780602|r 295 RKIFEYRRDLCVAQLQGV---PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG 371 (400)
Q Consensus 295 ~~~~~~~r~~~~~~L~~~---~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~ 371 (400)
.++..+++.+.|+++ +.+.-++.. |+++=+++.... +.......+++.+++ +.||++.++ .
T Consensus 347 ---~~~~g~~l~~~L~~l~~~~~v~~VRG~-Gl~~giel~~~~------~~~~~~~~~~~~~~~-~~Gll~~~~-----g 410 (441)
T PRK13360 347 ---AARLAPYWEDALHSLRDAPHVIDIRNL-GLVGGIELAPRD------GKPGKRAYEVFLKCF-EKGLMIRYT-----G 410 (441)
T ss_pred ---HHHHHHHHHHHHHHHHCCCCEEEECCC-CEEEEEEEECCC------CCHHHHHHHHHHHHH-HCCEEEECC-----C
T ss_conf ---999999999999986249986885155-489999997888------865489999999999-699499317-----9
Q ss_pred CEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 728999--6299999999999999999860
Q gi|254780602|r 372 PSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 372 ~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+.+|++ +..+++++++++++|.+.|+.+
T Consensus 411 n~irl~PPL~it~~eid~~~~~l~~aL~e~ 440 (441)
T PRK13360 411 DILALSPPLIIEEAQIDELFDIVAQALKET 440 (441)
T ss_pred CEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 989998992088999999999999999956
No 228
>PRK07483 hypothetical protein; Provisional
Probab=99.50 E-value=4.5e-13 Score=99.71 Aligned_cols=354 Identities=15% Similarity=0.132 Sum_probs=181.9
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|.- .+. -+|.|.+|+++.++.-.+.++. ....+.++.+|+.+.+... -.-+.+.+++++++|.
T Consensus 27 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~-~~~~~~~~~Lae~L~~~~p--~~~~~v~f~~sGsEAv 103 (443)
T PRK07483 27 STGKRYLDASGGAAVSCLGHSHPRVIAAIKAQIDRLAYAHTS-FFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSEAV 103 (443)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHH
T ss_conf 997999983518897744799799999999998336874457-5577899999999998578--8858799968668899
Q ss_pred CCCCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCC-------CC-----CCC-CC-----CCCC----CCC-C
Q ss_conf 22222223-------3223-2222333323222222-22222-------22-----222-22-----2223----222-1
Q gi|254780602|r 105 FNALMATV-------NMGD-EVLIPRPYWVSYPDMV-ALCGG-------IP-----VFV-DT-----QQDD----NFQ-V 152 (400)
Q Consensus 105 ~~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~~~-~~~g~-------~~-----~~v-~~-----~~~~----~~~-~ 152 (400)
..+++.-- .+|. .|+...-+|-.....+ ...|. .+ ..+ |. ...+ .|. .
T Consensus 104 e~AiklAr~y~~~~g~~~r~~ii~~~~~yHG~t~gals~sg~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 183 (443)
T PRK07483 104 EAALKLARQYFVEKGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRDQRAGETDEAYGQR 183 (443)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999871899872899983788788500110147610158888888884440688754456788887899999
Q ss_pred HHHHHHCCCCC----CCCCEEECCCC-CC-CCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCC
Q ss_conf 03331000122----12201211354-21-0000-12333321112233333201110122110000012233-222111
Q gi|254780602|r 153 SPEKLEQAITP----KTKWLFLNSPS-NP-SGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVE 224 (400)
Q Consensus 153 d~~~l~~~i~~----~~k~i~l~nP~-NP-TG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~ 224 (400)
..+++++.+.. +.-+++ .-|- .- -|.+ .+++.+++|-++| +++|+++|.||+...+.=.|.-+. .-..+.
T Consensus 184 ~~~~le~~i~~~~~~~iAavi-~EPi~g~~gG~~~p~~~fl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~ 261 (443)
T PRK07483 184 LADELEAKILELGPDTVAAFV-AETVVGATAGAVPPVPGYFKRIREVC-DRYGVLLILDEVMCGMGRTGTLFACEEDGVA 261 (443)
T ss_pred HHHHHHHHHHHHCCCCEEEEE-EECCCCCCCCCEECCHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999999860888678999-83430475885448889999999999-8669589996152278854377530004558
Q ss_pred CCCCCEEEEECCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2333225741465443223445-4442211012268753100----1222332222222222223467643222222110
Q gi|254780602|r 225 PSLYERTLVVNGVSKAYAMTGL-RIGYAAGALSLIKSMIVLQ----GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFE 299 (400)
Q Consensus 225 ~~~~~~~i~~~S~SK~~~~~G~-RiG~~v~~~~li~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 299 (400)
|+ ++ +++|.++ .|+ -+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.-++ ++..+..+
T Consensus 262 PD-----iv--~~gKgl~-gG~~Pl~a~~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~ 331 (443)
T PRK07483 262 PD-----LL--TIAKGLG-AGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVR 331 (443)
T ss_pred CC-----CE--EECCCCC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHH
T ss_conf 98-----10--1333224-887732799756899975436875334588888998999999999999986--46999999
Q ss_pred CCCCCHHHHH----HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--CC-CC
Q ss_conf 0000002455----30477603302740899862641023321133224898999999998739799835022--89-97
Q gi|254780602|r 300 YRRDLCVAQL----QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--GH-GP 372 (400)
Q Consensus 300 ~~r~~~~~~L----~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--g~-~~ 372 (400)
++-+++.+.| ++.+.+.-++..| +++=+++-.......+..........+..+ +.+.|+++.|+... |. .+
T Consensus 332 ~~g~~l~~~L~~l~~~~p~I~dVRG~G-Lm~gielv~~~~~~~~~d~~~~~~~~i~~~-~~~~Gll~~~~g~~~~g~~~~ 409 (443)
T PRK07483 332 ARGEQLRARLRERLGQHPHVGDIRGRG-LFVGVELVADRATKAPFDPALKLHARIKRE-AMARGLMVYPMGGTIDGVRGD 409 (443)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEECCE-EEEEEEEECCCCCCCCCCHHHHHHHHHHHH-HHHCCCEEEECCCCCCCCCCC
T ss_conf 999999999999986499778854041-489999732676567777568999999999-997895898777764577699
Q ss_pred EEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 28999--629999999999999999986
Q gi|254780602|r 373 SIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 373 ~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
.|||. +..+++++++++++|.+.|++
T Consensus 410 ~i~l~PPL~it~~eid~~i~~l~~aL~~ 437 (443)
T PRK07483 410 HVLLAPPFIITAQQIDEIVERLGDAIDA 437 (443)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8999899628999999999999999999
No 229
>PRK07046 aminotransferase; Validated
Probab=99.50 E-value=3.2e-13 Score=100.56 Aligned_cols=339 Identities=17% Similarity=0.133 Sum_probs=173.6
Q ss_pred CCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 997266565897--498-89999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r 30 GIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 30 g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
|+..||+..|.- .+. -+|.|.+|+.+.++.+.+-..+. +....+|+.+.+++++ +.+.+++.++++...
T Consensus 73 G~~YiD~~~g~~~~~lGH~~p~v~~Av~~q~~~g~~~~~~~----~~~~~lae~l~~~~~~----~~~~f~~sGsEA~~~ 144 (452)
T PRK07046 73 GHRYVDFCLGDTGAMFGHSPAPVARALAEQARRGLTTMLPS----EDAAWVGEELARRFGL----PYWQVATTASDANRF 144 (452)
T ss_pred CCEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCC----HHHHHHHHHHHHHHCC----CEEEEECCHHHHHHH
T ss_conf 99998856115512157799999999999987255455785----7999999998987388----617753779999999
Q ss_pred CCCC---CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCC--------CCCCCCC--CCHHHHHHCCCCCC-CCCEEE
Q ss_conf 2222---23322322223333232222--2222222222222--------2222322--21033310001221-220121
Q gi|254780602|r 107 ALMA---TVNMGDEVLIPRPYWVSYPD--MVALCGGIPVFVD--------TQQDDNF--QVSPEKLEQAITPK-TKWLFL 170 (400)
Q Consensus 107 ~~~~---~~~~Gd~Vlv~~P~y~~y~~--~~~~~g~~~~~v~--------~~~~~~~--~~d~~~l~~~i~~~-~k~i~l 170 (400)
+++. .+.+ ++|+...-+|-.... .....+..+.+.+ ....... .-|++.+++.+.+. +-+|+
T Consensus 145 AirlAR~~TgR-~~Ii~f~g~YHG~~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~nd~~~le~~l~~~~iAAvi- 222 (452)
T PRK07046 145 VLRWARAATGR-KKILVFNGCYHGTVDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALADGDVACVL- 222 (452)
T ss_pred HHHHHHHCCCC-CEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHCCCCEEEEE-
T ss_conf 99998645499-7699963676786057898647998667898889887767764301668789999971789867999-
Q ss_pred CCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 135--4210000123-3332111223333320111012211000001223322211123332257414654432234454
Q gi|254780602|r 171 NSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
.-| .| .|.+.+. +.++++-++| +++++++|.||+.. +...-........+.|+ ++ +++|..+ .|+-
T Consensus 223 ~EPi~g~-~G~i~p~~~fl~~lrelc-~~~giLLI~DEV~T-~r~g~Gg~~~~~Gv~PD-----l~--t~gK~ig-gG~P 291 (452)
T PRK07046 223 AEPAMTN-IGMVLPEPGFWEALRELT-RRHGTLLVIDETHT-ISSGPGGYTRAHGLEPD-----FL--VVGKPIA-GGVP 291 (452)
T ss_pred EECCCCC-CCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCC-CCCCCCHHHHHHCCCCC-----EE--EEHHHHC-CCCC
T ss_conf 9768867-887579999999999999-75897999936661-00168538798687966-----67--6444312-8886
Q ss_pred CCCCCCHHHHHHHHHHHCCC---------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC---C
Q ss_conf 44221101226875310012---------22332222222222223467--6432222221100000002455304---7
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQ---------QTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV---P 313 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~---------~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~---~ 313 (400)
+|.+.+.+++.+.+...... .+.+.+.++..|+.+.|+.- ++.+++ .++.-+.+.+.|+++ .
T Consensus 292 ~ga~~~~~~i~~~~~~~~~~~~~g~~~~ggTf~gnpla~AAa~A~L~~l~~~~~~~~----~~~~g~~L~~gL~~~~~~~ 367 (452)
T PRK07046 292 CAVYGFSAALAERARAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTDAAYAH----MFALAARLAAGLRATIARH 367 (452)
T ss_pred EEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH----HHHHHHHHHHHHHHHHHHC
T ss_conf 343402599998887521456787568788878798999999999999955529999----9999999999999999867
Q ss_pred CCEE-EECCCCEEEEEECCCCCCCCCCCCCCCCCH--HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHH
Q ss_conf 7603-302740899862641023321133224898--9999999987397998350228997289996299999999999
Q gi|254780602|r 314 GIRY-MIPDGAFYLYPSCQDLIGKKSPSGDVIRTD--LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACV 390 (400)
Q Consensus 314 g~~~-~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~--~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~ 390 (400)
++.+ ..--|+++.+.=.+................ ..+...+ .+.||.+.|.. +.+.+|...+++++++.++
T Consensus 368 ~~~~~v~g~G~~~~~~f~~~~~~~~~~~~~~~d~~~~~~~~~~l-l~rGVll~p~~-----n~~~~sp~~T~edID~~v~ 441 (452)
T PRK07046 368 GLPWHVTRIGARVEFQFAPTPPRNGAEAGAALDGELEHALHLYL-LNRGVLITPFH-----NMMLVCPQTTAEDVDRLVA 441 (452)
T ss_pred CCCEEEEEECCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHH-HHCCEEECCCC-----CCEEECCCCCHHHHHHHHH
T ss_conf 99759975574689996078875678887443399999999999-97995588767-----5477864489999999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999860
Q gi|254780602|r 391 RIKRFCHSL 399 (400)
Q Consensus 391 rl~~~l~~l 399 (400)
.+++.+.+|
T Consensus 442 a~~~al~el 450 (452)
T PRK07046 442 AFDACLGEL 450 (452)
T ss_pred HHHHHHHHH
T ss_conf 999999985
No 230
>PRK07482 hypothetical protein; Provisional
Probab=99.49 E-value=8.3e-13 Score=98.06 Aligned_cols=349 Identities=13% Similarity=0.113 Sum_probs=176.5
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875--6998778989999999986421013333223323345433
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGET--KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~--~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
..|++.+|+..|- ..+. -+|.|.+|+++.+++-.+ .|... + .+.+..+|+.+.+...- .-+.|.+++++++
T Consensus 47 ~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~Q~~~l~~~~~~~~~-~-~~~~~~lAe~L~~~~p~--~l~~v~f~~SGSE 122 (461)
T PRK07482 47 HQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGH-G-TEASIELSKRIIDRAPA--GMSKVYYGLSGSD 122 (461)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC-C-CHHHHHHHHHHHHHCCC--CCCEEEECCCHHH
T ss_conf 999999996635886425769499999999999658761146775-6-88999999999975788--8687996186699
Q ss_pred CCCCCCCCC-------CCCC-CCCCCCCCCCCCCCCCC-CCCC--------------CCCCCCCC----CC----CCCCC
Q ss_conf 332222222-------3322-32222333323222222-2222--------------22222222----22----23222
Q gi|254780602|r 103 VIFNALMAT-------VNMG-DEVLIPRPYWVSYPDMV-ALCG--------------GIPVFVDT----QQ----DDNFQ 151 (400)
Q Consensus 103 ~l~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~~-~~~g--------------~~~~~v~~----~~----~~~~~ 151 (400)
|...++... .+++ .+|+...-+|-.....+ ...| ......|. .+ +..|.
T Consensus 123 AvE~AiKlAr~y~~~~g~~~r~~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~ 202 (461)
T PRK07482 123 ANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRADAGMSEEQFS 202 (461)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHH
T ss_conf 99999999999988618876545999617855675313002466333466679987832246885456788663377778
Q ss_pred -CHHHHHHCCCCC----CCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCC
Q ss_conf -103331000122----1220121135-42100001-2333321112233333201110122110000012233-22211
Q gi|254780602|r 152 -VSPEKLEQAITP----KTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNV 223 (400)
Q Consensus 152 -~d~~~l~~~i~~----~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~ 223 (400)
...+++++.+.. +.-+|+ .-| +.-.|.+. +++-+++|.++| +++|+++|.||+...|.=.|.-+. .-..+
T Consensus 203 ~~~~~~le~~i~~~~~~~iAAvI-~EPi~g~gG~~~p~~~yl~~lr~lc-~~~gilLI~DEV~tGfGRtG~~fa~e~~gv 280 (461)
T PRK07482 203 AYCADELEELILAEGPDTIAAFI-GEPVLGTGGIVPPPAGYWEAIQAVL-KKYDILLIADEVVTGFGRLGSMFGSQHYGI 280 (461)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HCCCCEEEECCCEECCCCCCCCCHHCCCCC
T ss_conf 99999999999850988489998-0563576885518878979999996-245963771544324750358411116899
Q ss_pred CCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-------CCCCCCCCCCCCCCCCCCCCCC--CCCCCC
Q ss_conf 1233322574146544322344-54442211012268753100-------1222332222222222223467--643222
Q gi|254780602|r 224 EPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-------GQQTSGACSIAQWAAVEALNGP--QDFVVN 293 (400)
Q Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~ 293 (400)
.|+ |+ +++|..+ .| .-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.+++
T Consensus 281 ~PD-----iv--~~gKgl~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~h~~T~~GnPlacAaa~a~L~~l~~~~l~~~ 352 (461)
T PRK07482 281 EPD-----LI--TIAKGLT-SAYAPLSGSIVGEKVWDVLEQGSDEHGAMGHGWTYSGHPICAAAALANLDILERENLVGN 352 (461)
T ss_pred CCC-----EE--EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH
T ss_conf 997-----77--6324445-776762799856889987632654466640156899998999999999999830629999
Q ss_pred CCCCCCCCCCCHHHHH----HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 2221100000002455----304776033027408998626410233211332248989999999987397998350228
Q gi|254780602|r 294 NRKIFEYRRDLCVAQL----QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG 369 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L----~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg 369 (400)
. +++-+++.+.| ++.+.+.=++..| +++=+++-.......+......-...++.. +.+.|+++..+.
T Consensus 353 ~----~~~G~~l~~~L~~~~~~~p~v~~VRG~G-L~~gvelv~~~~~~~~~~~~~~~~~~i~~~-~~~~Gll~~~~~--- 423 (461)
T PRK07482 353 A----GEVGAYFRAQLRAAFGGHPLVGEVRGVG-MLAAVEFVADRDDRTFFDPALKIGPQVSAA-ALERGVIARAMP--- 423 (461)
T ss_pred H----HHHHHHHHHHHHHHHHCCCCEEEEEECC-EEEEEEEEECCCCCCCCCHHHHHHHHHHHH-HHHCCCEEEECC---
T ss_conf 9----9999999999999985499878888067-589999950565466667457999999999-997898896059---
Q ss_pred CCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 99728999--6299999999999999999860
Q gi|254780602|r 370 HGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 370 ~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
..+-+|++ +..+++++++++++|.+.|+.+
T Consensus 424 ~g~vl~~~PPL~Is~~eid~~~~~l~~al~~v 455 (461)
T PRK07482 424 HGDILGFAPPLVLTRAEADEIVAIAAKAVDEV 455 (461)
T ss_pred CCCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 99989997994088999999999999999999
No 231
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.49 E-value=3.1e-13 Score=100.69 Aligned_cols=343 Identities=16% Similarity=0.178 Sum_probs=192.0
Q ss_pred HHHHHHHHHHHHHCCCC----EEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-----CCCCHHHHHHHHHHHHHHCC
Q ss_conf 99999999999986997----2665658974988999999999998388756998-----77898999999998642101
Q gi|254780602|r 16 TLVAAQRVRDLRSKGID----VLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA-----VAGISPLREAIVEKFRRDND 86 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~----ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~-----~~G~~~lR~aia~~~~~~~g 86 (400)
-.++....+.+.+++.. +..++.|-.+.-.|+.+ +.+... .+-.+.|+| +||..++--.....+.+..|
T Consensus 49 E~e~~rh~~~ls~kN~~~~~~~~flG~G~y~~~~P~~v-~~i~~r-~ef~TaytPYQpE~sQG~Lq~l~e~Q~~l~eLtG 126 (449)
T PRK00451 49 EMEVLRELRELAAKNRTAEEYPSFLGAGAYDHYIPAAV-DHIISR-SEFYTAYTPYQPEISQGTLQAIFEYQTMICELTG 126 (449)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHC-CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999964758675766064031578686999-998738-6521146899831113999999999999999859
Q ss_pred CCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 333322332334543---333222222233223222233332322222----2222222222222222322210333100
Q gi|254780602|r 87 LHYTSDQIIVGTGAK---HVIFNALMATVNMGDEVLIPRPYWVSYPDM----VALCGGIPVFVDTQQDDNFQVSPEKLEQ 159 (400)
Q Consensus 87 ~~~~~e~I~it~G~~---~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 159 (400)
+++..-... .|++ +|+.++.+. +..++|+|++-..|.+... +...|.+++.++.++++ .+|+++|++
T Consensus 127 md~~nasl~--dga~a~~ea~~ma~r~--~~r~~vlv~~s~hP~~~~v~~t~a~~~g~~vv~v~~~~~g--~~Dl~~L~~ 200 (449)
T PRK00451 127 MDVANASMY--DGATALAEAALMAVRI--TGRNKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYPEDG--VTDLEALEA 200 (449)
T ss_pred CCCCCCCCC--CHHHHHHHHHHHHHHH--CCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCC--CCCHHHHHH
T ss_conf 874677877--4778999999999864--2687399779878427999986301578427984577566--668899986
Q ss_pred CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEC---
Q ss_conf 01221220121135421000012333321112233333201110122110000012233222111-23332257414---
Q gi|254780602|r 160 AITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PSLYERTLVVN--- 235 (400)
Q Consensus 160 ~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~~~~~~i~~~--- 235 (400)
.+++++-++++.||| -.|.+ +++++|++++ ++.+.+++. +.+. .++.-+. |+-..--|+++
T Consensus 201 ~~~~~~A~vmi~~Pn-t~G~~---edi~~i~~~v-h~~g~l~~~---~~n~-------~aLg~l~~PGe~GaDIvvg~~q 265 (449)
T PRK00451 201 AVDDDTAAVVVQYPN-FFGVI---EDLEEIAEIA-HAGGALFIV---VVDP-------VSLGLLKPPGEYGADIVVGEGQ 265 (449)
T ss_pred HCCCCEEEEEEECCC-CCCCC---CCHHHHHHHH-HHCCCEEEE---EECH-------HHHHCCCCCCCCCCCEEEECCC
T ss_conf 417875899985588-77753---1699999999-865974999---7167-------8860767844345406862476
Q ss_pred --CCCCCCCCCCCCCCCCCCHHHHHHHHHHH----------------------------CCCCCCCCCC-CCCCCCC-CC
Q ss_conf --65443223445444221101226875310----------------------------0122233222-2222222-22
Q gi|254780602|r 236 --GVSKAYAMTGLRIGYAAGALSLIKSMIVL----------------------------QGQQTSGACS-IAQWAAV-EA 283 (400)
Q Consensus 236 --S~SK~~~~~G~RiG~~v~~~~li~~l~~~----------------------------~~~~~~~~~~-~~q~a~~-~~ 283 (400)
+.-|+||-|+ .|++.+.+++.+.+-.. +....+|.+. +...++. .+
T Consensus 266 ~lg~p~~fGGP~--~G~~a~~~~l~r~lPgriVG~t~D~~G~~~y~LtLqtREQhIrReKAtSnIctnq~l~a~~a~~Yi 343 (449)
T PRK00451 266 PLGIPLSFGGPY--LGFFATRKKLVRQMPGRLVGETVDVDGKRGFVLTLQAREQHIRREKATSNICTNQALCALAATIYM 343 (449)
T ss_pred CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 667786678998--787055650010289876672136788612011345532223455554666642278899999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEE-
Q ss_conf 3467643222222110000000245530477603302740899862641023321133224898999999998739799-
Q gi|254780602|r 284 LNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAV- 362 (400)
Q Consensus 284 l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v- 362 (400)
...+.+-+++..+.-..+.+++.+.|++++|++..-+ +.||- ++. .....+..+++++|+++ |+.-
T Consensus 344 ~~lG~~GLk~va~~a~~nAnyl~~~L~~~~~~~~~~~-~~~f~-----Efv------~~~~~~a~~i~k~L~~~-gi~~g 410 (449)
T PRK00451 344 SLLGKEGLREVAEQNHQKAHYLAERLAEIGGVEVLFN-GPFFN-----EFV------VRLPKPAEEVNEALLEK-GILGG 410 (449)
T ss_pred HHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCC-CCEEE-----EEE------EECCCCHHHHHHHHHHC-CCCCC
T ss_conf 9759766999999999999999999873798341689-98025-----899------97898899999999976-99789
Q ss_pred ECCCCCCC--CCEEEEEEE--CCHHHHHHHHHHHHHHH
Q ss_conf 83502289--972899962--99999999999999999
Q gi|254780602|r 363 VQGSSFGH--GPSIRISYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 363 ~pG~~Fg~--~~~iRis~~--~~~e~l~~al~rl~~~l 396 (400)
.|-+.+.+ ++.+=|+.+ .+.++|++-++.|++.+
T Consensus 411 ~~lt~~~p~~~~~lmi~~TEt~sk~dlD~~v~al~eil 448 (449)
T PRK00451 411 YDLGRYYPELGNSLLVAVTELRTKEDIDALVEALGEVL 448 (449)
T ss_pred CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 88544277889979997078999999999999999986
No 232
>PRK07481 hypothetical protein; Provisional
Probab=99.49 E-value=4e-13 Score=99.97 Aligned_cols=349 Identities=16% Similarity=0.154 Sum_probs=177.8
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778-98999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|++.||+..|. ..+. -.|.|.+|+++.++...+ +....| .-+.+..+|+.+..... +-+-+.|++++++++|.
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~-~~~~~~~~~~~~~~la~~L~~~~~-p~~~~rv~f~~SGseA~ 117 (448)
T PRK07481 40 DGKKLLDGVGGLWNVNVGHNREEVKEAIVRQLDELEY-YSTFDGTTHPRAIELSYKLIDMFE-PEGMRRVFFSSGGSDSV 117 (448)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC-CCCCCEEEECCCHHHHH
T ss_conf 8899999543588633257979999999999965677-136664468899999999998518-77878899749779999
Q ss_pred CCCCCCCC-------CCC-CCCCCCCCCCCCCC-CCCCCCCC--------------CCCCCCCCCCCCCCCHHH------
Q ss_conf 22222223-------322-32222333323222-22222222--------------222222222232221033------
Q gi|254780602|r 105 FNALMATV-------NMG-DEVLIPRPYWVSYP-DMVALCGG--------------IPVFVDTQQDDNFQVSPE------ 155 (400)
Q Consensus 105 ~~~~~~~~-------~~G-d~Vlv~~P~y~~y~-~~~~~~g~--------------~~~~v~~~~~~~~~~d~~------ 155 (400)
..+++..- ++| .+|+...-+|-.-. ......|. ..++.|....+-|.-|++
T Consensus 118 E~AiKlAr~y~~~~g~~~r~~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~ 197 (448)
T PRK07481 118 ETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTQDPEELGRLC 197 (448)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999971898863699636863776622121468843446888999982782687522377789989999999
Q ss_pred --HHHCCCC----CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf --3100012----21220121135-4210000-12333321112233333201110122110000012233-22211123
Q gi|254780602|r 156 --KLEQAIT----PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 156 --~l~~~i~----~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
.+++.+. ++.-++++ -| +.-.|.+ .+++.+++|.++| +++|+++|.||++..+.=.|.-+. .-..+.|+
T Consensus 198 ~~~le~~i~~~~~~~iAavi~-EPiqg~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 275 (448)
T PRK07481 198 ARLLEREIAFQGPDTIAAFIA-EPVQGAGGVIVPPANYWPLVREVC-DRHGILLIADEVVTGFGRTGSWFGSRGWGVKPD 275 (448)
T ss_pred HHHHHHHHHHCCCCCEEEEEE-ECCCCCCCEECCCHHHHHHHHHHH-HHCCEEEEEEECCCCCCCCCCHHHHHCCCCCCC
T ss_conf 999999987418884799996-046667971459999999999999-977927999514538884763257656899997
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHCC-------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCC
Q ss_conf 3322574146544322344-544422110122687531001-------222332222222222223467--643222222
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQG-------QQTSGACSIAQWAAVEALNGP--QDFVVNNRK 296 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~~-------~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~ 296 (400)
|+ ++||.++ .| +-+|.+++.+++.+.+..-.. ..+.+.+.+...++.+.|+.- ++.+++.
T Consensus 276 -----iv--~~gK~lg-gG~~Plsa~~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~aaala~L~~i~~~~l~~~~-- 345 (448)
T PRK07481 276 -----IM--CLAKGIS-SGYVPLGATMVNARIEDAFEANADFGGAIMHGYTYSGHPVACAAALASLDIVVREDLPANA-- 345 (448)
T ss_pred -----EE--EECCCCC-CCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH--
T ss_conf -----10--0122435-8977642111568999976568876652100667788979999999999999755699999--
Q ss_pred CCCCCCCCHHHHHH----CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 11000000024553----04776033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 297 IFEYRRDLCVAQLQ----GVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 297 ~~~~~r~~~~~~L~----~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
+++-+.+.+.|+ +.+-+.-++..|-| +-+++-.-...+.+..........++.. +.+.||++.|. .+
T Consensus 346 --~~~g~~l~~~L~~l~~~~~~i~~VRG~Glm-~~ielv~d~~~~~~~~~~~~~~~~v~~~-~~~~Gll~~~~-----g~ 416 (448)
T PRK07481 346 --AKRGAYLLEGLQPLVERFELVGDVRGKGLM-VALDLVADKATRAPIDPSKGYANAVADV-ARENGVLVRPS-----GT 416 (448)
T ss_pred --HHHHHHHHHHHHHHHHHCCCEEEEEECCEE-EEEEEEECCCCCCCCCCCHHHHHHHHHH-HHHCCEEEEEC-----CC
T ss_conf --999999999999999848984675522499-9999960665567677127999999999-99699499724-----99
Q ss_pred EEEEE--EECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 28999--62999999999999999998609
Q gi|254780602|r 373 SIRIS--YAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 373 ~iRis--~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
.+|++ +..+++++++++++|.+.++.+.
T Consensus 417 ~i~~~PpL~it~~eid~~l~~l~~al~~v~ 446 (448)
T PRK07481 417 KIILSPPLVIQREDVDRIVDALDAGFAAVP 446 (448)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 899989978899999999999999999753
No 233
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.49 E-value=8.4e-13 Score=98.04 Aligned_cols=322 Identities=15% Similarity=0.161 Sum_probs=179.0
Q ss_pred CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCC-CCCCC
Q ss_conf 9999999999983887569987789899999999864210133332233233454333322222223----322-32222
Q gi|254780602|r 46 PENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV----NMG-DEVLI 120 (400)
Q Consensus 46 p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~----~~G-d~Vlv 120 (400)
.|.|.+|+++.+++.. -|+.... .+.|..+|+.+..... -+-+.+++++++++|...++...- ..| .+||.
T Consensus 109 ~P~I~eAv~~Ql~~~~-~~s~~~~-~p~~~~LAe~L~~~~P--~~l~~vFF~nSGSEAvE~AiKlAr~y~~~~Gr~~IIs 184 (468)
T PRK11522 109 NPVVVSAVQNQLAKQP-LHSQELL-DPLRAMLAKTLAALTP--GKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIA 184 (468)
T ss_pred CHHHHHHHHHHHHHCC-CCCCCCC-CHHHHHHHHHHHHHCC--CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 9899999999985357-5127727-6699999999997488--8889797379728999999999999777409918999
Q ss_pred CCCCCCCCCCC-CCCCCCCC---CCCCCCCCCCCC--CHHHHHHCCCC------CCCCCEEECCC-CCCCCCC-CCCCCC
Q ss_conf 33332322222-22222222---222222223222--10333100012------21220121135-4210000-123333
Q gi|254780602|r 121 PRPYWVSYPDM-VALCGGIP---VFVDTQQDDNFQ--VSPEKLEQAIT------PKTKWLFLNSP-SNPSGVV-YSQNRL 186 (400)
Q Consensus 121 ~~P~y~~y~~~-~~~~g~~~---~~v~~~~~~~~~--~d~~~l~~~i~------~~~k~i~l~nP-~NPTG~v-~s~~~l 186 (400)
..-+|-.-... ....|... -+.|+.++-.+. .|.+++++.+. +++-++++ -| +--.|.+ .+++-+
T Consensus 185 ~~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~~~~~~~~~~~~vAAvIv-EPIqG~gGv~~pp~~yl 263 (468)
T PRK11522 185 TSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVIL-EPIQGEGGVILPPPGYL 263 (468)
T ss_pred ECCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEEEE-ECCCCCCCCCCCCHHHH
T ss_conf 71786776422203127621025777899984563789999999999986514896899999-77767789826998999
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHH-
Q ss_conf 21112233333201110122110000012233-222111233322574146544322344-544422110122687531-
Q gi|254780602|r 187 RALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIV- 263 (400)
Q Consensus 187 ~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~- 263 (400)
++|-++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+ +++|.++ .| +-+|.+++.+++.+.+..
T Consensus 264 ~~lr~lc-~~~giLLI~DEVqTGfGRTG~~fa~e~~gV~PD-----iv--t~aKgLg-gG~~Pigav~~~~~i~~~~~~~ 334 (468)
T PRK11522 264 TAVRKLC-DEFGALMILDEVQTGMGRTGKMFACEHENVQPD-----IL--CLAKALG-GGVMPIGATIATEEVFSVLFDN 334 (468)
T ss_pred HHHHHHH-HHCCEEEECCCCCCCCCCCCCCCEEECCCCCCC-----EE--EECCCCC-CCCCCEEEEEECHHHHHHHHHC
T ss_conf 9999987-538078822641227886578514523678988-----89--9615555-7877505897629999998517
Q ss_pred -HCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHCC----CC-CEEEECCCCEEEEEECCCCCC
Q ss_conf -00122233222222222222346--76432222221100000002455304----77-603302740899862641023
Q gi|254780602|r 264 -LQGQQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRDLCVAQLQGV----PG-IRYMIPDGAFYLYPSCQDLIG 335 (400)
Q Consensus 264 -~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~~----~g-~~~~~p~g~~y~~~~~~~~~~ 335 (400)
.....+.+.+.+...++.+.|+- .++.+++ .+++-+++.+.|+++ |. +.-++.. |+++=+++.+
T Consensus 335 ~~~hg~Tf~GnPlacAaala~L~ii~~e~l~~~----a~~~G~~L~~~L~~l~~~~p~~i~dVRG~-GLm~giel~~--- 406 (468)
T PRK11522 335 PFLHTTTFGGNPLACAAALATINVLLEQNLPAQ----AEQKGDMLLDGFRQLAREYPDLVQEARGK-GMLMAIEFVD--- 406 (468)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHHCCCCEEEEEEC-CEEEEEEECC---
T ss_conf 774466767997999999999999986459999----99999999999999987686711251003-1699999578---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 321133224898999999998739799835022899728999--62999999999999999998609
Q gi|254780602|r 336 KKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
......++..+++ +||++.+... ..+.||+. +..+++++++++++|.+.|.+++
T Consensus 407 --------~~~~~~v~~~~~~-~Gvlv~~~~~--~~~~lr~~PPL~It~eeid~~l~~l~~aL~~l~ 462 (468)
T PRK11522 407 --------NEIGYNFASEMFR-QRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVIKAARKALAAMR 462 (468)
T ss_pred --------CCHHHHHHHHHHH-CCEEEEECCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --------5008999999997-8919987489--998899959965799999999999999999997
No 234
>PRK05965 hypothetical protein; Provisional
Probab=99.49 E-value=5.8e-13 Score=99.00 Aligned_cols=347 Identities=13% Similarity=0.123 Sum_probs=175.5
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-89999999999983887--569987789899999999864210133332233233454333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGE--TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
.|++.+|+..|- ..+. -+|.|.+|+++.+++-. ++|-...-.+ +..+|+.+.+... -+-++|++++++++|
T Consensus 44 dG~~ylD~~sg~~~~~lGh~hp~v~~Ai~~Q~~~l~~~~~~~~~~~~~--~~~la~~L~~~~p--~~l~~v~f~~SGSEA 119 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAKQMRKLPYATGYFHFGSEP--AIRLAAELAERAP--GSLNHVYFTLGGSDA 119 (459)
T ss_pred CCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHH--HHHHHHHHHHHCC--CCCCEEEEECCHHHH
T ss_conf 999998868628865650597999999999997567735665668669--9999999998578--886879984867999
Q ss_pred CCCCCCC-------CCCCC-CCCCCCCCCCCCCCCC-CCCCCCC------------CCCCCC--CCCCCC--------CC
Q ss_conf 3222222-------23322-3222233332322222-2222222------------222222--222322--------21
Q gi|254780602|r 104 IFNALMA-------TVNMG-DEVLIPRPYWVSYPDM-VALCGGI------------PVFVDT--QQDDNF--------QV 152 (400)
Q Consensus 104 l~~~~~~-------~~~~G-d~Vlv~~P~y~~y~~~-~~~~g~~------------~~~v~~--~~~~~~--------~~ 152 (400)
...++.. -..+| ..|+...-+|-.-... ....+.. ...+|. .....+ .-
T Consensus 120 vE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 199 (459)
T PRK05965 120 VDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNPVGDDPQAIIAA 199 (459)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999997279987579997178589974310257774322356899998623578865568788977889999
Q ss_pred HHHHHHCCCC----CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 0333100012----21220121135-42100001-2333321112233333201110122110000012233-2221112
Q gi|254780602|r 153 SPEKLEQAIT----PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEP 225 (400)
Q Consensus 153 d~~~l~~~i~----~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~ 225 (400)
+.+++++.+. +++-++++ -| +.=.|.+. +++-+++|-++| +++|+++|.||+...+.=.|.-+. --..+.|
T Consensus 200 ~~~~l~~~i~~~~~~~vAAvi~-EPi~g~gG~~~pp~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~P 277 (459)
T PRK05965 200 SVAALEAKVAELGADNVAAFFC-EPIQGSGGVIVPPKGWLKAMREAC-RELGILFVADEVITGFGRTGPLFACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999998618875799995-464466885328768879999998-75691799830541776244741003666188
Q ss_pred CCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 33322574146544322344-54442211012268753100-------1222332222222222223467--64322222
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-------GQQTSGACSIAQWAAVEALNGP--QDFVVNNR 295 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~ 295 (400)
+ |+ +++|.++ .| .-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.+++
T Consensus 278 D-----iv--~~gKgL~-gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~~~~l~~~-- 347 (459)
T PRK05965 278 D-----LM--TVAKGLT-SGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLAN-- 347 (459)
T ss_pred C-----EE--EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH--
T ss_conf 8-----88--8734345-786751689764899987611566565445677899898999999999999986349999--
Q ss_pred CCCCCCCCCHHHHHHCC---CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCC
Q ss_conf 21100000002455304---776033027408998626410233211332248989999999987397998350228997
Q gi|254780602|r 296 KIFEYRRDLCVAQLQGV---PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGP 372 (400)
Q Consensus 296 ~~~~~~r~~~~~~L~~~---~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~ 372 (400)
.+++-+++.+.|+++ +-+.=++..|-| +=+++..-.....+..........++.. +.+.|+++.|.. ++
T Consensus 348 --~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm-~gielv~d~~~~~~~~~~~~~~~~i~~~-~~~~Glli~~~g----~~ 419 (459)
T PRK05965 348 --GQAAAPRFAAGLDALRAHPLVGDVRGRGLL-GALELVADKASKTPFDAALEPADRIFDR-AYANGLVFRAFG----DG 419 (459)
T ss_pred --HHHHHHHHHHHHHHHHCCCCEEEEEECCEE-EEEEEECCCCCCCCCCHHHHHHHHHHHH-HHHCCEEEEECC----CC
T ss_conf --999999999999987649976867825627-9999712654466775547999999999-996992998079----99
Q ss_pred EEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 28999--6299999999999999999860
Q gi|254780602|r 373 SIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 373 ~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
-+|++ +..+++++++++++|.+.++.+
T Consensus 420 vl~l~PPL~It~~eid~~~~~l~~al~ev 448 (459)
T PRK05965 420 VLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89997882089999999999999999999
No 235
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.49 E-value=7.2e-13 Score=98.44 Aligned_cols=350 Identities=13% Similarity=0.121 Sum_probs=180.9
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|++.+|+..|.- .+. -+|.|.+|+.+.++.-.+......+. +-+.++|+.+.+...-+. .+.+++++++++|.
T Consensus 39 ~dG~~YLD~~~g~~~~~lGH~hp~i~~Av~~q~~~l~~~~~~~~~~-~~~~~lae~l~~~~p~~~-~~~v~f~~sGsEAv 116 (426)
T PRK08088 39 VEGREYIDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAY-EPYLELCEKMNQKVPGDF-AKKTLLVTTGSEAV 116 (426)
T ss_pred CCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHCCCCC-CCEEEECCCHHHHH
T ss_conf 9989999915168865108996999999999986478856775566-799999999998577555-65588549769999
Q ss_pred CCCCCCCC-CCC-CCCCCCCCCCCCCCCCC-CCCCC---------------CCCCCCCCCCCCC-CCHHHHHHCCCC---
Q ss_conf 22222223-322-32222333323222222-22222---------------2222222222322-210333100012---
Q gi|254780602|r 105 FNALMATV-NMG-DEVLIPRPYWVSYPDMV-ALCGG---------------IPVFVDTQQDDNF-QVSPEKLEQAIT--- 162 (400)
Q Consensus 105 ~~~~~~~~-~~G-d~Vlv~~P~y~~y~~~~-~~~g~---------------~~~~v~~~~~~~~-~~d~~~l~~~i~--- 162 (400)
..+++.-- ..| ..|+...-+|......+ ...|. ....+|....+-. .-+.+.+++.+.
T Consensus 117 e~AiklAR~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 196 (426)
T PRK08088 117 ENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDA 196 (426)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999987764366636635774898521254248877766778899987402668862357881679999999997447
Q ss_pred --CCCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCC
Q ss_conf --21220121135-421000-012333321112233333201110122110000012233-2221112333225741465
Q gi|254780602|r 163 --PKTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 163 --~~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~ 237 (400)
++.-++++ -| +.-.|. +.+++.++++.++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+ ++
T Consensus 197 ~~~~iAAvi~-EPi~g~gG~~~~~~~yl~~lr~lc-~~~g~llI~DEV~tGfGRtG~~fa~~~~gv~PD-----ii--~~ 267 (426)
T PRK08088 197 APEDIAAIII-EPVQGEGGFYAASPAFMQRLRALC-DQHGIMLIADEVQTGAGRTGTFFAMEQMGVAAD-----LT--TF 267 (426)
T ss_pred CCCCEEEEEE-CCCCCCCCCEECCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCHHHHHHCCCCCC-----EE--EH
T ss_conf 8776789997-775677886638879999999999-876905876330228776674135664198976-----20--12
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHC----
Q ss_conf 44322344544422110122687531001222332222222222223467--643222222110000000245530----
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQG---- 311 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~---- 311 (400)
+|..+ .|+-+|.+++.+++.+.+..-....+.+.+.+...++.+.|+.- ++.+++. ++.-+++.+.|++
T Consensus 268 gK~l~-gG~Plsav~~~~~i~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~e~l~~~~----~~~G~~l~~~L~~l~~~ 342 (426)
T PRK08088 268 AKSIA-GGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLEVFEEENLLQRA----NALGERLKDGLLAIAEK 342 (426)
T ss_pred HHHHC-CCCCCCCEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHHHHHHHHH
T ss_conf 14403-88875000003999953368887888898989999999999999865899999----99999999999999860
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHH
Q ss_conf 477603302740899862641023321133224898999999998739799835022899728999--629999999999
Q gi|254780602|r 312 VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEAC 389 (400)
Q Consensus 312 ~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al 389 (400)
.|.+.-++..| +++=+++-+-.....+. .....+++.++ .+.|+++.++-.+ .+-||+. +..+++++++++
T Consensus 343 ~p~i~~VRG~G-Lm~gvelv~~~~~~~p~---~~~~~~i~~~~-~~~Gll~~~~g~~--gnvir~~PPL~it~~eid~~~ 415 (426)
T PRK08088 343 HPEIGDVRGLG-AMIAIELFEDGDHSKPA---AKLTAQIVARA-RDKGLILLSCGTY--YNVLRILVPLTIEDAQIRQGL 415 (426)
T ss_pred CCCEEEEEECC-EEEEEEEEECCCCCCCC---HHHHHHHHHHH-HHCCCEEEECCCC--CCEEEEECCEECCHHHHHHHH
T ss_conf 99889999445-59999986068767878---99999999999-9689999833899--998999789347899999999
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999998609
Q gi|254780602|r 390 VRIKRFCHSLQ 400 (400)
Q Consensus 390 ~rl~~~l~~l~ 400 (400)
+.|.+.|+.-|
T Consensus 416 ~~l~~al~ea~ 426 (426)
T PRK08088 416 EIIAQCFDEAK 426 (426)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999539
No 236
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=99.49 E-value=9.3e-13 Score=97.78 Aligned_cols=341 Identities=15% Similarity=0.139 Sum_probs=176.8
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-899999999999838875699877898-999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGIS-PLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~-~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|++.+|+..|-- .+. -.|.|.+|+++.+++.. |....+.+ +-...+|+.+....... ..+++++++++++|.
T Consensus 38 dG~~yLD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~~~--~~~~~~~~~~~~~~Lae~l~~~~p~~-~~~~v~f~~SGsEAv 114 (421)
T PRK09792 38 EGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFT--HTAYQIVPYESYVTLAEKINALAPVS-GQAKTAFFTTGAEAV 114 (421)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCCC-CCCEEEEECCCHHHH
T ss_conf 999998926348851006898999999999997446--75555446569999999999847767-875599857835799
Q ss_pred CCCCCCCC-CCC-CCCCCCCCCCCCCCC-CCCCCCC-------------CC--CCCCCCCCC-CCCCHHHHHHCCCC---
Q ss_conf 22222223-322-322223333232222-2222222-------------22--222222223-22210333100012---
Q gi|254780602|r 105 FNALMATV-NMG-DEVLIPRPYWVSYPD-MVALCGG-------------IP--VFVDTQQDD-NFQVSPEKLEQAIT--- 162 (400)
Q Consensus 105 ~~~~~~~~-~~G-d~Vlv~~P~y~~y~~-~~~~~g~-------------~~--~~v~~~~~~-~~~~d~~~l~~~i~--- 162 (400)
..++...- ..| ..|+...-+|-.... .....|. .+ +++|.+... ...-+.+.+++.+.
T Consensus 115 E~AiKlAr~~tgr~~ii~~~~sYHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~~~~~~~~~~ 194 (421)
T PRK09792 115 ENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDI 194 (421)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 99999988752998599981785885230354328976433567889997378078842246662336999999976445
Q ss_pred --CCCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCC
Q ss_conf --21220121135-421000-012333321112233333201110122110000012233-2221112333225741465
Q gi|254780602|r 163 --PKTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 163 --~~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~ 237 (400)
+++-++++ -| +.-.|. +.+++-+++|.++| ++|++++|.||+...+.=.|.-+. .-..+.|+ |+ .+
T Consensus 195 ~~~~iAAvi~-EPiqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----ii--~~ 265 (421)
T PRK09792 195 EAKQVAAIIF-EPVQGEGGFNVAPKELVAAIRRLC-DEHGIVMIADEVQSGFARTGKLFAMDHYADKPD-----LM--TM 265 (421)
T ss_pred CCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEECCCEECCCCCCCCHHHHHHCCCCC-----EE--EE
T ss_conf 6674589996-564577882308989999999999-873967972022106863665226575099986-----87--64
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHH----HC
Q ss_conf 44322344544422110122687531001222332222222222223467--6432222221100000002455----30
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQL----QG 311 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L----~~ 311 (400)
+|..+ .|+-+|.+++.+++++.........+.+.+.+...++.+.|+-- +..+++.+ +.-+++.+.| ++
T Consensus 266 gK~l~-gG~P~~av~~~~~v~~~~~~~~~~~Tf~Gnpl~~aaa~a~L~ii~~e~l~~~v~----~~g~~l~~~L~~~~~~ 340 (421)
T PRK09792 266 AKSLA-GGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN----QLGQRLKNTLIDAKES 340 (421)
T ss_pred CCCCC-CCCCEEEEEECHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH----HHHHHHHHHHHHHHHC
T ss_conf 32234-887718999728886467877647879989899999999999998658999999----9999999999999756
Q ss_pred CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHCCEEEECCCCCCCCCEEEEE--EECCHHHHH
Q ss_conf 4776033027408998626410233211332248989999999---98739799835022899728999--629999999
Q gi|254780602|r 312 VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGL---LEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILE 386 (400)
Q Consensus 312 ~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---l~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~ 386 (400)
.|.+.-++..| +++=+++.+.. ....+.+++.++ +.+.|+++.+...+ .+.||+. +..++++++
T Consensus 341 ~p~v~~VRG~G-lm~gvel~d~~--------~~~p~~~~~~~i~~~~~~~Gll~~~~g~~--g~~i~~~PPL~it~~eid 409 (421)
T PRK09792 341 VPAIAAVRGLG-SMIAAEFNDPQ--------TGEPSAAIAQKIQQRALAQGLLLLTCGAY--GNVIRFLYPLTIPDAQFD 409 (421)
T ss_pred CCCEEEEEECE-EEEEEEECCCC--------CCCCCHHHHHHHHHHHHHCCCEEEECCCC--CCEEEEECCEECCHHHHH
T ss_conf 99889854141-89999975787--------78832999999999999779789944899--898999799238899999
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999998
Q gi|254780602|r 387 EACVRIKRFCH 397 (400)
Q Consensus 387 ~al~rl~~~l~ 397 (400)
+++++|++.|+
T Consensus 410 ~~~~il~~aL~ 420 (421)
T PRK09792 410 AAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999963
No 237
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.48 E-value=1.1e-13 Score=103.45 Aligned_cols=347 Identities=11% Similarity=0.051 Sum_probs=176.8
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|- ..+. -+|.|.+|+++.++.+. .|..+ .+....+|+.+....+ ...+.|.+++++++|..
T Consensus 51 dGn~YiD~~~g~g~~~lGH~hp~V~~Av~~q~~~~~-~~~~~---~~~~~~lAe~L~~~~~--~~~~~V~F~nSGsEA~e 124 (433)
T PRK00615 51 FGKTFIDFCGSWGSLIHGHSHPKICDAIQQGASRGT-SYGLT---SEQEILFATELFSYLG--LEDHKIRFVSSGTEATM 124 (433)
T ss_pred CCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCC---CHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf 899877701418863316798899999999996466-56778---8899999999986279--86365997188399999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCCCC-C---CCCCC----------CCCCCCCCCCCCCHHHHHHCCCC---CCCC
Q ss_conf 222222-3322-322223333232222222-2---22222----------22222222322210333100012---2122
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDMVA-L---CGGIP----------VFVDTQQDDNFQVSPEKLEQAIT---PKTK 166 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~~~-~---~g~~~----------~~v~~~~~~~~~~d~~~l~~~i~---~~~k 166 (400)
.+++.- ...| +.|+...-+|-.+..... . ..... ...|....-.| -|++.+++.+. +++-
T Consensus 125 ~AiklAR~~TgR~~Ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-nd~~~~e~~~~~~~~~iA 203 (433)
T PRK00615 125 TAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPY-NDSQIFHEVMEQLGHRVA 203 (433)
T ss_pred HHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC-CCHHHHHHHHHHCCCCEE
T ss_conf 9999972264887699996776787200123145787666789877778888785216787-739999999985154303
Q ss_pred CEEECCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 0121135--4210000123-333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 167 WLFLNSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 167 ~i~l~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+|++ -| .| .|.+.+. +-+++|-++| +++|+++|.||+-..|.....-......+.|+ |+ +++|..+
T Consensus 204 Avi~-EPi~~~-~G~i~p~~~yL~~lr~lc-~~~giLLI~DEV~tGfRtg~~~a~e~~gV~PD-----i~--t~gK~lg- 272 (433)
T PRK00615 204 GVIF-EPICAN-MGVVLPKPGFIEGIIQTC-RRFGSLSIMDEVVTGFRVAFGGAAAIFDVKPD-----IT--VYGKILG- 272 (433)
T ss_pred EEEE-EEECCC-CCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCCCCEECCCHHHHHHCCCCC-----EE--EECCCCC-
T ss_conf 5787-550246-887689989999999998-76593898513411606254057787399861-----78--7545567-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE
Q ss_conf 4454442211012268753100---1222332222222222223467--6432222221100000002455304776033
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM 318 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~ 318 (400)
.|+-+|.+++.+++++.+.... ...+.+.+.++..|+.+.|+.- ++..+++.+.-++-++-+.+.+++. |+.+.
T Consensus 273 gG~Pi~Av~g~~~im~~~~~~g~~~~~gTf~gnpla~AAa~AtL~~l~~~~~~~~~~~~g~~l~~gl~~~~~~~-g~~~~ 351 (433)
T PRK00615 273 GGLPAAAVVAHRSIMDHLMPEGTIFQAGTLSGNPLAMAAGKASIELCREEGFYTQLSNLEQLFLSPIEEMIRSQ-GFPVS 351 (433)
T ss_pred CCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC-CCCEE
T ss_conf 99870566686999986377898654688740699999999999998357899999999999999999999976-99889
Q ss_pred E-CCCCEEE-EEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 0-2740899-8626410233211332248989999999987397998350228997289996299999999999999999
Q gi|254780602|r 319 I-PDGAFYL-YPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFC 396 (400)
Q Consensus 319 ~-p~g~~y~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l 396 (400)
. -.|++|- +..-....+...........-..|...++ +.||.+.|+.. ..++ +|.+.++++|+..++.+.+.+
T Consensus 352 v~~~gs~~~~~f~~~~~~~~~~~~~~d~~~~~~f~~~~l-~rGV~~~p~~~---~~~f-is~aHt~edi~~t~~a~~~al 426 (433)
T PRK00615 352 LVRYGSMFSFFFRENRPTNLDEAQLSDVEKFQTFYQEAF-SKGVYLSPSPF---EASF-LSSAHSMENLAYAQNVLIDSL 426 (433)
T ss_pred EEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCC---CCCC-CCCCCCHHHHHHHHHHHHHHH
T ss_conf 975576799996799988999998635999999999999-78978898632---2646-430249999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
+++
T Consensus 427 ~~~ 429 (433)
T PRK00615 427 EKI 429 (433)
T ss_pred HHH
T ss_conf 999
No 238
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.48 E-value=8.1e-13 Score=98.12 Aligned_cols=334 Identities=12% Similarity=0.088 Sum_probs=179.2
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-899999999999838875-699877898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..|- ..+. -+|.|.+|+++.++...+ .+.... .+....+|+.+.+..+- .-++|.+++++++|.
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~l~~~~~~~~~--~~~~~~lae~L~~~~p~--~~~~v~f~~SGsEAv 115 (423)
T PRK05630 40 DGSTVIDAMSSWWSAIHGHGHPRLKAAAQKQIDTMSHVMFGGLT--HEPAIKLTHKLLNLTGN--PFDHVFYSDSGSVSV 115 (423)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHHHHHHHHCC--CCCEEEECCCHHHHH
T ss_conf 98999984436887615369999999999998657673467757--68999999999875447--768899628728999
Q ss_pred CCCCCCC----C---CCC-CCCCCCCCCCCCCCC-CCCCCC-----------C--CCCCCCCCCC-----CCCCCHHHHH
Q ss_conf 2222222----3---322-322223333232222-222222-----------2--2222222222-----3222103331
Q gi|254780602|r 105 FNALMAT----V---NMG-DEVLIPRPYWVSYPD-MVALCG-----------G--IPVFVDTQQD-----DNFQVSPEKL 157 (400)
Q Consensus 105 ~~~~~~~----~---~~G-d~Vlv~~P~y~~y~~-~~~~~g-----------~--~~~~v~~~~~-----~~~~~d~~~l 157 (400)
..+++.. . .++ ..|+...-+|-.-.. .....+ . ..++.|..+- +...-.++++
T Consensus 116 E~AiKlAr~~~~~~g~~~r~~Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~l~~l 195 (423)
T PRK05630 116 EVAIKMALQASKGQGHPERTKLLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTLPEQIFAPAPPVRGSSPQAISEYLDSM 195 (423)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999998743898763476555850776664541106766655555788987645689986788878999999999
Q ss_pred HCCCCCCCCCEEECCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEE
Q ss_conf 0001221220121135--42100001-2333321112233333201110122110000012233-222111233322574
Q gi|254780602|r 158 EQAITPKTKWLFLNSP--SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLV 233 (400)
Q Consensus 158 ~~~i~~~~k~i~l~nP--~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~ 233 (400)
+..+.++..++++ -| ++--|... +++.+++|.++| +++++++|.||+...|.=.|.-+. .-..+.|+ |+
T Consensus 196 ~~~~~~~iAAii~-EPi~qg~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gV~PD-----iv 268 (423)
T PRK05630 196 ELLIDETVSAIII-EPIVQGAGGMRFHDVALIEGVATLC-KKHDRFLIVDEIATGFGRTGELFATLSNGVQPD-----IM 268 (423)
T ss_pred HHHCCCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCEECCCCCCCCHHHHHCCCCCC-----EE
T ss_conf 8743887259999-7467777995679879999999873-306805863643205874565202765699776-----89
Q ss_pred ECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 146544322344-54442211012268753100------1222332222222222223467--64322222211000000
Q gi|254780602|r 234 VNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ------GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDL 304 (400)
Q Consensus 234 ~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~ 304 (400)
+++|..+ .| .-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- +++++.. ++.-+.
T Consensus 269 --t~gK~l~-gG~~Pl~av~~~~~i~~~~~~~~~~~~~~hg~T~~GnPl~~Aaa~a~l~~i~~~~l~~~~----~~~g~~ 341 (423)
T PRK05630 269 --CVGKALT-GGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVSHASLEIIETGMWQKQV----KRIEAE 341 (423)
T ss_pred --EECCHHH-CCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHH----HHHHHH
T ss_conf --8762432-886762799763899975427678876505479997889999999999999847899999----999999
Q ss_pred HHHHH---HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EE
Q ss_conf 02455---30477603302740899862641023321133224898999999998739799835022899728999--62
Q gi|254780602|r 305 CVAQL---QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YA 379 (400)
Q Consensus 305 ~~~~L---~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~ 379 (400)
+.+.| ++.+.+.=++..| ...-+++.+. .+..+....+ .+.|+++.|. .+.+|+. +.
T Consensus 342 l~~~L~~L~~~p~V~dVRG~G-lm~~vel~~~-----------~~~~~~~~~~-~~~Gl~~~~~-----g~~l~i~PPL~ 403 (423)
T PRK05630 342 LIAGLSPLRHLPGVADVRVLG-AIGVIEMEQN-----------VNVEEATQAA-LDHGVWIRPF-----GRLLYVMPPYI 403 (423)
T ss_pred HHHHHHHHCCCCCEEEEEECC-EEEEEEECCC-----------CCHHHHHHHH-HHCCCEEEEC-----CCEEEEECCCC
T ss_conf 999999870699678773055-4999995686-----------5699999999-9699479853-----99999938936
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999986
Q gi|254780602|r 380 VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 380 ~~~e~l~~al~rl~~~l~~ 398 (400)
.+++++++++++|++.++.
T Consensus 404 it~eei~~~~~~l~~alkg 422 (423)
T PRK05630 404 TTSEQCAQICTALHAAVKG 422 (423)
T ss_pred CCHHHHHHHHHHHHHHHCC
T ss_conf 8999999999999999778
No 239
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=1.7e-12 Score=96.21 Aligned_cols=345 Identities=13% Similarity=0.091 Sum_probs=180.3
Q ss_pred HCCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897--498-89999999999983887569987-789899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAV-AGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~-~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+..||+..|-- .+. -+|.|.+|+++.+++..+ .+. ....+....+|+.+.+.... .-+.+.++++++++
T Consensus 38 ~dG~~yiD~~~g~~~~~lGh~~p~i~~Av~~q~~~~~~--~~~~~~~~~~~~~lae~L~~~~p~--~~~~v~f~~sGsEA 113 (429)
T PRK08117 38 VDGKEYLDFTSGIAVLNVGHNHPKVVQAIKEQADRLVH--GGSGVIYYESILKLAEELAEITPG--GLDMFFFSNSGAEA 113 (429)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHH
T ss_conf 99799999650877534258969999999999863477--677754776999999999984878--87889994874689
Q ss_pred CCCCCCCC-CCCC-CCCCCCCCCCCCCCCC-CCCCC---------------CCCCCCCCCC------C-CCC-CCHHHHH
Q ss_conf 32222222-3322-3222233332322222-22222---------------2222222222------2-322-2103331
Q gi|254780602|r 104 IFNALMAT-VNMG-DEVLIPRPYWVSYPDM-VALCG---------------GIPVFVDTQQ------D-DNF-QVSPEKL 157 (400)
Q Consensus 104 l~~~~~~~-~~~G-d~Vlv~~P~y~~y~~~-~~~~g---------------~~~~~v~~~~------~-~~~-~~d~~~l 157 (400)
...++... ...| ..|+...-+|-..... ....| ...+++|... + ..+ .-+++++
T Consensus 114 ve~AiklAr~~tgr~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l 193 (429)
T PRK08117 114 IEGALKLAKHVTKRQGIISFTGAFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDPESCSLECLRDL 193 (429)
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 99999999986389859998457788866045531675323457789999836637886325656788056689999999
Q ss_pred HCCCC-----CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 00012-----21220121135-4210000-123333211122333332011101221100000122332-2211123332
Q gi|254780602|r 158 EQAIT-----PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYE 229 (400)
Q Consensus 158 ~~~i~-----~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~ 229 (400)
++.+. ++.-++++ -| +.-.|.+ .+++.++++-++| +++|+++|.||+...+.=.|.-+.. -..+.|+
T Consensus 194 ~~~~~~~~~~~~iAAvii-EPi~g~gG~~~~~~~fl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PD--- 268 (429)
T PRK08117 194 ESLFKRQIAPEEVAAIII-EPVLGEGGYIVPPKEFLQKVREIC-DEHGILLIFDEVQSGFGRTGKWFAAETFGVVPD--- 268 (429)
T ss_pred HHHHHHHCCCCCEEEEEE-ECCCCCCCCEECCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCC---
T ss_conf 999986248887899999-646678893738889999999998-763917973431107776677326540498998---
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHH
Q ss_conf 2574146544322344544422110122687531001222332222222222223467--64322222211000000024
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVA 307 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~ 307 (400)
|+ +++|..+ .|+-+|.+++.+++.+.+..-....+.+.+.+...++.+.|+.- ++.++ ..+++-+.+.+
T Consensus 269 --iv--~~gK~lg-gG~Plsav~~~~~i~~~~~~~~~~~T~~gnp~~~aaa~a~L~~~~~~~l~~----~v~~~g~~l~~ 339 (429)
T PRK08117 269 --IM--TVAKGIA-SGFPLSAVVASKELMDQWPLGAHGTTFGGNPVACAAALATLEVIKEEKLLE----NANNMGAYALE 339 (429)
T ss_pred --EE--EEEECCC-CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHH
T ss_conf --78--8710144-789864221479997066888868589989899999999999997556999----99999999999
Q ss_pred HHHC----CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECC
Q ss_conf 5530----477603302740899862641023321133224898999999998739799835022899728999--6299
Q gi|254780602|r 308 QLQG----VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVS 381 (400)
Q Consensus 308 ~L~~----~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~ 381 (400)
.|++ .|-+.-++..| +++=+++.+... .+. .....++...+ .++||++.++.. ..+.+|++ +..+
T Consensus 340 ~L~~l~~~~p~v~~VRG~G-l~~giel~~~~~--~~~---~~~~~~i~~~~-~~~Gll~~~~g~--~~n~i~~~PPL~is 410 (429)
T PRK08117 340 RLEKLKEKYPVIGDVRGIG-LMIGIEFVDETG--EPD---GDAVEKILDKC-LENGLLLYGCGN--DGNVLRFIPPLTVT 410 (429)
T ss_pred HHHHHHHHCCCEEEEECCC-EEEEEEEECCCC--CCC---HHHHHHHHHHH-HHCCCEEEECCC--CCCEEEEECCCCCC
T ss_conf 9999997199878852266-799999964888--946---99999999999-969958984479--99989997997799
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999999860
Q gi|254780602|r 382 DAILEEACVRIKRFCHSL 399 (400)
Q Consensus 382 ~e~l~~al~rl~~~l~~l 399 (400)
++++++++++|.+.|...
T Consensus 411 ~~eid~~~~~l~~al~e~ 428 (429)
T PRK08117 411 KEEIDQGLSILDKGLGEY 428 (429)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999976
No 240
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.48 E-value=1.7e-12 Score=96.12 Aligned_cols=342 Identities=14% Similarity=0.117 Sum_probs=178.0
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|++.||+..|- ..+. -.|.|.+|+++.+++-.+.. ......+.+..+|+.+..... -.-+.|.+++++++|..
T Consensus 47 dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~~~~-~~~~~~~~~~~lae~L~~~~p--~~l~~v~f~~SGsEAvE 123 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAP-AFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSESVD 123 (445)
T ss_pred CCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHHH
T ss_conf 989999967268741147897999999999986568724-555688899999999998488--87587996087899999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCC-CCCCC--------------CCCCCCCCCC-CCCCCCC-------H-
Q ss_conf 2222223-------3223-22223333232222-22222--------------2222222222-2232221-------0-
Q gi|254780602|r 106 NALMATV-------NMGD-EVLIPRPYWVSYPD-MVALC--------------GGIPVFVDTQ-QDDNFQV-------S- 153 (400)
Q Consensus 106 ~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~-~~~~~--------------g~~~~~v~~~-~~~~~~~-------d- 153 (400)
.++..-. .++. .|+...-+|-.-.. ..... |...++.+.. +.+.|.. .
T Consensus 124 ~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~g~~s~~g~~~~~~~f~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 203 (445)
T PRK09221 124 TALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGLPEHGAEL 203 (445)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHH
T ss_conf 99999999999719997526962037747997220002688543435678899944716876665433456760678999
Q ss_pred HHHHHCCCC---C-CCCCEEECCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 333100012---2-122012113542-1000-0123333211122333332011101221100000122332-2211123
Q gi|254780602|r 154 PEKLEQAIT---P-KTKWLFLNSPSN-PSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~---~-~~k~i~l~nP~N-PTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~ 226 (400)
.+++++.+. + +.-+++ .-|=. =.|. +.+++-+++|.++| +++++++|.||++..+.=.|.-+.. -..+.|+
T Consensus 204 a~~le~~i~~~~~~~iAavi-iEPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEVqtG~GRtG~~fa~e~~gv~PD 281 (445)
T PRK09221 204 ADELERLVALHDASNIAAVI-VEPMAGSAGVLVPPKGYLQRLREIC-DKHGILLIFDEVITGFGRLGAAFAAERFGVTPD 281 (445)
T ss_pred HHHHHHHHHHCCCCCEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCCCCEEECCCCCCC
T ss_conf 99999999853987668999-7775577871418889999999998-755848998415317881357612405767998
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 332257414654432234454442211012268753100-------1222332222222222223467--6432222221
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQ-------GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKI 297 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~-------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~ 297 (400)
|++ ++|.++-.++-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.+++.+
T Consensus 282 -----iv~--~gKgl~gG~~Plsav~~~~ei~d~~~~~~~~~~~~~hg~T~~gnpla~aaa~a~L~~i~~~~l~~~~~-- 352 (445)
T PRK09221 282 -----LIT--FAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSGHPVACAAGLATLDIYREEDLFERAA-- 352 (445)
T ss_pred -----EEE--ECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHH--
T ss_conf -----677--63435678775489996578999760387555323346678889899999999999998646999999--
Q ss_pred CCCCCCCHHHH---HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEE
Q ss_conf 10000000245---530477603302740899862641023321133224898999999998739799835022899728
Q gi|254780602|r 298 FEYRRDLCVAQ---LQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSI 374 (400)
Q Consensus 298 ~~~~r~~~~~~---L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~i 374 (400)
+.-+++.+. |++.+.+.=++.. |+.+=+++..... .......+++..++ +.|+++.++ .+.+
T Consensus 353 --~~g~~l~~~L~~L~~~~~v~dVRG~-Glm~giel~~~~~------~~~~~~~~~~~~~~-~~Gll~~~~-----g~~l 417 (445)
T PRK09221 353 --ELAPYFEDAVHSLKGLPHVIDIRNY-GLVAGIELAPRPG------APGKRGYEAFMKCF-EKGLLVRYT-----GDTI 417 (445)
T ss_pred --HHHHHHHHHHHHHHCCCCEEEEECC-CEEEEEEEECCCC------CHHHHHHHHHHHHH-HCCEEEEEC-----CCEE
T ss_conf --9999999999986269975987504-0899999857888------55578999999999-699289637-----9979
Q ss_pred EEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 999--6299999999999999999860
Q gi|254780602|r 375 RIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 375 Ris--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|++ +..+++++++++++|++.|+++
T Consensus 418 rl~PPL~it~~eid~~~~~l~~al~~v 444 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 998993489999999999999999986
No 241
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.46 E-value=2.1e-12 Score=95.57 Aligned_cols=335 Identities=13% Similarity=0.115 Sum_probs=178.6
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875-69987789899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+..||+..|- ..+. -.|.|.+|+++.+++..+ .|.... . +-...+|+.+.+... ..-+.|.+++++++|
T Consensus 41 ~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~-~-~~~~~lae~L~~~~p--~~l~~v~f~~SGsEA 116 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHGYNHPRLNAAATNQLSKMSHIMFGGFT-H-EPAVELAQLLLEILP--PELNKIFFADSGSVA 116 (429)
T ss_pred CCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC-C-HHHHHHHHHHHHHCC--CCCCEEEECCCHHHH
T ss_conf 999999985632885323799899999999999757785567757-7-799999999998479--775879971865999
Q ss_pred CCCCCCCC-------CCCC-CCCCCCCCCCCCCCC-CCCCC----C-------CCCC--CCCCCC---CCCCC-CHHHHH
Q ss_conf 32222222-------3322-322223333232222-22222----2-------2222--222222---23222-103331
Q gi|254780602|r 104 IFNALMAT-------VNMG-DEVLIPRPYWVSYPD-MVALC----G-------GIPV--FVDTQQ---DDNFQ-VSPEKL 157 (400)
Q Consensus 104 l~~~~~~~-------~~~G-d~Vlv~~P~y~~y~~-~~~~~----g-------~~~~--~v~~~~---~~~~~-~d~~~l 157 (400)
...+++.. ..+| ..|+...-+|-.-.. ..... | ..+. .+|... ...|. -+++.+
T Consensus 117 vE~AiKlA~~y~~~~g~~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~~~~~l 196 (429)
T PRK06173 117 VEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKFGEAWRDEAIEPL 196 (429)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999997289876526750588588757677605764466666678898653468998765654227799999
Q ss_pred HCCCCC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCE
Q ss_conf 000122---1220121135--4210000-12333321112233333201110122110000012233-222111233322
Q gi|254780602|r 158 EQAITP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYER 230 (400)
Q Consensus 158 ~~~i~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~ 230 (400)
++.+.. ++-++++ -| ++-.|.+ .+++-++++.++| +++|+++|.||+...|.=.|.-+. .-..+.|+
T Consensus 197 ~~~~~~~~~~iAavi~-EPi~qg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD---- 270 (429)
T PRK06173 197 QDLLEQHGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELC-DQYGVLLIFDEIATGFGRTGKLFALEHAGVVPD---- 270 (429)
T ss_pred HHHHHHCCCCEEEEEE-EECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCCCHHHCCCCCCC----
T ss_conf 9999855886369999-8644678986678999999999875-124855773013206873668445323689997----
Q ss_pred EEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf 574146544322344-54442211012268753100-----1222332222222222223467--643222222110000
Q gi|254780602|r 231 TLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-----GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRR 302 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-----~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r 302 (400)
|++ ++|..+ .| .-+|.+++.+++.+.+..-. ...+.+.+++...++.+.|+.- ++++++.++. -
T Consensus 271 -ivt--~gKglg-gG~~P~~avi~~~~i~~~~~~g~~~~f~hg~T~~Gnpla~Aaa~a~L~~i~~~~l~~~~~~~----g 342 (429)
T PRK06173 271 -IMC--IGKALT-GGYLTLSATITTEEIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRI----E 342 (429)
T ss_pred -EEE--ECCCCC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH----H
T ss_conf -898--554456-88776178987689996424687666352789986899999999999999864699999999----9
Q ss_pred CCHHHHH---HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--
Q ss_conf 0002455---30477603302740899862641023321133224898999999998739799835022899728999--
Q gi|254780602|r 303 DLCVAQL---QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS-- 377 (400)
Q Consensus 303 ~~~~~~L---~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis-- 377 (400)
+++.+.| ++.+.+.=++..| ++.-+++... .+...+..+++ +.||++.|. .+.+|++
T Consensus 343 ~~l~~~L~~~~~~~~v~dVRG~G-l~~~iel~~~-----------~~~~~l~~~~~-~~Gll~~~~-----g~~l~l~PP 404 (429)
T PRK06173 343 RQLRQELSPAAEFDYVAEVRVLG-AIGVVEMKSP-----------VDMATLQPRFV-EHGIWVRPF-----GKLVYLMPP 404 (429)
T ss_pred HHHHHHHHHHCCCCCEEEECCCC-EEEEEEECCC-----------CCHHHHHHHHH-HCCCEEEEC-----CCEEEEECC
T ss_conf 99999999631699668742357-2999994684-----------56999999999-699589834-----998999589
Q ss_pred EECCHHHHHHHHHHHHHHHHH
Q ss_conf 629999999999999999986
Q gi|254780602|r 378 YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 378 ~~~~~e~l~~al~rl~~~l~~ 398 (400)
+..+++++++++++|.+.|+.
T Consensus 405 L~it~~ei~~~~~~l~~aL~e 425 (429)
T PRK06173 405 FIISQDELTQLTSGLLRVLTQ 425 (429)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
T ss_conf 368999999999999999999
No 242
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=3.3e-12 Score=94.42 Aligned_cols=345 Identities=17% Similarity=0.160 Sum_probs=171.4
Q ss_pred CCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99726656589--7498-8999999999998388756-998778989999999986421013333223323345433332
Q gi|254780602|r 30 GIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETK-YTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 30 g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~-Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
|+..||+..|. ..+. -+|.|.+|+++.+++..+. +.... . +-..++|+.+.+....+ ..+.+++++++++|..
T Consensus 55 G~~ylD~~sg~~~~~lGh~~p~v~~Ai~~Q~~~l~h~~~~~~~-~-~~~~~lae~L~~~~p~~-~~~~~~~~~SGSEAvE 131 (446)
T PRK06058 55 GNRLIDLGSGIAVTTVGNSAPAVVDAVRAQVARFTHTCFMVTP-Y-EGYVAVAEQLNRLTPGD-HEKRSALFNSGAEAVE 131 (446)
T ss_pred CCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCC-C-HHHHHHHHHHHHHCCCC-CCCEEEECCCCHHHHH
T ss_conf 6988780334775121789899999999999743572246665-4-78999999999857876-6626772488668999
Q ss_pred CCCCCC-CCC-CCCCCCCCCCCCCCCCC-CCCCCC-------------CCCCCC----CC-CCCCCCC----------HH
Q ss_conf 222222-332-23222233332322222-222222-------------222222----22-2232221----------03
Q gi|254780602|r 106 NALMAT-VNM-GDEVLIPRPYWVSYPDM-VALCGG-------------IPVFVD----TQ-QDDNFQV----------SP 154 (400)
Q Consensus 106 ~~~~~~-~~~-Gd~Vlv~~P~y~~y~~~-~~~~g~-------------~~~~v~----~~-~~~~~~~----------d~ 154 (400)
.+++.. ... ...|+...-+|-..... ....+. .++.+| .. ......+ ..
T Consensus 132 ~AiKlAR~~tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (446)
T PRK06058 132 NAVKIARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPLSYPYRDGLLDKELATDGEEAAARAI 211 (446)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999997569987999769868898730211278866434678899984566888776663335562223899999999
Q ss_pred HHHHCCCC-CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCE
Q ss_conf 33100012-21220121135-42100001-2333321112233333201110122110000012233-222111233322
Q gi|254780602|r 155 EKLEQAIT-PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYER 230 (400)
Q Consensus 155 ~~l~~~i~-~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~ 230 (400)
+.+++.+. +++-+|++ -| +.-.|.+. +++-+++|-++| +++|+++|.||+...|.=.|.-+. .-..+.|+
T Consensus 212 ~~l~~~~~~~~iAavi~-EPiqg~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD---- 285 (446)
T PRK06058 212 TVIDKQIGADNLAAVII-EPIQGEGGFIVPAEGFLPALLDWC-RENGVVFIADEVQTGFARTGAMFACEHEGIVPD---- 285 (446)
T ss_pred HHHHHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCEECCCCCCCCHHHHHCCCCCC----
T ss_conf 99997438997799997-277688898679889999999999-874925870431206775566045653588998----
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 574146544322344544422110122687531001222332222222222223467--643222222110000000245
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~ 308 (400)
|+ +++|.++ .|+-+|.+++.+++++.........+.+.+.+...++.+.|+.- ++.+++ .++.-+++.+.
T Consensus 286 -iv--t~gKgl~-gG~Plsav~~~~ei~~~~~~~~~g~T~~Gnpla~aaala~L~~i~~e~l~~~----v~~~g~~l~~~ 357 (446)
T PRK06058 286 -LI--TTAKGIA-GGLPLSAVTGRAEIMDAPHVGGLGGTYGGNPVACAAALAAIETIESDDLVAR----ARQIERLVTDR 357 (446)
T ss_pred -EE--EECHHCC-CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHH
T ss_conf -54--4221013-7888510004698860676787677889898999999999999986569999----99998999999
Q ss_pred HHC----CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCH
Q ss_conf 530----477603302740899862641023321133224898999999998739799835022899728999--62999
Q gi|254780602|r 309 LQG----VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSD 382 (400)
Q Consensus 309 L~~----~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~ 382 (400)
|++ .+-+.-++..|-|.. +++-+... ..+. .....+++..+ .+.|+++.++..+ .+-||+. +..++
T Consensus 358 L~~l~~~~~~i~dvRG~GLm~g-ielv~~~~-~~~~---~~~~~~v~~~~-~~~Gll~~~~g~~--g~~lrl~PPL~it~ 429 (446)
T PRK06058 358 LGALQAEDDRIGDVRGRGAMIA-IELVKSGT-TEPD---AELTKALAAAA-HAAGVIVLTCGTY--GNVIRLLPPLVISD 429 (446)
T ss_pred HHHHHHHCCCEEEEEECCEEEE-EEEEECCC-CCCC---HHHHHHHHHHH-HHCCCEEECCCCC--CCEEEEECCEECCH
T ss_conf 9999860997887764546999-99930888-8959---89999999999-9789889625889--99899979945789
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999860
Q gi|254780602|r 383 AILEEACVRIKRFCHSL 399 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l 399 (400)
+++++++++|.+.++.+
T Consensus 430 ~eid~~l~il~~al~ev 446 (446)
T PRK06058 430 ELLSEGLDVLEAALADL 446 (446)
T ss_pred HHHHHHHHHHHHHHHHC
T ss_conf 99999999999999749
No 243
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=1.8e-12 Score=96.06 Aligned_cols=344 Identities=15% Similarity=0.111 Sum_probs=173.7
Q ss_pred HCCCCEEECCCCCC-CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565897-498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 28 SKGIDVLCLTAGEP-DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 28 ~~g~~ii~l~~G~p-~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.+|+..+|++-+.. .+. -.|.|.+|+++.+++- .|.+..-.-+....+|+.+....+. +-+.|+++++++++..
T Consensus 70 ~dG~~YLD~~G~~v~~lGh~hp~v~~Ai~~Q~~~l--~~~~~~~~~~~~~~lA~~L~~~~p~--~l~~v~f~~SGSEAvE 145 (460)
T PRK06082 70 ASGKKYMDFHGNNVHQLGYGHPHVIKKVTEQIAKL--PFSPRRFTNETAIECAEKLTEICGG--ELNRVLFAPGGTSVIG 145 (460)
T ss_pred CCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHHHC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEECCCHHHHHH
T ss_conf 98899998347876856779999999999999758--8876552688999999999985787--7697984396589999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCCC-CC--------------CCCCCCCCCCCCCCCCC-C---H---HHHHHCCC
Q ss_conf 222222-3322-32222333323222222-22--------------22222222222223222-1---0---33310001
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDMV-AL--------------CGGIPVFVDTQQDDNFQ-V---S---PEKLEQAI 161 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~~-~~--------------~g~~~~~v~~~~~~~~~-~---d---~~~l~~~i 161 (400)
.++..- .-.| .+|+...-+|-.-...+ .. .|...++.|....+.|. . | .+.++..+
T Consensus 146 ~AiKlAr~~tgr~kiIs~~~syHG~T~~als~~g~~~~r~~~~pl~~g~~~vp~p~~~~~~~~~~~~~~~~~~~~le~~i 225 (460)
T PRK06082 146 MALKLARHITGNYKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPRADGSDVHYADYLEYVI 225 (460)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999988528864899607867762666550495433368889899975479863236666764311289999999986
Q ss_pred C-CC-CCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECC
Q ss_conf 2-21-220121135-421000-012333321112233333201110122110000012233-222111233322574146
Q gi|254780602|r 162 T-PK-TKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNG 236 (400)
Q Consensus 162 ~-~~-~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S 236 (400)
. ++ +.++ +.-| .+ +|. +.+++-+++|-++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+ +
T Consensus 226 e~~g~iAA~-i~EPi~~-~g~~~P~~~yl~~lr~lc-~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PD-----Iv--~ 295 (460)
T PRK06082 226 EKEGGIGAF-IAEAVRN-TDVQVPSKAYWKRIREIC-DKHNVLLIIDDIPNGMGRSGEWFTHQAFDIEPD-----IL--C 295 (460)
T ss_pred HCCCCEEEE-EECCCCC-CCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCC-----EE--E
T ss_conf 057978999-9616667-888068989999999999-972985760332028875443446631799982-----89--9
Q ss_pred CCCCCCCCCC-CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHC--
Q ss_conf 5443223445-44422110122687531001222332222222222223467--643222222110000000245530--
Q gi|254780602|r 237 VSKAYAMTGL-RIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQG-- 311 (400)
Q Consensus 237 ~SK~~~~~G~-RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~-- 311 (400)
++|.++ .|+ -+|.+++.+++.........+.+.+.+.+...++.+.|+-- ++.+++ .++.-+++.+.|++
T Consensus 296 ~gKglg-gG~~Pisav~~~~~~~~~~~~~~g~~T~~gnPl~cAaAlA~L~iie~e~l~~~----a~~~G~~l~~~L~~L~ 370 (460)
T PRK06082 296 IGKGLG-GGLVPIAAMITKDKYNTAAQISLGHYTHEKSPIGCAAALATMEAIEQEGLLDK----VKADSQFMREKLLEMK 370 (460)
T ss_pred ECHHHH-CCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHH
T ss_conf 881643-89776389987488552015776543678987999999999999972578899----9999999999999998
Q ss_pred --CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHH
Q ss_conf --477603302740899862641023321133224898999999998739799835022899728999--6299999999
Q gi|254780602|r 312 --VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEE 387 (400)
Q Consensus 312 --~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~ 387 (400)
.|.+.-++..| +++=+++..-...... .......+..++ .+.|+.+.+. ..+-||++ +..+++++++
T Consensus 371 ~~~p~VgdVRG~G-Lm~giElv~d~~tk~~---~~~~a~~v~~~~-~~~Gl~~~~~----~gnvirl~PPL~It~~eid~ 441 (460)
T PRK06082 371 AKYPVIGDVRGIG-LLWGIELVTDHETKTR---AYDEAEAVLYQC-LNNGLSFKVS----QGNVIQLSPPLIISREQLTE 441 (460)
T ss_pred HCCCCEEEECCCC-EEEEEEEECCCCCCCC---CHHHHHHHHHHH-HHCCCEEECC----CCCEEEEECCCCCCHHHHHH
T ss_conf 6299788523365-4999997417765656---679999999999-9689179108----99989997991189999999
Q ss_pred HHHHHHHHHHHC
Q ss_conf 999999999860
Q gi|254780602|r 388 ACVRIKRFCHSL 399 (400)
Q Consensus 388 al~rl~~~l~~l 399 (400)
++++|++.++++
T Consensus 442 ~l~~l~~al~ev 453 (460)
T PRK06082 442 ALAIFEEAIAKV 453 (460)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999999
No 244
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=2.6e-12 Score=95.07 Aligned_cols=349 Identities=15% Similarity=0.108 Sum_probs=177.8
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-899999999999838875-699877898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..+|+..|-- .+. -+|.|.+|+++.++...+ .+.... .+-...+|+.+.+...-+. .+.+++++++++|.
T Consensus 36 dG~~ylD~~sg~~~~~lGh~~p~i~~Ai~~ql~~l~~~~~~~~~--~~~~~~lae~L~~~~p~~~-~~~~~F~~SGsEAv 112 (422)
T PRK07495 36 EGRRYIDFAAGIAVVNTGHRHPKVIAAVKAQLDRFTHTCHQVVP--YENYVRLAERLNALVPGDF-EKKTIFVTTGAEAV 112 (422)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC--CHHHHHHHHHHHHHCCCCC-CCEEEEECCCCHHH
T ss_conf 88999992608897634579799999999998546675566546--5799999999997568774-54799727862599
Q ss_pred CCCCCCC-CCCC-CCCCCCCCCCCCCCC-CCCCCCC-------------CCCCCCCCC-CCCCCC--HHHHHHCCCC---
Q ss_conf 2222222-3322-322223333232222-2222222-------------222222222-232221--0333100012---
Q gi|254780602|r 105 FNALMAT-VNMG-DEVLIPRPYWVSYPD-MVALCGG-------------IPVFVDTQQ-DDNFQV--SPEKLEQAIT--- 162 (400)
Q Consensus 105 ~~~~~~~-~~~G-d~Vlv~~P~y~~y~~-~~~~~g~-------------~~~~v~~~~-~~~~~~--d~~~l~~~i~--- 162 (400)
..++..- ...| ..|+...-+|-.-.. .....|. .++.+|... ..+... ..+.+++.+.
T Consensus 113 E~AiKlAr~~tgr~~iis~~~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~l~~~~~~~~ 192 (422)
T PRK07495 113 ENAVKIARAATGRSAVIAFGGGFHGRTFMGMALTGKVVPYKVGFGAMPPDVFHVPFPVELHGVSVDQSLAALDKLFKADV 192 (422)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 99999756527998799987887786421243138876543567889999367078832357766779999999987516
Q ss_pred --CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCC
Q ss_conf --21220121135-4210000-12333321112233333201110122110000012233-2221112333225741465
Q gi|254780602|r 163 --PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGV 237 (400)
Q Consensus 163 --~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~ 237 (400)
.++-++++ -| +.-.|.+ .+++.++++-++| +++|+++|.||+...|.=.|.-+. .-..+.|+ |+ ++
T Consensus 193 ~~~~iAAvIv-EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~TGfGRtG~~fa~e~~gv~PD-----iv--~~ 263 (422)
T PRK07495 193 DPQRVAAIII-EPVQGEGGFYPAPAAFMKALRELC-DQHGILLIADEVQTGFARTGKLFAMEHHEVAAD-----LT--TM 263 (422)
T ss_pred CCCCEEEEEE-CCCCCCCCCEECCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCHHHHCCCCCCC-----EE--EE
T ss_conf 8775789996-676478886638889999999999-873966877630108876655026544899980-----99--96
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC----C
Q ss_conf 443223445444221101226875310012223322222222222234676432222221100000002455304----7
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV----P 313 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~ 313 (400)
+|..+ .|+-+|.+++.+++.+.........+.+.+.+...++++.|+--++ ++..+..++.-+++.+.|+++ |
T Consensus 264 gKgl~-gG~Pl~av~~~~~i~~~~~~~~~~~Tf~Gnpla~aaa~a~L~i~~~--~~l~~~~~~~g~~l~~~L~~l~~~~p 340 (422)
T PRK07495 264 AKSLA-GGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEE--EDLCERANQLGNRLKQRLASIRETVP 340 (422)
T ss_pred CHHHH-CCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 41542-8875168887399883558888666799898999999999999986--48999999999999999999985499
Q ss_pred CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHH
Q ss_conf 7603302740899862641023321133224898999999998739799835022899728999--62999999999999
Q gi|254780602|r 314 GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVR 391 (400)
Q Consensus 314 g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~r 391 (400)
.+.=++.. |+++=+++.+.... .+.. .-...+...+ .+.|+++.++... ++-|||. +..+++++++++++
T Consensus 341 ~v~dvRG~-GLm~giel~~~~~~-~p~~---~~~~~v~~~~-~~~Gll~~~~g~~--~nvi~~~PPL~it~~eid~~~~~ 412 (422)
T PRK07495 341 EIADIRGP-GFMNAVEFNDADTG-LPSA---EFANRVRLEA-LEKGLILLTCGVH--GNVIRFLAPITIQDEVFGEALDI 412 (422)
T ss_pred CEEEEEEC-CEEEEEEEECCCCC-CCCH---HHHHHHHHHH-HHCCCEEEECCCC--CCEEEEECCCCCCHHHHHHHHHH
T ss_conf 88988624-56999998338888-9788---9999999999-9779889834889--99899979902579999999999
Q ss_pred HHHHHHHCC
Q ss_conf 999998609
Q gi|254780602|r 392 IKRFCHSLQ 400 (400)
Q Consensus 392 l~~~l~~l~ 400 (400)
|.+.|...|
T Consensus 413 l~~aL~E~~ 421 (422)
T PRK07495 413 LEASILEAR 421 (422)
T ss_pred HHHHHHHHC
T ss_conf 999999960
No 245
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=99.45 E-value=1.5e-13 Score=102.67 Aligned_cols=345 Identities=18% Similarity=0.206 Sum_probs=200.0
Q ss_pred HCCCCEEECCC--CCCCCC-CCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 86997266565--897498-8999999999998388756998-7789899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTA--GEPDFD-MPENVKYAVVRAMERGETKYTA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~--G~p~~~-~p~~i~~a~~~al~~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+..||+-. |=.=+. .+|.|++|++++++.|. .|+. +...-+|=+.|-+++.. .+.|-|=+.|.++||
T Consensus 45 vDG~~YIDyv~swGPLILGHahp~v~~Av~e~lerG~-syG~PtE~Ei~lA~~i~~~v~~-----~t~e~vRfVnSGTEA 118 (434)
T TIGR00713 45 VDGNEYIDYVLSWGPLILGHAHPKVVEAVKEALERGT-SYGAPTEAEILLAKEIISRVPS-----VTEEMVRFVNSGTEA 118 (434)
T ss_pred CCCCEEEHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCCHHHHHHHHHHHHHCCC-----CCCCEEEEECCCCHH
T ss_conf 3888001211000020117897689999999997301-2689988999999999864055-----546516862176488
Q ss_pred CCCCC---CCCCCCCCCCCCCCCCCCCCCCCC-CC--CCCCCC---CCCCCCC-------CCCC---CHHHHHHCCCCC-
Q ss_conf 32222---222332232222333323222222-22--222222---2222222-------3222---103331000122-
Q gi|254780602|r 104 IFNAL---MATVNMGDEVLIPRPYWVSYPDMV-AL--CGGIPV---FVDTQQD-------DNFQ---VSPEKLEQAITP- 163 (400)
Q Consensus 104 l~~~~---~~~~~~Gd~Vlv~~P~y~~y~~~~-~~--~g~~~~---~v~~~~~-------~~~~---~d~~~l~~~i~~- 163 (400)
=..++ ++++.+ |.||=.+=||-.|.+.+ .. .|+.-. .+|..+. +-.. =|.+.+++.+.+
T Consensus 119 TMsAvRLARG~TGR-~~IiKFeGcYHGh~D~lLv~AGSGaaT~g~CG~P~SpGvP~~~~k~Tl~~PYND~~a~~~~f~~~ 197 (434)
T TIGR00713 119 TMSAVRLARGFTGR-DKIIKFEGCYHGHHDALLVKAGSGAATLGSCGLPTSPGVPEDFAKLTLVLPYNDLEALEEAFEEY 197 (434)
T ss_pred HHHHHHHHHHCCCC-CCEEEECCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHC
T ss_conf 99999986310588-72788617641012320035452101046887788888701143113404517389999999867
Q ss_pred --CCCCEEEC-CCCCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf --12201211-354210000123-33321112233333201110122110000012233222111233322574146544
Q gi|254780602|r 164 --KTKWLFLN-SPSNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 164 --~~k~i~l~-nP~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
+.-.|++= -..| -|.|.++ +.|+.|-++| +++|+++|.||+=..|.-.-.=..-+..+.|| |++ |.|
T Consensus 198 G~~iAgvIvEPv~GN-mGvvpP~~eFL~~Lr~lt-~e~g~LLI~DEV~TGFRva~~GAQ~yfgV~PD-----l~~--lGK 268 (434)
T TIGR00713 198 GEEIAGVIVEPVAGN-MGVVPPKKEFLEGLRELT-EEYGALLIFDEVITGFRVALGGAQEYFGVEPD-----LTT--LGK 268 (434)
T ss_pred CCCEEEEEECCCCCC-CCCCCCCCCHHHHHHHHH-HHHCCEEEEECCCCHHHCCHHHCCHHCCCCCC-----CEE--ECH
T ss_conf 983437886120257-666488522358999999-87295775502210122133215011378741-----034--233
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHH---HCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 322344544422110122687531---0012223322222222222234676---4322222211000000024553047
Q gi|254780602|r 240 AYAMTGLRIGYAAGALSLIKSMIV---LQGQQTSGACSIAQWAAVEALNGPQ---DFVVNNRKIFEYRRDLCVAQLQGVP 313 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~~li~~l~~---~~~~~~~~~~~~~q~a~~~~l~~~~---~~~~~~~~~~~~~r~~~~~~L~~~~ 313 (400)
..| .|+-+|..++.+|+++++.- +-|.-+.+-+.++..|..+.|+..+ +..++..+.-.+-.+-+.+.|++ .
T Consensus 269 I~G-GGlP~gA~gGrrEiM~~laP~G~vYQAGTlsGNPlam~AG~atLk~~~~~~~~Y~~l~~~~~~L~~g~~e~l~~-~ 346 (434)
T TIGR00713 269 IIG-GGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEKGVYTELDELAKRLAEGLSEVLED-K 346 (434)
T ss_pred HHC-CCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH-C
T ss_conf 233-76451012267568843178877445643555889999999999985348883489999999999999999982-7
Q ss_pred CCEE-EECCCCEE-EEEE-CCCCCCCCCCCCCCCCCHH----HHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHH
Q ss_conf 7603-30274089-9862-6410233211332248989----99999998739799835022899728999629999999
Q gi|254780602|r 314 GIRY-MIPDGAFY-LYPS-CQDLIGKKSPSGDVIRTDL----DFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILE 386 (400)
Q Consensus 314 g~~~-~~p~g~~y-~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~ 386 (400)
|+.+ +.-.|+|| +|.. -....+.. +...+|. +|...+|++ ||.+-| |.| ..++ +|.+.++|.|+
T Consensus 347 gip~~~~~~gSMf~~FFtd~~~V~ny~----~A~~SD~e~F~~Ff~~mL~~-GVylpP-S~F--Ea~F-~S~AH~~E~i~ 417 (434)
T TIGR00713 347 GIPHTVNRVGSMFSLFFTDEEEVTNYA----DAKKSDTELFAKFFHEMLEK-GVYLPP-SQF--EACF-ISAAHTEEDIE 417 (434)
T ss_pred CCCEEEEECCCEEEEEECCCCCCCCHH----HHHHHHHHHHHHHHHHHHHC-CCCCCC-CCH--HHHH-HCCCCCHHHHH
T ss_conf 985899504400456657788987889----99886189889999999858-887898-721--1555-16777721178
Q ss_pred ----HHHHHHHHHHHHC
Q ss_conf ----9999999999860
Q gi|254780602|r 387 ----EACVRIKRFCHSL 399 (400)
Q Consensus 387 ----~al~rl~~~l~~l 399 (400)
.+++++.+.++++
T Consensus 418 yaq~~ti~a~~~~f~~~ 434 (434)
T TIGR00713 418 YAQTNTIEAAEEVFAEL 434 (434)
T ss_pred HHHHHHHHHHHHHHHCC
T ss_conf 99999999999998409
No 246
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=99.45 E-value=1e-12 Score=97.56 Aligned_cols=335 Identities=12% Similarity=0.112 Sum_probs=181.9
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322332334543333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
..|+..||+..|. ..+. -+|.|.+|+++.++.-.+ +.+.-..+.+..+++.+....+ -+.|.+++++++|.
T Consensus 33 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~--~~~~~~~~~~~~la~~L~~~~~----~~~v~f~~sGsEAv 106 (395)
T PRK03715 33 HTGKRYLDFIQGWAVNCLGHCNPGMVEALAAQAEKLIN--PSPAFYNEPMAKLAGLLTQHSC----FDKVFFANSGAEAN 106 (395)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC--CCCCCCCHHHHHHHHHHHCCCC----CCEEEEECCHHHHH
T ss_conf 98799988231788777458969999999999975476--7732027899999999841558----88799818758899
Q ss_pred CCCCCCCC------CCC-CCCCCCCCCCCCCCCCCC-CCCCC---CCCCCCCC---CCCCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 22222223------322-322223333232222222-22222---22222222---232221033310001221220121
Q gi|254780602|r 105 FNALMATV------NMG-DEVLIPRPYWVSYPDMVA-LCGGI---PVFVDTQQ---DDNFQVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 105 ~~~~~~~~------~~G-d~Vlv~~P~y~~y~~~~~-~~g~~---~~~v~~~~---~~~~~~d~~~l~~~i~~~~k~i~l 170 (400)
..+++..- ..| .+|+...-+|-....... ..|.. ..+.|..+ ... .-|++.+++.+.+++-++++
T Consensus 107 E~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~-~~d~~~~~~~~~~~~aAvii 185 (395)
T PRK03715 107 EGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAE-LNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCCCEEEEEE
T ss_conf 99999999986246899845999757889874022104686444556789889967555-45589999734998079999
Q ss_pred CCCC-CCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 1354-210000-1233332111223333320111012211000001223-322211123332257414654432234454
Q gi|254780602|r 171 NSPS-NPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF-SNIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 171 ~nP~-NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~-~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-|- --.|.+ .+++-++++-++| +++|+++|.||+...|.=.|.-+ ..-..+.|+ |++ ++|..+ .|+-
T Consensus 186 -EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD-----iv~--~gKgl~-gG~P 255 (395)
T PRK03715 186 -EPVQGEGGVIPATREFMQQLRALT-KQHGLLLIVDEVQTGCGRTGTLFAYELAGIEPD-----IMT--LGKGIG-GGVP 255 (395)
T ss_pred -ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC-----EEE--ECCHHH-CCCC
T ss_conf -378887798529889999999999-518973562011038886668530004899999-----899--752442-8985
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC---CCCEEEECCC
Q ss_conf 4422110122687531001222332222222222223467--6432222221100000002455304---7760330274
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV---PGIRYMIPDG 322 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~~~~p~g 322 (400)
+|.+++.+++. .+..-....+.+.+.+...++.+.|+.- ++.+++ .+++-+++.+.|+++ ..+.-.+..|
T Consensus 256 l~av~~~~~i~-~~~~g~~g~T~~gnpla~aaa~a~L~~i~~~~l~~~----~~~~g~~l~~~L~~l~~~~~i~~vRG~G 330 (395)
T PRK03715 256 LAALLAKAEVA-VFEAGDQGGTYNGNPLMTAVGYAVISQLVAPGFLEG----VRARGEYLKEKLLELSAERGLEGERGEG 330 (395)
T ss_pred EEEEEECHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH----HHHHHHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 28999826742-477898887989971899999999999962689999----9999999999999865039913574355
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 0899862641023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+++=+++.... .....+.+..+ .+.|+++... ..+.||++ +..+++++++++++|++.|++|
T Consensus 331 -l~~~iel~~~~---------~~~~~~~~~~~-~~~gll~~~~----~~n~irl~PpL~it~~eid~~~~~l~~aL~~l 394 (395)
T PRK03715 331 -LLRALLLGKDI---------GPQIVEKARDM-QPDGLLLNAP----RPNLLRFMPALNVTTDEIDQMIAMLRSVLDKL 394 (395)
T ss_pred -EEEEEEECCCC---------CHHHHHHHHHH-HHCCEEEECC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -89999967887---------08999999999-8399899228----99989997994388999999999999999986
No 247
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.45 E-value=3.4e-12 Score=94.33 Aligned_cols=336 Identities=12% Similarity=0.108 Sum_probs=179.0
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-89999999999983887569987789-899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+..||+..|- ..+. -.|.|.+|+++.+++-. |....+. -+....+|+.+..... -.-+.|.+++++++|
T Consensus 40 ~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~lae~L~~~~p--~~l~~vff~~sGSEA 115 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHGYNHPQLNAAMKSQIDAMS--HVMFGGITHQPAIELCRKLVAMTP--QPLECVFLADSGSVA 115 (428)
T ss_pred CCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHH
T ss_conf 9999999866228750047996999999999997578--703688677899999999998488--875869964862899
Q ss_pred CCCCCCCC-------CCCCCCCCCCCCCCCCCCC-CCCCC-----------CCCC--CCCCCC---CCCCCC-CHHHHHH
Q ss_conf 32222222-------3322322223333232222-22222-----------2222--222222---223222-1033310
Q gi|254780602|r 104 IFNALMAT-------VNMGDEVLIPRPYWVSYPD-MVALC-----------GGIP--VFVDTQ---QDDNFQ-VSPEKLE 158 (400)
Q Consensus 104 l~~~~~~~-------~~~Gd~Vlv~~P~y~~y~~-~~~~~-----------g~~~--~~v~~~---~~~~~~-~d~~~l~ 158 (400)
...+++.- ..+..+|+...-+|-.-.. ..... |..+ .+++.. .++.|. -|.++++
T Consensus 116 vE~AlKlAr~y~~~~g~~r~~ii~~~~syHG~T~gals~t~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (428)
T PRK07986 116 VEVAMKMALQYWQAKGEPRQRFLTFRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFA 195 (428)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999997099864499983873899712257316864443455777998501378876656555712399999
Q ss_pred CCCCC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEE
Q ss_conf 00122---1220121135--4210000-123333211122333332011101221100000122332-221112333225
Q gi|254780602|r 159 QAITP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERT 231 (400)
Q Consensus 159 ~~i~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~ 231 (400)
+.+.. ++-++++ -| ++-.|.. .+++-+++|-++| +++|+++|.||+...+.=.|.-+.. -..+.|+
T Consensus 196 ~~~~~~~~~iAAvii-EPi~qg~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD----- 268 (428)
T PRK07986 196 RLMAAHRHEIAAVIL-EPIVQGAGGMRIYHPEWLKRIRKLC-DREGILLIADEIATGFGRTGKLFACEHAGIAPD----- 268 (428)
T ss_pred HHHHHCCCCEEEEEE-ECCCCCCCCCEECCHHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC-----
T ss_conf 999747887018998-3244676983538999999999999-863963661100027886678650000478998-----
Q ss_pred EEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 74146544322344-54442211012268753100-----1222332222222222223467--6432222221100000
Q gi|254780602|r 232 LVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-----GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRD 303 (400)
Q Consensus 232 i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-----~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~ 303 (400)
|+ +++|..+ .| .-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.+++ .++.-+
T Consensus 269 ii--t~gKgl~-gG~~Pl~av~~~~~i~~~~~~~~~~~f~hg~Tf~Gnpla~Aaa~a~L~~i~~~~l~~~----~~~~g~ 341 (428)
T PRK07986 269 IL--CLGKALT-GGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQ----VAAIES 341 (428)
T ss_pred EE--EECCCCC-CCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHH
T ss_conf 89--9752013-8877538999869999630568765410177899998999999999999986569999----999999
Q ss_pred CHHHHH---HCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 002455---30477603302740899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 304 LCVAQL---QGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 304 ~~~~~L---~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
++.+.| ++.+.+.-++-.|.+. -++... ..+...+. ..+.+.||.+.|. .+.+|++ +
T Consensus 342 ~l~~~L~~L~~~~~V~dVRg~Gl~~-~ve~~~-----------p~~~~~~~-~~~~~~Gll~~~~-----g~~i~l~PPL 403 (428)
T PRK07986 342 QLREELAPLRDAEMVADVRVLGAIG-VVETTR-----------PVNMAALQ-RFFVEQGVWIRPF-----GKLIYLMPPY 403 (428)
T ss_pred HHHHHHHHHHCCCCEEEEEECCEEE-EEEECC-----------CCCHHHHH-HHHHHCCCEEEEC-----CCEEEEECCC
T ss_conf 9999999875599578774267289-998079-----------45399999-9999799489745-----9999998991
Q ss_pred ECCHHHHHHHHHHHHHHHHHC
Q ss_conf 299999999999999999860
Q gi|254780602|r 379 AVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l~~l 399 (400)
..+++++++++++|.+.|+..
T Consensus 404 iit~~ei~~~~~~l~~al~e~ 424 (428)
T PRK07986 404 IILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
T ss_conf 499999999999999999755
No 248
>KOG0053 consensus
Probab=99.45 E-value=1.2e-13 Score=103.11 Aligned_cols=186 Identities=19% Similarity=0.205 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCC
Q ss_conf 99999999864210133332233233454333322222223322322223333232222222----22222222222222
Q gi|254780602|r 72 PLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA----LCGGIPVFVDTQQD 147 (400)
Q Consensus 72 ~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~----~~g~~~~~v~~~~~ 147 (400)
+.|..+...+....| ..+.++++.+..|++.+++.++.+|+.|++.+..|..-..+++ .+|++..+++++
T Consensus 77 Pt~~~le~~iaal~g----a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~-- 150 (409)
T KOG0053 77 PTRDVLESGIAALEG----AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD-- 150 (409)
T ss_pred CCHHHHHHHHHHHHC----CCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEECHH--
T ss_conf 966899999998718----86389934407899999998467898589717875009999999999709354330416--
Q ss_pred CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32221033310001221220121135421000012333321112233333201110122110000012233222111233
Q gi|254780602|r 148 DNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSL 227 (400)
Q Consensus 148 ~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~ 227 (400)
|++++++++.++++++++-+|.||+..+-+-++ |.++ +++++++|++|+.....++ ...+.+..
T Consensus 151 -----~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~---l~~l-a~~~g~~vvVDnTf~~p~~-----~~pL~lGA-- 214 (409)
T KOG0053 151 -----DLKKILKAIKENTKAVFLESPSNPLLKVPDIEK---LARL-AHKYGFLVVVDNTFGSPYN-----QDPLPLGA-- 214 (409)
T ss_pred -----HHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHH---HHHH-HHHCCCEEEEECCCCCCCC-----CCHHHCCC--
T ss_conf -----678899862667069999779997500456999---9998-7417978999577676333-----67121388--
Q ss_pred CCEEEEECCCCCCCCCCC-CCCCCCCCH-HHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 322574146544322344-544422110-1226875310012223322222222222
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTG-LRIGYAAGA-LSLIKSMIVLQGQQTSGACSIAQWAAVE 282 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G-~RiG~~v~~-~~li~~l~~~~~~~~~~~~~~~q~a~~~ 282 (400)
-|+++|.+|.++--+ .=.|.++.+ +++.+++...+.....+++.+......+
T Consensus 215 ---DIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~~~~ll~R 268 (409)
T KOG0053 215 ---DIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPFDLFLLSR 268 (409)
T ss_pred ---CEEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf ---789985101444776635147761749999999999998557998899999866
No 249
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=2.4e-12 Score=95.30 Aligned_cols=342 Identities=13% Similarity=0.081 Sum_probs=178.8
Q ss_pred CCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658--97498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..+|+..| ...+. -.|.|.+|+++.+++-.+.... ....+....+|+.+....+- +-+.|++++++++|..
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Ql~~l~~~~~~-~~~~~~~~~lae~L~~~~p~--~l~~v~f~~SGSEA~E 127 (452)
T PRK06943 51 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAMLA-GCTHEPAIELAERLAALTGH--TLGHAFFASDGASAVE 127 (452)
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHHH
T ss_conf 89999983443897713579699999999998657471357-76876999999999974666--5575996087189999
Q ss_pred CCCCCC-------CCCC-CCCCCCCCCCCCCCCC-CCCCCC--------------CCCCCCCCC---CC----CC-CCHH
Q ss_conf 222222-------3322-3222233332322222-222222--------------222222222---23----22-2103
Q gi|254780602|r 106 NALMAT-------VNMG-DEVLIPRPYWVSYPDM-VALCGG--------------IPVFVDTQQ---DD----NF-QVSP 154 (400)
Q Consensus 106 ~~~~~~-------~~~G-d~Vlv~~P~y~~y~~~-~~~~g~--------------~~~~v~~~~---~~----~~-~~d~ 154 (400)
.++..- ..+| ..||...-+|-..... ....|. ..++.|-.. .+ .+ .-++
T Consensus 128 ~AiKlA~~~~~~rg~~~r~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 207 (452)
T PRK06943 128 IALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARAL 207 (452)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999998618998605873478868876301462685120335677677762458997556788887778999999
Q ss_pred HHHHCCCCC---CCCCEEECCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 331000122---1220121135--42100001-23333211122333332011101221100000122332-22111233
Q gi|254780602|r 155 EKLEQAITP---KTKWLFLNSP--SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSL 227 (400)
Q Consensus 155 ~~l~~~i~~---~~k~i~l~nP--~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~ 227 (400)
+++++.+.+ ++-+|++ -| +.-.|.+. +++-+++|-++| +++|+++|.||++..+.=.|.-+.. -..+.|+
T Consensus 208 ~~le~~~~~~~~~iAAviv-EP~iqg~gG~~~~~~~yl~~lr~lc-~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PD- 284 (452)
T PRK06943 208 ADVRRLFAERAGKIAALIV-EPLVQCAAGMAMHDPSYVRGLRALC-DEYGVHLIADEIAVGCGRTGTFFACEQAGVWPD- 284 (452)
T ss_pred HHHHHHHHHCCCCEEEEEE-ECCCCCCCCEEECCHHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCE-
T ss_conf 9999999856997789999-5751467961858899999999998-644964871332028864517710234699882-
Q ss_pred CCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 322574146544322344-54442211012268753100------12223322222222222234676432222221100
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ------GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEY 300 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~------~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~ 300 (400)
|+ +++|..+ .| +-+|.+++.+++.+.+..-. ...+.+.+.+...++++.|+.-++ +...+..++
T Consensus 285 ----ii--t~gKgl~-gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~GnplacAaala~L~~l~~--e~l~~~~~~ 355 (452)
T PRK06943 285 ----FL--CLSKGIS-GGYLPLSLVLSRDEIFDAFYDDDTTRGFLHSHSYTGNPLACRAAVATLDLFAR--DDVLARNAR 355 (452)
T ss_pred ----EE--EECCHHH-CCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHH
T ss_conf ----99--9765212-89865312430388998643799767867577889888999999999999986--579999999
Q ss_pred CCCCHHHHHHCC---CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE
Q ss_conf 000002455304---77603302740899862641023321133224898999999998739799835022899728999
Q gi|254780602|r 301 RRDLCVAQLQGV---PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS 377 (400)
Q Consensus 301 ~r~~~~~~L~~~---~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis 377 (400)
+-+++.+.|+++ +.+.-++..| +++=+++..... . .......++..+ .+.|+++.|. .+.|||+
T Consensus 356 ~g~~l~~~L~~l~~~~~V~dVRG~G-L~~gvel~~~~~---~---~~~~~~~i~~~~-~~~Gll~~~~-----g~~i~l~ 422 (452)
T PRK06943 356 KSALLRAALAPLAAHPQVRHLRQRG-TIFAFDVALDGD---A---ARTFSRRFFEHA-LERELLLRPI-----GTTVYLM 422 (452)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEECC-EEEEEEECCCCC---C---CHHHHHHHHHHH-HHCCEEEEEC-----CCEEEEE
T ss_conf 9999999999873599888863075-899999667876---4---579999999999-9699289864-----9999997
Q ss_pred --EECCHHHHHHHHHHHHHHHHH
Q ss_conf --629999999999999999986
Q gi|254780602|r 378 --YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 378 --~~~~~e~l~~al~rl~~~l~~ 398 (400)
+..+++++++.+++|++.|++
T Consensus 423 PPL~it~~eid~~~~~L~~aL~~ 445 (452)
T PRK06943 423 PPYVLDDEEIAWLAQRTRATLDA 445 (452)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99038899999999999999999
No 250
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.45 E-value=2.9e-12 Score=94.76 Aligned_cols=345 Identities=14% Similarity=0.109 Sum_probs=180.4
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 8699726656589--7498-8999999999998388756998778-9899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
.+|+..||+..|- ..+. -.|.|.+|+.+.++.-. |....| ..+.+..+|+.+.+... -.-+.|++++++++|
T Consensus 44 ~dG~~YlD~~sg~~~~~lGH~~p~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~elAe~L~~~~P--~~l~~v~f~~SGSEA 119 (467)
T PRK07030 44 FEGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLE--HVILAGFSHQPVIELSERLVKITP--AGLDRVFYADNGSSA 119 (467)
T ss_pred CCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCCHHH
T ss_conf 9999999945438863414896999999999997577--724577687799999999997388--886879983784899
Q ss_pred CCCCCCCC-------CCCCC-CCCCCCCCCCCCCCCCCCC-CC------------CCCCCCCC-----CCC-C---C-CC
Q ss_conf 32222222-------33223-2222333323222222222-22------------22222222-----223-2---2-21
Q gi|254780602|r 104 IFNALMAT-------VNMGD-EVLIPRPYWVSYPDMVALC-GG------------IPVFVDTQ-----QDD-N---F-QV 152 (400)
Q Consensus 104 l~~~~~~~-------~~~Gd-~Vlv~~P~y~~y~~~~~~~-g~------------~~~~v~~~-----~~~-~---~-~~ 152 (400)
...++..- ..+|. .|+...-+|-.-...+... |. .++.+|.. +.+ . + .-
T Consensus 120 vE~AiKlAr~y~~~~g~~gr~~iis~~~sYHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~~g~~~~~~~~~ 199 (467)
T PRK07030 120 IEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRN 199 (467)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHH
T ss_conf 99999999999998089887079873373434217777634870114787787888667589864356678888999999
Q ss_pred HHHHHHCCCCC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 03331000122---1220121135--4210000-12333321112233333201110122110000012233-2221112
Q gi|254780602|r 153 SPEKLEQAITP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEP 225 (400)
Q Consensus 153 d~~~l~~~i~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~ 225 (400)
.++++++.+.+ ++-++++ -| ++=.|.+ .+++-+++|-++| +++|+++|.||+...|.=.|.-+. .-..+.|
T Consensus 200 ~~~~le~~l~~~~~~iAAvi~-EPiiqg~GG~~~~~~~yl~~lr~lc-~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~P 277 (467)
T PRK07030 200 MFAHMEQTLAEHHDEIAAVIV-EPLIQGAGGMRMYHPVYLKLLREAC-DRYGVHLIHDEIAVGFGRTGTMFACEQAGIRP 277 (467)
T ss_pred HHHHHHHHHHHCCCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCEECCCCCCCCCCCCCCCCCC
T ss_conf 999999999847997469998-2323367997279989999999999-75594687250031786245853200567899
Q ss_pred CCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH--------CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf 33322574146544322344-5444221101226875310--------01222332222222222223467--6432222
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVL--------QGQQTSGACSIAQWAAVEALNGP--QDFVVNN 294 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~--------~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~ 294 (400)
+ |+ +++|..+ .| +-+|.+++.+++.+.+..- +. .+.+.+.+...++.+.|+-- ++.+++.
T Consensus 278 D-----ii--t~aKgl~-gG~~Pl~av~~~~~I~~~~~~~~~~~~~~~Hg-~Ty~GnPlacAAala~L~ii~~e~l~~~~ 348 (467)
T PRK07030 278 D-----FL--CLSKALT-GGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHS-HSYTGNPLACAAALATLDIFEQDNVIEAN 348 (467)
T ss_pred C-----EE--EEECCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCHHHHH
T ss_conf 8-----89--9704311-68775389987489998763256555576758-89997999999999999999976899999
Q ss_pred CCCCCCCCCCHHHH---HHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf 22110000000245---530477603302740899862641023321133224898999999998739799835022899
Q gi|254780602|r 295 RKIFEYRRDLCVAQ---LQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG 371 (400)
Q Consensus 295 ~~~~~~~r~~~~~~---L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~ 371 (400)
++ .-+++.+. |++.+.+.=++..| +++=+++-.-.....+..........+.+.++ +.|+++.|. .
T Consensus 349 ~~----~g~~l~~~l~~l~~~p~VgdVRG~G-L~~giElv~d~~t~~p~~~~~~~~~~v~~~~~-~~G~l~~~~-----g 417 (467)
T PRK07030 349 RA----LARRMAEATAHLADHPHVAEVRQTG-MALAIEMVQDKASKTPYPWQERRGLKVYQHAL-ERGALLRPL-----G 417 (467)
T ss_pred HH----HHHHHHHHHHHHHCCCCEEEEECCC-CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHH-HCCCEEEEC-----C
T ss_conf 99----9999999999870799758883475-19999970378767888546679999999999-789889734-----9
Q ss_pred CEEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 728999--629999999999999999986
Q gi|254780602|r 372 PSIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 372 ~~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
+-||++ +..++++++++++.|.+.++.
T Consensus 418 nvi~~~PPL~it~~eid~~~~~l~~al~~ 446 (467)
T PRK07030 418 SVVYFLPPYVITPEQIDFLAEVASEGIDI 446 (467)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99999799278999999999999999999
No 251
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.44 E-value=4.4e-12 Score=93.64 Aligned_cols=351 Identities=14% Similarity=0.111 Sum_probs=189.8
Q ss_pred HHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCC---C---CHHHHHHHHHH
Q ss_conf 873897589999999999998699726656589749889999999999983887-5699877---8---98999999998
Q gi|254780602|r 8 LRRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVA---G---ISPLREAIVEK 80 (400)
Q Consensus 8 ~~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~---G---~~~lR~aia~~ 80 (400)
++...|. ++.+.++-.+.+..+ |+|-..+. + +++.+++++-..+.+.. -|||..+ | ..++-+...++
T Consensus 12 l~~~Dpe-i~~~i~~E~~RQ~~~---l~LIASEN-~-~S~~v~~a~gS~ltnkYaEGyPg~Ryy~G~e~iD~iE~la~~r 85 (450)
T PTZ00094 12 LQEHDPE-IYELIEKEKDRQREG---LELIASEN-L-TSRAVLECLGSVFTNKYAEGYPGNRYYGGTEVVDKIENLCQKR 85 (450)
T ss_pred HHHHCHH-HHHHHHHHHHHHHCC---CEEECCCC-C-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 5774999-999999999998779---26974267-5-7999999857742374558899844546642599999999999
Q ss_pred HHHHCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCCC--CCCCCCCCCCCC
Q ss_conf 64210133332--2332334543333222222233223222233332322222--------22222--222222222223
Q gi|254780602|r 81 FRRDNDLHYTS--DQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM--------VALCG--GIPVFVDTQQDD 148 (400)
Q Consensus 81 ~~~~~g~~~~~--e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~--------~~~~g--~~~~~v~~~~~~ 148 (400)
.++.||.+... -||=..+|+ +|...++.++++|||+|+..+..-..|..- ....| .+.+++.+++++
T Consensus 86 a~~lF~~~~~~wgaNVqp~SGs-~AN~av~~all~pGD~im~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~~ 164 (450)
T PTZ00094 86 ALAAFNLDPEEWGVNVQPYSGS-PANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEEG 164 (450)
T ss_pred HHHHHCCCCCCCCCCCCCCCHH-HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
T ss_conf 9998389854366105768669-999999999707999799843566886554334677775401345556773246489
Q ss_pred CCCCHHHHHHCCC-CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 2221033310001-22122012113542100001233-33211122333332011101221-100000122332221112
Q gi|254780602|r 149 NFQVSPEKLEQAI-TPKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIY-EHIVYRNCQFSNIVNVEP 225 (400)
Q Consensus 149 ~~~~d~~~l~~~i-~~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y-~~l~~~~~~~~s~~~~~~ 225 (400)
.+|.|++++.. ..|+|+|++- ++.|++. +.+++.++| ++.+.+++.|-+| ..|+-.+ .+++.....
T Consensus 165 --~IDyd~~~~~a~~~kPklIi~G------~Say~r~id~k~~reIa-d~vGA~l~~D~AHiaGLIAgg-~~psP~~~A- 233 (450)
T PTZ00094 165 --LIDYDKLEKLAKAFRPKLIIAG------ASAYPRDIDYKRFREIC-DSVGAYLMADIAHTSGLVAAG-VLPSPFPYA- 233 (450)
T ss_pred --CCCHHHHHHHHHHHCCCEEEEC------CCCCCCCCCHHHHHHHH-HHCCCEEEEECHHHHHHHCCC-CCCCCCCCC-
T ss_conf --7489999999986199879988------82542543879999999-973998996314444432045-579843455-
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCC-CCCCCCCCCCCCC
Q ss_conf 333225741465443223445444221101----226875310012223322222222222-2346-7643222222110
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGLRIGYAAGAL----SLIKSMIVLQGQQTSGACSIAQWAAVE-ALNG-PQDFVVNNRKIFE 299 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~----~li~~l~~~~~~~~~~~~~~~q~a~~~-~l~~-~~~~~~~~~~~~~ 299 (400)
-|+..|..|++ +|-|-|.+...+ ++.+++.+.---...+.+...+.++.+ +|.+ ....+.+-.+...
T Consensus 234 -----DvVT~TTHKTL--rGPrGGiIl~~k~~~~e~~~kId~aVFPg~qggph~h~IAa~Ava~~Ea~~~efk~Ya~qVv 306 (450)
T PTZ00094 234 -----DVVTTTTHKSL--RGPRSGMIFFRKKIRPDIESKINQAVFPGLQGGPHFHQIAAIAVQLKEVCSPEWKEYAKQVV 306 (450)
T ss_pred -----EEEECCCCCCC--CCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_conf -----04752222347--78984289844664089999854512885446777879999999999975767999999999
Q ss_pred CCCCCHHHHHHCCCCCEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE----CCCCCC-CCC
Q ss_conf 00000024553047760330274--08998626410233211332248989999999987397998----350228-997
Q gi|254780602|r 300 YRRDLCVAQLQGVPGIRYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV----QGSSFG-HGP 372 (400)
Q Consensus 300 ~~r~~~~~~L~~~~g~~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~----pG~~Fg-~~~ 372 (400)
+|.+.+.+.|.+. |+++.. .| +..+.+|+... ..+..+ ++.+|++.||.+. |+..-. .+.
T Consensus 307 ~NAkaLa~~L~~~-G~~vvs-ggTdnHlvlvDl~~~----------g~~G~~-ae~~Le~~gI~~NkN~iP~D~~~~~~S 373 (450)
T PTZ00094 307 DNAKALAAELEKR-GFDLVT-GGTDNHLILWNLRPF----------GITGSK-VEKLLDAVNISVNKNTIPGDKSALAPS 373 (450)
T ss_pred HHHHHHHHHHHHC-CCEEEE-CCCCCEEEEEECCCC----------CCCHHH-HHHHHHHCCEEECCCCCCCCCCCCCCC
T ss_conf 9999999999978-996950-899762799977778----------999999-999998749387478799999999987
Q ss_pred EEEEEEE------CCHHHHHHHHHHHHHHH
Q ss_conf 2899962------99999999999999999
Q gi|254780602|r 373 SIRISYA------VSDAILEEACVRIKRFC 396 (400)
Q Consensus 373 ~iRis~~------~~~e~l~~al~rl~~~l 396 (400)
.|||.-. -.++++++-.+-|.+.+
T Consensus 374 GiRiGT~a~TtrGm~e~em~~ia~lI~~~i 403 (450)
T PTZ00094 374 GIRLGTPALTSRGAVEEDFEFVADFLDRAV 403 (450)
T ss_pred EEECCCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 033167788838998899999999999999
No 252
>PRK08466 consensus
Probab=99.44 E-value=3.9e-12 Score=93.99 Aligned_cols=339 Identities=13% Similarity=0.110 Sum_probs=180.3
Q ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 869972665658--97498-8999999999998388756998778-9899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|++.+|+..| -..+. -.|.|.+|+++.+++-. |....+ ..+.+..+|+.+...... .-+.+++++++++|
T Consensus 43 ~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~--~~~~~~~~~~~~~~lae~L~~~~p~--~l~~v~f~~sGseA 118 (430)
T PRK08466 43 FDGNAYIDCISSWWVNLFGHCNPYINEAIKKQIDELE--HVILAGFTHEPIIKLSERLCELTPR--GLNKCFYADNGSSA 118 (430)
T ss_pred CCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHH
T ss_conf 9989999924377976114797999999999996577--7345775877999999999985788--77879983771999
Q ss_pred CCCCCCCC----CC--CC-CCCCCCCCCCCCCCCCC-CCCCC--------------CCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 32222222----33--22-32222333323222222-22222--------------222222222232221033310001
Q gi|254780602|r 104 IFNALMAT----VN--MG-DEVLIPRPYWVSYPDMV-ALCGG--------------IPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 104 l~~~~~~~----~~--~G-d~Vlv~~P~y~~y~~~~-~~~g~--------------~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
...+++.- .. .+ ..|+...-+|-.-...+ ...|. ...++|-+. ....-+++.+++.+
T Consensus 119 ~E~AiKlAr~y~~~~g~~k~~iis~~~~yHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~-~~~~~~~~~l~~~l 197 (430)
T PRK08466 119 IEVALKMSFHYHKNKGKKKSLFLSLSNSYHGETLGALSVGDVALYKDTYKPLLLECLQTPVPKDD-EAYQEALEALKRIL 197 (430)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHH
T ss_conf 99999999999752268975899964752688521102578400246778877686115899971-66788899999999
Q ss_pred CC---CCCCEEECCC--CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEE
Q ss_conf 22---1220121135--4210000-12333321112233333201110122110000012233-2221112333225741
Q gi|254780602|r 162 TP---KTKWLFLNSP--SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVV 234 (400)
Q Consensus 162 ~~---~~k~i~l~nP--~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~ 234 (400)
.. +.-++++ -| ++-.|.. .+++-+++|.++| +++|+++|.||+...|.=.|.-+. .-..+.|+ |+
T Consensus 198 ~~~~~~iAAvI~-EPiiqg~gg~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~~~~gv~PD-----iv- 269 (430)
T PRK08466 198 EKHAEEICAFIL-EPLVQCAGNMHMYSAEYLKEAIKLC-HKYNIHIIFDEIAVGFGRTGTMFALEQCGISPD-----FL- 269 (430)
T ss_pred HHCCCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEEEECCCCCCCCCHHHHHCCCCCC-----EE-
T ss_conf 858997779999-7876677997689889999999998-535966887310117876676205541699998-----89-
Q ss_pred CCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH--------CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 46544322344-5444221101226875310--------01222332222222222223467--6432222221100000
Q gi|254780602|r 235 NGVSKAYAMTG-LRIGYAAGALSLIKSMIVL--------QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRD 303 (400)
Q Consensus 235 ~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~--------~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~ 303 (400)
+++|..+ .| +-+|.+++.+++.+.+..- ++ .+.+.+.+...++.+.|+.- ++.+++ .++.-+
T Consensus 270 -~~gK~l~-gG~~Pisav~~~~ei~~~~~~~~~~~~~~~h~-~T~~Gnpla~aaala~L~~l~~~~l~~~----~~~~g~ 342 (430)
T PRK08466 270 -CLSKGIT-GGYLPLSVVLTSDEIYNAFYAPYEENKAFLHS-HSYTGNALACAAANATLDIFEDENVIEK----NQILSE 342 (430)
T ss_pred -EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCEECC-CCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHH
T ss_conf -8684101-78877499998589998750565556660126-5788897999999999999996888899----999999
Q ss_pred CHHHHHHC---CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 00245530---477603302740899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 304 LCVAQLQG---VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 304 ~~~~~L~~---~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
++.+.|++ .+.+.-.+.. |+++=+++.+... ...-...+...++ +.||++.|. .+.+|++ +
T Consensus 343 ~l~~~L~~l~~~~~v~~vRg~-Gl~~~iel~~~~~-------~~~~~~~i~~~~l-~~Gll~~~~-----g~~l~~~PpL 408 (430)
T PRK08466 343 FIQKELSRLEKLDFVGNLRQC-GMVFAFELLGTDT-------KERVGLFVFQKAL-KKGLLLRPL-----GNTIYFMPPY 408 (430)
T ss_pred HHHHHHHHHHCCCCEEEEEEC-CEEEEEEEECCCC-------CHHHHHHHHHHHH-HCCEEEECC-----CCEEEEECCC
T ss_conf 999999986249975788412-5389999845885-------0379999999999-789389114-----9999997985
Q ss_pred ECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 2999999999999999998609
Q gi|254780602|r 379 AVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l~~l~ 400 (400)
..+++++++++++|++.|++||
T Consensus 409 ~it~eeid~~~~~l~~al~elk 430 (430)
T PRK08466 409 IITKEEIKKVIEVLEEIIKELK 430 (430)
T ss_pred CCCHHHHHHHHHHHHHHHHHHC
T ss_conf 8899999999999999999739
No 253
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=99.44 E-value=1.2e-14 Score=109.21 Aligned_cols=202 Identities=20% Similarity=0.312 Sum_probs=142.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 223323345433332222222332232222333----3232222222222222222222223222103331000122122
Q gi|254780602|r 91 SDQIIVGTGAKHVIFNALMATVNMGDEVLIPRP----YWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 91 ~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P----~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
+|+-+-|..+..+|+.++.+||..||+|+...= |......++...|.++.+++.+ |+.+.+++++++||
T Consensus 69 Ae~A~AtAsGMsAi~A~l~~L~~AGDhvv~sRSlFGst~~~~~~~l~rFGv~v~fv~~~-------Dl~~WeaA~~~nTk 141 (386)
T TIGR01325 69 AERAVATASGMSAILAALMALLSAGDHVVASRSLFGSTVVLVSEILPRFGVEVSFVDAT-------DLKAWEAALKPNTK 141 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHCCEEEEEECCCCCCCEEEEECCCC-------CHHHHHHHCCCCCC
T ss_conf 03788642138999999999861687799851000320021012534354067517867-------87888985699950
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 01211354210000123333211122333332011101221100000122332221112333225741465443223445
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
++++=+|+||-+.+.+ ++++.|+ |.-.+..||+|.++. +|+.+- |--..--|+++|.+|.-=--|=
T Consensus 142 l~f~EtPSNPl~e~~D---i~AlaEL-AHA~GA~lvvDN~f~---------tP~~qq-PL~lGaDvvv~SATK~IDGqGR 207 (386)
T TIGR01325 142 LVFVETPSNPLAELVD---IAALAEL-AHAVGALLVVDNVFA---------TPVLQQ-PLKLGADVVVYSATKHIDGQGR 207 (386)
T ss_pred EEEEECCCCHHHHHHH---HHHHHHH-HHHCCCEEEEHHHHH---------HHHHCC-CCCCCCEEEEECCCEEECCCCC
T ss_conf 7886368870467999---9999998-873341002114564---------100138-8645640798646201138754
Q ss_pred CC-CCCCCHHHHHHH-HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE
Q ss_conf 44-422110122687-531001222332222222222223467643222222110000000245530477603
Q gi|254780602|r 247 RI-GYAAGALSLIKS-MIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY 317 (400)
Q Consensus 247 Ri-G~~v~~~~li~~-l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~ 317 (400)
=+ |.+.++++++++ ...+..+..-.+|++.-|..++.|+.. .-..+.-......+.+.|++.|+++.
T Consensus 208 vlGGv~~G~~e~~~~~v~~~lr~~GpalSpFNAW~lLkGlETL----~lR~~~~~~sAl~lA~~L~~~p~v~~ 276 (386)
T TIGR01325 208 VLGGVILGSEELMEEFVAKFLRHTGPALSPFNAWVLLKGLETL----SLRVQKQADSALALAEWLEEQPKVQA 276 (386)
T ss_pred EECCEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_conf 0121453607775348999974257432367899985034578----99998614789999999970895579
No 254
>PRK07894 consensus
Probab=99.43 E-value=4.4e-12 Score=93.64 Aligned_cols=338 Identities=14% Similarity=0.113 Sum_probs=179.4
Q ss_pred HCCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 869972665658--97498-89999999999983887569987789-899999999864210133332233233454333
Q gi|254780602|r 28 SKGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGETKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 28 ~~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
..|+..+|+..| ...+. -.|.|.+|+++.+++-. |....+. .+....+|+.+.+... -.-++|++++++++|
T Consensus 48 ~dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~~l~--~~~~~~~~~~~~~~lae~L~~~~p--~~l~~vff~~sGSeA 123 (430)
T PRK07894 48 GGPIEVLDAMSSWWTAIHGHGHPVLDAALTRQLATMN--HVMFGGLTHEPAARLAQLLVDITP--AGLDTVFFSDSGSVS 123 (430)
T ss_pred CCCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCC--CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCCHHH
T ss_conf 9999988730679854037698999999999997577--845687576899999999998488--887979972781889
Q ss_pred CCCCCCCC-------CCCCC-CCCCCCCCCCCCCC-CCCCCC---C----------CCCCCCCCCCCCCC-CHHHHHHCC
Q ss_conf 32222222-------33223-22223333232222-222222---2----------22222222223222-103331000
Q gi|254780602|r 104 IFNALMAT-------VNMGD-EVLIPRPYWVSYPD-MVALCG---G----------IPVFVDTQQDDNFQ-VSPEKLEQA 160 (400)
Q Consensus 104 l~~~~~~~-------~~~Gd-~Vlv~~P~y~~y~~-~~~~~g---~----------~~~~v~~~~~~~~~-~d~~~l~~~ 160 (400)
...++... -.+|. +|+...-+|-.-.. .....+ . ...+.+..+. .|. ...+++++.
T Consensus 124 vE~AiKlAr~y~~~~g~~~r~~ii~~~~sYHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~l~~~ 202 (430)
T PRK07894 124 VEVAVKMALQYWRSRGRPGKHRLMTWRGGYHGDTFTPMSVCDPDGGMHSLWTDVLARQVFAPQVPR-DYDPAYSAAFEAQ 202 (430)
T ss_pred HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHH
T ss_conf 999999999999971887750799971740477711477533877766666788877666899974-3267889999999
Q ss_pred CC---CCCCCEEECCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEE
Q ss_conf 12---21220121135--42100001-23333211122333332011101221100000122332-22111233322574
Q gi|254780602|r 161 IT---PKTKWLFLNSP--SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLV 233 (400)
Q Consensus 161 i~---~~~k~i~l~nP--~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~ 233 (400)
+. +++-++++ -| ++-.|.+. +++-+++|.++| +++|+++|.||+...+.=.|.-+.. -..+.|+ |+
T Consensus 203 l~~~~~~iAaii~-EP~iqg~GG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PD-----ii 275 (430)
T PRK07894 203 LAQHADELAAVIV-EPVVQGAGGMRFHDPRYLRDLRDIC-DRHDVLLIFDEIATGFGRTGALFAADHAGVSPD-----IM 275 (430)
T ss_pred HHHCCCCEEEEEE-ECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCE-----EE
T ss_conf 9846998669999-7874388981028999999999987-512762650213117873567635431898863-----99
Q ss_pred ECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC-----CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCH
Q ss_conf 146544322344-54442211012268753100-----122233222222222222346--7643222222110000000
Q gi|254780602|r 234 VNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ-----GQQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRDLC 305 (400)
Q Consensus 234 ~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~-----~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~~ 305 (400)
+++|..+ .| +-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+. .++.+++.++.-+.-++.+
T Consensus 276 --~~aKgl~-gGy~Pl~avl~~~~i~~~~~~~~~~~~~Hg~Ty~GnplacAaala~L~~i~~e~l~~~~~~~g~~l~~~L 352 (430)
T PRK07894 276 --CVGKALT-GGYLTLAATLCTADVAHTISAGEAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRVAEIEAGLTAGL 352 (430)
T ss_pred --EECCHHH-CCCCCCEEEEEHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf --9773544-8997620122429899745678888612378988898999999999999985679999999999999999
Q ss_pred HHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHH
Q ss_conf 245530477603302740899862641023321133224898999999998739799835022899728999--629999
Q gi|254780602|r 306 VAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDA 383 (400)
Q Consensus 306 ~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e 383 (400)
+.+++.+.+.=++..| +..-+++.+.. +..... ..+.++||++.|. .+.||+. +..+++
T Consensus 353 -~~l~~~p~V~dVRg~G-l~~~vel~~~~-----------~~~~~~-~~a~~~Gvl~r~~-----~n~i~l~PPL~it~~ 413 (430)
T PRK07894 353 -APARALPGVTDVRVLG-AIGVIELDRPV-----------DLAVAT-PAALDHGVWLRPF-----RNLVYAMPPYICTPA 413 (430)
T ss_pred -HHHCCCCCEEEECCCC-EEEEEEECCCC-----------CHHHHH-HHHHHCCCEEEEC-----CCEEEEECCCCCCHH
T ss_conf -9745799769894668-09999967845-----------689999-9999799389854-----999999799468999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999999860
Q gi|254780602|r 384 ILEEACVRIKRFCHSL 399 (400)
Q Consensus 384 ~l~~al~rl~~~l~~l 399 (400)
++++.++.|.+.++++
T Consensus 414 eid~~~~~l~eal~~l 429 (430)
T PRK07894 414 EIAQITSAMVEVARAL 429 (430)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999960
No 255
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.42 E-value=7.1e-15 Score=110.66 Aligned_cols=168 Identities=20% Similarity=0.332 Sum_probs=114.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998642101333322332334543333222222233223222233332322222222222222222222232
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDN 149 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 149 (400)
..+..+..|+.| |. ..-.+++||++.++..++.++|+|||+|+++.-+--.....+.++|++|++++...+..
T Consensus 61 I~eAq~laA~~~----ga---~~s~flvnGsT~g~~a~i~a~~~~gd~vlv~RN~HkSv~~gl~l~g~~Pvyl~p~~~~~ 133 (294)
T cd00615 61 IKEAQELAARAF----GA---KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294)
T ss_pred HHHHHHHHHHHH----CC---CCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCC
T ss_conf 999999999983----99---96699827726999999998328999899826518999999998698489960643555
Q ss_pred ----CCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCC
Q ss_conf ----2210333100012--2122012113542100001233332111223333320111012211-00000122332221
Q gi|254780602|r 150 ----FQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVN 222 (400)
Q Consensus 150 ----~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~ 222 (400)
..++++++++++. +..|++++++|+ --|.+++ +++|+++| +++++.|++||+|. ++.|.+.-+.+...
T Consensus 134 ~gi~~~i~~~~~~~al~~~p~~kav~lt~Pt-Y~G~~~D---l~~i~~~~-h~~~~~llVDEAhGah~~F~~~lp~~a~~ 208 (294)
T cd00615 134 YGIAGGIPPETFKKALIEHPDAKAAVITNPT-YYGICYN---LRKIVEEA-HHRGLPVLVDEAHGAHFRFHPILPSSAAM 208 (294)
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCEEEEECCC-CCEEEEC---HHHHHHHH-HHCCCEEEEECCCHHHHHCCCCCCCCHHH
T ss_conf 6953899999999999858996589997799-8877668---99999998-40499799977540344318778755666
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCHHH
Q ss_conf 112333225741465443223445444-2211012
Q gi|254780602|r 223 VEPSLYERTLVVNGVSKAYAMTGLRIG-YAAGALS 256 (400)
Q Consensus 223 ~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~~~~ 256 (400)
. + -.+++.|.-|+. |++.-+ ++....+
T Consensus 209 ~--G---AD~vv~S~HKtL--~altQ~s~lh~~~~ 236 (294)
T cd00615 209 A--G---ADIVVQSTHKTL--PALTQGSMIHVKGD 236 (294)
T ss_pred C--C---CEEEEECHHHCC--CCCCHHHHEEECCC
T ss_conf 6--9---639996232145--33222532023799
No 256
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.41 E-value=1.6e-11 Score=90.31 Aligned_cols=345 Identities=15% Similarity=0.108 Sum_probs=200.4
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCC------CCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 89999999999998699726656589749889999999999983887-569------98778989999999986421013
Q gi|254780602|r 15 ATLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKY------TAVAGISPLREAIVEKFRRDNDL 87 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y------~~~~G~~~lR~aia~~~~~~~g~ 87 (400)
.++++.++..+.++. .|.|=.-|. | +++.|++|+-.-+.+.. -|| +...-..++-+...++.++.||.
T Consensus 13 ~i~~~i~~e~~rq~~---~ieLIASEN-~-~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga 87 (413)
T COG0112 13 EIFEAIQQELERQRE---HIELIASEN-F-TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGA 87 (413)
T ss_pred HHHHHHHHHHHHHHH---CEEEEECCC-C-CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCC
T ss_conf 999999999998863---433551255-4-78999999745775301158997635678721799999999999998488
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCC--CCCCCCCCCCCCCCCCHHHHHHCCC-
Q ss_conf 3332233233454333322222223322322223333232222---222222--2222222222232221033310001-
Q gi|254780602|r 88 HYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD---MVALCG--GIPVFVDTQQDDNFQVSPEKLEQAI- 161 (400)
Q Consensus 88 ~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~---~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i- 161 (400)
+ --||=+.+|+ +|...++.++++|||+|+-.+-....|.. -....| .+.+.++.+++++ .+|.|++++..
T Consensus 88 ~--~anVQPhSGs-~AN~av~~All~pGD~imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~-~IDyD~~~k~a~ 163 (413)
T COG0112 88 E--YANVQPHSGS-QANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETG-LIDYDEVEKLAK 163 (413)
T ss_pred C--CCCCCCCCCH-HHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC-CCCHHHHHHHHH
T ss_conf 7--5045888756-89999999973898857505678787655799877664057767624063347-517999999999
Q ss_pred CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCC
Q ss_conf 22122012113542100001233-33211122333332011101221-10000012233222111233322574146544
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIY-EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSK 239 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y-~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 239 (400)
..|+|+|+.- ++.|++. +++++.++| .+-+.+++.|-+| ..|+=.| .|++.... --++.+|..|
T Consensus 164 e~kPKlii~G------~SaY~r~id~~~~reIa-d~VGA~L~~DmAHiaGLVA~G-~~p~P~~~------AdvVTtTTHK 229 (413)
T COG0112 164 EVKPKLIIAG------GSAYSRPIDFKRFREIA-DEVGAYLMVDMAHVAGLIAGG-VHPNPLPH------ADVVTTTTHK 229 (413)
T ss_pred HHCCCEEEEC------CCCCCCCCCHHHHHHHH-HHHCCEEEEHHHHHHHHHHCC-CCCCCCCC------CCEEECCCCC
T ss_conf 8499789977------60355446789999999-871936772177888887456-67999875------5267577534
Q ss_pred CCCCCCCCCCCCCCHH-HHHHHHHHHCCCCCCCCCCCCCCC-C--CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 3223445444221101-226875310012223322222222-2--222346-7643222222110000000245530477
Q gi|254780602|r 240 AYAMTGLRIGYAAGAL-SLIKSMIVLQGQQTSGACSIAQWA-A--VEALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPG 314 (400)
Q Consensus 240 ~~~~~G~RiG~~v~~~-~li~~l~~~~~~~~~~~~~~~q~a-~--~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g 314 (400)
+| +|-|-|.+.++. ++.+++.+.- .......+..+. + .-++.+ .+.-+++-.+...+|.+.+.+.|.+. |
T Consensus 230 Tl--rGPrGG~Il~~~eel~kkin~aV--FPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G 304 (413)
T COG0112 230 TL--RGPRGGIILTNDEELAKKINSAV--FPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-G 304 (413)
T ss_pred CC--CCCCCEEEEECCHHHHHHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC-C
T ss_conf 77--89984179836299998764000--7766788278889999999999728138999999999999999999976-9
Q ss_pred CEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC-CCCCCC-----CCEEEEEE------EC
Q ss_conf 60330274--089986264102332113322489899999999873979983-502289-----97289996------29
Q gi|254780602|r 315 IRYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ-GSSFGH-----GPSIRISY------AV 380 (400)
Q Consensus 315 ~~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~~Fg~-----~~~iRis~------~~ 380 (400)
+++.. .| +-.+.+|+... ..+ -.-+..+|++.||.+.- +-.|.+ ...|||.- +-
T Consensus 305 ~~vvs-GgTdnHl~lVDl~~~----------~~~-Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~ 372 (413)
T COG0112 305 FKVVS-GGTDNHLVLVDLRSK----------GLT-GKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGF 372 (413)
T ss_pred CEEEC-CCCCCEEEEEECCCC----------CCC-HHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCC
T ss_conf 86715-886444899972467----------987-789999999709765268899999888787663406688863579
Q ss_pred CHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999860
Q gi|254780602|r 381 SDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 381 ~~e~l~~al~rl~~~l~~l 399 (400)
.++++++-.+-|.+.++..
T Consensus 373 ~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 373 GEAEMEEIADLIADVLDGL 391 (413)
T ss_pred CHHHHHHHHHHHHHHHHCC
T ss_conf 8899999999999999550
No 257
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.41 E-value=2.3e-12 Score=95.37 Aligned_cols=347 Identities=13% Similarity=0.131 Sum_probs=173.2
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-899999999999838875-699877898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..||+..|-. .+. -+|.|.+|+++.++.-.+ +|.... .+ -+..+|+.+.+...-.. .+.|.+++++++|.
T Consensus 53 dG~~yLD~~~g~~~~~lGh~~p~v~~Ai~~Q~~~l~~~~~~~~~-~~-~~~~lae~L~~~~p~~~-~~~v~f~~SGsEAv 129 (454)
T PRK06918 53 DGNQYIDFAGAIGTINVGHCHPKVKEALHKQVDQYIHTGFNVMM-YE-PYIELAEKLAALAPGSF-DKQVLFLNSGAEAV 129 (454)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCC-CH-HHHHHHHHHHHHCCCCC-CCEEEEECCCHHHH
T ss_conf 97999991506986552689799999999998646676777554-76-99999999998477454-74699827851799
Q ss_pred CCCCCCCC-CCC-CCCCCCCCCCCCCCCCC-CCCCC-------------CCCCCCCC----CCCC-----C-CCHHHHHH
Q ss_conf 22222223-322-32222333323222222-22222-------------22222222----2232-----2-21033310
Q gi|254780602|r 105 FNALMATV-NMG-DEVLIPRPYWVSYPDMV-ALCGG-------------IPVFVDTQ----QDDN-----F-QVSPEKLE 158 (400)
Q Consensus 105 ~~~~~~~~-~~G-d~Vlv~~P~y~~y~~~~-~~~g~-------------~~~~v~~~----~~~~-----~-~~d~~~l~ 158 (400)
..++...- ..| ..|+..+-+|......+ ...|. .+..+|.. ...+ + ....++++
T Consensus 130 E~AlKlAr~~t~r~~ii~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~ 209 (454)
T PRK06918 130 ENAVKIARKYTKRQGIIAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFIIEEFK 209 (454)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999872887567633871786244565307985422467888998366578642357789976677899999999
Q ss_pred CCC----CC-CCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCE
Q ss_conf 001----22-1220121135-42100001-2333321112233333201110122110000012233-222111233322
Q gi|254780602|r 159 QAI----TP-KTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYER 230 (400)
Q Consensus 159 ~~i----~~-~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~ 230 (400)
+.+ .+ +.-++++ -| +.-.|.+. +++-++++-++| +++++++|.||+...+.=.|.-+. .-..+.|+
T Consensus 210 ~~~~~~~~~~~iAAvi~-EPiqg~gG~~~p~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD---- 283 (454)
T PRK06918 210 NFFISEVAPETIAAVVM-EPVQGEGGFIVPSKKFVQEVRNIC-SEHGILFVADEIQTGFSRTGKYFAIDHYDVVPD---- 283 (454)
T ss_pred HHHHHHCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEECCCCCCCCCCCCHHHCCCCCCE----
T ss_conf 99986248886689999-688788898668989999999988-564916872011248761357402222798985----
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 574146544322344544422110122687531001222332222222222223467--643222222110000000245
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~ 308 (400)
|+ +++|..+ .|+-+|.+++.+++.+.........+++.+.+...++.+.|+.- ++.+++. ++.-+++.+.
T Consensus 284 -iv--~~gK~lg-~G~Plsav~~~~~i~~~~~~~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~----~~~G~~l~~~ 355 (454)
T PRK06918 284 -LI--TVSKSLG-AGVPISGVIGRKEIMNEAAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRA----IELGKVVMNR 355 (454)
T ss_pred -EE--EECCHHH-CCCCCCCEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHH----HHHHHHHHHH
T ss_conf -99--9772655-89987226521887604688671561798989999999999999866899999----9999999999
Q ss_pred HH----CCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCH
Q ss_conf 53----0477603302740899862641023321133224898999999998739799835022899728999--62999
Q gi|254780602|r 309 LQ----GVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSD 382 (400)
Q Consensus 309 L~----~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~ 382 (400)
|+ +.+.+.-++..|-| +=+++-.......+. .....+++..++ +.||++.++.. .++-+||. +..++
T Consensus 356 L~~l~~~~p~v~~vRG~Gl~-~gvelv~d~~~~~p~---~~~~~~i~~~~~-~~Gll~~~~g~--~~~vlr~~PPL~it~ 428 (454)
T PRK06918 356 FEEMKNKYNCIGDVRGLGAM-CAFELVQDRKTKEPD---KTLTANLCAEAN-KRGLLLLSAGT--YGNVIRVLMPLVITD 428 (454)
T ss_pred HHHHHHCCCCEEEEECCCEE-EEEEEECCCCCCCCC---HHHHHHHHHHHH-HCCCEEEECCC--CCCEEEEECCCCCCH
T ss_conf 99998629986888226479-999995067668977---999999999999-68959984688--999899978822899
Q ss_pred HHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999860
Q gi|254780602|r 383 AILEEACVRIKRFCHSL 399 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l 399 (400)
+++++++++|.+.|++.
T Consensus 429 ~eid~~l~~l~~al~a~ 445 (454)
T PRK06918 429 EQLEEGLTIIEESLQAC 445 (454)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999
No 258
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.41 E-value=2.2e-12 Score=95.51 Aligned_cols=325 Identities=13% Similarity=0.059 Sum_probs=183.3
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCC------CCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999998699726656589749889999999999983887-56998------7789899999999864210133
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTA------VAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~------~~G~~~lR~aia~~~~~~~g~~ 88 (400)
++.+.++-.+.++.+ |+|=..|. + +++.+++++...+.+.. -||+. ..-..++-+...++.++.||.+
T Consensus 8 i~~~i~~E~~rq~~~---l~LIASEN-~-~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~e~iD~iE~la~~rak~lF~a~ 82 (380)
T pfam00464 8 IFDIIKKEKERQREG---IELIASEN-F-TSRAVMEALGSVLTNKYAEGYPGKRYYGGCEYVDEVETLAQDRAKELFGLD 82 (380)
T ss_pred HHHHHHHHHHHHHCC---CEEECCCC-C-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999829---54753777-5-799999985573126465879984334676359999999999999983997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCC--CCCCCCCCCCCCCCCCHHHHHHCCC-C
Q ss_conf 33223323345433332222222332232222333323222---2222222--2222222222232221033310001-2
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP---DMVALCG--GIPVFVDTQQDDNFQVSPEKLEQAI-T 162 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~---~~~~~~g--~~~~~v~~~~~~~~~~d~~~l~~~i-~ 162 (400)
--||=.-+|+ +|...++.++++|||+|+..++.-..|. ......| .+.+++++++++ ..+|.|++++.. .
T Consensus 83 --~anVqp~SGs-~An~av~~all~PGD~il~l~l~~GGHltHg~~~~~~g~~~~~~~Y~~d~~~-~~ID~d~l~~~a~~ 158 (380)
T pfam00464 83 --GVNVQPLSGS-QANLAVYTALLNPGDRIMGLDLPHGGHLTHGYPVNFSGKFFESMPYGVDPDT-GLIDYDQLEKNAKL 158 (380)
T ss_pred --CCCCCCCCHH-HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCEEEEEECCCCCCC-CCCCHHHHHHHHHH
T ss_conf --6351778769-9999999998379998995367777545679865620114677874346454-86689999999997
Q ss_pred CCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 2122012113542100001233-332111223333320111012211-00000122332221112333225741465443
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYE-HIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
.|+|+|++- ++.|++. +++++.++| ++.+.+++.|-+|- .|+-.+ .+++..... -++.+|.-|+
T Consensus 159 ~kPklIi~G------~Say~r~~d~~~~reIa-d~vgA~l~~D~aH~~GLIA~g-~~p~Pl~~A------Dvvt~tTHKT 224 (380)
T pfam00464 159 FKPKLIVAG------TSAYSRLIDYARFREIA-DEVGAYLMVDMAHIAGLVAAG-VIPSPFPYA------HVVTTTTHKT 224 (380)
T ss_pred CCCCEEEEC------CCCCCCCCCHHHHHHHH-HHCCCEEEEEHHHHHHHHHCC-CCCCCCCCC------EEEECCCCCC
T ss_conf 099889987------40043644889999999-750988998637777777424-379954666------5785354566
Q ss_pred CCCCCCCCCCCCCHH---HHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 223445444221101---22687531001222332222222222-22346-76432222221100000002455304776
Q gi|254780602|r 241 YAMTGLRIGYAAGAL---SLIKSMIVLQGQQTSGACSIAQWAAV-EALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~---~li~~l~~~~~~~~~~~~~~~q~a~~-~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~ 315 (400)
| +|-|-|.+..++ ++.+++.+..--...+.+...+.++. .+|.+ ....+.+-.+..-+|.+.+.+.|.+. |+
T Consensus 225 l--rGPrGGiIl~~~~~~e~~~kId~avFPg~qggp~~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~-G~ 301 (380)
T pfam00464 225 L--RGPRGGMIFFREILYELEKKINSAVFPGLQGGPLNHVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKER-GY 301 (380)
T ss_pred C--CCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHC-CC
T ss_conf 7--89985179837837999999714048876677006579999999999848529999999999999999999978-88
Q ss_pred EEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC-CCC-----CCCEEEEEE
Q ss_conf 0330274--08998626410233211332248989999999987397998350-228-----997289996
Q gi|254780602|r 316 RYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGS-SFG-----HGPSIRISY 378 (400)
Q Consensus 316 ~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~-~Fg-----~~~~iRis~ 378 (400)
++.. .| +-.+|+|+... ..+..+ +..+|++.||.+..-. .|. .+..|||.-
T Consensus 302 ~vv~-ggTd~H~vlvdl~~~----------g~~G~~-a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt 360 (380)
T pfam00464 302 KLVS-GGTDNHLVLVDLRPK----------GLDGKR-AEKALERANITANKNTIPGDPKSPFVTSGLRLGT 360 (380)
T ss_pred EECC-CCCCCCEEEEECCCC----------CCCHHH-HHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECC
T ss_conf 3577-999876899977666----------999999-9999997692878885989999998888426577
No 259
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.41 E-value=5.7e-12 Score=92.97 Aligned_cols=352 Identities=14% Similarity=0.111 Sum_probs=173.1
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC-CCCC-CCCCCCCC
Q ss_conf 6997266565897--498-89999999999983887569987789899999999864210133332-2332-33454333
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTS-DQII-VGTGAKHV 103 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~-e~I~-it~G~~~~ 103 (400)
+|++.||+..|-- .+. -.|.|.+|+++.+++... +....-..+.+..+++.+.....-.+.. ..|. .++++++|
T Consensus 61 dG~~yLD~~sg~~~~~lGh~~p~i~~Ai~~ql~~~~~-~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEA 139 (464)
T PRK06938 61 EGRQFIDCLAGAGTLALGHNHPVVIEAIQQVLADELP-LHTLDLTTPVKDQFVQDLFGSLPEAFAKEAKIQFCGPTGTDA 139 (464)
T ss_pred CCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCCC-EEECCCCCHHHHHHHHHHHHHCCHHHHCCCEEEEECCCCHHH
T ss_conf 8899999164088656707959999999999860898-126785868999999999996205553044089847980899
Q ss_pred CCCCCCCCC-CCC-CCCCCCCCCCCCCCCC-CCCCC--------------CCCCCCCC--------CCCCCCCCHHHHHH
Q ss_conf 322222223-322-3222233332322222-22222--------------22222222--------22232221033310
Q gi|254780602|r 104 IFNALMATV-NMG-DEVLIPRPYWVSYPDM-VALCG--------------GIPVFVDT--------QQDDNFQVSPEKLE 158 (400)
Q Consensus 104 l~~~~~~~~-~~G-d~Vlv~~P~y~~y~~~-~~~~g--------------~~~~~v~~--------~~~~~~~~d~~~l~ 158 (400)
+..+++..- ..| ..|+...-+|-..... ....| ...+++|. ..+.....+.+.++
T Consensus 140 vE~AiKlAR~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~~~~~~~~~~~~~~le 219 (464)
T PRK06938 140 VEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLE 219 (464)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999998646798859998347889706556541787555567888999678168864467667761567888899999
Q ss_pred CCCCC------CCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCC
Q ss_conf 00122------1220121135-42100001-23333211122333332011101221100000122332-2211123332
Q gi|254780602|r 159 QAITP------KTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYE 229 (400)
Q Consensus 159 ~~i~~------~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~ 229 (400)
+.+.. ++-++++ -| +.-.|.+. +++-+++|-++| ++||+++|.||+...|.=.|.-+.. -..+.|+
T Consensus 220 ~~i~~~~~g~~~iAAvi~-EpIqg~gGvi~~p~~yl~~lr~lc-~~~giLlI~DEVqtGfGRTG~~fa~e~~gv~PD--- 294 (464)
T PRK06938 220 NLLDDPESGVQLPAAVIL-EVVQGEGGVIPADDEWLRGLRRIT-EEAGIPLIVDEIQSGFGRTGKMFAFEHAGIIPD--- 294 (464)
T ss_pred HHHHHHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCHHHHHCCCCCC---
T ss_conf 997405406882489998-885687798649989999999998-667915986420126774368406432368888---
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 25741465443223445444221101226875310012223322222222222234676432222221100000002455
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L 309 (400)
|+ +++|..+ .|+-+|.++..+++ +.........+.+.+.+...++.+.|+.-++ +...+..++.-+++.+.|
T Consensus 295 --ii--t~gKglg-Gg~Plsavi~~~~i-~~~~~g~h~~T~~gnpla~AaalavL~iie~--e~l~~~a~~~G~~l~~~L 366 (464)
T PRK06938 295 --VV--VLSKAIG-GSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKE--HRLAEHAAAMGERLLEHL 366 (464)
T ss_pred --EE--EECHHCC-CCCCEEEEEECHHH-HHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHH
T ss_conf --79--8630004-87734999982776-5047887487289998999999999999986--449999999999999999
Q ss_pred HC----CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCC---HHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EEC
Q ss_conf 30----47760330274089986264102332113322489---8999999998739799835022899728999--629
Q gi|254780602|r 310 QG----VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRT---DLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAV 380 (400)
Q Consensus 310 ~~----~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~ 380 (400)
++ .|.+.=++.. |+++=+++-+.............+ ...+...++ +.|+++.++... .+-||+. +..
T Consensus 367 ~~l~~~~p~V~dVRG~-GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l-~~Gll~~~~g~~--g~virl~PPL~i 442 (464)
T PRK06938 367 RQLQRDYPQLGDVRGR-GLMLGVEIVDPQGEPDALGHPPANGELASRIQRECL-RRGLILELGGRH--GSVVRFLPPLII 442 (464)
T ss_pred HHHHHCCCCEEEEECC-CEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEECCCC--CCEEEEECCCCC
T ss_conf 9998539987976416-069999984166664433356555899999999999-789289646889--998999799128
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999986
Q gi|254780602|r 381 SDAILEEACVRIKRFCHS 398 (400)
Q Consensus 381 ~~e~l~~al~rl~~~l~~ 398 (400)
+++++++++++|++.|+.
T Consensus 443 t~eeid~~~~~l~~al~~ 460 (464)
T PRK06938 443 TAEQIDEVAEIFAEAVYA 460 (464)
T ss_pred CHHHHHHHHHHHHHHHHH
T ss_conf 899999999999999999
No 260
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.41 E-value=3.1e-14 Score=106.76 Aligned_cols=168 Identities=17% Similarity=0.241 Sum_probs=106.6
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98999999998642101333322332334543333222222233223222233332322222222222222222222232
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDN 149 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 149 (400)
..+..+..|+.| |.+ .-.+++||++.++..++.++|+|||+|+++.-+--.....+.+.|++|+++... .+.
T Consensus 68 I~eAq~~aA~~f----ga~---~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv~~al~l~g~~Pvyl~p~-~~~ 139 (417)
T pfam01276 68 IKEAQKYAARVF----GAD---KSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSIHHALMMSGATPVYLEPT-RNA 139 (417)
T ss_pred HHHHHHHHHHHH----CCC---CEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCC-CCC
T ss_conf 999999999983----999---369984683099999999743899989971641899999999869858995364-243
Q ss_pred CC---------CHHHHHHCCCCCC--CC---CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCCCCC
Q ss_conf 22---------1033310001221--22---012113542100001233332111223333320111012211-000001
Q gi|254780602|r 150 FQ---------VSPEKLEQAITPK--TK---WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-HIVYRN 214 (400)
Q Consensus 150 ~~---------~d~~~l~~~i~~~--~k---~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~ 214 (400)
|. ++++.+++++.+. .| +++|+|| |=-|.+++ +++|++.| +++++.|++||||. ++.|..
T Consensus 140 ~gi~~~i~~~~~~~e~~~~~l~~~p~~k~~~~v~lt~P-tY~G~~~d---i~~i~~~~-h~~~~~llvDEAhGah~~F~p 214 (417)
T pfam01276 140 YGIIGGIPLHEFQEETIKEALAEVPPAKGPRLAVITNG-TYDGTIYN---AKEIVDTL-GHLSDYILFDSAWVGYEQFIP 214 (417)
T ss_pred CCCCCCCCHHHCCHHHHHHHHHHCCCCCCCEEEEEECC-CCCEEEEC---HHHHHHHH-HHCCCEEEEECCCCCCCCCCC
T ss_conf 46615888254599999999985876568508999899-98706528---99999998-633987999788752024687
Q ss_pred CCCCCCCCCCCC--CCCEEEEECCCCCCCCCCCCCCC-CCCC
Q ss_conf 223322211123--33225741465443223445444-2211
Q gi|254780602|r 215 CQFSNIVNVEPS--LYERTLVVNGVSKAYAMTGLRIG-YAAG 253 (400)
Q Consensus 215 ~~~~s~~~~~~~--~~~~~i~~~S~SK~~~~~G~RiG-~~v~ 253 (400)
- +.+......+ ...-++++.|.-|+. |++.-+ |+..
T Consensus 215 l-p~~a~~~gad~~~~~~~~vvqS~HKtL--~altQ~s~Lh~ 253 (417)
T pfam01276 215 I-YADASPMGGDNVNDPGIIVTQSVHKLL--AAFSQASQIHK 253 (417)
T ss_pred C-CHHHHHCCCCCCCCCCEEEEEEHHHCC--CCCCHHHHHHH
T ss_conf 8-334665678866677227986111135--43043432121
No 261
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.40 E-value=2.5e-13 Score=101.21 Aligned_cols=202 Identities=18% Similarity=0.288 Sum_probs=139.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 223323345433332222222332232222333323222----2222222222222222223222103331000122122
Q gi|254780602|r 91 SDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP----DMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 91 ~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
.|--+-|..+..||..++..++..||+||+.+--|.+-. ...+.+|.++.+++++ .++++.+.+.++||
T Consensus 74 ~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~f~~~~-------~pee~~a~i~dnT~ 146 (392)
T TIGR01328 74 AEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVKFVDMA-------SPEEVKAAIKDNTK 146 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEEEECCC-------CHHHHHHHCCCCCE
T ss_conf 46778875128999999999985287577438742014899873267737527983178-------77999984489977
Q ss_pred CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC-
Q ss_conf 0121135421000012333321112233333201110122110000012233222111233322574146544322344-
Q gi|254780602|r 167 WLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG- 245 (400)
Q Consensus 167 ~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G- 245 (400)
.||+-+|-|||=.+++-+ .+++++..+.++.||+|..|.-=+. +....+ ..-|+++|.+|..+-=|
T Consensus 147 ivYfETPaNPtm~liD~e---~v~r~A~~~gG~kVivDNTfatP~l-----t~P~al-----G~D~VVHSATKYigGHgD 213 (392)
T TIGR01328 147 IVYFETPANPTMKLIDLE---LVVRVAHEKGGVKVIVDNTFATPYL-----TRPVAL-----GVDVVVHSATKYIGGHGD 213 (392)
T ss_pred EEEEECCCCCCHHHHHHH---HHHHHHHHCCCEEEEEECCCCCHHH-----CCHHHC-----CCCEEEECCCCCCCCCHH
T ss_conf 999865998752577599---9999997529828998566277001-----380361-----877689424121376122
Q ss_pred CCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 5444221101226875310--0122233222222222222346764322222211000000024553047760
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIVL--QGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
+=-|.+++..+.+.+++.. ++.+.+-.|++..+..++.|.. +.-.-++--++.+.+.+.|++.|.++
T Consensus 214 vVaG~~~G~~e~~q~iR~~g~KD~tG~ViSPfdAwL~lRGLkT----L~~RM~rhsenA~kvAe~Lk~HPaVe 282 (392)
T TIGR01328 214 VVAGVLIGDAELLQRIRLVGVKDMTGAVISPFDAWLVLRGLKT----LAVRMKRHSENAEKVAEYLKEHPAVE 282 (392)
T ss_pred HHHHHHCCCHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 1122110775667440111100056650055789999743667----77888773053899999852388602
No 262
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.40 E-value=1.4e-11 Score=90.58 Aligned_cols=322 Identities=16% Similarity=0.162 Sum_probs=176.5
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|++.||+..|.- .+. -+|.|.+|+.+.+++.. .+.+...+ +.+..+++.+.+.. +-+.|.+++++++|..
T Consensus 22 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~ql~~~~-~~~~~~~~-~~~~~l~~~l~~~~----~~~~v~f~~SGseAve 95 (364)
T PRK04013 22 QGRRYLDLIAGIGVNVLGHNHPEWVEEMSEQLEKLV-VAGPMFEH-EEKEEMLEELSKWV----NYEYVYMGNSGTEAVE 95 (364)
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCCCCC-HHHHHHHHHHHHCC----CCCEEEECCCHHHHHH
T ss_conf 979999957527765654898899999999997557-65776365-89999999975257----9788996388469999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCCC-CCCCCC---CCCCCCCCCCCC--CCHHHHHHCCCCCCCCCEEECCC-CCC
Q ss_conf 222222-3322-32222333323222222-222222---222222222322--21033310001221220121135-421
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDMV-ALCGGI---PVFVDTQQDDNF--QVSPEKLEQAITPKTKWLFLNSP-SNP 176 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~~-~~~g~~---~~~v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l~nP-~NP 176 (400)
.+++.- ...| .+|+...-+|-...... ...+.. ..+-|+.++-.. ..|.+++++.+..++.++++ -| +.-
T Consensus 96 ~AiklAr~~tgr~~ii~~~~~yHG~t~g~ls~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~iAavi~-EPi~g~ 174 (364)
T PRK04013 96 AALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIF-EPIQGE 174 (364)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCEEEEE-ECCCCC
T ss_conf 9999987627999899964886778666334457733345778998870555764399999872667359999-767778
Q ss_pred CCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 00001-2333321112233333201110122110000012233-222111233322574146544322344544422110
Q gi|254780602|r 177 SGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 177 TG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
.|.+. +++-++++-++| +++|+++|.||+...+. .|.-+. ....+.|+ |++ ++|.++ .|+.+|.++++
T Consensus 175 ~G~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfR-tG~~~a~e~~gv~PD-----iv~--~gKglg-gG~Pl~av~~~ 244 (364)
T PRK04013 175 GGIVPAKEEFVKTLRDLT-EDVGALLIADEVQSGLR-TGKFLAIEHYKVEPD-----IVT--MGKGIG-NGVPVSLTLTN 244 (364)
T ss_pred CCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCC-CCCCCHHHCCCCCCC-----EEE--ECCCCC-CCCCCEEEEEC
T ss_conf 886248779999999999-97699767102303604-343023115899998-----999--634000-88651899964
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCC
Q ss_conf 122687531001222332222222222223467--643222222110000000245530477603302740899862641
Q gi|254780602|r 255 LSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQD 332 (400)
Q Consensus 255 ~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~ 332 (400)
.++... .+. .+.+.+.+...++.+.|+-- +..+++. ++.+.+ ++. +.+.-.+.. |+++=+++..
T Consensus 245 ~~i~~~---~h~-~T~~Gnp~~~aaa~a~L~ii~~e~l~~~~-------~~~~~~-~~~-~~v~~vRG~-GL~~gie~~~ 310 (364)
T PRK04013 245 FDVERG---KHG-STFGGNPLACKAVAVTLRILRRERLVEKA-------GEKFIE-IKG-ERVVTTRGR-GLMIGIVLKK 310 (364)
T ss_pred CCCCCC---CCC-CCCCCCHHHHHHHHHHHHHHHHCHHHHHH-------HHHHHH-HCC-CCEEEEECC-CEEEEEEECC
T ss_conf 101137---656-75588989999999999999866399999-------999998-565-700898615-3799999778
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 023321133224898999999998739799835022899728999--6299999999999999999860
Q gi|254780602|r 333 LIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
....++..+ .+.|+++.++. ++-||+. +..+++++++++++|.+.++.+
T Consensus 311 -------------p~~~~~~~~-~~~G~l~~~~g----~~virl~PPL~it~~eid~~~~~l~~al~ev 361 (364)
T PRK04013 311 -------------PVGKYVEEL-QNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred -------------CHHHHHHHH-HHCCEEEEECC----CCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf -------------489999999-95996996379----9989998881378999999999999999998
No 263
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.39 E-value=3.5e-12 Score=94.23 Aligned_cols=344 Identities=14% Similarity=0.131 Sum_probs=176.0
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|. ..+. -+|.|.+|+++.++... .|+.+.-.-+.+.++|+.+.+....+. ...|++++++++|..
T Consensus 53 dG~~ylD~~~g~~~~~lGh~~p~i~~Av~~Q~~~l~-~~~~~~~~~~~~~elae~L~~~~p~~~-~~~v~f~~sGSEAvE 130 (442)
T PRK05769 53 DGNVYLDFNSGIAVTNVGHAHPKVVEAIKEQAEKFL-HYSLTDFYYEPAVELAERLVEIAPGGF-PKKVFFTNSGTESNE 130 (442)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHCCCCC-CCEEEEECCHHHHHH
T ss_conf 869999925447741344897999999999986176-745677688899999999998578666-757998186778999
Q ss_pred CCCCCCC-CCC-CCCCCCCCCCCCCCC-CCCCCC---------------CCCCCCCCCCCCCC---------CCHHHHHH
Q ss_conf 2222223-322-322223333232222-222222---------------22222222222322---------21033310
Q gi|254780602|r 106 NALMATV-NMG-DEVLIPRPYWVSYPD-MVALCG---------------GIPVFVDTQQDDNF---------QVSPEKLE 158 (400)
Q Consensus 106 ~~~~~~~-~~G-d~Vlv~~P~y~~y~~-~~~~~g---------------~~~~~v~~~~~~~~---------~~d~~~l~ 158 (400)
.++...- ..| ..|+...-+|-.... .....| ...+++|......| .-.++.++
T Consensus 131 ~AiklAr~~tgr~~ii~~~~syHG~t~ga~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~le 210 (442)
T PRK05769 131 AAIKLARYYTGRKYIIAFLGAFHGRTYGSMSLTASKPVQRRGFFPLMPGVIHVPYPNPYRNPFGYENPEELGNAVLDFIE 210 (442)
T ss_pred HHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999898659986997248677886336532078301104778999992780789734565577898999999999999
Q ss_pred CCC-----CC-CCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 001-----22-1220121135-421000-012333321112233333201110122110000012233-22211123332
Q gi|254780602|r 159 QAI-----TP-KTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYE 229 (400)
Q Consensus 159 ~~i-----~~-~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~ 229 (400)
+.+ .+ +..++++ -| +--.|. +.+++-++++.++| +++|+++|.||+...+.-.|.-+. .-..+.|+
T Consensus 211 ~~i~~~~~~~~~iAavi~-EPv~g~gG~~~p~~~yl~~l~~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD--- 285 (442)
T PRK05769 211 DYLFKTLVPPEEVAAIFF-EPIQGEGGYVVPPKNFFKELRKLA-DKYGILLIVDEVQTGFGRTGKMFAIEHFGVEPD--- 285 (442)
T ss_pred HHHHHHCCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCCHHHCCCCCCC---
T ss_conf 999873589897899999-897778897068989998999999-874935871110127775566213104677888---
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 25741465443223445444221101226875310012223322222222222234676432222221100000002455
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQL 309 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L 309 (400)
|+ +++|..+ .|+-+|.+++.+++.....-.+. .+.+.+.+...++.+.|+--++ +..+..+++-+++.+.|
T Consensus 286 --iv--~~gK~lg-gG~Plsav~~~~~i~~~~~g~h~-~T~~g~pl~~aaa~a~L~~lee---~l~~~v~~~G~~l~~~L 356 (442)
T PRK05769 286 --II--TLAKAIA-GGLPLGAVIGRAELMFLPPGSHA-NTFGGNPVAAAAALATLELIEE---GLLENAARLGEYLLKRL 356 (442)
T ss_pred --EE--EECCHHC-CCCCEEEEEECHHHHCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_conf --89--9740103-88740899980675037778715-1899867999999999999988---89999999999999999
Q ss_pred HCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHH
Q ss_conf 304----77603302740899862641023321133224898999999998739799835022899728999--629999
Q gi|254780602|r 310 QGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDA 383 (400)
Q Consensus 310 ~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e 383 (400)
+++ +-+.-.+..| +++=+++-+... .+. .....+++..++ +.||++.|.. .+.||++ +..+++
T Consensus 357 ~~l~~~~p~v~~vRG~G-l~~giel~~~~~--~~~---~~~~~~~~~~~~-~~Gvl~~~~g----~~~i~~~PpL~it~~ 425 (442)
T PRK05769 357 TELKEEYEFIGDVRGLG-LMIGVELVKDRK--EPD---PKLRDKVLREAF-KRGLLLLGAG----KSAIRIIPPLVITEE 425 (442)
T ss_pred HHHHHHCCCEEEECCCC-EEEEEEEECCCC--CCC---HHHHHHHHHHHH-HCCEEEEECC----CCEEEEECCCCCCHH
T ss_conf 99986299867603434-599999815777--879---999999999999-6995993179----997999799469999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999999860
Q gi|254780602|r 384 ILEEACVRIKRFCHSL 399 (400)
Q Consensus 384 ~l~~al~rl~~~l~~l 399 (400)
++++++++|.+.++++
T Consensus 426 eid~~~~~l~~al~ev 441 (442)
T PRK05769 426 EADTGLEILEEAIKEV 441 (442)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999986
No 264
>PRK06062 hypothetical protein; Provisional
Probab=99.39 E-value=8.4e-12 Score=91.94 Aligned_cols=347 Identities=15% Similarity=0.144 Sum_probs=178.9
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|-- .+. -+|.|.+|+++.++... .+.+.- ..+.+..+++.+.+... -.-+++.++++++++..
T Consensus 34 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~-~~~~~~-~~~~~~~la~~l~~~~p--~~~~~v~f~~SGsEAve 109 (434)
T PRK06062 34 EGNRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLC-TVAPAH-ANDARSEAARLIAERAP--GDLSKVFFTNGGADANE 109 (434)
T ss_pred CCCEEEEECHHHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCCC-CCHHHHHHHHHHHHHCC--CCCCEEEEECCCHHHHH
T ss_conf 789999860617867656897999999999997547-646752-45999999999997477--77587998378438999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCCC-CCCC-------------CCCCCCCCCCCCCC---------CCHHHHHHCC
Q ss_conf 222222-3322-32222333323222222-2222-------------22222222222322---------2103331000
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDMV-ALCG-------------GIPVFVDTQQDDNF---------QVSPEKLEQA 160 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~~-~~~g-------------~~~~~v~~~~~~~~---------~~d~~~l~~~ 160 (400)
.+++.- ...| ..|+...-+|-.....+ ...| ....+.|......| .-.++.+++.
T Consensus 110 ~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~l~~~ 189 (434)
T PRK06062 110 HAVRMARLHTGRPKVLSAYRSYHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTEEEECERALAHLERV 189 (434)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 99999998529983766404667886520784068201468888899534158876676677888689999999999999
Q ss_pred CC----CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEE
Q ss_conf 12----21220121135-42100001-2333321112233333201110122110000012233-222111233322574
Q gi|254780602|r 161 IT----PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLV 233 (400)
Q Consensus 161 i~----~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~ 233 (400)
+. .++-+|++ -| +.-.|.+. +++.++++.++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+
T Consensus 190 i~~~~~~~iAAviv-EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~TG~GRtG~~fa~e~~gv~PD-----iv 262 (434)
T PRK06062 190 IALEGPSTIAAIVL-ESVPGTAGIMVPPPGYLAGVRELC-DRHGIVFIADEVMAGFGRTGKWFAIEHFDVVPD-----LI 262 (434)
T ss_pred HHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC-----HH
T ss_conf 98519997799994-786788998668767876899999-985950674643227876666421005897976-----21
Q ss_pred ECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 146544322344-5444221101226875310--01222332222222222223467--643222222110000000245
Q gi|254780602|r 234 VNGVSKAYAMTG-LRIGYAAGALSLIKSMIVL--QGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 234 ~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~ 308 (400)
.++|..+ .| .-+|.+++.+++.+.+..- ....+.+.+.+...++.+.|+.- ++.+++.++.- .+++.+.
T Consensus 263 --~~gK~l~-gG~~Plsav~~~~~i~~~~~~~~~~~g~T~~Gnpla~Aaa~a~L~~i~~~~l~~~~~~~G---~~~l~~~ 336 (434)
T PRK06062 263 --TFAKGVN-SGYVPLGGVAISEAIADTFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIG---AEVLGPG 336 (434)
T ss_pred --EEHHHHC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHH---HHHHHHH
T ss_conf --0103314-887761788745999987422675678788898799999999999997358999999999---9999999
Q ss_pred HHC----CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCH---HHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EE
Q ss_conf 530----477603302740899862641023321133224898---999999998739799835022899728999--62
Q gi|254780602|r 309 LQG----VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTD---LDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YA 379 (400)
Q Consensus 309 L~~----~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~---~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~ 379 (400)
|++ .|-+.-++..|-| +=+++-+......+........ ..+... +.++||++.+. .+.||+. +.
T Consensus 337 L~~l~~~~p~v~~VRG~GL~-~gielv~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~Gll~~~~-----gn~irl~PpL~ 409 (434)
T PRK06062 337 LRELAERHPSVGEVRGLGVF-WALELVADRETREPLVPYGAASAAMAAVVAA-CKERGLLPFVN-----GNRIHVVPPCT 409 (434)
T ss_pred HHHHHHHCCCEEEEEECCEE-EEEEEECCCCCCCCCCCCCCCHHHHHHHHHH-HHHCCCEEEEC-----CCEEEEECCCC
T ss_conf 99998658986888616626-9999822644355555443327999999999-99799278335-----99899978923
Q ss_pred CCHHHHHHHHHHHHHHHHHC
Q ss_conf 99999999999999999860
Q gi|254780602|r 380 VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 380 ~~~e~l~~al~rl~~~l~~l 399 (400)
.+++++++++++|++.|..+
T Consensus 410 it~~eid~~l~~l~~al~~~ 429 (434)
T PRK06062 410 VTEDEVREGLAILDAALAVA 429 (434)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 88999999999999999987
No 265
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.39 E-value=3.7e-13 Score=100.24 Aligned_cols=310 Identities=15% Similarity=0.149 Sum_probs=175.9
Q ss_pred CCHH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------
Q ss_conf 8999-99999999838875699877898999999998642101333322332334543333222222233----------
Q gi|254780602|r 45 MPEN-VKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVN---------- 113 (400)
Q Consensus 45 ~p~~-i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~---------- 113 (400)
.|+. +-+.+..+++.....|..+++.-++-+.+.+|+.+..|.+-+...=++|+|++++...++.+--+
T Consensus 10 ~~~~~l~d~l~~~~n~~~~~~~~sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~~ 89 (345)
T cd06450 10 DPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG 89 (345)
T ss_pred CHHHHHHHHHHHCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89999999999621767876434858999999999999998389977887698275689999999999999988887416
Q ss_pred -CC-C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC------CCCEEECCCCCCCCCCCCC
Q ss_conf -22-3--222233332322222222222222222222232221033310001221------2201211354210000123
Q gi|254780602|r 114 -MG-D--EVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK------TKWLFLNSPSNPSGVVYSQ 183 (400)
Q Consensus 114 -~G-d--~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------~k~i~l~nP~NPTG~v~s~ 183 (400)
.+ . .|++.+-.-......+...|..++.+|++++. .+|++.|++.|.+. +=+|+-+-..-.||.+
T Consensus 90 ~~~~~~~~v~~s~~aH~Sv~KAa~ilg~~~~~vp~d~~~--~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai--- 164 (345)
T cd06450 90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDEDG--RMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI--- 164 (345)
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCC--CCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC---
T ss_conf 778887699988975289999999748976997539998--088999999999998669973899955787676256---
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33321112233333201110122110000012233222111233322574146544322344544422110122687531
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
+.+++|.++| +++++|+-+|.+|..+..--.++.....-.+. -..|++ .+.|...+| +-+|++.. +
T Consensus 165 D~l~~i~~i~-~~~~iwlHVDaA~GG~~~~~~~~~~~~~gie~--aDSit~-d~HK~l~~p-~~~~~~l~-----r---- 230 (345)
T cd06450 165 DPLEEIADLA-EKYDLWLHVDAAYGGFLLPFPEPRHLDFGIER--VDSISV-DPHKYGLVP-LGCSAVLV-----R---- 230 (345)
T ss_pred CCHHHHHHHH-HHCCCCEEEECHHCCHHHCCCCCCHHHCCCCC--CCEEEE-CCHHCCCCC-CCCEEEEH-----H----
T ss_conf 7899999999-98499477510001201106220076579999--888998-812224878-88268861-----8----
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-CCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 00122233222222222222346764322222211000000024553047760330-27408998626410233211332
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI-PDGAFYLYPSCQDLIGKKSPSGD 342 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~-p~g~~y~~~~~~~~~~~~~~~~~ 342 (400)
.+-.+.....+ +.+-+.+..+..-+..+++.+.+++.+++++.. |+=+.-+|--.+ ...
T Consensus 231 ----------alklw~~l~~~--G~~g~~~~i~~~~~~a~~l~~~l~~~~~~el~~~p~l~iV~Fr~~~--------~~~ 290 (345)
T cd06450 231 ----------ALKLWATLRRF--GRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKP--------SVK 290 (345)
T ss_pred ----------HHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECC--------CHH
T ss_conf ----------88999999999--8999999999999999999999962989899669965899999768--------201
Q ss_pred CCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE---CCHHHHHHHHHHHHH
Q ss_conf 2489899999999873979983502289972899962---999999999999999
Q gi|254780602|r 343 VIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA---VSDAILEEACVRIKR 394 (400)
Q Consensus 343 ~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~---~~~e~l~~al~rl~~ 394 (400)
......++.++|.++.+..+ +.+..+...++|++++ ++++.+++-++.|++
T Consensus 291 ~d~~~~~l~~~l~~~g~~~v-s~t~~~g~~~lR~~i~n~~tt~~di~~l~~~i~~ 344 (345)
T cd06450 291 LDELNYDLSDRLNERGGWHV-PATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CCHHHHHHHHHHHHCCCEEE-EEEEECCEEEEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 14899999999981399998-6159999789999979999999999999999974
No 266
>PRK06541 hypothetical protein; Provisional
Probab=99.38 E-value=9.1e-12 Score=91.74 Aligned_cols=351 Identities=13% Similarity=0.115 Sum_probs=179.1
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|++.+|+..|-- .+. -+|.|.+|+++.+++..+ .+.....-+.+..+|+.+.+... -+-+.|.++++++++..
T Consensus 50 dG~~ylD~~~g~~~~~lGH~hp~v~~Ai~~Q~~~l~~-~~~~~~~~~~~~~lae~L~~~~p--~~l~~v~f~~SGsEA~E 126 (460)
T PRK06541 50 RGKRYLDGLAGLFVVQVGHGRAELAEAAAEQAGTLAF-FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSEAVE 126 (460)
T ss_pred CCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHHHCCC-CCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf 9999999651487531178989999999999975787-56775578799999999997488--88698997087489999
Q ss_pred CCCCCCC-------CCCC-CCCCCCCCCCCCCCC-CCCCCC---C---------CCCCC------CCCCC----CC-CCH
Q ss_conf 2222223-------3223-222233332322222-222222---2---------22222------22223----22-210
Q gi|254780602|r 106 NALMATV-------NMGD-EVLIPRPYWVSYPDM-VALCGG---I---------PVFVD------TQQDD----NF-QVS 153 (400)
Q Consensus 106 ~~~~~~~-------~~Gd-~Vlv~~P~y~~y~~~-~~~~g~---~---------~~~v~------~~~~~----~~-~~d 153 (400)
.+++.-- ++|. +||...-+|-..... ....|. + ...+| ....+ .+ ...
T Consensus 127 ~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~~~~~~~~~~~~~~~ 206 (460)
T PRK06541 127 SAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRAPEHGDDPEAFGRWA 206 (460)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 99999999999619998618999668716786578875188000378878899916768886445776789988999999
Q ss_pred HHHHHCCCCC----CCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3331000122----1220121135-42100001-2333321112233333201110122110000012233-22211123
Q gi|254780602|r 154 PEKLEQAITP----KTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~~----~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
.+.+++.+.. ++-++++ -| ++-.|.+. +++.+++|-++| +++|+++|.||+...|.=.|.-+. .-..+.|+
T Consensus 207 ~~~~~~~i~~~~~~~iAavI~-EPi~g~gG~~~~~~~fl~~lr~lc-~~~gillI~DEVqtGfGRtG~~fa~e~~gv~PD 284 (460)
T PRK06541 207 ADRIEEAIEFEGPDTVAAVFL-EPVQNAGGCFPPPPGYFERVREIC-DRYDVLLVSDEVICAFGRLGEMFGCERFGYVPD 284 (460)
T ss_pred HHHHHHHHHHCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEECCCCEECCCCCCCCCHHCCCCCCCC
T ss_conf 999999998519985789984-577787886568689999999974-647953766751207865337322016894895
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf 3322574146544322344-54442211012268753100----1222332222222222223467--643222222110
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ----GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFE 299 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~ 299 (400)
+-+++|.++ .| .-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- ++.++ ..+
T Consensus 285 -------iv~~gKglg-~G~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~avL~~i~~~~l~~----~v~ 352 (460)
T PRK06541 285 -------IITCAKGIT-SGYSPLGAMIASDRLVEPFLDGKTMFLHGYTFGGHPVSAAVALANLDIFEREGLLD----HVR 352 (460)
T ss_pred -------HHHHHHHCC-CCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHH
T ss_conf -------141223125-88777046740399987652688531357678889899999999999998657999----999
Q ss_pred CCCCCHHHHHHC---CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCC--HHHHHHHHHHHCCEEEECCCCCCCCCEE
Q ss_conf 000000245530---47760330274089986264102332113322489--8999999998739799835022899728
Q gi|254780602|r 300 YRRDLCVAQLQG---VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRT--DLDFVNGLLEIEKVAVVQGSSFGHGPSI 374 (400)
Q Consensus 300 ~~r~~~~~~L~~---~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ll~~~gV~v~pG~~Fg~~~~i 374 (400)
++-+++.+.|++ .|-+.=++.. |+++=+++-.-.....+....... -..+....+.++|+.+.+.... ++-|
T Consensus 353 ~~G~~l~~~L~~l~~~p~v~dVRG~-GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~~~--~~vi 429 (460)
T PRK06541 353 DNEPAFRATLEKLLDLPIVGDVRGD-GYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRG--DPVV 429 (460)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECC-CEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCC--CCEE
T ss_conf 9999999999997469977874107-738999954576545667646778999999999999789599745899--9889
Q ss_pred EEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 999--6299999999999999999860
Q gi|254780602|r 375 RIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 375 Ris--~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+. +..+++++++++++|++.|+..
T Consensus 430 rl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 430 QLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred EEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 997893378999999999999999999
No 267
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.38 E-value=5.8e-12 Score=92.92 Aligned_cols=336 Identities=15% Similarity=0.138 Sum_probs=180.7
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897--498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|-- .+. -+|.|.+|+++.+++..+ |+... ..+.+..+|+.+.....- .-+.+++++++++|..
T Consensus 73 dG~~YLD~~sG~~~~~lGH~hp~I~~Ai~~Ql~~~~~-~s~~~-~~~~~~~lae~L~~~~P~--~~~~vff~nSGSEAvE 148 (442)
T TIGR03372 73 QGNEFIDCLGGFGIFNVGHRNPNVIAAVENQLAKQPL-HSQEL-LDPLRALLAKTLAALTPG--KLKYSFFCNSGTESVE 148 (442)
T ss_pred CCCEEEECCHHHHHHHCCCCCHHHHHHHHHHHHHCCC-EECCC-CCHHHHHHHHHHHHHCCC--CCCEEEECCCCHHHHH
T ss_conf 8999888456388510067989999999999723683-01444-568999999999974788--8787986388679999
Q ss_pred CCCCCC---C-CCCC-CCCCCCCCCCCCCC-CCCCCCCCCC---CCCCCCCCCCC--CHHHHHHCCCC------CCCCCE
Q ss_conf 222222---3-3223-22223333232222-2222222222---22222223222--10333100012------212201
Q gi|254780602|r 106 NALMAT---V-NMGD-EVLIPRPYWVSYPD-MVALCGGIPV---FVDTQQDDNFQ--VSPEKLEQAIT------PKTKWL 168 (400)
Q Consensus 106 ~~~~~~---~-~~Gd-~Vlv~~P~y~~y~~-~~~~~g~~~~---~v~~~~~~~~~--~d~~~l~~~i~------~~~k~i 168 (400)
.++... . ..|. .|+....+|-.-.. .....|.... +.|+.+.-.+. .|.+.+++.+. +++.++
T Consensus 149 ~AiKlAr~y~~~~Gk~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~~~~~iAav 228 (442)
T TIGR03372 149 AALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAI 228 (442)
T ss_pred HHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 99999999732689818999916778747570302478433578878999825557899999999999887559978999
Q ss_pred EECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 21135-4210000-12333321112233333201110122110000012233-222111233322574146544322344
Q gi|254780602|r 169 FLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 169 ~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
++ -| +--.|.+ .+++.+++|.++| +++++++|.||+...+.=.|.-+. .-..+.|+ +-+++|.++-.+
T Consensus 229 ii-EPiqg~gG~~~p~~~yl~~lr~lc-~~~gvllI~DEVqtGfGRTG~~fa~e~~gV~PD-------Ivt~gKgLggG~ 299 (442)
T TIGR03372 229 IL-EPIQGEGGVILPPEGYLPAVRALC-DEFGALLILDEVQTGMGRTGKMFACEHEGVQPD-------ILCLAKALGGGV 299 (442)
T ss_pred EE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCC-------HHHHHHHHCCCC
T ss_conf 98-467777787449999999999999-984970323621227984778337654899997-------686545415887
Q ss_pred CCCCCCCCHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CC-CE
Q ss_conf 544422110122687531--001222332222222222223467--6432222221100000002455304----77-60
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIV--LQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PG-IR 316 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g-~~ 316 (400)
+-+|.+++.+++.+.+.. .....+.+.+++...++++.|+.- ++.++ ..+++.+++.+.|+++ |. +.
T Consensus 300 ~Pi~av~~~~~i~~~~~~~~~~h~sTf~Gnpla~aaalavL~~i~~~~l~~----~~~~~G~~l~~~L~~L~~~~p~~V~ 375 (442)
T TIGR03372 300 MPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPA----QAAIKGDFLLDGFQQLAAEYPDLII 375 (442)
T ss_pred CCEEEEEECHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 762689750999877624897547888989999999999999998656999----9999999999999999876878166
Q ss_pred EEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHH
Q ss_conf 3302740899862641023321133224898999999998739799835022899728999--62999999999999999
Q gi|254780602|r 317 YMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKR 394 (400)
Q Consensus 317 ~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~ 394 (400)
-.+.. |+++=+++.+ ......++..++ +.||++...- +..+-|||. +..++|++++++++|++
T Consensus 376 dVRG~-GLm~giE~~~-----------~~~~~~~~~~~~-~~gvl~~~~~--~~~~~iri~PPL~it~eeid~~i~~l~~ 440 (442)
T TIGR03372 376 EARGK-GLLMAIEFRD-----------NEIGYAFAKELF-QQNILVAGTL--NNAKSIRIEPPLTITIEQCALVIKAAKD 440 (442)
T ss_pred EEEEC-CEEEEEEECC-----------CHHHHHHHHHHH-HCCCEEEECC--CCCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 85645-3899999788-----------167999999999-7897998558--9989899988950899999999999998
Q ss_pred HH
Q ss_conf 99
Q gi|254780602|r 395 FC 396 (400)
Q Consensus 395 ~l 396 (400)
.|
T Consensus 441 aL 442 (442)
T TIGR03372 441 AL 442 (442)
T ss_pred HC
T ss_conf 69
No 268
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.38 E-value=1e-11 Score=91.47 Aligned_cols=345 Identities=14% Similarity=0.126 Sum_probs=173.1
Q ss_pred CCCCEEECCCCC--C--CCCCCHHHHHHHHHHHHCCC----CCCCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCC
Q ss_conf 699726656589--7--49889999999999983887----569987789899999999864210133---332233233
Q gi|254780602|r 29 KGIDVLCLTAGE--P--DFDMPENVKYAVVRAMERGE----TKYTAVAGISPLREAIVEKFRRDNDLH---YTSDQIIVG 97 (400)
Q Consensus 29 ~g~~ii~l~~G~--p--~~~~p~~i~~a~~~al~~~~----~~Y~~~~G~~~lR~aia~~~~~~~g~~---~~~e~I~it 97 (400)
+|+..+|+..|- . .+. .|.|.+|+.+.+++-. .+|+. +. ...+|+.+.+..... -.-+.|+++
T Consensus 62 dG~~yLD~~sg~~~~~lGh~-~p~i~~Ai~~Q~~~l~~~~~~~~~~----~~-~~~Lae~L~~~~P~~~~~~~l~~Vff~ 135 (472)
T PRK08742 62 DGRRYLDAVSSWWTNLFGHA-EPRIGAAIAAQAGELEQVMLAGFTH----EP-AVQLAERLLAIAPRQPGRAPLSKVFYA 135 (472)
T ss_pred CCCEEEECCCCHHHHCCCCC-CHHHHHHHHHHHHHCCCCCCCCCCC----HH-HHHHHHHHHHHCCCCCCCCCCCEEEEC
T ss_conf 99999886644896475579-8999999999997666601377677----18-999999999857344566776879971
Q ss_pred CCCCCCCCCCCCCC-------CCCCC-CCCCCCCCCCCCCCCC-CCCCC------------CCCCCCCC------C---C
Q ss_conf 45433332222222-------33223-2222333323222222-22222------------22222222------2---2
Q gi|254780602|r 98 TGAKHVIFNALMAT-------VNMGD-EVLIPRPYWVSYPDMV-ALCGG------------IPVFVDTQ------Q---D 147 (400)
Q Consensus 98 ~G~~~~l~~~~~~~-------~~~Gd-~Vlv~~P~y~~y~~~~-~~~g~------------~~~~v~~~------~---~ 147 (400)
++++++...+++.. ..++. .|+...-+|-.-...+ ...|. ....+|.. . .
T Consensus 136 ~SGSEAvE~AiKlA~~y~~~rg~~~r~~ii~~~~~YHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 215 (472)
T PRK08742 136 DNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALSVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSA 215 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCH
T ss_conf 86689999999999999995399877158730587888727656515883225677787888456589975346788877
Q ss_pred CCCC-CHHHHHHCCCCC---CCCCEEECCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-C
Q ss_conf 3222-103331000122---1220121135--42100001-2333321112233333201110122110000012233-2
Q gi|254780602|r 148 DNFQ-VSPEKLEQAITP---KTKWLFLNSP--SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-N 219 (400)
Q Consensus 148 ~~~~-~d~~~l~~~i~~---~~k~i~l~nP--~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s 219 (400)
..|. -..+.++..+.+ ++-++++ -| ++-.|.+. +++-++++-++| +++|+++|.||+...|.=.|.-+. .
T Consensus 216 ~~~~~~~~~~le~~~~~~~~~iAA~Ii-EPviqg~GG~~~p~~~yl~~lr~lc-~~~giLLI~DEV~tGfGRtG~~fa~e 293 (472)
T PRK08742 216 EDYALQAADALQALFEQSPGEICALIL-EPRVQCAGGMRMHHPAYLRRARELC-DAHGAFLIADEIATGFGRTGTLFACE 293 (472)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCEECCCHHHHHHHHHHH-HHHCCEEEECCCCCCCCCCCCCEEEC
T ss_conf 899999899999999857886479997-1576653870568999999999998-87296688403301687134452312
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHH-------CCCCCCCCCCCCCCCCCCCCCCC--CC
Q ss_conf 22111233322574146544322344-5444221101226875310-------01222332222222222223467--64
Q gi|254780602|r 220 IVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVL-------QGQQTSGACSIAQWAAVEALNGP--QD 289 (400)
Q Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~-------~~~~~~~~~~~~q~a~~~~l~~~--~~ 289 (400)
-..+.|+ |+ +++|..+ .| +-+|.+++.+++.+.+..- +.+ +.+.+.+...++++.|+-- ++
T Consensus 294 ~~gv~PD-----iv--~~aKglt-gGy~Plsav~~~~eI~~~~~~~~~~~~~~hg~-Ty~GnPlacAaala~L~i~~~e~ 364 (472)
T PRK08742 294 QAGVMPD-----LL--CLSKGLT-GGFLPLSAVLATQQLYDAFLDDSRERAFLHSH-SYTGNPLACAAALATLDIFADDD 364 (472)
T ss_pred CCCCCCC-----EE--EECHHHC-CCCCCEEEEEECHHHHHHHCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 4677997-----20--1212103-88777078987699997651477666513578-99999899999999999998655
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 32222221100000002455304776033027408998626410233211332248989999999987397998350228
Q gi|254780602|r 290 FVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG 369 (400)
Q Consensus 290 ~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg 369 (400)
.+++ .+....+...+.+.+.+.|.+.=++..| +++=+++..-.....+.........++++. ..+.|+++.|.
T Consensus 365 l~~~-~~~~g~~l~~~~~~l~~~p~V~dVRg~G-L~~gvElv~d~~~~~~~~~~~~~~~~~~~~-~~~~Gll~r~~---- 437 (472)
T PRK08742 365 VIAR-NQPIAARMTQLAAQIGEHPAVADVRQAG-MIVAFELTRGGNKRTPFPPAARVGLHAYRA-ALARGVVLRPL---- 437 (472)
T ss_pred HHHH-HHHHHHHHHHHHHHCCCCCCEEEECCCC-EEEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHHCCCEEEEC----
T ss_conf 9999-9999999999999615899789842686-499999715876578787778999999999-99789489854----
Q ss_pred CCCEEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 99728999--629999999999999999986
Q gi|254780602|r 370 HGPSIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 370 ~~~~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
.+.||++ +..+++++++++++|++.++.
T Consensus 438 -G~~i~~~PPL~it~~eid~~~~~l~~al~e 467 (472)
T PRK08742 438 -GDVLYWMPPYCVDEAQLALLADTTRHAIDE 467 (472)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf -999999799406899999999999999999
No 269
>PRK12403 putative aminotransferase; Provisional
Probab=99.38 E-value=1.4e-11 Score=90.61 Aligned_cols=348 Identities=12% Similarity=0.068 Sum_probs=170.3
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778-98999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAG-ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G-~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
.|+..+|+..|- ..+. -+|.|.+|+++.+++-.+ ++...+ ..+.+.++|+.+..... -.-+.+++++++++|.
T Consensus 52 dG~~ylD~~sg~~~~~lGh~~p~I~~Ai~~q~~~l~~-~~~~~~~~~~~~~elAe~L~~~~P--~~~~~v~f~~sGSEA~ 128 (460)
T PRK12403 52 DGKRYLDGMSGLWCTNLGYGRKDLAAAAARQMEQLPY-YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTNSGSEAN 128 (460)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHCC--CCCCEEEECCCHHHHH
T ss_conf 9899999563688643557959999999999975587-156545678899999999997578--7658698448718999
Q ss_pred CCCCCCCC-------CCCCCCCC-CCCCCCCCCCCC-CCCCC-----------CCC--CCCCC--CCCCCCC------HH
Q ss_conf 22222223-------32232222-333323222222-22222-----------222--22222--2232221------03
Q gi|254780602|r 105 FNALMATV-------NMGDEVLI-PRPYWVSYPDMV-ALCGG-----------IPV--FVDTQ--QDDNFQV------SP 154 (400)
Q Consensus 105 ~~~~~~~~-------~~Gd~Vlv-~~P~y~~y~~~~-~~~g~-----------~~~--~v~~~--~~~~~~~------d~ 154 (400)
..+++..- +++..+++ ..-+|-.....+ ...|. ... +.|.. ..++..+ ..
T Consensus 129 E~AiklAr~y~~~~g~~~~~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~~p~~~~~~~P~~~~~~~~~~~~~~~~~~~ 208 (460)
T PRK12403 129 EVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAA 208 (460)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99999999999860899746999966887740798872467412445678899841147754455667788778889999
Q ss_pred HHHHCCCC----CCCCCEEECCCC-CCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 33100012----212201211354-210000-123333211122333332011101221100000122332-22111233
Q gi|254780602|r 155 EKLEQAIT----PKTKWLFLNSPS-NPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSL 227 (400)
Q Consensus 155 ~~l~~~i~----~~~k~i~l~nP~-NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~ 227 (400)
.++++.+. +++-+|+ .-|= .-.|.+ .++..+++|-++| +++|+++|.||++..|.=.|.-+.. -..+.|+
T Consensus 209 ~~le~~i~~~~~~~iAavi-~EPi~g~gG~i~pp~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gV~PD- 285 (460)
T PRK12403 209 LQLEEKILELGAENVAGFV-AEPFQGAGGMIFPPESYWPEIQRIC-RQYDVLLCADEVIGGFGRTGEWFAHEHFGFEPD- 285 (460)
T ss_pred HHHHHHHHHHCCCCEEEEE-ECCCCCCCCEECCCHHHHHHHHHHH-HCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC-
T ss_conf 9999999962898669999-5452255865727567769999997-325966998625127763437730021795877-
Q ss_pred CCEEEEECCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCC
Q ss_conf 322574146544322344-54442211012268753100----1222332222222222223467--6432222221100
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTG-LRIGYAAGALSLIKSMIVLQ----GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEY 300 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G-~RiG~~v~~~~li~~l~~~~----~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~ 300 (400)
|+ +++|..+ .| +-+|.+++.+++.+.+..-. ...+.+.+.+...++.+.|+.- +..+++.+....+
T Consensus 286 ----iv--t~gK~l~-gG~~Plsav~~~~~i~~~~~~~~~~~~hg~T~~Gnpla~Aaala~l~~i~~e~l~~~~~~~~g~ 358 (460)
T PRK12403 286 ----TL--SIAKGLT-SGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGP 358 (460)
T ss_pred ----EE--EECCCCC-CCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf ----12--2212445-7877617997358999875037865014778899989999999999999866699999999999
Q ss_pred C-CCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHH---HHHHHHCCEEEECCCCCCCCCEEEE
Q ss_conf 0-00002455304776033027408998626410233211332248989999---9999873979983502289972899
Q gi|254780602|r 301 R-RDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFV---NGLLEIEKVAVVQGSSFGHGPSIRI 376 (400)
Q Consensus 301 ~-r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Ll~~~gV~v~pG~~Fg~~~~iRi 376 (400)
. ++.+.+.+++.+.+.=++..| +++=+++.+......+ .....+++ ..+..+.|+++.+. .+.+++
T Consensus 359 ~l~~~L~~l~~~~p~vgdVRG~G-Lm~gielv~~~~~~~~----~~~~~~~~~~~~~~~~~~Glli~~~-----~~~~~l 428 (460)
T PRK12403 359 YLQRCLREVFGDHPLVGEVQGAG-LVAALQFAEDKATRKR----FANENDLAWRCRTIGFEEGVIIRST-----LGRMIM 428 (460)
T ss_pred HHHHHHHHHHHCCCCEEEEECCC-EEEEEEECCCCCCCCC----CCCHHHHHHHHHHHHHHCCEEEEEC-----CCEEEE
T ss_conf 99999999872599588630145-4999994257642113----6525789999999999799899736-----980999
Q ss_pred E--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 9--6299999999999999999860
Q gi|254780602|r 377 S--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 377 s--~~~~~e~l~~al~rl~~~l~~l 399 (400)
+ +..+++++++++++|.+.++..
T Consensus 429 ~PPLiit~~eid~~~~~l~~al~~~ 453 (460)
T PRK12403 429 APALVAGRAEIDELVDKTRIAVDRT 453 (460)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8994388999999999999999999
No 270
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase; InterPro: IPR012749 This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family..
Probab=99.35 E-value=7.4e-13 Score=98.36 Aligned_cols=190 Identities=20% Similarity=0.292 Sum_probs=132.9
Q ss_pred HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 99999998388756998778989999999986421013333223323345433332222222-33223222233332322
Q gi|254780602|r 50 KYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-VNMGDEVLIPRPYWVSY 128 (400)
Q Consensus 50 ~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-~~~Gd~Vlv~~P~y~~y 128 (400)
.+.+.+|+..+.+ ...|. .-+....|+.++. +....++|+.++.+|.++...+ +++||+||+|+-+|..-
T Consensus 14 l~~i~~A~~~~kL---~GdG~--F~~~C~~Wl~~~~----~~~K~lLTpSCT~aLEmaAlL~Di~~GDEVIMPSyTFVST 84 (376)
T TIGR02379 14 LEYIAEAISEGKL---SGDGP--FSRRCEAWLEERT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVST 84 (376)
T ss_pred HHHHHHHHHCCCC---CCCCH--HHHHHHHHHHHHH----CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHH
T ss_conf 9999998616851---36851--1367789998851----5664211602567999999983046888367575145776
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 22222222222222222223222103331000122122012113542100001233332111223333320111012211
Q gi|254780602|r 129 PDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 129 ~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~ 208 (400)
..++.+.|+++++|+..++. ..+|...+|.+|++|||+|+.++- .|.. -++..|..+ +++|+++||+|.+-+
T Consensus 85 ANAFvLRGa~~vFVDir~dT-mNiDe~~IE~AIt~rT~aIvpVHY---aGVa---C~M~tIM~l-a~k~~L~ViEDAAQG 156 (376)
T TIGR02379 85 ANAFVLRGAKIVFVDIRPDT-MNIDETKIEAAITERTKAIVPVHY---AGVA---CDMDTIMAL-ANKHELFVIEDAAQG 156 (376)
T ss_pred HHHHHHCCCEEEEEEECCCC-CCCCHHHHHHHHCCCCEEEEEEEC---CCEE---CCHHHHHHH-HHHCCEEEEEECCCC
T ss_conf 67786728827999604200-046767898863258718998733---6421---054789877-643461699620047
Q ss_pred CC-CCCCCCCCCCCCCCCCCCCEEEEECCC--CCCCCCCCCCCCCC-CCHHHHHHHHHHHCC
Q ss_conf 00-000122332221112333225741465--44322344544422-110122687531001
Q gi|254780602|r 209 HI-VYRNCQFSNIVNVEPSLYERTLVVNGV--SKAYAMTGLRIGYA-AGALSLIKSMIVLQG 266 (400)
Q Consensus 209 ~l-~~~~~~~~s~~~~~~~~~~~~i~~~S~--SK~~~~~G~RiG~~-v~~~~li~~l~~~~~ 266 (400)
-. .|.|.+.-++.. +-.+|| +|++...| --|.+ +-++.++++..-++.
T Consensus 157 ~~S~YkgraLG~IGh---------~g~fSFHETKNy~~GG-EGGalliNd~~~~~RAEIirE 208 (376)
T TIGR02379 157 VMSTYKGRALGSIGH---------LGAFSFHETKNYTSGG-EGGALLINDQALIERAEIIRE 208 (376)
T ss_pred CCCCCCCCCCCCHHC---------HHCCCCCCCCCCCCCC-CCCEEEEECHHHHHHHHHHHC
T ss_conf 410127876644000---------0021100013421257-755056607788766777630
No 271
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=99.35 E-value=6.2e-12 Score=92.76 Aligned_cols=338 Identities=17% Similarity=0.171 Sum_probs=193.6
Q ss_pred CCCCEEEC--CCCCCCCC-CCHHHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665--65897498-899999999999838---8756998778989999999986421013333223323345433
Q gi|254780602|r 29 KGIDVLCL--TAGEPDFD-MPENVKYAVVRAMER---GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 29 ~g~~ii~l--~~G~p~~~-~p~~i~~a~~~al~~---~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
+|+.=||| +||-..+. ..|.+.||+++-++. ..+-|..... .+|=+.|++......| .-|..+|++.|.+++
T Consensus 27 ~GK~YlDf~aGIAV~~LGH~hP~l~Ea~~~Q~~kL~H~SNlY~~~~~-~~LA~kLv~~~~~dgG-qhd~~rvFFCNSGaE 104 (402)
T TIGR00707 27 NGKEYLDFVAGIAVNALGHAHPKLVEALKEQLEKLVHVSNLYYTEPQ-EELAEKLVEHSGADGG-QHDASRVFFCNSGAE 104 (402)
T ss_pred CCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHHHHEEECCCCCCCHH-HHHHHHHHHHHHCCCC-CCCCCEEEEECCHHH
T ss_conf 89465201002244011357889999999866240660776558089-9999999999704688-302326675147478
Q ss_pred CCCCCCCCC---CC----CCCCCCCCCCCCCCCCCCCCC-CCCCCC----CCCCCCCCCCCC--H-HHHHHCCCCCC---
Q ss_conf 332222222---33----223222233332322222222-222222----222222232221--0-33310001221---
Q gi|254780602|r 103 VIFNALMAT---VN----MGDEVLIPRPYWVSYPDMVAL-CGGIPV----FVDTQQDDNFQV--S-PEKLEQAITPK--- 164 (400)
Q Consensus 103 ~l~~~~~~~---~~----~Gd~Vlv~~P~y~~y~~~~~~-~g~~~~----~v~~~~~~~~~~--d-~~~l~~~i~~~--- 164 (400)
|...++..- .. ...++|-..=+|-. +.+..+ +..++. +-||.++-.|.+ | +++++++|++.
T Consensus 105 AnEAAlKlARk~~~~~g~~k~~ivaf~naFHG-RT~g~LsaTgqpKy~~~F~PLvpgf~y~~yNDe~~~l~~~i~~~~eg 183 (402)
T TIGR00707 105 ANEAALKLARKYTGDKGKEKKKIVAFENAFHG-RTMGALSATGQPKYQKPFEPLVPGFKYVPYNDEIEALKEAIDDEKEG 183 (402)
T ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEEECCCC-CHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCC
T ss_conf 99999999898640227886538888707763-00454300477645685788423812444889789999985025778
Q ss_pred --CCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC-CCCCC--CCCCCCCEEEEECCC
Q ss_conf --220121135-421000-01233332111223333320111012211000001223-32221--112333225741465
Q gi|254780602|r 165 --TKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF-SNIVN--VEPSLYERTLVVNGV 237 (400)
Q Consensus 165 --~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~-~s~~~--~~~~~~~~~i~~~S~ 237 (400)
|-+|+|= | +==.|. .-+.+.|+++-++|.+ +|++||.||+=-.+-=.|+-+ .--.. +.|| +| ++
T Consensus 184 ~rtAAvivE-piQGEgGV~pa~~~fL~a~r~lc~~-~~~LLI~DEVQtG~GRTG~~fA~~Hygse~~PD----i~---T~ 254 (402)
T TIGR00707 184 DRTAAVIVE-PIQGEGGVVPADKEFLKALRELCED-KDALLIFDEVQTGLGRTGKLFAYEHYGSEVEPD----II---TL 254 (402)
T ss_pred CCEEEEEEE-EECCCCCCCCCCHHHHHHHHHHHHH-CCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCH----HH---HH
T ss_conf 718899985-3217865334877899999999864-891899944752877433223312068845523----87---54
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC----
Q ss_conf 4432234454442211012268753100122233222222222222346764322222211000000024553047----
Q gi|254780602|r 238 SKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVP---- 313 (400)
Q Consensus 238 SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~---- 313 (400)
-|.+| .|+-||.+++.+++.+.+.-=..-+++|-|++...|+...|+--++ +.+.+.-+++-+++.+.|+++.
T Consensus 255 AKgLG-gG~PiGA~~~~e~~a~~~~~G~HGsTFGGNPLAc~Aa~~vl~~i~~--~~~l~~v~~~G~~f~~~L~~~~~~~~ 331 (402)
T TIGR00707 255 AKGLG-GGVPIGAVLAKEEVAEALTPGDHGSTFGGNPLACAAALAVLEVIEK--ERLLEKVKEKGDYFKERLEELIKKYI 331 (402)
T ss_pred HHHHH-CCCHHHHHEEHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 05552-7820223202367873158989866678738999998776665505--10478999988999999998617766
Q ss_pred -CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHH
Q ss_conf -7603302740899862641023321133224898999999998739799835022899728999--6299999999999
Q gi|254780602|r 314 -GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACV 390 (400)
Q Consensus 314 -g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~ 390 (400)
-++-++..| ..+=+++.. .. ..+.+.... +++.|++|.+-. +.=+|+. +..++|.|+++++
T Consensus 332 ~l~k~VRG~G-LmlG~e~~~---------~~-~~a~~~~~~-a~~~GlLv~~Ag----~~v~Rf~PPL~i~~e~i~~~~~ 395 (402)
T TIGR00707 332 DLIKEVRGKG-LMLGIELEA---------PS-VAAKDIVKE-AREKGLLVNTAG----PKVLRFVPPLIITEEEIDEAVD 395 (402)
T ss_pred CCEEEEECCE-EEEEEEECC---------CC-CCHHHHHHH-HHHCCCEEECCC----CCEEEECCCCCCCHHHHHHHHH
T ss_conf 7401532312-346556427---------86-558999999-984892688178----8706615786445889999999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780602|r 391 RIKRFCH 397 (400)
Q Consensus 391 rl~~~l~ 397 (400)
+|++.|+
T Consensus 396 ~l~~~~~ 402 (402)
T TIGR00707 396 ALEEAIE 402 (402)
T ss_pred HHHHHHC
T ss_conf 9999829
No 272
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.34 E-value=3.8e-11 Score=87.92 Aligned_cols=348 Identities=17% Similarity=0.162 Sum_probs=167.0
Q ss_pred CCCCEEECCCCCC--CCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCCCC
Q ss_conf 6997266565897--498-89999999999983887569987789899999999864210133332233---23345433
Q gi|254780602|r 29 KGIDVLCLTAGEP--DFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQI---IVGTGAKH 102 (400)
Q Consensus 29 ~g~~ii~l~~G~p--~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I---~it~G~~~ 102 (400)
.|+..+|+..|.- .+. -.|.|.+|+++.++.+.+-++. .-..+.+.++|+.+.+.... ..+.+ +.++++++
T Consensus 51 dG~~yLD~~sg~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~--~~~~~~~~F~~~SGSE 127 (454)
T PRK06931 51 EGNEYLDCLAGAGTLALGHNHPAVMQSIQDVLDSGLPLHTL-DLTTPLKDAFSEELLSFLPG--EKDEYCLQFTGPSGAD 127 (454)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCCCCEEC-CCCCHHHHHHHHHHHHHCCC--CCCCEEEEECCCCHHH
T ss_conf 88999891631775546179599999999998628871127-76867999999999984776--5672489973897489
Q ss_pred CCCCCCCCCC-CCC-CCCCCCCCCCCCCCCCC-CCCC--------------CCCCCCCCCCCCCCCC----HHHHH----
Q ss_conf 3322222223-322-32222333323222222-2222--------------2222222222232221----03331----
Q gi|254780602|r 103 VIFNALMATV-NMG-DEVLIPRPYWVSYPDMV-ALCG--------------GIPVFVDTQQDDNFQV----SPEKL---- 157 (400)
Q Consensus 103 ~l~~~~~~~~-~~G-d~Vlv~~P~y~~y~~~~-~~~g--------------~~~~~v~~~~~~~~~~----d~~~l---- 157 (400)
|+..++...- ..| ..|+...-+|-.-...+ ...| ...+++|-.....|.. +.+.+
T Consensus 128 AvE~AlKlAr~~tgR~~iis~~~sYHG~T~gals~tg~~~~~~~~~~l~p~~~~~p~p~~~r~p~~~~~~~~~~~~~~~~ 207 (454)
T PRK06931 128 AVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALSLTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYF 207 (454)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 99999999876069981999806889974335311079652225688899966807975235766776233699999999
Q ss_pred HCC---CC---CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 000---12---21220121135-4210000-123333211122333332011101221100000122332-221112333
Q gi|254780602|r 158 EQA---IT---PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLY 228 (400)
Q Consensus 158 ~~~---i~---~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~ 228 (400)
++. +. .++-++++ -| +.=.|.+ .+++-+++|-++| ++||+++|.||+...+.=.|.-+.. -..+.|+
T Consensus 208 ~~~i~~~~~~~~~~AAvii-EPiqg~gG~~~~p~~yl~~lr~lc-~~~gillI~DEV~tGfGRTG~~fa~e~~gv~PD-- 283 (454)
T PRK06931 208 ENFIEDVESGVVKPAAVIL-EAIQGEGGVVPAPVSWLQKIREVT-QKHGILLIVDEVQAGFARSGKMFAFEHAGIEPD-- 283 (454)
T ss_pred HHHHHHHHHCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCEEEEECCCCCCCCCCCCCCHHCCCCCCCC--
T ss_conf 9999999706887259999-476688897618889988999875-116818995034437786778412102588989--
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHH
Q ss_conf 22574146544322344544422110122687531001222332222222222223467--6432222221100000002
Q gi|254780602|r 229 ERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCV 306 (400)
Q Consensus 229 ~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~ 306 (400)
|+ +++|.++ .|+-+|.++..+. ++.+.......+.+.+.+...++.+.|+.- ++.++ ..+++-+++.
T Consensus 284 ---Ii--~~gKglg-gG~P~a~~~~~~~-~~~~~~~~h~~T~~Gnpla~Aaala~L~~i~~e~l~~----~~~~~G~~l~ 352 (454)
T PRK06931 284 ---IV--VMSKAVG-GGLPLAVLGIKKE-FDAWQPAGHTGTFRGNQLAMATGLATLKILRDENLAQ----NAQERGEWLT 352 (454)
T ss_pred ---EE--EEHHHHC-CCCCEEEEEEHHH-HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHH
T ss_conf ---60--0215324-8885489987555-5246788866456898478899999999998624999----9999999999
Q ss_pred HHHHC----CCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHH---HHHHCCEEEECCCCCCCCCEEEEE--
Q ss_conf 45530----477603302740899862641023321133224898999999---998739799835022899728999--
Q gi|254780602|r 307 AQLQG----VPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNG---LLEIEKVAVVQGSSFGHGPSIRIS-- 377 (400)
Q Consensus 307 ~~L~~----~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~---Ll~~~gV~v~pG~~Fg~~~~iRis-- 377 (400)
+.|++ .|.+.=++..| +++=+++-+........+. ...+.+++.. .+.+.|+++.|+.. ..+.+|++
T Consensus 353 ~~L~~l~~~~p~V~dVRG~G-L~~giElv~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~Gll~~~~g~--~~nvlr~~PP 428 (454)
T PRK06931 353 AALRELSKEYPCIGNVRGRG-LMIGIEIVDERKPADATGS-YPADGELAAAIQKACFNNKLLLERGGR--NGNVVRLLCP 428 (454)
T ss_pred HHHHHHHHCCCCEEEECCCC-EEEEEEEEECCCCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEECCC--CCCEEEEECC
T ss_conf 99999987099888631374-4899998006764322355-666689999999999978968954689--9998999799
Q ss_pred EECCHHHHHHHHHHHHHHHHH
Q ss_conf 629999999999999999986
Q gi|254780602|r 378 YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 378 ~~~~~e~l~~al~rl~~~l~~ 398 (400)
+..+++++++++++|++.++.
T Consensus 429 L~it~~eid~~l~~l~~al~e 449 (454)
T PRK06931 429 LNITQAECEEFIKRFKQAVAE 449 (454)
T ss_pred CCCCHHHHHHHHHHHHHHHHH
T ss_conf 016899999999999999999
No 273
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.34 E-value=5.3e-12 Score=93.15 Aligned_cols=341 Identities=17% Similarity=0.183 Sum_probs=184.9
Q ss_pred CCCEEECCCCCCC--C-CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9972665658974--9-889999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r 30 GIDVLCLTAGEPD--F-DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 30 g~~ii~l~~G~p~--~-~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
|+.-|++..|.-. + -.+|.|++|+++.+++|. .|+.+. ..| -.+|+.+.++.+ +.|.|-++|.+++|-..
T Consensus 52 Gn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~-~fg~Pt-e~E--i~~Aell~~~~p---~~e~vrfvnSGTEAtms 124 (432)
T COG0001 52 GNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL-SFGAPT-ELE--VELAELLIERVP---SIEKVRFVNSGTEATMS 124 (432)
T ss_pred CCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHCC-CCCCCC-HHH--HHHHHHHHHHCC---CCCEEEEECCHHHHHHH
T ss_conf 98754013057650008898799999999997267-778997-789--999999998658---65089986064089999
Q ss_pred CC---CCCCCCCCCCCCCCCCCCCCCCCCCC-C--CCCCCC------CCCCCC-C----CCCCHHHHHHCCCCCC---CC
Q ss_conf 22---22233223222233332322222222-2--222222------222222-3----2221033310001221---22
Q gi|254780602|r 107 AL---MATVNMGDEVLIPRPYWVSYPDMVAL-C--GGIPVF------VDTQQD-D----NFQVSPEKLEQAITPK---TK 166 (400)
Q Consensus 107 ~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~-~--g~~~~~------v~~~~~-~----~~~~d~~~l~~~i~~~---~k 166 (400)
++ ++++.. |.|+..+=+|-.+...... + |..-.. +|-... + .| =|++.+++++... .-
T Consensus 125 AiRlARa~TgR-~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y-ND~~al~~~~~~~g~~IA 202 (432)
T COG0001 125 AIRLARAYTGR-DKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY-NDLEALEEAFEEYGDDIA 202 (432)
T ss_pred HHHHHHHHHCC-CEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECC-CCHHHHHHHHHHCCCCEE
T ss_conf 99999876479-7599972888887118784267675557899999997345344788457-999999999987689679
Q ss_pred CEEECCC--CCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 0121135--4210000123-333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 167 WLFLNSP--SNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 167 ~i~l~nP--~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+|+ +-| .| -|.+.+. +.+++|-++| +++++++|.||+...|...-.-......+.|+ +.++.|..+
T Consensus 203 aVI-vEPv~gn-~g~i~p~~~Fl~~Lr~lt-~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-------lttlGKiIG- 271 (432)
T COG0001 203 AVI-VEPVAGN-MGVVPPEPGFLEGLRELT-EEHGALLIFDEVITGFRVALGGAQGYYGVEPD-------LTTLGKIIG- 271 (432)
T ss_pred EEE-ECCCCCC-CCCCCCCHHHHHHHHHHH-HHCCCEEEEECCHHHCCCCCCCCCCCCCCCCC-------HHHHHHHHC-
T ss_conf 999-5424678-898989878999999999-97194899862212045477642010086963-------332224404-
Q ss_pred CCCCCCCCCCHHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC---CCCEE
Q ss_conf 4454442211012268753100---12223322222222222234676432222221100000002455304---77603
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQ---GQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV---PGIRY 317 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~~ 317 (400)
.|+-+|...+.+++++.+.... +..+.+-+.+...|..+.|+..++ .+...+.+.+.-+.+.+.|+++ .|+.+
T Consensus 272 GGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~-~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~ 350 (432)
T COG0001 272 GGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMT-EEGVYERLDALGERLAEGLRAAAERHGIPL 350 (432)
T ss_pred CCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 7752011256999996327788764567778868999999999999873-651899999999999999999999839985
Q ss_pred EE-CCCCEEE-EEECCCCCCCCCCCCCCCCCH----HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHH
Q ss_conf 30-2740899-862641023321133224898----99999999873979983502289972899962999999999999
Q gi|254780602|r 318 MI-PDGAFYL-YPSCQDLIGKKSPSGDVIRTD----LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVR 391 (400)
Q Consensus 318 ~~-p~g~~y~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~r 391 (400)
.. -.|++|- +..-.+..+.. +...++ ..|...|| +.||.+.|.. | +. .=+|.+.++++++..++.
T Consensus 351 ~v~~~gsm~~i~F~~~~~~n~~----da~~sd~~~~~~~~~~~l-~~GV~l~ps~-~--ea-~flS~ahte~di~~~~~a 421 (432)
T COG0001 351 TVNRVGSMFGIFFTEEGVRNYA----DAKRSDVERFAKFFHHLL-NRGVYLAPSQ-F--EA-GFLSTAHTEEDIDRTLEA 421 (432)
T ss_pred EEEEECCEEEEEECCCCCCCHH----HHHHHCHHHHHHHHHHHH-HCCCCCCCCC-C--CC-EEEECCCCHHHHHHHHHH
T ss_conf 8862042589995589988899----998635699999999999-6882347755-5--54-552004689999999999
Q ss_pred HHHHHHHCC
Q ss_conf 999998609
Q gi|254780602|r 392 IKRFCHSLQ 400 (400)
Q Consensus 392 l~~~l~~l~ 400 (400)
+.+.++.+.
T Consensus 422 ~~~~~~~~~ 430 (432)
T COG0001 422 ADEAFKELA 430 (432)
T ss_pred HHHHHHHHH
T ss_conf 999999863
No 274
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=99.34 E-value=9e-13 Score=97.86 Aligned_cols=267 Identities=19% Similarity=0.205 Sum_probs=161.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHCCCCCCCCCEE
Q ss_conf 23345433332222222332232222333323----222222222222222222222322210-3331000122122012
Q gi|254780602|r 95 IVGTGAKHVIFNALMATVNMGDEVLIPRPYWV----SYPDMVALCGGIPVFVDTQQDDNFQVS-PEKLEQAITPKTKWLF 169 (400)
Q Consensus 95 ~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~~~d-~~~l~~~i~~~~k~i~ 169 (400)
+.++.++.|+..+++.++..||.|+-..--|. .+...++.+|.++.+++-+ | +|+++++|++|||+||
T Consensus 76 l~~ASG~AA~~~Ailnla~AGDnIVsS~~LYGGTynLF~~TlkrlGIevrFvd~d-------d~pe~~~k~id~nTKAvf 148 (434)
T TIGR01326 76 LAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDGD-------DDPEELEKAIDENTKAVF 148 (434)
T ss_pred HHHCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHCCEEEEEECCC-------CCHHHHHHHCCCCCEEEE
T ss_conf 2101157999999999972698269806444225789999555448148872788-------887899976066751898
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCC--CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 1135421000012333321112233333--20111012211000001223322211123332257414654432234454
Q gi|254780602|r 170 LNSPSNPSGVVYSQNRLRALADVLVRNP--HVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 170 l~nP~NPTG~v~s~~~l~~i~~~~a~~~--~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
+=+=.||-..|.+ +++|+++ |+++ +|.+|+|..-..= |.=..|+- -++ -|+++|+||..+-=|.=
T Consensus 149 ~EtIgNP~~~v~D---ie~~a~~-Ah~~PhgvPliVDNT~atp---GYL~rPi~---hGA---DIVvhSaTK~iGGHG~a 215 (434)
T TIGR01326 149 AETIGNPALNVPD---IEAVAEV-AHAHPHGVPLIVDNTFATP---GYLCRPID---HGA---DIVVHSATKYIGGHGTA 215 (434)
T ss_pred EECCCCCCCCCCC---HHHHHHH-HHHCCCCCEEEEECCCCCC---CCCCCHHH---CCC---CEEEEEECCCCCCCEEE
T ss_conf 4012387767678---5899999-9867898348874786876---41006456---498---67996100101263146
Q ss_pred CCCCCCHHHHH-HHHH---HHCC------------C-CCCC--------CCCCCCCCCCCCCCCC-------CCCC----
Q ss_conf 44221101226-8753---1001------------2-2233--------2222222222223467-------6432----
Q gi|254780602|r 248 IGYAAGALSLI-KSMI---VLQG------------Q-QTSG--------ACSIAQWAAVEALNGP-------QDFV---- 291 (400)
Q Consensus 248 iG~~v~~~~li-~~l~---~~~~------------~-~~~~--------~~~~~q~a~~~~l~~~-------~~~~---- 291 (400)
+|=++.+..-. +... |... + ...+ ...+.-++=+++|++. ..|+
T Consensus 216 iGG~ivD~G~FndW~~~~gkFP~f~~PdpsYHGl~f~E~~g~~~~~G~~~~Afi~~~Rv~~LRD~Gaa~sPFnAFLllQG 295 (434)
T TIGR01326 216 IGGVIVDGGKFNDWANNPGKFPLFTTPDPSYHGLVFTETFGEFEGLGLGNIAFIVKARVQLLRDLGAALSPFNAFLLLQG 295 (434)
T ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHEEEEEEEEECHHCCCCCCHHHHHHHHHH
T ss_conf 50478826755630147874777888888658712653155757778500000344467422100334017899999986
Q ss_pred -CC---CCCCCCCCCCCHHHHHHCCCCCEEEE-C----------------CCCEEEEE--ECCCCCCCCCCCCCCCCCHH
Q ss_conf -22---22211000000024553047760330-2----------------74089986--26410233211332248989
Q gi|254780602|r 292 -VN---NRKIFEYRRDLCVAQLQGVPGIRYMI-P----------------DGAFYLYP--SCQDLIGKKSPSGDVIRTDL 348 (400)
Q Consensus 292 -~~---~~~~~~~~r~~~~~~L~~~~g~~~~~-p----------------~g~~y~~~--~~~~~~~~~~~~~~~~~~~~ 348 (400)
|- ..++=.+|...+.+.|++.|.+.++. | .|-+=.-+ .+.+. ......+-|+.
T Consensus 296 LETLsLR~ERH~~NA~kVA~fL~~Hp~V~wV~YPGL~s~~~h~lAkkYl~~G~~G~vLsFe~kGG----~ea~~kfidal 371 (434)
T TIGR01326 296 LETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKGLFGAVLSFEIKGG----REAGKKFIDAL 371 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCC----HHHHHHHHHHH
T ss_conf 66787678888899999999972788445134888788753788998741794267874132182----88999998776
Q ss_pred HHHHHHH---HHCCEEEECCCC------------CC-CCCEEEEEEEC-CHHHH
Q ss_conf 9999999---873979983502------------28-99728999629-99999
Q gi|254780602|r 349 DFVNGLL---EIEKVAVVQGSS------------FG-HGPSIRISYAV-SDAIL 385 (400)
Q Consensus 349 ~~~~~Ll---~~~gV~v~pG~~------------Fg-~~~~iRis~~~-~~e~l 385 (400)
+++.+|+ +.+-+++-|-+. =| .++.||+|++. ..|+|
T Consensus 372 kL~s~lANvGDaksLvIHPAsTTH~QL~e~Eq~~AGVt~~~iRlSvGIE~iDDI 425 (434)
T TIGR01326 372 KLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLSVGIENIDDI 425 (434)
T ss_pred HHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEECCCHHHH
T ss_conf 778776554201110334775666657979998538975707898721876789
No 275
>PRK08555 consensus
Probab=99.33 E-value=2.6e-11 Score=88.97 Aligned_cols=346 Identities=13% Similarity=0.108 Sum_probs=172.8
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|. ..+. -.|.|.+|+++.++.-. .++...-..+.+..+|+.+.+...-+. .+.|.++++++++..
T Consensus 50 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~ql~~l~-~~~~~~~~~~~~~~lae~L~~~~p~~~-~~~v~f~~SGSEAvE 127 (443)
T PRK08555 50 DGNVYLDFSSGIGVNNLGHSHPRVIEAVEEQLHKLW-HAAGTDFYNEYQVELAKKLVEIAPGDF-EKKVFFSNSGTEANE 127 (443)
T ss_pred CCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHHHCC-CCCCCCCCCHHHHHHHHHHHHHCCCCC-CCEEEEECCHHHHHH
T ss_conf 889999905327642124897999999999986176-746564368899999999998577565-655998087788999
Q ss_pred CCCCCCC-CCC-CCCCCCCCCCCCCCC-CCCCCC---------------CCCCCCCCCCCCCCCC----H--------HH
Q ss_conf 2222223-322-322223333232222-222222---------------2222222222232221----0--------33
Q gi|254780602|r 106 NALMATV-NMG-DEVLIPRPYWVSYPD-MVALCG---------------GIPVFVDTQQDDNFQV----S--------PE 155 (400)
Q Consensus 106 ~~~~~~~-~~G-d~Vlv~~P~y~~y~~-~~~~~g---------------~~~~~v~~~~~~~~~~----d--------~~ 155 (400)
.+++..- ..| ..|+...-+|-.... .....| ...+++|-...+-|.. + .+
T Consensus 128 ~AiklAr~~tgr~~ii~~~~~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~~~~~~~~~~~~~~~ 207 (443)
T PRK08555 128 AALKIAKWYTGRKMFIAFIGAFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGIDGYENPDELVNRVID 207 (443)
T ss_pred HHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999887379988999958707897211687258501104778999993681688622464456665699999999999
Q ss_pred HHHCCC-----CC-CCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 310001-----22-1220121135-421000-012333321112233333201110122110000012233-22211123
Q gi|254780602|r 156 KLEQAI-----TP-KTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 156 ~l~~~i-----~~-~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
.+++.+ .+ +..++++ -| ..-.|. +.+++-+++|.++| +++|+++|.||++..|.=.|.-+. .-..+.|+
T Consensus 208 ~ie~~i~~~~~~~~~iAavi~-EPi~g~gG~~~pp~~yl~~l~~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 285 (443)
T PRK08555 208 YIEEYLFEHYVPPEEVAGIFF-EPIQGEGGYVVPPKNFFKELKKLA-DKYGILLIDDEVQMGLGRTGKMFAIEHFGVEPD 285 (443)
T ss_pred HHHHHHHHHCCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCCEECCCCCCCC
T ss_conf 999999862579898899999-587688898758878878999999-974946963544127870247412316888998
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 33225741465443223445444221101226875310012223322222222222234676432222221100000002
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCV 306 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~ 306 (400)
|+ +++|..+ .|+-+|.++..+++.......+. .+.+.+.+...++.+.|+--++ +..+..+++-+++.
T Consensus 286 -----iv--~~gKgl~-~G~Pl~av~~~~e~~~~~~~~h~-~T~~gnpla~aaa~a~L~~i~e---~l~~~~~~~g~~l~ 353 (443)
T PRK08555 286 -----II--TLAKALG-GGIPIGATIFRADLDFKKPGLHS-NTFGGNALASAAGLAVIEEIKE---GLLENVQKLGKYFR 353 (443)
T ss_pred -----EE--EECCCCC-CCCCEEEEEEHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHH
T ss_conf -----89--9774244-88750899982453557777737-6888548999999999999997---79999999999999
Q ss_pred HHHHCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EEC
Q ss_conf 455304----77603302740899862641023321133224898999999998739799835022899728999--629
Q gi|254780602|r 307 AQLQGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAV 380 (400)
Q Consensus 307 ~~L~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~ 380 (400)
+.|+++ +.+.-++.. |+++=+++-+......+.. .....++..++ +.|+++.++. .+.||+. +..
T Consensus 354 ~~L~~l~~~~~~v~dvRG~-Gl~~gielv~~~~~~~~~~---~~~~~i~~~~~-~~Gll~~~~g----~n~ir~~PPL~i 424 (443)
T PRK08555 354 ERLEELKEKYEIIGDVRGL-GLAWAIEFVKDRKTKEPNP---KLRDRVVVEAF-KRGLILLGCG----KSAIRLIPPLII 424 (443)
T ss_pred HHHHHHHHCCCCEEEECCC-CEEEEEEEECCCCCCCCCH---HHHHHHHHHHH-HCCEEEEECC----CCEEEEECCCCC
T ss_conf 9999988619977872326-6799999823776567798---99999999999-7890997379----998999779438
Q ss_pred CHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999860
Q gi|254780602|r 381 SDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 381 ~~e~l~~al~rl~~~l~~l 399 (400)
+++++++++++|.+.|+..
T Consensus 425 t~~eid~~~~~l~~al~~V 443 (443)
T PRK08555 425 SEEEAKIGLEILEEAIKVV 443 (443)
T ss_pred CHHHHHHHHHHHHHHHHHC
T ss_conf 8999999999999999639
No 276
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=7e-11 Score=86.32 Aligned_cols=343 Identities=15% Similarity=0.137 Sum_probs=169.4
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
+|+..||+..|- ..+. -.|.|.+|+++.++.-.+.+.. ....+....+|+.+.+... ..-+.+++++++++|..
T Consensus 51 dG~~ylD~~~g~~~~~lGH~~p~i~~Ai~~Q~~~l~~~~~~-~~~~~~~~~lae~L~~~~P--~~~~~v~f~~sGSEAvE 127 (457)
T PRK05639 51 DGNVFIDFLAGAAAASTGYSHPKLVKAVKEQVELIQHSMIG-YTHSERAIRVAEKLVKISP--IKNSKVIFGLSGSDAVD 127 (457)
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC-CCCCHHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHH
T ss_conf 96988880541886676179699999999998644476577-7488799999999997589--88775998186589999
Q ss_pred CCCCCC-CCCC-CCCCCCCCCCCCCCCC-CCCCC--------CC-----CCCCCCC--CCCCCCC----H--------HH
Q ss_conf 222222-3322-3222233332322222-22222--------22-----2222222--2232221----0--------33
Q gi|254780602|r 106 NALMAT-VNMG-DEVLIPRPYWVSYPDM-VALCG--------GI-----PVFVDTQ--QDDNFQV----S--------PE 155 (400)
Q Consensus 106 ~~~~~~-~~~G-d~Vlv~~P~y~~y~~~-~~~~g--------~~-----~~~v~~~--~~~~~~~----d--------~~ 155 (400)
.++..- ...| ..|+...-+|-..... ....+ .. +..+|.. ...-|.+ + .+
T Consensus 128 ~AiKlAr~~t~r~~Iis~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~~~~~~~~~~~~~~~ 207 (457)
T PRK05639 128 MAIKVSKFSTRRPWILAFIGAYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGINGYEEPNELINRVLD 207 (457)
T ss_pred HHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999864259886999935779865140001468754456888889984781798633453356763378999999999
Q ss_pred HHHCCCC------CCCCCEEECCC-CCCCCCCC-CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCC
Q ss_conf 3100012------21220121135-42100001-2333321112233333201110122110000012233-22211123
Q gi|254780602|r 156 KLEQAIT------PKTKWLFLNSP-SNPSGVVY-SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPS 226 (400)
Q Consensus 156 ~l~~~i~------~~~k~i~l~nP-~NPTG~v~-s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~ 226 (400)
.+++.+. +++-+++ .-| +.-.|.+. +++.+++|-++| +++|+++|.||+...|.=.|.-+. ....+.|+
T Consensus 208 ~le~~i~~~~~~~~~iAavi-~EPiqg~gG~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfGRtG~~fa~e~~gv~PD 285 (457)
T PRK05639 208 YLENYVFSHVVPPDEVAALF-AEPIQGDAGIVVPPENFFKELKKLL-NELGILLVMDEVQTGIGRTGKWFASEWFSVKPD 285 (457)
T ss_pred HHHHHHHHHCCCCCCEEEEE-EECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCHHHHHCCCCCCC
T ss_conf 99999986146889789999-8276688798628989988999999-763986873103227762565456643799999
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 3322574146544322344544422110122687531001222332222222222223467--64322222211000000
Q gi|254780602|r 227 LYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDL 304 (400)
Q Consensus 227 ~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~ 304 (400)
|++ ++|.++ .|+-++.+++.+++++....... .+.+.+.+...++.+.|+.- ++.++. -++.-++
T Consensus 286 -----ii~--~gKgl~-~G~plsav~~~~~i~~~~~g~~~-~T~~gnpla~Aaa~a~L~~i~~~~l~~~----a~~~g~~ 352 (457)
T PRK05639 286 -----MII--FGKGVA-SGMGLSGVIGRKEIMDITSGSAL-LTPAANPVISAAAEATLEIIEEENLLKN----ALEVGNF 352 (457)
T ss_pred -----EEE--ECCHHC-CCCCCEEEEECHHHHHHHCCCCC-CCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHH
T ss_conf -----999--772210-79870799984887754057655-5788652999999999999996559999----9999999
Q ss_pred HHHHHHCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 02455304----77603302740899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 305 CVAQLQGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 305 ~~~~L~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
+.+.|+++ +.+.-++.. |+++=+++.+......+ ....+++.++ .+.|+++.+...+ ++.||+. +
T Consensus 353 l~~~L~~L~~~~~~v~dVRG~-GL~~giel~~~~~~~~~-----~~~~~v~~~~-~~~Gll~~~~g~~--~nvirl~PPL 423 (457)
T PRK05639 353 IMKRLEEMKEVFEIIGDVRGK-GLMIGVEIVKENGRPDP-----EMTGKICWRA-FELGLILPSYGMF--GNVIRITPPL 423 (457)
T ss_pred HHHHHHHHHHHCCCEEEECCC-CCEEEEEEECCCCCCCH-----HHHHHHHHHH-HHCCCEEECCCCC--CCEEEEECCE
T ss_conf 999999988638975655037-80999999437899899-----9999999999-9679688158999--9989997893
Q ss_pred ECCHHHHHHHHHHHHHHHHH
Q ss_conf 29999999999999999986
Q gi|254780602|r 379 AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l~~ 398 (400)
..+++++++++++|.+.++.
T Consensus 424 ~it~~eid~~~~il~~al~e 443 (457)
T PRK05639 424 VLTKEVAEKGLEIIERAIKD 443 (457)
T ss_pred ECCHHHHHHHHHHHHHHHHH
T ss_conf 16899999999999999999
No 277
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.31 E-value=3.7e-12 Score=94.12 Aligned_cols=288 Identities=16% Similarity=0.177 Sum_probs=161.5
Q ss_pred HHHHHHHHHHCCC----CEEECCCCCCCCCCCHHHHHHHHHH-HHCCCCCCCC--CCCCHHHHHHHHHHHHHHCCCCCCC
Q ss_conf 9999999998699----7266565897498899999999999-8388756998--7789899999999864210133332
Q gi|254780602|r 19 AAQRVRDLRSKGI----DVLCLTAGEPDFDMPENVKYAVVRA-MERGETKYTA--VAGISPLREAIVEKFRRDNDLHYTS 91 (400)
Q Consensus 19 ~~~~~~~~~~~g~----~ii~l~~G~p~~~~p~~i~~a~~~a-l~~~~~~Y~~--~~G~~~lR~aia~~~~~~~g~~~~~ 91 (400)
+....+.+.+++. .++.++.|-.++-+|..+...+.+. .-+..+.|.+ +||..+.--.....+....|+++..
T Consensus 4 ~~rh~~~L~~kN~~~~~~~~flG~g~y~h~~p~~v~~~~~r~ef~t~ytpyq~E~sQG~Lq~~~e~Qs~i~eLtGmdv~n 83 (398)
T cd00613 4 VLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILENEFYTAYTPYQPEISQGRLQALFELQTMLCELTGMDVAN 83 (398)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 99999999966768686715674602562338898987386767146999896886999999999999999986888356
Q ss_pred CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 23323345433---332222222332232222333323222222222----22222222222232221033310001221
Q gi|254780602|r 92 DQIIVGTGAKH---VIFNALMATVNMGDEVLIPRPYWVSYPDMVALC----GGIPVFVDTQQDDNFQVSPEKLEQAITPK 164 (400)
Q Consensus 92 e~I~it~G~~~---~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~----g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 164 (400)
- -+-.|++. +..+++..--.+.++|++++-..|.+...++.+ |.+++.++.++++ .+|+++|+++++++
T Consensus 84 a--Sl~d~a~A~aEa~~ma~~~~~~~r~~vlv~~~~hp~~~~v~~t~~~~~g~~i~~v~~~~~G--~~d~~~l~~~~~~~ 159 (398)
T cd00613 84 A--SLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEGG--TVDLEALKEEVSEE 159 (398)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCC--CCCHHHHHHHCCCC
T ss_conf 3--2687677999999999998626899899778778036999999861258658994266677--74658888750788
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC---
Q ss_conf 22012113542100001233332111223333320111012211000001223322211123332257414654432---
Q gi|254780602|r 165 TKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAY--- 241 (400)
Q Consensus 165 ~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~--- 241 (400)
+-++++.||| -.|.+- +.+++|++++ ++.+.+++.|-. .+....-+ .|+...--|+++..-|.+
T Consensus 160 ~a~v~v~~Pn-~~G~~e--~~~~~i~~~~-h~~gal~~~~~~--~~~l~~l~-------~Pg~~GaDI~~g~~q~~g~P~ 226 (398)
T cd00613 160 VAALMVQYPN-TLGVFE--DLIKEIADIA-HSAGALVYVDGD--NLNLTGLK-------PPGEYGADIVVGNLQKTGVPH 226 (398)
T ss_pred EEEEEECCCC-CCEEEE--CCHHHHHHHH-HHCCCEEEEEEC--CHHHHCCC-------CCCCCCCCEEEECCCCCCCCC
T ss_conf 5999952799-962785--1999999999-875986999744--03531555-------710047877985251146656
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHC-C---------------------------CCCCCCCC-CCCCCCCCCC-CCCCCCC
Q ss_conf 234454442211012268753100-1---------------------------22233222-2222222223-4676432
Q gi|254780602|r 242 AMTGLRIGYAAGALSLIKSMIVLQ-G---------------------------QQTSGACS-IAQWAAVEAL-NGPQDFV 291 (400)
Q Consensus 242 ~~~G~RiG~~v~~~~li~~l~~~~-~---------------------------~~~~~~~~-~~q~a~~~~l-~~~~~~~ 291 (400)
+..|--.|++...+++++.+-... . ...+|.+. +.-.++..++ ..+.+-+
T Consensus 227 ~~GGP~~G~~a~~~~l~r~lPgrivg~t~D~~G~~~~~ltlqtreqhIrRekatsnict~qal~al~a~~Y~~~lG~~GL 306 (398)
T cd00613 227 GGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGL 306 (398)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCH
T ss_conf 66887443266799877358998565047888874215441354333677752881643278999999999998488638
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEE
Q ss_conf 2222211000000024553047760330274089
Q gi|254780602|r 292 VNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFY 325 (400)
Q Consensus 292 ~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y 325 (400)
++..+....+.+++.+.|+++++..+ +++.||
T Consensus 307 ~~va~~~~~~A~Yl~~~L~~~~~~~~--~~~~~f 338 (398)
T cd00613 307 KEIAERAHLNANYLAKRLKEVGGVLP--FNGPFF 338 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCC--CCCCEE
T ss_conf 89999999999999999986389826--899866
No 278
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=99.29 E-value=2.7e-12 Score=94.99 Aligned_cols=347 Identities=15% Similarity=0.192 Sum_probs=183.2
Q ss_pred HHHHHHHHCCCC---HHHHHHHHHH-H------HHHCC--CCEEECCCCCCCC--CCCHHHHHHHHHHHHCCCCCC----
Q ss_conf 678898738975---8999999999-9------99869--9726656589749--889999999999983887569----
Q gi|254780602|r 3 FISNILRRVQPS---ATLVAAQRVR-D------LRSKG--IDVLCLTAGEPDF--DMPENVKYAVVRAMERGETKY---- 64 (400)
Q Consensus 3 ~~s~~~~~l~~s---~~~~~~~~~~-~------~~~~g--~~ii~l~~G~p~~--~~p~~i~~a~~~al~~~~~~Y---- 64 (400)
++++.+++++.. -+|.-.++.+ + ...+| +| |-.|=+|=-+ .=.|.|++||+++++.--.|=
T Consensus 6 ~f~~~id~~~~egrYR~F~~l~R~ag~FP~A~~~~~~g~~~d-VtVWCSNDYLGMgqHp~Vl~Am~~~~~~~GaGaGGTR 84 (427)
T TIGR01821 6 FFDKEIDKLHQEGRYRVFADLERLAGEFPFAQWHSPDGVKKD-VTVWCSNDYLGMGQHPKVLQAMHEALDKVGAGAGGTR 84 (427)
T ss_pred HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEECCCCCCEE-EEEEECCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 899987654038985002243635178985134265778101-7887212132048865479889999996388998753
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC---CCCC
Q ss_conf ---9877898999999998642101333322332334543333222222233--2232222333323222222---2222
Q gi|254780602|r 65 ---TAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVN--MGDEVLIPRPYWVSYPDMV---ALCG 136 (400)
Q Consensus 65 ---~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~--~Gd~Vlv~~P~y~~y~~~~---~~~g 136 (400)
+...-+-+|-+++|+--+| ..-+++|+| -=+...++.+++. || -|+..+= .||.+++ +..+
T Consensus 85 NIsGtn~~~v~LEaELAdLH~K-------E~ALvFtSg-yVaNda~L~tL~k~~P~-~~ifSD~--LNHASMI~GIr~S~ 153 (427)
T TIGR01821 85 NISGTNIYHVELEAELADLHGK-------ESALVFTSG-YVANDATLATLAKIIPG-CVIFSDE--LNHASMIEGIRRSG 153 (427)
T ss_pred CCCCCCHHHHHHHHHHHHHCCC-------CHHHHHHHH-HHHHHHHHHHHHHHCCC-EEEEECC--CCHHHHHHHHHHCC
T ss_conf 6566777899999999755173-------113567788-99999999999987088-5898365--56356999987478
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCCC---C-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCC
Q ss_conf 22222222222322210333100012---2-122012113542100001233332111223333320111012211-000
Q gi|254780602|r 137 GIPVFVDTQQDDNFQVSPEKLEQAIT---P-KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-HIV 211 (400)
Q Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~i~---~-~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~l~ 211 (400)
++-+-+ - +-|+++|++++. + ++|+|.+=+=.-=-|. -.-+++|||+ |++||.+=..||+|. .|
T Consensus 154 ~~k~iF----r---HND~~hLe~LL~~~d~~~PKiIAFESvYSMDGd---~aPi~eiCDl-A~kYGALTy~DEVHAVGl- 221 (427)
T TIGR01821 154 AEKFIF----R---HNDVAHLEKLLQSVDPNAPKIIAFESVYSMDGD---IAPIKEICDL-ADKYGALTYLDEVHAVGL- 221 (427)
T ss_pred CCEEEE----E---CCCHHHHHHHHHHCCCCCCCEEEEEEHCCCCCC---CCCHHHHHHH-HHHHCCCCEECCEEEECC-
T ss_conf 950563----0---599789999986477998956886100016787---2667889668-887188630011465336-
Q ss_pred CCCCCCCCCCCCC-------CC--------------CCC-EEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 0012233222111-------23--------------332-2574146544322344544422110122687531001222
Q gi|254780602|r 212 YRNCQFSNIVNVE-------PS--------------LYE-RTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT 269 (400)
Q Consensus 212 ~~~~~~~s~~~~~-------~~--------------~~~-~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~ 269 (400)
| |.+.-.++..+ .+ +-+ -+|.-+|+.|.||+=| ||+.++..|++.++.+..-..
T Consensus 222 Y-GprGgGIaErddfeshrasGiatPktndkGGakt~mhriDii~GTLaKAFG~~G---GYIa~~~~L~D~~RS~ApGFI 297 (427)
T TIGR01821 222 Y-GPRGGGIAERDDFESHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVG---GYIAASRKLIDAVRSYAPGFI 297 (427)
T ss_pred C-CCCCCCCCHHHHCCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCC---CEEECCCCCEEEEEECCCCCH
T ss_conf 5-888885120221100001576777657666520011100000165112234445---302055221320000378421
Q ss_pred CC---CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 33---2222222222223467643-2222221100000002455304776033027408998626410233211332248
Q gi|254780602|r 270 SG---ACSIAQWAAVEALNGPQDF-VVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIR 345 (400)
Q Consensus 270 ~~---~~~~~q~a~~~~l~~~~~~-~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~ 345 (400)
+. ||.+ ..+|.++..+.+.. =+..|..=+++-..+.+.|++. |+.+.+-. +- + +|-.. ++. .
T Consensus 298 FTTsLPP~~-~aGA~asIRhLK~~eg~~lR~~hQ~~~~~lK~~L~~~-GlPv~~~p-SH-I---vPv~i------GdA-~ 363 (427)
T TIGR01821 298 FTTSLPPAI-AAGALASIRHLKESEGQDLRRAHQERVKRLKKLLEAL-GLPVIDNP-SH-I---VPVII------GDA-A 363 (427)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC-CCCCCCCC-CE-E---EEEEE------CCH-H
T ss_conf 242155899-9999999999751376778999989999999999957-77754887-73-8---87676------686-8
Q ss_pred CHHHHHHHHHHHCCEEEECCCCCC--CCCE--EEEEEEC--CH---HHHHHHHHHH
Q ss_conf 989999999987397998350228--9972--8999629--99---9999999999
Q gi|254780602|r 346 TDLDFVNGLLEIEKVAVVQGSSFG--HGPS--IRISYAV--SD---AILEEACVRI 392 (400)
Q Consensus 346 ~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~~--iRis~~~--~~---e~l~~al~rl 392 (400)
.....++-||.+|||.|.| ..|- +.|. +||+=++ +. |.|.+||..+
T Consensus 364 ~~k~~SD~LL~~hGIYVQp-INyPTVpRG~ERLRitPtP~H~~~~id~Lv~AL~~~ 418 (427)
T TIGR01821 364 KCKKVSDLLLNKHGIYVQP-INYPTVPRGTERLRITPTPVHTDKLIDDLVEALLLV 418 (427)
T ss_pred HHHHHHHHHHHHCCCEEEC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 8989989888717815712-688889887502442688898877899999999999
No 279
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.28 E-value=8.7e-12 Score=91.86 Aligned_cols=271 Identities=12% Similarity=0.081 Sum_probs=164.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------
Q ss_conf 889999999999983887569987789899999999864210133332233233454333322222223322--------
Q gi|254780602|r 44 DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMG-------- 115 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~G-------- 115 (400)
.+++...+.+...+..+...-.-.++.-++-+.+..++.+.++.+ ..-.=.+|.|+++++.+++++.-+..
T Consensus 73 ~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 73 RVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC-CCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 867999999999873479981238315888999999999995799-7660679617079999999999999876644202
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCC--EEECCCCCCCCCCCCCCCCC
Q ss_conf 3------222233332322222222222222222222232221033310001221220--12113542100001233332
Q gi|254780602|r 116 D------EVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKW--LFLNSPSNPSGVVYSQNRLR 187 (400)
Q Consensus 116 d------~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~--i~l~nP~NPTG~v~s~~~l~ 187 (400)
. +|+++.-.-..+...+.+.|.....+++++. ++.+|+++++++|++.+-. |+-+-+.-|||.+ +.++
T Consensus 152 ~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi~ 227 (460)
T COG0076 152 GKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDIE 227 (460)
T ss_pred CCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEECC-CEEECHHHHHHHHHHHCCCCEEEEECCCCCCCCC---CCHH
T ss_conf 34468874994574312099999981885237875247-5056899999999874647649997268888777---8899
Q ss_pred CCCCCCCCCCCCEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH--HHHHHHH
Q ss_conf 111223333320111012211000--001223322211123332257414654432234454442211012--2687531
Q gi|254780602|r 188 ALADVLVRNPHVHIISDDIYEHIV--YRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS--LIKSMIV 263 (400)
Q Consensus 188 ~i~~~~a~~~~i~ii~De~Y~~l~--~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~--li~~l~~ 263 (400)
+|.++| +++++|+-+|.||..+. |.+....-...+ +. -..|++ ++.|....| .-+||+....+ +.+.+..
T Consensus 228 ~ia~ia-~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l-~~--vdSIt~-d~HK~g~aP-~~~G~il~rd~e~l~~~~~~ 301 (460)
T COG0076 228 ELADIA-EEYGIWLHVDAAFGGFLLPFLEPDGRWDFGL-EG--VDSITV-DGHKYGLAP-IGCGVVLFRDEEALRRILIF 301 (460)
T ss_pred HHHHHH-HHCCCCEEEECCCCCHHHHCCCCCCHHHCCC-CC--CEEEEE-CCCCCCCCC-CCCEEEEEECHHHHHHHHHC
T ss_conf 999999-9769978987344002110247422535178-88--208998-864277888-87069999688984677612
Q ss_pred HCCCCCC--------CCCCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-CCCCEEEE
Q ss_conf 0012223--------322222-----2222222346764322222211000000024553047760330-27408998
Q gi|254780602|r 264 LQGQQTS--------GACSIA-----QWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI-PDGAFYLY 327 (400)
Q Consensus 264 ~~~~~~~--------~~~~~~-----q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~-p~g~~y~~ 327 (400)
...+... ..+.+. |++....| +.+-+.++.+...+..+.+.+.|++.+.+++.. |...-.+|
T Consensus 302 ~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l--G~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 302 ADYYLPGGGIPNFTILGSRPGRQALALYANLRRL--GREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred CCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEE
T ss_conf 3667787786663688505418999999999996--788899999999999999999986478827633886507999
No 280
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.26 E-value=8.3e-12 Score=91.97 Aligned_cols=329 Identities=17% Similarity=0.153 Sum_probs=159.0
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|- ..+. -+|.|.+|+++.++.+.+ |+.+ ...++ ..|+.+.+... ..+.|.+++++++|..
T Consensus 46 dG~~YlD~~~g~~~~~lGH~~p~i~~Ai~~Ql~~~~~-~~~~-~~~~~--~~ae~l~~~~p---~~~~v~F~nSGsEA~e 118 (431)
T PRK06209 46 DGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQDGCN-FTRP-SAIEL--DAAELFLDLID---GAEMVKFCKNGSDATS 118 (431)
T ss_pred CCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHCCC-CCCC-CHHHH--HHHHHHHHHCC---CCCEEEECCCCCHHHH
T ss_conf 8799998466499897737969999999999975265-5476-58999--99999997589---8656987278837899
Q ss_pred CCCCCCC-CCCCC-CCC-CCCCCCCCCCCCCCCCCCCCC--CCCCC---CCCCC-CHHHHHHCCCCC---CCCCEEECCC
Q ss_conf 2222223-32232-222-333323222222222222222--22222---23222-103331000122---1220121135
Q gi|254780602|r 106 NALMATV-NMGDE-VLI-PRPYWVSYPDMVALCGGIPVF--VDTQQ---DDNFQ-VSPEKLEQAITP---KTKWLFLNSP 173 (400)
Q Consensus 106 ~~~~~~~-~~Gd~-Vlv-~~P~y~~y~~~~~~~g~~~~~--v~~~~---~~~~~-~d~~~l~~~i~~---~~k~i~l~nP 173 (400)
.+++..- -.|.. |+. ..-.|..+... ..|..+.. +|-.. ...|. -|++++++.+.+ ++-+|++ -|
T Consensus 119 ~AlklAR~~tgr~~i~~~~~~~~~~~~~~--~~g~~~~~~g~~~~~~~~~~~~~y~d~~~le~~~~~~~~~iAAvIv-EP 195 (431)
T PRK06209 119 AAVRLARAYTGRDLVARCADHPFFSTDDW--FIGTTPMSAGIPASVSALTKTFRYNDIASLEALFEDYPGRIACVIL-EP 195 (431)
T ss_pred HHHHHHHHHHCCCEEEECCCCCEEECCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE-EC
T ss_conf 99999999759953777057755643566--5578765578887545666564765599999987645566678885-03
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 42100001233332111223333320111012211000001223322211123332257414654432234454442211
Q gi|254780602|r 174 SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG 253 (400)
Q Consensus 174 ~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~ 253 (400)
- .|..-+++.++++-++| +++|+++|.||+...|.....-......+.|+ |+ +++|..+ .|+-+|.+++
T Consensus 196 i--~g~~p~~~fl~~lr~lc-~~~giLLI~DEV~TGfR~g~~~a~~~~gv~PD-----i~--t~gK~ig-gG~Pi~Av~g 264 (431)
T PRK06209 196 A--TADEPQDNFLHEVQRLC-HENGALFILDEMITGFRWHMRGAQKLYGIVPD-----LS--CFGKAMG-NGFSISALAG 264 (431)
T ss_pred C--CCCCCCHHHHHHHHHHH-HHCCCEEEECCCCCCCCCCCCCHHHHCCCCCC-----EE--EEHHHHH-CCCCCEEEEE
T ss_conf 1--37789789999999999-87290799705602661675227662089987-----99--8701322-8888057778
Q ss_pred HHHHHHHHHHHC--------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC---CCCE-EEE
Q ss_conf 012268753100--------1222332222222222223467--6432222221100000002455304---7760-330
Q gi|254780602|r 254 ALSLIKSMIVLQ--------GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV---PGIR-YMI 319 (400)
Q Consensus 254 ~~~li~~l~~~~--------~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~---~g~~-~~~ 319 (400)
.+++++...... -..+.+.+.++..|+++.|+.- ++.++ ..++.-+++.+.|+++ .++. -+.
T Consensus 265 ~~eim~~~~~~~~~~~~~f~~~~T~~g~p~~~AAalatL~~~~~~~l~~----~~~~~G~~L~~~l~~l~~~~~~~~~vr 340 (431)
T PRK06209 265 KREYMELGGLEHTDFERVFLLSTTHGAETHALAAAIATMAIYREEDVIE----RLWEQGAKLAAGVNEAAAEHGLQDHVR 340 (431)
T ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHH----HHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 6997640355567866541104577888799999999999998544999----999999999999999997679977997
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHH----HHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 274089986264102332113322489899----9999998739799835022899728999629999999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLD----FVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~----~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~ 395 (400)
-.| +.+.+.+.... .....+.+ |.+.++ ++||+. | .+-+|++.++++|++.++.+++.
T Consensus 341 ~~G-~~~~~~f~~~~-------~~~~~~~~~~~~~~~~ml-~~Gvl~-~--------~~~iS~aHt~~di~~~l~a~~~a 402 (431)
T PRK06209 341 VSG-RPCCLTYSTLD-------GNGQPSQAFRTLFLQEMI-RRGVLM-P--------SLVVSYAHGDADIERTIDAVHGA 402 (431)
T ss_pred EEE-EEEEEEEECCC-------CCCCCHHHHHHHHHHHHH-HCCEEH-H--------HHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 640-13378993244-------556876999999999999-589751-2--------47760533999999999999999
Q ss_pred HHHCC
Q ss_conf 98609
Q gi|254780602|r 396 CHSLQ 400 (400)
Q Consensus 396 l~~l~ 400 (400)
++.||
T Consensus 403 l~~l~ 407 (431)
T PRK06209 403 LGVYR 407 (431)
T ss_pred HHHHH
T ss_conf 99999
No 281
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=99.25 E-value=2.9e-11 Score=88.65 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCC-CCCCCCC
Q ss_conf 9999999864210133332233233454333322222223322322223333-2322222222222222222-2222322
Q gi|254780602|r 73 LREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFVD-TQQDDNF 150 (400)
Q Consensus 73 lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v~-~~~~~~~ 150 (400)
+-+|||+|+ |. |.+=+|+||.++=+.++.++|.+||.|++-.-. |..|- +++.+|.++..|| -...-.|
T Consensus 57 ~~daLA~Fl----G~----D~~R~t~GARe~KfaVMhalC~~GD~vV~D~~AHYtsyv-AAEragl~v~eVPy~~g~P~Y 127 (381)
T TIGR02539 57 LEDALAEFL----GM----DVVRVTHGAREGKFAVMHALCKEGDVVVLDGLAHYTSYV-AAERAGLNVKEVPYETGHPEY 127 (381)
T ss_pred HHHHHHHHH----CC----CEEECCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHH-HHHHCCCEEEECCCCCCCCEE
T ss_conf 455426672----79----745406775024578876408998989985874544589-997549727881655888607
Q ss_pred CCHHHHHHCCCCC-------CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2103331000122-------122012113542100001233332111223333320111012211000001223322211
Q gi|254780602|r 151 QVSPEKLEQAITP-------KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNV 223 (400)
Q Consensus 151 ~~d~~~l~~~i~~-------~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~ 223 (400)
.+++|...+.|.+ .+++++|++|.-==|++ .+-++++++| |++++.++..-||.- |.=+.|...+
T Consensus 128 ~v~~e~Y~~viee~~d~~G~~~~LallThvDG~YGNL---~DA~kva~vc-~~~gvPlLLNCAY~v----GRmPv~~ke~ 199 (381)
T TIGR02539 128 KVDPEGYKEVIEEVEDESGKPVALALLTHVDGEYGNL---ADAKKVAKVC-REKGVPLLLNCAYTV----GRMPVSAKEI 199 (381)
T ss_pred EECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC---HHHHHHHHHH-HHCCCCEEECCCCEE----EEECCCCCCC
T ss_conf 6416678888865520279883489984026886751---1245687665-420786221245052----1003157777
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC---C------------CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1233322574146544322344544422110122687531001---2------------223322222222222234676
Q gi|254780602|r 224 EPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQG---Q------------QTSGACSIAQWAAVEALNGPQ 288 (400)
Q Consensus 224 ~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~---~------------~~~~~~~~~q~a~~~~l~~~~ 288 (400)
-+ -++++|-.|+.+..| -||.+.-.++.-+.+.+-.+ . +..|.+. ..-++.++ ..-
T Consensus 200 ~~-----DFiVGSGHKSMAASa-P~GvLa~~eE~~~~v~r~SslrGdvsG~~~~~KEvElLGCT~r--Gap~~Tlm-ASf 270 (381)
T TIGR02539 200 KA-----DFIVGSGHKSMAASA-PCGVLAMSEEWEDKVLRKSSLRGDVSGRKFPVKEVELLGCTSR--GAPIVTLM-ASF 270 (381)
T ss_pred CC-----CEEEECCCCHHHHCC-CEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCCCC--HHHHHHHH-HCC
T ss_conf 87-----677806851322126-6002145422234011023210033663447412774486324--04799997-328
Q ss_pred CCCCCCCCCCC---CCCCCHHHHHHCCCCCEE--EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEE
Q ss_conf 43222222110---000000245530477603--3027408998626410233211332248989999999987397998
Q gi|254780602|r 289 DFVVNNRKIFE---YRRDLCVAQLQGVPGIRY--MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVV 363 (400)
Q Consensus 289 ~~~~~~~~~~~---~~r~~~~~~L~~~~g~~~--~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~ 363 (400)
.++.+..+.+. ++-+++.+.|+++.|++= .+|.-==.+....|.+. ....+..+...-|.+.| ++.||.
T Consensus 271 P~VveRV~~Wd~Ev~ktRy~v~eLE~igG~~QlG~kPk~HDLv~FEtPgf~---Eia~~~kr~GyFLY~EL-KkRgi~-- 344 (381)
T TIGR02539 271 PHVVERVKRWDEEVKKTRYFVAELEDIGGFKQLGVKPKEHDLVKFETPGFH---EIAKKHKRRGYFLYEEL-KKRGIV-- 344 (381)
T ss_pred CHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCH---HHHCCCCCCCCCHHHHH-HHCCCE--
T ss_conf 101122023156677765788876421788864868882564144488401---34144879776405665-315830--
Q ss_pred CCCCCCCCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 350228997289996-2999999999999999998609
Q gi|254780602|r 364 QGSSFGHGPSIRISY-AVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 364 pG~~Fg~~~~iRis~-~~~~e~l~~al~rl~~~l~~l~ 400 (400)
|..=|.-.+|-+|. +...|+++--++-+++.+++.+
T Consensus 345 -GI~~G~Tk~~K~SvYGL~~Eqv~~Vv~sf~eI~e~~~ 381 (381)
T TIGR02539 345 -GIRSGQTKEIKLSVYGLTKEQVEYVVDSFKEIVEEYK 381 (381)
T ss_pred -ECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf -0178874277643312752114444678999998549
No 282
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.24 E-value=5.6e-11 Score=86.94 Aligned_cols=350 Identities=15% Similarity=0.124 Sum_probs=179.9
Q ss_pred CCCCEEECCCC--CCCCC-CCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658--97498-89999999999983887-5699877898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAG--EPDFD-MPENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G--~p~~~-~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
+|+..|||..| -.++. -+|.|++|+.+.++.-. +.+....+ +-..++|+.+.....-+ ..+.+++++.++++.
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~--e~~v~~ae~L~~~~p~~-~~~~~~f~~sGaeA~ 130 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYY--EPYVELAEKLTALAPGS-GLKKVFFGNSGAEAV 130 (447)
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHHHHHCCCC-CCCEEEECCCCHHHH
T ss_conf 999898825676201037899899999999999730135776663--36999999999758865-677699568837789
Q ss_pred CCCCCCC-CCCC-CCCCCCCCCCCCCCC-CCCCC---------------CCCCCCCCCCCCCCCC--------CHHHHHH
Q ss_conf 2222222-3322-322223333232222-22222---------------2222222222223222--------1033310
Q gi|254780602|r 105 FNALMAT-VNMG-DEVLIPRPYWVSYPD-MVALC---------------GGIPVFVDTQQDDNFQ--------VSPEKLE 158 (400)
Q Consensus 105 ~~~~~~~-~~~G-d~Vlv~~P~y~~y~~-~~~~~---------------g~~~~~v~~~~~~~~~--------~d~~~l~ 158 (400)
.+++..- ...| ..||...=.|-.-.. ...+. +...+++|-..-+.|. -..+.++
T Consensus 131 E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e 210 (447)
T COG0160 131 EAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIE 210 (447)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999985898489978865563266687545766533578899998588168865567555663555689999999
Q ss_pred CCCC------CCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 0012------21220121135-4210000-12333321112233333201110122110000012233222111233322
Q gi|254780602|r 159 QAIT------PKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYER 230 (400)
Q Consensus 159 ~~i~------~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~ 230 (400)
+.+. .++-++++ -| +.=.|.+ -+++.++++.++| ++|++++|.||+-..+.=.| .+++.. ..+-
T Consensus 211 ~~i~~~~~~~~~vAaiI~-EpIQgegG~~v~p~~fl~~l~~~~-~~~gillI~DEVQtG~GRTG----~~fa~E--~~gv 282 (447)
T COG0160 211 RALFDLEVGPEEVAAIII-EPIQGEGGIIVPPKGFLKALRKLC-REHGILLIADEVQTGFGRTG----KMFAFE--HFGV 282 (447)
T ss_pred HHHHHHCCCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCC----CCHHHH--HCCC
T ss_conf 998740478775469998-421078997479899999999999-98198899956655888662----601224--2099
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 57414654432234454442211012268753100122233222222222222346764322222211000000024553
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQ 310 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~ 310 (400)
.-=+-++||..+- |+-+|.+++.+++..........+ .+-+.+...++.+.|+.-++ +.+.+.-.+.-+++.+.|.
T Consensus 283 ~PDivt~aK~ig~-G~Pl~avv~r~ei~~~~~g~~~~T-f~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~ 358 (447)
T COG0160 283 EPDIVTLAKSLGG-GLPLSAVVGRAEIMDWPPGGHGGT-FGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLE 358 (447)
T ss_pred CCCEEEECCCCCC-CCCEEEEECCHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH
T ss_conf 9878985333457-872067744577601477654777-78698999999999999987--4299999999999999999
Q ss_pred CCCC-C-EEEECCC-CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHH
Q ss_conf 0477-6-0330274-0899862641023321133224898999999998739799835022899728999--62999999
Q gi|254780602|r 311 GVPG-I-RYMIPDG-AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAIL 385 (400)
Q Consensus 311 ~~~g-~-~~~~p~g-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l 385 (400)
++.. . .+-...| |+++-+++-+-.....+.. .--..++.++ .+.|+++..+-.+ .+-+||. +..+++++
T Consensus 359 ~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~---~~~~~i~~~~-~~~Glil~~~G~~--~nviRi~PPL~is~e~~ 432 (447)
T COG0160 359 ELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDA---ELAAKIVARA-FERGLLLLTCGPH--GNVLRILPPLTISDEEL 432 (447)
T ss_pred HHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCH---HHHHHHHHHH-HHCCCEEECCCCC--CCEEEEECCCCCCHHHH
T ss_conf 9986467442124465078999833787789999---9999999999-9869888545787--86799828954389999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999860
Q gi|254780602|r 386 EEACVRIKRFCHSL 399 (400)
Q Consensus 386 ~~al~rl~~~l~~l 399 (400)
+++++.|.+.++.+
T Consensus 433 d~~l~il~~al~~~ 446 (447)
T COG0160 433 DEGLDILEEALKEA 446 (447)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999854
No 283
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.24 E-value=7.6e-11 Score=86.11 Aligned_cols=350 Identities=16% Similarity=0.202 Sum_probs=203.9
Q ss_pred HHHHHHHCCCCEEECCCCCC--CCC-------CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999986997266565897--498-------899999999999838875699877898999999998642101333322
Q gi|254780602|r 22 RVRDLRSKGIDVLCLTAGEP--DFD-------MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSD 92 (400)
Q Consensus 22 ~~~~~~~~g~~ii~l~~G~p--~~~-------~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e 92 (400)
+.+.++.+|-+...|-..+. |+- ....--. ++-.+.-.|..+++...|++++.+.+ | -+
T Consensus 2 R~~al~~agyN~F~L~s~dV~iDLLTDSGT~AMSd~QWA----a~m~gDesYAGs~sf~~l~~av~d~~----g----~~ 69 (431)
T cd00617 2 RERALKEAGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWA----AMMLGDEAYAGSKSFYDLEDAVQDLF----G----FK 69 (431)
T ss_pred HHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHH----HHHCCCHHHCCCCCHHHHHHHHHHHC----C----CC
T ss_conf 579998749982358747667970135896658889999----98705653257802899999999864----9----97
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCC--CCHHHHHHCCCCC-
Q ss_conf 3323345433332222222332232222333323222222222222222222222------322--2103331000122-
Q gi|254780602|r 93 QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQD------DNF--QVSPEKLEQAITP- 163 (400)
Q Consensus 93 ~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~------~~~--~~d~~~l~~~i~~- 163 (400)
+|++|.-+..+=..++.+++.||+. +..+-.|+..+.-++..|++++.++.++. .-| .+|++.|++.|.+
T Consensus 70 ~v~PtHQGRaAE~iLf~~~~k~g~~-v~~N~hFdTTrahie~~G~~~vdl~~~ea~d~~~~~pFKGN~Dl~kLe~~i~~~ 148 (431)
T cd00617 70 HIIPTHQGRGAENILFSILLKPGRT-VPSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV 148 (431)
T ss_pred CEEECCCCHHHHHHHHHHHCCCCCE-ECCCCCCCCHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 1247687679999999983679988-446878732589999769978733150004857778848888999999999873
Q ss_pred ---CCCCEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEECCCCC-C---CCCC---CCCCCCCCCCCCCCCCCE-E
Q ss_conf ---1220121135421-0000123333211122333332011101221-1---0000---012233222111233322-5
Q gi|254780602|r 164 ---KTKWLFLNSPSNP-SGVVYSQNRLRALADVLVRNPHVHIISDDIY-E---HIVY---RNCQFSNIVNVEPSLYER-T 231 (400)
Q Consensus 164 ---~~k~i~l~nP~NP-TG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y-~---~l~~---~~~~~~s~~~~~~~~~~~-~ 231 (400)
+...|++.--||- .|+=.|-+.++++.++| ++|++.++.|.+= . .|+- .+..-.|+..+..++.+. -
T Consensus 149 g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la-~~~giplvlDaaRfaENAyFIk~rE~gy~d~si~eI~rEmfs~aD 227 (431)
T cd00617 149 GAENIPYIVLTITNNTAGGQPVSMANLREVRELA-HKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYAD 227 (431)
T ss_pred CCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH-HHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8666108999986368788566789999999999-980997998766788768999843530247999999999985402
Q ss_pred EEECCCCCCCCCCCCCC-CCCCCH-HHHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCC
Q ss_conf 74146544322344544-422110-1226875310012-----22332222222222223467--643222222110000
Q gi|254780602|r 232 LVVNGVSKAYAMTGLRI-GYAAGA-LSLIKSMIVLQGQ-----QTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRR 302 (400)
Q Consensus 232 i~~~S~SK~~~~~G~Ri-G~~v~~-~~li~~l~~~~~~-----~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r 302 (400)
.+.-|..|...+ ++ |++..+ +++.++++...-. +..+++.--..+++..|.+. ++|+.... ..-
T Consensus 228 g~tmSaKKD~~v---niGG~ia~~D~~l~~~~~~~~i~~EGf~TYGGlaGRD~eAlA~GL~E~~d~~yl~~Ri----~qv 300 (431)
T cd00617 228 GCTMSAKKDGLV---NIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRHRV----EQV 300 (431)
T ss_pred EEEEEECCCCCC---CCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHH----HHH
T ss_conf 789970314532---4556788577999999975432005874435632534999865407543679999779----999
Q ss_pred CCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC-CC-CCCCC---------
Q ss_conf 00024553047760330274089986264102332113322489899999999873979983-50-22899---------
Q gi|254780602|r 303 DLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ-GS-SFGHG--------- 371 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~-~Fg~~--------- 371 (400)
+++.+.|.+. |+.+..|-||--+++|...+.... +. .......|+..|..+.||-.+- |+ .||.+
T Consensus 301 ~yL~~~L~~~-GvPvv~P~GGHav~iDA~~flPhi-p~--~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd~~t~e~~~~ 376 (431)
T cd00617 301 RYLGDRLDEA-GVPIVEPAGGHAVFIDAREFLPHI-PQ--EQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYP 376 (431)
T ss_pred HHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCCC-CH--HHCCHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCC
T ss_conf 9999999988-996666897438997467746899-81--4391899999999970945685402002548887666788
Q ss_pred --CEEEEEEEC---CH---HHHHHHHHHHHHHH
Q ss_conf --728999629---99---99999999999999
Q gi|254780602|r 372 --PSIRISYAV---SD---AILEEACVRIKRFC 396 (400)
Q Consensus 372 --~~iRis~~~---~~---e~l~~al~rl~~~l 396 (400)
.-+|+++-. +. +-+.+++..+.+=-
T Consensus 377 ~~ElvRLAiPRRvYT~~H~dyva~~l~~l~~~r 409 (431)
T cd00617 377 ELELVRLAIPRRVYTQDHMDYVAAAVIALYERR 409 (431)
T ss_pred CCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 622256713502035879999999999999558
No 284
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.23 E-value=1.1e-11 Score=91.20 Aligned_cols=141 Identities=22% Similarity=0.273 Sum_probs=101.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 23345433332222222332232222333323----22222222222222222222232221033310001221220121
Q gi|254780602|r 95 IVGTGAKHVIFNALMATVNMGDEVLIPRPYWV----SYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 95 ~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~----~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l 170 (400)
+.+..++.++..++..++.+||+|+-..--|. .+...++..|.++.+++. .|++.++++|+++||+||+
T Consensus 81 ~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~-------~d~~~~~~aI~~nTkavf~ 153 (426)
T COG2873 81 LAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDP-------DDPENFEAAIDENTKAVFA 153 (426)
T ss_pred HHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEECC-------CCHHHHHHHHCCCCCEEEE
T ss_conf 333133589999999864588706751323375488999888864817999279-------9989999873822406878
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 13542100001233332111223333320111012211000001223322211123332257414654432234454442
Q gi|254780602|r 171 NSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGY 250 (400)
Q Consensus 171 ~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 250 (400)
-+=.||-+.+.+ +++|+++| +++++.+|+|.....- +-+.|-...--|++.|+||..+--|--+|-
T Consensus 154 EtigNP~~~v~D---ie~ia~iA-h~~gvpliVDNT~atp----------yl~rP~~hGADIVvHS~TK~igGhGt~iGG 219 (426)
T COG2873 154 ETIGNPGLDVLD---IEAIAEIA-HRHGVPLIVDNTFATP----------YLCRPIEHGADIVVHSATKYIGGHGTAIGG 219 (426)
T ss_pred EECCCCCCCCCC---HHHHHHHH-HHCCCCEEEECCCCCC----------EECCHHHCCCCEEEEEECCCCCCCCCCCCE
T ss_conf 751688766357---79999999-8759938983677730----------043665618877998603012677654240
Q ss_pred CCCHHH
Q ss_conf 211012
Q gi|254780602|r 251 AAGALS 256 (400)
Q Consensus 251 ~v~~~~ 256 (400)
++.+..
T Consensus 220 ~iVD~G 225 (426)
T COG2873 220 VIVDGG 225 (426)
T ss_pred EEEECC
T ss_conf 798677
No 285
>KOG1358 consensus
Probab=99.23 E-value=2.5e-10 Score=82.92 Aligned_cols=340 Identities=18% Similarity=0.186 Sum_probs=180.4
Q ss_pred HCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHCC-C------CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 8699726656589-74988999999999998388-7------56998778989999999986421013333223323345
Q gi|254780602|r 28 SKGIDVLCLTAGE-PDFDMPENVKYAVVRAMERG-E------TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 28 ~~g~~ii~l~~G~-p~~~~p~~i~~a~~~al~~~-~------~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
..|+|++||...| -+|.-.+.+++.+...++.- . .-|+...=+..|-+.||+++ | .++.|+...|
T Consensus 91 i~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~----G---~E~aivYs~g 163 (467)
T KOG1358 91 IDGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM----G---TEDAIVYSYG 163 (467)
T ss_pred ECCCEEECCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCHHHHHHHH----C---CCCEEEECCC
T ss_conf 63840011121003554056778999999999738877678764312211046677898750----8---8642663266
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC------------CC
Q ss_conf 433332222222332232222333-32322222222222222222222232221033310001221------------22
Q gi|254780602|r 100 AKHVIFNALMATVNMGDEVLIPRP-YWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK------------TK 166 (400)
Q Consensus 100 ~~~~l~~~~~~~~~~Gd~Vlv~~P-~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~------------~k 166 (400)
= ..+..++.+++..||.|.+..- .|.. ...+++..-++++..- -|+++++....+. +|
T Consensus 164 F-~ti~S~ipafsKrGDIi~~de~~nfaI-q~GlqlSRS~i~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~R 234 (467)
T KOG1358 164 F-STIESAIPAFSKRGDIIFVDEAVNFAI-QKGLQLSRSTISYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTR 234 (467)
T ss_pred C-CHHHHCCHHHHCCCCEEEEEHHHHHHH-HHHHHHHHHEEEEECC-------CCHHHHHHHCCCCCHHHHHCCCCCCCE
T ss_conf 3-003200012311476799862102998-8777640200378547-------887889975457622233144445413
Q ss_pred CEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC--CCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 0121135-4210000123333211122333332011101221100000--122332221112333225741465443223
Q gi|254780602|r 167 WLFLNSP-SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYR--NCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 167 ~i~l~nP-~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~--~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
-+++.-- --+||...+. .+|++. ..++...||.||-|+.=+.+ |.-.+.-.... +.+--+++.|++-..+.
T Consensus 235 rfiv~EGl~~N~g~i~pl---~~iv~l-k~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~--~~~iDiv~~sm~~alas 308 (467)
T KOG1358 235 RFIVVEGLYANTGDICPL---PEIVKL-KNKYKFRVILDESLSFGVLGKTGRGVTEHFGVP--ITDIDIVTASMETALAS 308 (467)
T ss_pred EEEEEEEECCCCCCCCCC---HHHHHH-HHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCC--CCCEEEEEECCCCCCCC
T ss_conf 799997640477750350---999998-766258999833333243035686632468988--03112565114444314
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCC-CC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE-
Q ss_conf 44544422110122687531001222-33--222222222222346764322222211000000024553047760330-
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQT-SG--ACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI- 319 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~-~~--~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~- 319 (400)
.| ||.++ ..++-...++.+... ++ .+.....++..++. -.+|-.++.+.++..-..+-..|+...++.+..
T Consensus 309 ~G---gFc~G-~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~-i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~ 383 (467)
T KOG1358 309 GG---GFCAG-KSFIADHQRLSGSGYCFSASLPPYLAGAAIKAIL-IEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGS 383 (467)
T ss_pred CC---CEEEC-CEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHH-HHHHCCCHHHHHHCCCCCCCHHHHCCCCEEEECC
T ss_conf 67---54325-5236753001566256513475555456777777-7761840222222025210466604772598468
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC------CCCCEEEEEEE--CCHHHHHHHHHH
Q ss_conf 2740899862641023321133224898999999998739799835022------89972899962--999999999999
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF------GHGPSIRISYA--VSDAILEEACVR 391 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F------g~~~~iRis~~--~~~e~l~~al~r 391 (400)
|.. --+.+.+........ +...--.++++..+.+ +++++-...- -.++.+||++. .++|+++.|.+-
T Consensus 384 ~~S-Pi~hl~l~~~~~s~e---~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ 458 (467)
T KOG1358 384 PES-PIIHLQLERSYGSRE---KEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAEL 458 (467)
T ss_pred CCC-CEEEEEECCCCCCHH---HHHHHHHHHHHHHHHH-CCEEHHHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 677-200123245556667---7999999999999862-53100314553033479998579987079999999999999
Q ss_pred HHHHHHHC
Q ss_conf 99999860
Q gi|254780602|r 392 IKRFCHSL 399 (400)
Q Consensus 392 l~~~l~~l 399 (400)
|+++.++.
T Consensus 459 ik~~~~~~ 466 (467)
T KOG1358 459 IKEVASAV 466 (467)
T ss_pred HHHHHHHH
T ss_conf 99999864
No 286
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.19 E-value=1.1e-10 Score=85.18 Aligned_cols=365 Identities=15% Similarity=0.190 Sum_probs=208.9
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC--CC-------CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 738975899999999999986997266565897--49-------889999999999983887569987789899999999
Q gi|254780602|r 9 RRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEP--DF-------DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 9 ~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p--~~-------~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
+-++|=......++.+.++.+|-+...|-..+. |+ .....--. ++..+.-.|+.+.....|++++.+
T Consensus 14 k~Vepi~~~treeR~~al~~AgyN~F~L~s~dV~IDlLTDSGT~AMSd~QwA----amm~gDEsYAGs~sf~~l~~~v~d 89 (459)
T PRK13237 14 KSVEPVKMTTREEREQAIKEAGYNTFLLRSEDVYIDLLTDSGTNAMSDKQWA----GMMIGDEAYAGSRNFYHLEATVQE 89 (459)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEECCCCCCEEEECEECCCCCCCCHHHHH----HHHHCCHHHHCCCCHHHHHHHHHH
T ss_conf 6785358999999999999818983037656614665115884426799999----987304555324018999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CC--C
Q ss_conf 864210133332233233454333322222223322322223333232222222222222222222223------22--2
Q gi|254780602|r 80 KFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDD------NF--Q 151 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~------~~--~ 151 (400)
.+ | -++|++|.-+..+=..++..++.|||.| ..+-.|..-+.-+++.|++++.+++++.. -| .
T Consensus 90 if----g----~~~viPtHQGRaAE~IL~~~l~k~G~~v-p~N~hFdTTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN 160 (459)
T PRK13237 90 YY----G----FKHVVPTHQGRGAENLLSRIAIKPGQYV-PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSLHPFKGN 160 (459)
T ss_pred HC----C----CCEEEECCCCHHHHHHHHHHHCCCCCEE-CCCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCC
T ss_conf 72----9----9524066776668999999971589895-7886866408999965987874135202586778896887
Q ss_pred CHHHHHHCCCCC----CCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC-C---CCCC---CCCCCCC
Q ss_conf 103331000122----122012113542-10000123333211122333332011101221-1---0000---0122332
Q gi|254780602|r 152 VSPEKLEQAITP----KTKWLFLNSPSN-PSGVVYSQNRLRALADVLVRNPHVHIISDDIY-E---HIVY---RNCQFSN 219 (400)
Q Consensus 152 ~d~~~l~~~i~~----~~k~i~l~nP~N-PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y-~---~l~~---~~~~~~s 219 (400)
+|++.|++.|.+ +...|++.--|| -.|+=.|-+.++++.++| ++|++.++.|.+= . .|+- ++..-.|
T Consensus 161 ~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la-~~~gipl~lDaaRfaENAyFIk~RE~gy~~~s 239 (459)
T PRK13237 161 VDLDKLQKLIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELC-DKHGIKVFFDATRCVENAYFIKEREEGYQDKS 239 (459)
T ss_pred CCHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHH-HHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 79999999998748556008999985268788064689999999999-98099699876678876899983442014899
Q ss_pred CCCCCCCCCCE-EEEECCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHCCCC-----CCCCCCCCCCCCCCCCCCC--CCC
Q ss_conf 22111233322-57414654432234454442211-012268753100122-----2332222222222223467--643
Q gi|254780602|r 220 IVNVEPSLYER-TLVVNGVSKAYAMTGLRIGYAAG-ALSLIKSMIVLQGQQ-----TSGACSIAQWAAVEALNGP--QDF 290 (400)
Q Consensus 220 ~~~~~~~~~~~-~i~~~S~SK~~~~~G~RiG~~v~-~~~li~~l~~~~~~~-----~~~~~~~~q~a~~~~l~~~--~~~ 290 (400)
+..+..++.+. -...-|.-|...+. .-||+.. ++++.+++....-.. ..+++.--..+++..|.+. ++|
T Consensus 240 i~eI~rEmfs~aDg~tmSaKKD~~vn--iGG~ia~~d~~l~~~~~~~~i~~EGf~TYGGlagRDmeAlA~GL~E~~de~y 317 (459)
T PRK13237 240 IKEILKEMFSYADGATMSGKKDCLVN--IGGFLAMNDDELFQEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQDDY 317 (459)
T ss_pred HHHHHHHHHHHHHEEEEEECCCCCCC--CCCEEEECCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCHHHHCCHHH
T ss_conf 99999999744027999832025346--5567985779999999855112058755456226469999634375436799
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC-CC-CC
Q ss_conf 22222211000000024553047760330274089986264102332113322489899999999873979983-50-22
Q gi|254780602|r 291 VVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ-GS-SF 368 (400)
Q Consensus 291 ~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~-~F 368 (400)
+.... ..-+++.+.|.+. |+.+..|-||--+++|...+.... +. .......++..|..+.||-.+- |+ .|
T Consensus 318 l~~Ri----~qv~yl~~~L~~~-GVPvv~P~GGHav~iDA~~fLPhi-p~--~~fPa~aLa~~LY~~~GIR~~E~Gs~~~ 389 (459)
T PRK13237 318 IRHRI----GQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPHI-PQ--DQFPAQALAAELYIDSGVRSMERGIVSA 389 (459)
T ss_pred HHHHH----HHHHHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCCC-CH--HHCCHHHHHHHHHHHCCCCEEEECCHHC
T ss_conf 99889----9999999999987-997036898528997467756899-80--3392999999999971934685401011
Q ss_pred CCC-----------CEEEEEEEC---CH---HHHHHHHHHHHHHHH
Q ss_conf 899-----------728999629---99---999999999999998
Q gi|254780602|r 369 GHG-----------PSIRISYAV---SD---AILEEACVRIKRFCH 397 (400)
Q Consensus 369 g~~-----------~~iRis~~~---~~---e~l~~al~rl~~~l~ 397 (400)
|.+ .-+|+++-. +. +-+.+++..+.+=-+
T Consensus 390 grdp~tg~~~~~~~ElvRLAiPRRvYT~sH~dyva~~l~~l~~~r~ 435 (459)
T PRK13237 390 GRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVAESVIKLYKHRE 435 (459)
T ss_pred CCCCCCCCCCCCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 6688875656876333677235020358899999999999996487
No 287
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=99.18 E-value=1.3e-11 Score=90.74 Aligned_cols=241 Identities=15% Similarity=0.216 Sum_probs=136.1
Q ss_pred EECCC--CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 66565--8974988999999999998388756998778989999999986421-01333322332334543333222222
Q gi|254780602|r 34 LCLTA--GEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRD-NDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 34 i~l~~--G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~-~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
|.||. +++.|..|+ .+-|+- .|.| .|.-+.+=+.+. .|- +=|||+-++.||.++..+
T Consensus 26 IyLSttY~F~gF~~PR-------------~yDYsR-sGNP-TRd~l~~aLA~LE~G~-----~AVvT~~GMsAI~L~~~~ 85 (383)
T TIGR02080 26 IYLSTTYNFAGFNEPR-------------AYDYSR-SGNP-TRDILQQALAELEGGA-----GAVVTNSGMSAIDLVTTA 85 (383)
T ss_pred CCCCCCCCCCCCCCCC-------------CCCCCC-CCCC-CHHHHHHHHHHHHCCC-----CCEECCCHHHHHHHHHHH
T ss_conf 6356676755677798-------------766688-9897-5658999999984899-----825668568988766431
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC-CCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 23322322223333232-2222222222222222222232221033310001221-220121135421000012333321
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVS-YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK-TKWLFLNSPSNPSGVVYSQNRLRA 188 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~-y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~k~i~l~nP~NPTG~v~s~~~l~~ 188 (400)
+++|+|=|+.|-=||.. |+-.-.++......+..... -|.+.|++++.++ +|+|++=+|+||.=.|.+ +++
T Consensus 86 lL~pdDLlvAPHDCYGGtYRLl~~lA~kG~~~v~fVDQ----~D~~al~~ALa~kdPKLVlIEtPSNPLlRVVD---I~~ 158 (383)
T TIGR02080 86 LLGPDDLLVAPHDCYGGTYRLLNALAKKGQFKVQFVDQ----SDEQALEAALAQKDPKLVLIETPSNPLLRVVD---IAK 158 (383)
T ss_pred EECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEC----CHHHHHHHHHHHCCCCEEEEECCCCCCCHHHH---HHH
T ss_conf 20789768804326770488886452078338998607----62899999997469847998679988521888---999
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC-CCCCCCCC-HHHHHHHHHHHCC
Q ss_conf 112233333201110122110000012233222111233322574146544322344-54442211-0122687531001
Q gi|254780602|r 189 LADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG-LRIGYAAG-ALSLIKSMIVLQG 266 (400)
Q Consensus 189 i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G-~RiG~~v~-~~~li~~l~~~~~ 266 (400)
||+. ++..|..+++|..+ | ..-+...+.+-.+ ++++|.||..+-=. .=.|.+++ ++.+.+.+..-..
T Consensus 159 lc~L-a~~~G~~vvVDNTF--L---sP~lQ~PL~LGAD-----~V~HS~TKYlNGHSDVi~GaVIaKd~q~~e~L~WW~N 227 (383)
T TIGR02080 159 LCKL-AKAVGAVVVVDNTF--L---SPILQQPLSLGAD-----LVIHSTTKYLNGHSDVIAGAVIAKDPQLAEELAWWAN 227 (383)
T ss_pred HHHH-HHHCCEEEEEECCC--C---CHHHCCCCCHHCC-----EEHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 9988-76188389985521--6---7767275301111-----3011111000340343121240147122344333430
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE
Q ss_conf 22233222222222222346764322222211000000024553047760
Q gi|254780602|r 267 QQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR 316 (400)
Q Consensus 267 ~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~ 316 (400)
........+--+..+..|+ ....++ ..-+++.+.+.+.|.+.|-++
T Consensus 228 ~lG~tG~aFDSY~tLRGlR---TL~~Rm-~~~qrnA~~Iv~yL~~~P~V~ 273 (383)
T TIGR02080 228 ALGVTGGAFDSYLTLRGLR---TLAARM-RSQQRNAQTIVEYLQTQPLVK 273 (383)
T ss_pred CCCCCCCHHHHHHHHHHHH---HHHHHH-HHHHHHHHHHHHHHHCCCCEE
T ss_conf 0255444346889986788---888888-888788999999984489402
No 288
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.17 E-value=1.7e-09 Score=77.85 Aligned_cols=330 Identities=13% Similarity=0.021 Sum_probs=181.6
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCC---C---CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6656589749889999999999983887-5699877---8---9899999999864210133332233233454333322
Q gi|254780602|r 34 LCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVA---G---ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 34 i~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~---G---~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
|.|=..|. + +++.|++++...+.+.. =|||.-+ | ..+.-....++.++.||.+ --||=..+|++ |...
T Consensus 54 l~LIASEN-~-~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gce~vD~iE~lai~rak~LF~a~--~aNVQP~SGs~-AN~a 128 (493)
T PRK13580 54 LKLIASEN-Y-SSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDAIEWEAAEHARELFGAE--HAYVQPHSGAD-ANLV 128 (493)
T ss_pred CEEEECCC-C-CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC--CCCCCCCCCHH-HHHH
T ss_conf 66973488-7-889999985673101245889986323775779999999999999983898--50327787607-7899
Q ss_pred CCCCCC-----CCC--------------------------CCCCCCCCCCCCCCC---CCCC--CCCCCCCCCCCCCCCC
Q ss_conf 222223-----322--------------------------322223333232222---2222--2222222222222322
Q gi|254780602|r 107 ALMATV-----NMG--------------------------DEVLIPRPYWVSYPD---MVAL--CGGIPVFVDTQQDDNF 150 (400)
Q Consensus 107 ~~~~~~-----~~G--------------------------d~Vlv~~P~y~~y~~---~~~~--~g~~~~~v~~~~~~~~ 150 (400)
++.+++ +|| |+|+-.+-.-..|.. .... ...+.++++++++.+
T Consensus 129 vy~All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~~~~~~Y~vd~et~- 207 (493)
T PRK13580 129 AFWAILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFRQRSYGVDPDTG- 207 (493)
T ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC-
T ss_conf 9999860002486422334333232330122222024678868705888786633699656342268878753663348-
Q ss_pred CCHHHHHHCCC-CCCCCCEEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCC-CCCCCCCC--CCCCCCCCCC
Q ss_conf 21033310001-22122012113542100001233-33211122333332011101221-10000012--2332221112
Q gi|254780602|r 151 QVSPEKLEQAI-TPKTKWLFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIY-EHIVYRNC--QFSNIVNVEP 225 (400)
Q Consensus 151 ~~d~~~l~~~i-~~~~k~i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y-~~l~~~~~--~~~s~~~~~~ 225 (400)
.+|.|++++.. ..|+|+|+.- ++.|++. +++++.++| ++-+.+++.|-+| +.|+=.+. .+++....
T Consensus 208 ~IDyD~~~~~A~~~kPKlII~G------~SaYpr~idf~~freIA-deVGA~LmaDiAHiaGLVA~g~~~~h~sP~~~-- 278 (493)
T PRK13580 208 LLDYDEIAALAREFKPLVLVAG------YSAYPRRVNFAKLREIA-DEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPH-- 278 (493)
T ss_pred CCCHHHHHHHHHHCCCCEEEEC------CCCCCCCCCHHHHHHHH-HHCCCEEEEEHHHHHHHHHCCCCCCCCCCCCC--
T ss_conf 4089999999997499889977------62465644879999999-97197898105667677642545689995133--
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCCC-CCCCCCCCCCCCCCCCC
Q ss_conf 33322574146544322344544422110122687531001222332222222222-22346-76432222221100000
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAV-EALNG-PQDFVVNNRKIFEYRRD 303 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~-~~l~~-~~~~~~~~~~~~~~~r~ 303 (400)
--|+..|.-|++ .|-|-|.+...+++.+.+.+..-....+ +..-+.|+. .+|.+ ....+.+-.+...+|.+
T Consensus 279 ----ADvVTtTTHKTL--rGPRGGiIl~~~e~~~~Id~avPg~QGG-P~~h~IAakAvaf~EA~~peFk~Y~~qVv~NAk 351 (493)
T PRK13580 279 ----ADIVTTTTHKTL--RGPRGGLVLAKKEYAEAVDKGCPLVLGG-PLPHVMAAKAVALAEARTPDFKKYAHRVVDNAR 351 (493)
T ss_pred ----CCEEECCCCCCC--CCCCCCEEEECHHHHHHHCCCCCCCCCC-HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_conf ----515751234456--7888506884647787651038754687-277699999999999727778999999999999
Q ss_pred CHHHHHHCCCCCEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC-CCCC-----CCEEE
Q ss_conf 0024553047760330274--08998626410233211332248989999999987397998350-2289-----97289
Q gi|254780602|r 304 LCVAQLQGVPGIRYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGS-SFGH-----GPSIR 375 (400)
Q Consensus 304 ~~~~~L~~~~g~~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~-~Fg~-----~~~iR 375 (400)
.+.+.|.+. |+++.. .| +-.+.+|+... ..+. .-++.+|++.||.+.--. .|.. +..||
T Consensus 352 aLA~~L~~~-G~~vvs-GGTdnHlvLvDl~~~----------g~tG-~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIR 418 (493)
T PRK13580 352 ALAEGFLKR-GARLVT-GGTDNHLLLIDVTSF----------GLTG-RQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIR 418 (493)
T ss_pred HHHHHHHHC-CCEEEC-CCCCCCEEEEECCCC----------CCCH-HHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCE
T ss_conf 999999988-994852-888877588856778----------9988-999999987793871688989998898886411
Q ss_pred EEEE------CCHHHHHHHHHHHHHHHHH
Q ss_conf 9962------9999999999999999986
Q gi|254780602|r 376 ISYA------VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 376 is~~------~~~e~l~~al~rl~~~l~~ 398 (400)
|.-. -.++++++..+-|.+.++.
T Consensus 419 iGtpa~TtRGm~e~em~~ia~~I~~~l~~ 447 (493)
T PRK13580 419 LGTPALTTLGMGSDEMDEVAELIVKVLRN 447 (493)
T ss_pred ECCHHHHHCCCCHHHHHHHHHHHHHHHHC
T ss_conf 16666761899989999999999999955
No 289
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.17 E-value=9.3e-10 Score=79.50 Aligned_cols=340 Identities=15% Similarity=0.141 Sum_probs=164.5
Q ss_pred HCCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCC-CCCC
Q ss_conf 8699726656589--7498-899999999999838875699877898999999998642101333322-332334-5433
Q gi|254780602|r 28 SKGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSD-QIIVGT-GAKH 102 (400)
Q Consensus 28 ~~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e-~I~it~-G~~~ 102 (400)
..|+..||+..|- .++. -+|.|.+|+++.++.....++..... +.+..+++.+.+..-.+-.-+ .|++++ .+++
T Consensus 36 ~dG~~ylD~~sg~~~~~lGH~~p~I~~Ai~~ql~~~~~~h~~~~~~-~~~~~l~e~l~~~il~p~~l~~~v~F~~~SGSE 114 (426)
T PRK09264 36 EDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHGLDMHT-EAKREFLETFERLILKPRGLDYKVQFTGPTGTN 114 (426)
T ss_pred CCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHH
T ss_conf 9989999837059853005897999999999998548600134212-899999999999735755798048955898227
Q ss_pred CCCCCCCCCC-CCC-CCCCCCCCCCCCCCCC-CCCCCC------------CCCCCCCCCCCCCC---CHHHHHHCCCCC-
Q ss_conf 3322222223-322-3222233332322222-222222------------22222222223222---103331000122-
Q gi|254780602|r 103 VIFNALMATV-NMG-DEVLIPRPYWVSYPDM-VALCGG------------IPVFVDTQQDDNFQ---VSPEKLEQAITP- 163 (400)
Q Consensus 103 ~l~~~~~~~~-~~G-d~Vlv~~P~y~~y~~~-~~~~g~------------~~~~v~~~~~~~~~---~d~~~l~~~i~~- 163 (400)
|...++...- ..| ..|+...-+|-..... ....|. ...++|.+ ..+. -+.+.+++.+.+
T Consensus 115 AvE~AiKlAR~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~P~~--~~~~~~~~~~~~~e~~l~~~ 192 (426)
T PRK09264 115 AVEAALKLARKVTGRTNIISFTNGFHGMTLGALAVTGNAHKRGGAGVPLNHVTFMPYD--GYFGGDVDTLAYLEKLLEDS 192 (426)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCC--CCCCCCHHHHHHHHHHHHHH
T ss_conf 9999999999834998599983775787414555037843457788997881772788--86678701699999998762
Q ss_pred -----CCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEEC
Q ss_conf -----1220121135-4210000-12333321112233333201110122110000012233-22211123332257414
Q gi|254780602|r 164 -----KTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVVN 235 (400)
Q Consensus 164 -----~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~~ 235 (400)
++.++++ -| +--.|.. .+++-+++|-++| +++|+++|.||+...+.=.|.-+. .-..+.|+ |+
T Consensus 193 ~~g~d~iAAvii-EPiqg~gG~~~~p~~yl~~lr~lc-~~~giLlI~DEV~tGfGRTG~~fa~e~~gv~PD-----iv-- 263 (426)
T PRK09264 193 SSGVDLPAAVIV-ETVQGEGGLNVASAEWLQRLEKLC-RKHDILLIVDDIQAGCGRTGTFFSFEEAGIKPD-----IV-- 263 (426)
T ss_pred CCCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCC-----EE--
T ss_conf 378886169998-786688898249989999999999-870750673320107786778302104799987-----79--
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 6544322344544422110122687531001222332222222222223467---6432222221100000002455304
Q gi|254780602|r 236 GVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGP---QDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 236 S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~---~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++|..+-.|+-+|.+++.+++ +.+..-....+.+.+.+...++.+.|+.- +.+.+ ..+++-+++.+.|+++
T Consensus 264 ~~gKglsGgg~P~sav~~~~e~-d~~~~g~h~~Tf~Gnp~a~aaa~a~L~~~~~~~~l~~----~v~~~g~~l~~~L~~l 338 (426)
T PRK09264 264 TLSKSISGYGLPMALVLIKPEL-DQWKPGEHNGTFRGNNLAFVTATAALETYWSDDAFEK----EVKRKGELVRERLEEI 338 (426)
T ss_pred EECHHHCCCCCCEEEEEECHHH-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHH----HHHHHHHHHHHHHHHH
T ss_conf 8864336897104999973444-0467754466778882999999999999987147999----9999999999999999
Q ss_pred ----CC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHH
Q ss_conf ----77-603302740899862641023321133224898999999998739799835022899728999--62999999
Q gi|254780602|r 313 ----PG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAIL 385 (400)
Q Consensus 313 ----~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l 385 (400)
++ +.-++..| +++=+++.+. ....+++..++ +.||++.+.-. .++.||++ +..+++++
T Consensus 339 ~~~~~~~v~dvRG~G-lm~giel~~~-----------~~~~~i~~~~~-~~Gll~~~~g~--~~~vir~~PPL~it~~ei 403 (426)
T PRK09264 339 AAEYPGLGLSVRGRG-MMQGIDFGDG-----------ELAGKICRRAF-ENGLIIETSGP--NDEVVKLLPPLTIDEEEL 403 (426)
T ss_pred HHHCCCCEEEEEEEE-EEEEEEECCH-----------HHHHHHHHHHH-HCCCEEEECCC--CCCEEEEECCEECCHHHH
T ss_conf 976899627888602-8999993776-----------88999999999-78988964489--998899979920889999
Q ss_pred HHHHHHHHHHHHHC
Q ss_conf 99999999999860
Q gi|254780602|r 386 EEACVRIKRFCHSL 399 (400)
Q Consensus 386 ~~al~rl~~~l~~l 399 (400)
++++++|++.++.+
T Consensus 404 d~~~~~l~~al~~v 417 (426)
T PRK09264 404 EEGLDILEEAVAEV 417 (426)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 290
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=99.09 E-value=4.6e-10 Score=81.37 Aligned_cols=213 Identities=17% Similarity=0.178 Sum_probs=122.8
Q ss_pred HHHHHHCCCCC------CCCCEEECCCCCCCC-CCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-------CCCCCCCCC
Q ss_conf 03331000122------122012113542100-0012333321112233333201110122110-------000012233
Q gi|254780602|r 153 SPEKLEQAITP------KTKWLFLNSPSNPSG-VVYSQNRLRALADVLVRNPHVHIISDDIYEH-------IVYRNCQFS 218 (400)
Q Consensus 153 d~~~l~~~i~~------~~k~i~l~nP~NPTG-~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~-------l~~~~~~~~ 218 (400)
+.+.+++.+.+ .|-||+|=+=+==-| .+-|.+-|++|-++| |+|||++|+||+=.. |.|+.
T Consensus 177 ~~~Yfe~~L~D~sSGvd~PAAvILETVQGEGGiNvAs~eWLq~l~~lC-r~~DILLIVDDIQaGCGRTG~FFSFE~---- 251 (413)
T TIGR02407 177 TIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASKEWLQRLEKLC-RRHDILLIVDDIQAGCGRTGTFFSFEP---- 251 (413)
T ss_pred HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEEEECCCCCCCCCCCCCC----
T ss_conf 289999861788898476725898110375770312355799999999-864986877317418888789645344----
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CC-----CCCC
Q ss_conf 22211123332257414654432234454442211012268753100122233222222222222346-76-----4322
Q gi|254780602|r 219 NIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNG-PQ-----DFVV 292 (400)
Q Consensus 219 s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~-~~-----~~~~ 292 (400)
+++.|| |++ +||+.+-.|+-++-+.-.+++ +...--..+.++--+.+.=.+|.++|+. +. .++.
T Consensus 252 --AgI~PD-----iVc--LSKSisG~GLPlal~L~kPe~-D~W~PGEHNGTFRGNNlAFVtA~aAL~~yW~Dd~f~~~v~ 321 (413)
T TIGR02407 252 --AGIEPD-----IVC--LSKSISGYGLPLALVLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQ 321 (413)
T ss_pred --CCCCCC-----EEE--EECCCCCCCHHHHHHHHCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHH
T ss_conf --677566-----178--502003551268999735456-7467887788646652789999999998489626899999
Q ss_pred CCCCCCCCCCCCHHHHHHCCCC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC
Q ss_conf 2222110000000245530477-603302740899862641023321133224898999999998739799835022899
Q gi|254780602|r 293 NNRKIFEYRRDLCVAQLQGVPG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG 371 (400)
Q Consensus 293 ~~~~~~~~~r~~~~~~L~~~~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~ 371 (400)
+.-+..+++.+.+.+...+. + .+ .+.. ||..=+++.+ ..-..+.+...+++ |+++= .-|++
T Consensus 322 ~~s~~~~~~l~~~~~~~~~~-~~~~-~RGR-Glm~Gl~~~~-----------~~~A~~i~~~aF~~-GLiiE---tsGp~ 383 (413)
T TIGR02407 322 RKSEIIQERLDEIVAEFPEL-IEKS-VRGR-GLMQGLECGD-----------GDLAGKIAKAAFEN-GLIIE---TSGPE 383 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHH-CCCC-CCCC-CEEEECCCCC-----------HHHHHHHHHHHHHC-CCEEE---EECCC
T ss_conf 99999999999999874552-1311-0452-0142000477-----------24689999998646-83898---71889
Q ss_pred CEE-EE--EEECCHHHHHHHHHHHHHHHHH
Q ss_conf 728-99--9629999999999999999986
Q gi|254780602|r 372 PSI-RI--SYAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 372 ~~i-Ri--s~~~~~e~l~~al~rl~~~l~~ 398 (400)
.-| -+ ++++++|+|++||+-|+++++.
T Consensus 384 DeV~K~lPpLTI~~~~L~~GL~IL~~a~~~ 413 (413)
T TIGR02407 384 DEVIKLLPPLTIDEETLQQGLDILEQAVEE 413 (413)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 845870388988878899999999999719
No 291
>PRK13238 tnaA tryptophanase; Provisional
Probab=99.09 E-value=3.2e-10 Score=82.33 Aligned_cols=361 Identities=17% Similarity=0.227 Sum_probs=206.8
Q ss_pred HHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCC--CC-------CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 738975899999999999986997266565897--49-------889999999999983887569987789899999999
Q gi|254780602|r 9 RRVQPSATLVAAQRVRDLRSKGIDVLCLTAGEP--DF-------DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVE 79 (400)
Q Consensus 9 ~~l~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p--~~-------~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~ 79 (400)
+-++|=......++.+.++.+|-+...|-..+. |+ .....-.. ++..|.-.|+.++....|++++.+
T Consensus 14 k~Ve~I~~~treeR~~al~~AgyN~F~L~s~dV~IDlLTDSGT~AMSd~Qwa----amm~gDEsYAGs~sf~~l~~av~d 89 (461)
T PRK13238 14 KMVEPIRLTTREEREEALKEAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWA----AMMRGDEAYAGSRSYYRLEDAVKD 89 (461)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEECCCCCCEEEEEEECCCCCCCCHHHHH----HHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 5786448999999999999828985216646635764215881304599999----998422343135549999999998
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCC--C
Q ss_conf 86421013333223323345433332222222332232222333323222222222222222222222------322--2
Q gi|254780602|r 80 KFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQD------DNF--Q 151 (400)
Q Consensus 80 ~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~------~~~--~ 151 (400)
.+ | -+.+++|.-+..+=..++..++.+|+ |+..+-.|..-+.-+++.|++++.++.++. .-| .
T Consensus 90 i~----G----~~~~iPtHQGRaAE~Ilf~~l~k~g~-~vp~N~HFdTTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN 160 (461)
T PRK13238 90 IF----G----YEYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGGTAVNLVIDEALDTGSRYPFKGN 160 (461)
T ss_pred HC----C----CCEECCCCCCHHHHHHHHHHHCCCCC-EECCCCCCCCCHHHHHHCCCEEEEEECHHHCCCCCCCCCCCC
T ss_conf 72----9----86445456637799999998646997-857887856507888853986773054431495767897887
Q ss_pred CHHHHHHCCCCC----CCCCEEECCCCCC-CCCCCCCCCCCCCCCCCCCCCCCEEECCCCC-CC---CCC---CCCCCCC
Q ss_conf 103331000122----1220121135421-0000123333211122333332011101221-10---000---0122332
Q gi|254780602|r 152 VSPEKLEQAITP----KTKWLFLNSPSNP-SGVVYSQNRLRALADVLVRNPHVHIISDDIY-EH---IVY---RNCQFSN 219 (400)
Q Consensus 152 ~d~~~l~~~i~~----~~k~i~l~nP~NP-TG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y-~~---l~~---~~~~~~s 219 (400)
+|++.|++.|.+ +...|+++--||- .|+=.|-+.++++.++| +++++.++.|.+= .+ |+- .+..-.|
T Consensus 161 ~Dl~kLe~~i~~~g~~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la-~~~~ip~~lDaaRfaENAyFIk~RE~gY~d~s 239 (461)
T PRK13238 161 FDLEKLEALIEEVGADNIPFIVMTITNNSAGGQPVSMANLRAVYEIA-KKYGIPVVLDAARFAENAYFIKQREPGYKDKS 239 (461)
T ss_pred CCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH-HHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 79999999998738446548999986268788164689999999999-98299599865667664578873253125799
Q ss_pred CCCCCCCCCC--EEEEECCCCCCCCCCCCCCC-CCCCHH--HHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCCCC--
Q ss_conf 2211123332--25741465443223445444-221101--226875310012-----22332222222222223467--
Q gi|254780602|r 220 IVNVEPSLYE--RTLVVNGVSKAYAMTGLRIG-YAAGAL--SLIKSMIVLQGQ-----QTSGACSIAQWAAVEALNGP-- 287 (400)
Q Consensus 220 ~~~~~~~~~~--~~i~~~S~SK~~~~~G~RiG-~~v~~~--~li~~l~~~~~~-----~~~~~~~~~q~a~~~~l~~~-- 287 (400)
+..+..++.+ ..+++ |.-|.- +. ++| ++.... ++.+++....-. +..+++.--..+++..|.+.
T Consensus 240 i~eI~rEmfs~aDg~tm-SaKKD~-~v--niGG~l~~~d~~~l~~~~~~~~i~~EGf~TYGGlaGRDmeAlAvGL~E~~d 315 (461)
T PRK13238 240 IKEITREMFSYADGLTM-SAKKDA-MV--NIGGLLCFKDDSDLYTKCRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMD 315 (461)
T ss_pred HHHHHHHHHHHHHEEEE-EECCCC-EE--CCCCEEEECCHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHCCHHHHCC
T ss_conf 99999999845237999-833012-10--442289966759999998744242058756688338779999735787607
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC-CC
Q ss_conf 64322222211000000024553047760330274089986264102332113322489899999999873979983-50
Q gi|254780602|r 288 QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ-GS 366 (400)
Q Consensus 288 ~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~ 366 (400)
++|+.... ..-+++.+.|.+. |+.+..|-||--+++|...+... .+. .......++..|..+.||-.+- |+
T Consensus 316 ~dyl~~Ri----~qv~yLg~~L~~~-GVPvv~P~GGHAv~iDA~~fLPh-ip~--~qfPa~aLa~eLY~~~GIR~vEiGs 387 (461)
T PRK13238 316 EDYLAYRI----AQVEYLGEGLEEA-GVPVVTPAGGHAVFVDAGKFLPH-IPA--EQFPAQALACELYLEAGIRAVEIGS 387 (461)
T ss_pred HHHHHHHH----HHHHHHHHHHHHC-CCCEECCCCCEEEEEEHHHHCCC-CCH--HHCCHHHHHHHHHHHCCCCEEEECC
T ss_conf 79999779----9999999999977-99705679851899746785679-981--4481899999999972955787500
Q ss_pred -CCCCC-----------CEEEEEEEC---CH---HHHHHHHHHHHHH
Q ss_conf -22899-----------728999629---99---9999999999999
Q gi|254780602|r 367 -SFGHG-----------PSIRISYAV---SD---AILEEACVRIKRF 395 (400)
Q Consensus 367 -~Fg~~-----------~~iRis~~~---~~---e~l~~al~rl~~~ 395 (400)
.||.+ .-+|+++-. +. +-+.+++..+.+=
T Consensus 388 ~~~grdp~tg~~~~~~~ELvRLAiPRRvYT~sH~dyva~~l~~l~~~ 434 (461)
T PRK13238 388 LLLGRDPDTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKWVKEN 434 (461)
T ss_pred HHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 12054888766578760000242450003588999999999999956
No 292
>PRK06149 hypothetical protein; Provisional
Probab=99.06 E-value=2.5e-09 Score=76.83 Aligned_cols=326 Identities=12% Similarity=0.084 Sum_probs=166.4
Q ss_pred CHHHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC-CCCCCC
Q ss_conf 99999999999838--87569987789899999999864210133332233233454333322222223-322-322223
Q gi|254780602|r 46 PENVKYAVVRAMER--GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV-NMG-DEVLIP 121 (400)
Q Consensus 46 p~~i~~a~~~al~~--~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~-~~G-d~Vlv~ 121 (400)
.|.|.+|+.+.+.. ..+.|.... ..+ +|+++.... +-.-+.|+++|++++|...+++..- ..| ..||..
T Consensus 601 hP~v~~A~~~Q~~~L~~~s~~~~~~-~~e----lAerL~~~~--P~~l~~vfF~nSGsEAnE~AlKlAr~~tGr~~iI~~ 673 (972)
T PRK06149 601 HPRMAAAAARQWSLLNTNSRFHYAA-VAE----FSERLAALA--PDGLDTVFLVNSGSEANDLAIRLAWAASGGRDVLSV 673 (972)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCHH-HHH----HHHHHHHHC--CCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
T ss_conf 9999999999999745176636515-999----999999857--656266985077499999999999996289977999
Q ss_pred CCCCCCCCCCC-CCC----------CCCC-----CCCCCCCCCC---------CCCHHHH-HHCCCC--CCCCCEEECCC
Q ss_conf 33323222222-222----------2222-----2222222232---------2210333-100012--21220121135
Q gi|254780602|r 122 RPYWVSYPDMV-ALC----------GGIP-----VFVDTQQDDN---------FQVSPEK-LEQAIT--PKTKWLFLNSP 173 (400)
Q Consensus 122 ~P~y~~y~~~~-~~~----------g~~~-----~~v~~~~~~~---------~~~d~~~-l~~~i~--~~~k~i~l~nP 173 (400)
.-+|-.-...+ ... +..+ ++.|-...+. |.-+.+. +++... +++-++++ -|
T Consensus 674 ~~ayHG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~-EP 752 (972)
T PRK06149 674 LEAYHGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTFRGKFRGADSAADYLRDVVAQLEDLDARGRQLAGFIC-EP 752 (972)
T ss_pred ECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE-EC
T ss_conf 68708826788986334345766767899843660687445677788640789999999999999715896689999-57
Q ss_pred --CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCC-CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf --4210000123333211122333332011101221100000122332221112-3332257414654432234454442
Q gi|254780602|r 174 --SNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEP-SLYERTLVVNGVSKAYAMTGLRIGY 250 (400)
Q Consensus 174 --~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~-~~~~~~i~~~S~SK~~~~~G~RiG~ 250 (400)
.+=-+.+.++.-++++.++| +++|+++|.||+-..+.=.|.- +++... +.... |+ +++|..+ .|+-+|.
T Consensus 753 I~G~gG~i~~P~gyl~~v~~~c-~~~g~LlI~DEVQtG~GRtG~~---Fwa~e~~gv~PD-Iv--t~aKglg-~G~PlgA 824 (972)
T PRK06149 753 VYGNAGGISLPDGYLRQVYAAV-RARGGVCIADEVQVGYGRLGHY---FWGFEQQGVVPD-II--TMAKGMG-NGHPLGA 824 (972)
T ss_pred CCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCC---CCHHHHCCCCCC-EE--EECCCCC-CCCCCEE
T ss_conf 6477787379879999999999-9749789961322177857663---004454299987-79--8645555-8866478
Q ss_pred CCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECCCC
Q ss_conf 2110122687531001-222332222222222223467--6432222221100000002455304----77603302740
Q gi|254780602|r 251 AAGALSLIKSMIVLQG-QQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPDGA 323 (400)
Q Consensus 251 ~v~~~~li~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~g~ 323 (400)
+++.+++.+.+..-.. ..+++-+.++..++.+.|+-- +..++. -++.-+++.+.|+++ |-+.=++.. |
T Consensus 825 vv~~~eia~~f~~~g~~~sTfgGnPlacAaalavL~vi~~e~L~~n----a~~~G~~l~~~L~~L~~~~p~IgdVRG~-G 899 (972)
T PRK06149 825 VITRREIAEALEAEGYFFSSTGGSPVSCAIGMAVLDVMREEKLQEN----ARRVGDHLKARLEALVDRHPLAGAVHGM-G 899 (972)
T ss_pred EEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHH----HHHHHHHHHHHHHHHHHHCCCEEEEECC-C
T ss_conf 8974999976526886005899898999999999999987369999----9999999999999998619948986226-7
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 899862641023321133224898999999998739799835022899728999--629999999999999999986
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
+|+=+++-.-.....+..+ ....++.++ .+.||++.+.-.+ .+-+||. ++.+.+++++.++.|.+.|..
T Consensus 900 Lm~GiElV~d~~t~~Pa~~---~~~~i~~~~-~e~Gil~~~~G~~--~nVlki~PPL~i~~e~~D~~l~~l~~vL~E 970 (972)
T PRK06149 900 LYLGVELVRDRQTLEPATE---ETAAICDRL-LELGVIMQPTGDH--LNILKIKPPLCTDRESADFFVDMLDRVLTE 970 (972)
T ss_pred CEEEEEEECCCCCCCCCHH---HHHHHHHHH-HHCCEEEECCCCC--CCEEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 2899997016676898889---999999999-9789589427898--887998089467699999999999999855
No 293
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=99.01 E-value=2e-10 Score=83.54 Aligned_cols=198 Identities=20% Similarity=0.237 Sum_probs=124.2
Q ss_pred HHHHHHHHHH-HH----CCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999999-83----88756998-778989999999986421013333223323345433332222222332232222
Q gi|254780602|r 47 ENVKYAVVRA-ME----RGETKYTA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLI 120 (400)
Q Consensus 47 ~~i~~a~~~a-l~----~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv 120 (400)
..|++|++++ +. .+.+||+. ..|-..|-+..|+ -+|.+-.-=+.-+.+| +++|..++..+++|||+.+.
T Consensus 28 ~KVL~Af~~~~vs~~hf~~sTGYGy~D~GRd~Le~vyA~----vfgaE~ALVR~q~vSG-THAi~~aLfg~LrPGD~ll~ 102 (405)
T pfam06838 28 LKVLNAFQEHRVSDSHFTGSTGYGYDDIGRDTLERVYAR----VFGAEAALVRPQFVSG-THAIATALFGVLRPGDELLY 102 (405)
T ss_pred HHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHH----HHCCHHHHCCCCCCCH-HHHHHHHHHHCCCCCCEEEE
T ss_conf 999999998097776668888778776468999999999----9673776503432552-89999999836789987874
Q ss_pred CC-CCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCC----CCCCCC
Q ss_conf 33-332322222----------222222222222222232221033310001221220121135421000----012333
Q gi|254780602|r 121 PR-PYWVSYPDM----------VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGV----VYSQNR 185 (400)
Q Consensus 121 ~~-P~y~~y~~~----------~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~----v~s~~~ 185 (400)
.+ .=|...... .+-.|..-..+|+.+++ .+|.+.++++++++||++.+- --+|. .++.++
T Consensus 103 itG~PYDTL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g--~~D~~~i~~ai~~~tk~v~IQ---RS~GYs~R~slsi~~ 177 (405)
T pfam06838 103 ITGKPYDTLEEVIGIRGEGQGSLKDFGIGYREVPLLENG--KVDWQAVKTAITPNTKLIGIQ---RSKGYAWRPSLTIAE 177 (405)
T ss_pred CCCCCCHHHHHHHCCCCCCCCCHHHHCCCCEEECCCCCC--CCCHHHHHHHCCCCCEEEEEE---CCCCCCCCCCCCHHH
T ss_conf 489973658987185889988889959660364357789--849999997617564599996---256866688879999
Q ss_pred CCCCCCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC--CCCCCCCHHHHHHHHH
Q ss_conf 321112233-3332011101221100000122332221112333225741465443223445--4442211012268753
Q gi|254780602|r 186 LRALADVLV-RNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL--RIGYAAGALSLIKSMI 262 (400)
Q Consensus 186 l~~i~~~~a-~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~--RiG~~v~~~~li~~l~ 262 (400)
++++++... .+.|+++++|.+|.+|+- ..+++.. .. -++.+|+=|+-+ .|+ --||+++.+++++...
T Consensus 178 I~~~i~~vk~~~pd~ivfVDNCYGEFvE-~~EP~~v-GA-------DliaGSLIKNpG-GgiaptGGYIaGk~dlVe~aa 247 (405)
T pfam06838 178 IKEMIKFVKEINPNVIVFVDNCYGEFVE-TKEPTHV-GA-------DLIAGSLIKNPG-GGIAKTGGYIAGKEELVEQAS 247 (405)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCCC-CH-------HHEECCCEECCC-CCCCCCCCEEECHHHHHHHHH
T ss_conf 9999999997689939999788602026-7585301-63-------440120124799-773675777853699999987
Q ss_pred HH
Q ss_conf 10
Q gi|254780602|r 263 VL 264 (400)
Q Consensus 263 ~~ 264 (400)
..
T Consensus 248 ~R 249 (405)
T pfam06838 248 YR 249 (405)
T ss_pred HH
T ss_conf 52
No 294
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.01 E-value=2.1e-10 Score=83.41 Aligned_cols=149 Identities=17% Similarity=0.287 Sum_probs=98.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCHHHHHHCCCCC--CC-
Q ss_conf 3323345433332222222332232222333323222222222222222222222322----2103331000122--12-
Q gi|254780602|r 93 QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNF----QVSPEKLEQAITP--KT- 165 (400)
Q Consensus 93 ~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~----~~d~~~l~~~i~~--~~- 165 (400)
.-+++||++.++..++++++.|||.||++..+--...+.+.++|+.|+++....+..| .++.+.+++.+-+ ..
T Consensus 88 tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~al~~~~~~~ 167 (557)
T COG1982 88 TYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE 167 (557)
T ss_pred EEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCHHHH
T ss_conf 29997782289999998603899989965876378888998748832784177785446537869899879998471304
Q ss_pred CCEEECCCCCCC--CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 201211354210--000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 166 KWLFLNSPSNPS--GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 166 k~i~l~nP~NPT--G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
|+++++ ||| |.+++.+. |++++ .+.++|++.||++.- .++-....+-.+. . ....+++.|.-|..
T Consensus 168 k~~vit---npTYdGv~~n~~~---i~~~~-~~~~a~v~~deah~~-~~~~~~~l~~~~~--~-~~~~~~tqS~HK~l-- 234 (557)
T COG1982 168 KLAVIT---NPTYDGVCYNLRK---IVELL-HHYGAWVLYDEAHPA-HFDFSPMLPESAL--N-GGADFVTQSTHKLL-- 234 (557)
T ss_pred HEEEEE---CCCCCEEEECHHH---HHHHH-HHCCCEEEHHHCCCC-CCCCCCCCCCHHH--H-CCCEEEEEEHHHHH--
T ss_conf 068896---4853247605999---99997-531866888645774-3355555741145--4-57438981054421--
Q ss_pred CCCCCC-CCCCH
Q ss_conf 445444-22110
Q gi|254780602|r 244 TGLRIG-YAAGA 254 (400)
Q Consensus 244 ~G~RiG-~~v~~ 254 (400)
+++.-+ ++...
T Consensus 235 ~alSQaS~iHv~ 246 (557)
T COG1982 235 AALSQASMIHVK 246 (557)
T ss_pred HHHHHHHHHHHC
T ss_conf 234366787508
No 295
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.01 E-value=2.3e-09 Score=77.11 Aligned_cols=335 Identities=16% Similarity=0.190 Sum_probs=182.0
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCC--CCCCCCCC------CHHHHH---HHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9726656589749889999999999983887--56998778------989999---999986421013333223323345
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGE--TKYTAVAG------ISPLRE---AIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~~~G------~~~lR~---aia~~~~~~~g~~~~~e~I~it~G 99 (400)
++.||+.-=+-.--.+++.++|+.+- .+|. -.|+. .| -|+.++ .+++++ |+ |.+-+|+|
T Consensus 15 r~~iNv~PiQrGGiLt~eArkal~E~-gDGYSvCD~C~-~Grldei~kPpI~~F~~dlaeFl----g~----D~~R~t~G 84 (382)
T COG1103 15 RGFINVNPIQRGGILTEEARKALLEW-GDGYSVCDFCL-EGRLDEITKPPIKDFLEDLAEFL----GM----DEVRVTAG 84 (382)
T ss_pred CCCCCCCHHHCCCCCCHHHHHHHHHH-CCCCCHHHHHC-CCCCCCCCCCCHHHHHHHHHHHH----CC----CEEEECCC
T ss_conf 17603472340686879999999986-48863443104-57411025885888999889871----98----63442365
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC----C--C-CCCEEEC
Q ss_conf 4333322222223322322223333-23222222222222222222222322210333100012----2--1-2201211
Q gi|254780602|r 100 AKHVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT----P--K-TKWLFLN 171 (400)
Q Consensus 100 ~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~----~--~-~k~i~l~ 171 (400)
+.++=+.++.++|.+||-|++-.-. |..|. +++.+|.++..||-..--.|.+++|...+.|. + + +.+.+|+
T Consensus 85 ARe~KfavMhal~~~gd~vV~D~~aHYttyv-AAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallT 163 (382)
T COG1103 85 AREAKFAVMHALCKEGDWVVVDSLAHYTTYV-AAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLT 163 (382)
T ss_pred CHHHHHHHHHHHCCCCCEEEECCCCHHHHHH-HHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 1256799999751589889974742278899-998639758966789998457668888999999986248984489996
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 35421000012333321112233333201110122110000012233222111233322574146544322344544422
Q gi|254780602|r 172 SPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYA 251 (400)
Q Consensus 172 nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 251 (400)
+|.---|. ..+-++++++| +++++.++..-+|.- |.-+.|..... .-+++.|-.|+++.+| -+|.+
T Consensus 164 h~Dg~YGN---l~Dakkva~ic-~e~gvPlllN~AYt~----Grmpvs~ke~g-----~DFiVgSGHKsmAAs~-PiGvl 229 (382)
T COG1103 164 HVDGEYGN---LADAKKVAKIC-REYGVPLLLNCAYTV----GRMPVSGKEIG-----ADFIVGSGHKSMAASA-PIGVL 229 (382)
T ss_pred CCCCCCCC---CHHHHHHHHHH-HHCCCCEEEECCEEE----CCCCCCCCCCC-----CCEEEECCCCCHHCCC-CEEEE
T ss_conf 35777577---22167899999-872995685121022----32113665567-----8779724853001148-70477
Q ss_pred CCHHHHHHHHHHHCCC-------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCHHHHHHCCCCCEE--EE
Q ss_conf 1101226875310012-------22332222222222223467643222222110---000000245530477603--30
Q gi|254780602|r 252 AGALSLIKSMIVLQGQ-------QTSGACSIAQWAAVEALNGPQDFVVNNRKIFE---YRRDLCVAQLQGVPGIRY--MI 319 (400)
Q Consensus 252 v~~~~li~~l~~~~~~-------~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~L~~~~g~~~--~~ 319 (400)
....+..+...+.... -..+++.-. .-.+..+ ..-.++.+....+. ++.+++.+.|+++.|+.- .+
T Consensus 230 ~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rG-apivTlm-ASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~r 307 (382)
T COG1103 230 AMSEEWAEIVLRRSGRAFPKKEVELLGCTVRG-APIVTLM-ASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGER 307 (382)
T ss_pred EEHHHHHHHHHHHCCCCCCCCEEEEECCCCCC-CHHHHHH-HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 51367778998631544653325661432468-4389987-407799999987889999999999999974308871779
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEE-EECCCCCCCCCEEEEE-EECCHHHHHHHHHHHHHHHH
Q ss_conf 274089986264102332113322489899999999873979-9835022899728999-62999999999999999998
Q gi|254780602|r 320 PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVA-VVQGSSFGHGPSIRIS-YAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 320 p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~-v~pG~~Fg~~~~iRis-~~~~~e~l~~al~rl~~~l~ 397 (400)
|.--=.++...+.+.. ...+..+...-+.+. |++.||. +.|| ...+|.+| |+.+.|+++--++.+++.++
T Consensus 308 Pk~HdLm~Fetp~f~e---Iakk~~r~gyFlY~E-LK~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~afkeI~e 379 (382)
T COG1103 308 PKNHDLMKFETPVFHE---IAKKHKRKGYFLYEE-LKKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAFKEIAE 379 (382)
T ss_pred CCCCCEEEECCCHHHH---HHHHCCCCCEEEHHH-HHHCCCCCCCCC----CEEEEEEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 7656425533712899---987576785466898-876586650667----51378887505779999999999999998
Q ss_pred HCC
Q ss_conf 609
Q gi|254780602|r 398 SLQ 400 (400)
Q Consensus 398 ~l~ 400 (400)
+++
T Consensus 380 ky~ 382 (382)
T COG1103 380 KYG 382 (382)
T ss_pred HCC
T ss_conf 619
No 296
>PRK06148 hypothetical protein; Provisional
Probab=98.99 E-value=1.3e-08 Score=72.43 Aligned_cols=328 Identities=13% Similarity=0.066 Sum_probs=166.9
Q ss_pred CCHHHHHHHHHHHHC--CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC-CCCCC
Q ss_conf 899999999999838--87569987789899999999864210133332233233454333322222223-322-32222
Q gi|254780602|r 45 MPENVKYAVVRAMER--GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV-NMG-DEVLI 120 (400)
Q Consensus 45 ~p~~i~~a~~~al~~--~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~-~~G-d~Vlv 120 (400)
..|.|.+|+.+.++. ..+.|.. +. ..++|+++..... -.-+.|+++|++++|...+++.-- ..| ..||.
T Consensus 641 ~hP~v~~ai~~Q~~~L~t~t~y~~----~~-~~~lAerL~~~~P--~~l~~vfF~NSGSEAnE~AiKlAr~~tgr~~iI~ 713 (1015)
T PRK06148 641 AHPRVVEAAARQAARLNTNTRYLH----DA-IVAYAERLTATLP--EGLTVASFVNSGSEANSLALRLARAHTGARDAIV 713 (1015)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCC----CH-HHHHHHHHHHHCC--CCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 798999999999976242666568----36-9999999998477--7765576307738899999999998608997488
Q ss_pred CCCCCCCCCCC-CCCCC--------------CCCCCCCCCCCCCCCC-H-------HHHHHCCC---C---CCCCCEEEC
Q ss_conf 33332322222-22222--------------2222222222232221-0-------33310001---2---212201211
Q gi|254780602|r 121 PRPYWVSYPDM-VALCG--------------GIPVFVDTQQDDNFQV-S-------PEKLEQAI---T---PKTKWLFLN 171 (400)
Q Consensus 121 ~~P~y~~y~~~-~~~~g--------------~~~~~v~~~~~~~~~~-d-------~~~l~~~i---~---~~~k~i~l~ 171 (400)
..-+|-.-... ....| .....+|-..-+.|.. + .+++++.+ . +++-++++
T Consensus 714 ~~~aYHG~T~gals~s~~~~~~~~g~~~~~~v~~~~~P~~yr~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~Aa~I~- 792 (1015)
T PRK06148 714 LDWAYHGTTQELIDLSPYKFKRKGGKGRPDHVEEAEVPDSYRAPERWPDAEHGRRFAESVAEQIAAMRAQGRAPAFFIA- 792 (1015)
T ss_pred EECCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-
T ss_conf 6035568636677636774556778899985377889976567778981678999999999999998715881589997-
Q ss_pred CC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC--CCCCCCCCCEEEEECCCCCCCCCCCCC
Q ss_conf 35-4210000-1233332111223333320111012211000001223322--211123332257414654432234454
Q gi|254780602|r 172 SP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNI--VNVEPSLYERTLVVNGVSKAYAMTGLR 247 (400)
Q Consensus 172 nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~--~~~~~~~~~~~i~~~S~SK~~~~~G~R 247 (400)
-| ..-.|.+ .++.-++++.++| +++|+++|.||+...|.=.|..+-.+ ..+.|+ |+ +++|..+ .|+-
T Consensus 793 EpIqg~gG~~~~p~gyl~~v~~~c-~~~G~LlI~DEVQtGfGRTG~~~fa~e~~gV~PD-----Iv--t~aKglg-~G~P 863 (1015)
T PRK06148 793 ESIPSVAGQVFLPEGYLREVYAMV-RAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPD-----IV--TMGKPIG-NGHP 863 (1015)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEECCCCCCCCCCCCCCEEHHCCCCCC-----EE--EECCCCC-CCCC
T ss_conf 883378884079889999999999-9839789995453387823663000031299888-----79--8656444-7867
Q ss_pred CCCCCCHHHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC----CCCEEEECCC
Q ss_conf 4422110122687531001-2223322222222222234676432222221100000002455304----7760330274
Q gi|254780602|r 248 IGYAAGALSLIKSMIVLQG-QQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV----PGIRYMIPDG 322 (400)
Q Consensus 248 iG~~v~~~~li~~l~~~~~-~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~g~~~~~p~g 322 (400)
+|.+++.+++.+.+..-.. ..+++-+.++..++.+.|+--++ ++..+.-++.-+++.+.|+++ +-+.=++..
T Consensus 864 lgAv~~~~ei~~~f~~g~~~~sTfgGnPlacAaalavLdii~~--e~L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~- 940 (1015)
T PRK06148 864 MSAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIED--EDLRRNALEIGNYLLAGFRSLQQRFDIIGDVRGL- 940 (1015)
T ss_pred CEEEEECHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC-
T ss_conf 6788985999975426875268878699999999999999987--3799999999999999999988608968876127-
Q ss_pred CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHH
Q ss_conf 0899862641023321133224898999999998739799835022899728999--629999999999999999986
Q gi|254780602|r 323 AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 323 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~ 398 (400)
|+++=+++-.-.....+.. .-...++.+ +.++||++.+... .++-+||. ++.+.++++..++.|.+.|.+
T Consensus 941 GLm~GiElV~d~~tk~Pa~---~~~~~v~~~-~~e~GvLi~~~G~--~~nVlri~PPL~it~e~~D~~l~~Ld~vl~a 1012 (1015)
T PRK06148 941 GLFLGIELVTDRKTKAPAT---AIARKVKDG-ARERGILIGTEGP--KDNVLKMRPPMIFSRADADHLLEVLDDSFAA 1012 (1015)
T ss_pred CCEEEEEECCCCCCCCCCH---HHHHHHHHH-HHHCCEEEECCCC--CCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 7089999635877789639---999999999-9978918932789--9887998089645599999999999999999
No 297
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.98 E-value=1.8e-09 Score=77.71 Aligned_cols=331 Identities=14% Similarity=0.128 Sum_probs=147.6
Q ss_pred CCCCEEECCCCCC----CCCCCHHHHHHHHHHHHCCC--CCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897----49889999999999983887--569987789-8999999998642101333322332334543
Q gi|254780602|r 29 KGIDVLCLTAGEP----DFDMPENVKYAVVRAMERGE--TKYTAVAGI-SPLREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 29 ~g~~ii~l~~G~p----~~~~p~~i~~a~~~al~~~~--~~Y~~~~G~-~~lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
.|+..+|+..|.- .+. +|.|.+++....+... ..++..... ......+++.+.+..+ +-.-+.+.++++++
T Consensus 36 dG~~yLD~~~g~~~~~lGh~-hp~iv~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~l~~v~f~~sGs 113 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALGMN-HPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLG-DPALPHLFFIEGGA 113 (431)
T ss_pred CCCEEEECCHHHHHHHHCCC-CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC-CCCCCEEEEECCHH
T ss_conf 99884170141998877079-79999999999999887653856622556999999999998508-87778589758679
Q ss_pred CCCCCCCCCC----CC----------CCCCCCCCCCCCCCCCC-CCCCCCCCCC------------------CCCCCCCC
Q ss_conf 3332222222----33----------22322223333232222-2222222222------------------22222223
Q gi|254780602|r 102 HVIFNALMAT----VN----------MGDEVLIPRPYWVSYPD-MVALCGGIPV------------------FVDTQQDD 148 (400)
Q Consensus 102 ~~l~~~~~~~----~~----------~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~------------------~v~~~~~~ 148 (400)
+|...++... .. .|.+|+...-+|-.-.. .....|..+. ..+.+..+
T Consensus 114 EAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~gals~t~~~~~~~~~~p~~~~~~~~~p~~~~~~~~~~ 193 (431)
T TIGR03251 114 LAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN 193 (431)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99999999999997643123455777764799972536599633334436875335778877877777988768888765
Q ss_pred C----C--CCHHHHHHCCCCC---CCCCEEECCC-CCCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 2----2--2103331000122---1220121135-421000-01233332111223333320111012211000001223
Q gi|254780602|r 149 N----F--QVSPEKLEQAITP---KTKWLFLNSP-SNPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQF 217 (400)
Q Consensus 149 ~----~--~~d~~~l~~~i~~---~~k~i~l~nP-~NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~ 217 (400)
. + .-+++.++..+.+ ++-++++ -| +--.|. +.+++-++++-++| ++||+++|.||+...|.=.|.-+
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~iAAvI~-EPIqG~gG~~~~p~~yl~~lr~lc-~~~giLLI~DEVqtGfGRtG~~f 271 (431)
T TIGR03251 194 LDQVIALEEEALRQARAAFAERPHDIACFIA-EPIQGEGGDNHFRPEFLRAMRALC-DEHDALLIFDEVQTGVGLTGTAW 271 (431)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-CCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCEECCCCCCCCH
T ss_conf 0025556899999999999738995799996-777677798568989999999998-76275055341013677667744
Q ss_pred CC-CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH---HHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32-22111233322574146544322344544422110122---6875310--012223322222222222234676432
Q gi|254780602|r 218 SN-IVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL---IKSMIVL--QGQQTSGACSIAQWAAVEALNGPQDFV 291 (400)
Q Consensus 218 ~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l---i~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~ 291 (400)
.+ -..+.|+ |+ +++|..+. |.+.+...+ ....... ....+.+.+.+...++.+.|+--++
T Consensus 272 a~e~~gv~PD-----iv--~~gKgl~~-----g~~~~~~~~~~~~~~~~~~~~~~~sT~~gnpla~aaala~l~ii~~-- 337 (431)
T TIGR03251 272 AYQQLGVQPD-----IV--AFGKKTQV-----CGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEE-- 337 (431)
T ss_pred HHHHCCCCCC-----EE--EECCCCCC-----CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--
T ss_conf 6775078899-----89--87772235-----5188899999999986417877678888898999999988999862--
Q ss_pred CCCCCCCCCCCCCHHHHHHCC----CC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC
Q ss_conf 222221100000002455304----77-6033027408998626410233211332248989999999987397998350
Q gi|254780602|r 292 VNNRKIFEYRRDLCVAQLQGV----PG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGS 366 (400)
Q Consensus 292 ~~~~~~~~~~r~~~~~~L~~~----~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~ 366 (400)
+...+..+++-+++.+.|+++ |. +.=++.. |+++=+++++. ....+++.+++ +.|+++.|..
T Consensus 338 e~l~~~v~~~g~~l~~~L~~l~~~~p~~V~dVRG~-GLm~giel~~~-----------~~~~~~~~~~~-~~Gll~~~~g 404 (431)
T TIGR03251 338 ERLVDNARVQGAHLLARLHELAAEFPHLVSNPRGR-GLMCAFDLPST-----------ADRDEVIRQLY-REGVLLLGCG 404 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEC-CEEEEEECCCH-----------HHHHHHHHHHH-HCCCEEEECC
T ss_conf 46999999999999999999987687824563013-36999981881-----------67999999999-7893997479
Q ss_pred CCCCCCEEEEE--EECCHHHHHHHHHHHHH
Q ss_conf 22899728999--62999999999999999
Q gi|254780602|r 367 SFGHGPSIRIS--YAVSDAILEEACVRIKR 394 (400)
Q Consensus 367 ~Fg~~~~iRis--~~~~~e~l~~al~rl~~ 394 (400)
++.||+. +..+++++++++++|++
T Consensus 405 ----~~~ir~~PPL~it~~eid~~~~~l~~ 430 (431)
T TIGR03251 405 ----ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf ----99899988930889999999999726
No 298
>PRK02769 histidine decarboxylase; Provisional
Probab=98.98 E-value=1.5e-09 Score=78.22 Aligned_cols=285 Identities=11% Similarity=0.115 Sum_probs=160.5
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9899999999864210133332233233454333322222223--32232222333323222222222222222222222
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV--NMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQD 147 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~--~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~ 147 (400)
..++-.+|.+|+.+.++.+.+.-.=.+|+|++++...++.+-= -|...+.+++-+-.....++.++|...+.+|+++.
T Consensus 63 s~~~E~eVl~~~a~L~~~~~~~~wGyvTsGGTE~Nl~al~~ARe~~p~~vl~~Se~aHYSi~Kaa~llgi~~~~V~~~~~ 142 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN 142 (380)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEECCCCC
T ss_conf 08999999999999858995458779906554999999999998679968996673227799999983998707367999
Q ss_pred CCCCCHHHHHHCCCCCC---CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC---EEECCCCCCCCCCCCCCCCCCC
Q ss_conf 32221033310001221---22012113542100001233332111223333320---1110122110000012233222
Q gi|254780602|r 148 DNFQVSPEKLEQAITPK---TKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHV---HIISDDIYEHIVYRNCQFSNIV 221 (400)
Q Consensus 148 ~~~~~d~~~l~~~i~~~---~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i---~ii~De~Y~~l~~~~~~~~s~~ 221 (400)
+ .+|+++|++++... +-+|+.+-....+|.+ +.+.+|.++|.+ +++ |+-+|.+++.+...-.++.+..
T Consensus 143 G--~md~~~L~~~i~~~~~~P~iv~at~GTT~~Gai---D~i~~i~~i~~~-~g~~~~wlHvDaA~gG~~lpf~~~~~~~ 216 (380)
T PRK02769 143 G--EIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKK-IGIDDYYIHADAALSGMILPFVNNPPPF 216 (380)
T ss_pred C--CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHH-CCCCCEEEEEECCCCCEEEECCCCCCCC
T ss_conf 9--497999999999679987799996479888671---899999999998-2998427984120233243326775457
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC-----CC-----CCCCCCCCCCCCCCCCC
Q ss_conf 111233322574146544322344544422110122687531001222332-----22-----22222222234676432
Q gi|254780602|r 222 NVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGA-----CS-----IAQWAAVEALNGPQDFV 291 (400)
Q Consensus 222 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~-----~~-----~~q~a~~~~l~~~~~~~ 291 (400)
...+. -..|++ +..|..++| +-+|.++..++.++.+..-..+....- +. ...+++...+ +.+-+
T Consensus 217 ~~~~~--~dSis~-d~HK~~~~p-~~~gv~l~r~~~~~~~~~~~~Yi~s~d~TI~GSR~G~~~~~~W~~l~~l--G~~Gy 290 (380)
T PRK02769 217 SFADG--IDSIAI-SGHKFIGSP-MPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSL--GSKGL 290 (380)
T ss_pred CCCCC--CCEEEE-CCCCCCCCC-CCEEEEEEEHHHHHHCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHH--CHHHH
T ss_conf 89888--897998-773457887-7559999872565411436870378982244257667899999999987--89889
Q ss_pred CCCCCCCCCCCCCHHHHHHCCCCCEE-EECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC
Q ss_conf 22222110000000245530477603-30274089986264102332113322489899999999873979983502289
Q gi|254780602|r 292 VNNRKIFEYRRDLCVAQLQGVPGIRY-MIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH 370 (400)
Q Consensus 292 ~~~~~~~~~~r~~~~~~L~~~~g~~~-~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~ 370 (400)
++..+...++.+++.+.|++. |+.+ ..|...--+|. .+ ++++ .++..+.+..
T Consensus 291 ~~~v~~~~~~A~yl~~~L~~~-Gi~~~~~P~s~~Vvf~-~p---------------~e~i----~~kw~Ls~~~------ 343 (380)
T PRK02769 291 RQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFP-CP---------------SERI----WKKWHLATSG------ 343 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCCEEECCCCEEEEEC-CC---------------CHHH----HHCEEEECCC------
T ss_conf 999999999999999999872-9874707885379962-89---------------9888----5074672159------
Q ss_pred CCEEEEEEE--CCHHHHHHHHHHHHH
Q ss_conf 972899962--999999999999999
Q gi|254780602|r 371 GPSIRISYA--VSDAILEEACVRIKR 394 (400)
Q Consensus 371 ~~~iRis~~--~~~e~l~~al~rl~~ 394 (400)
+..|+.+- .+.|.+++-++-|..
T Consensus 344 -~~~HiVvMPhVt~e~iD~fl~DL~~ 368 (380)
T PRK02769 344 -NQAHIITMPHHNKQQIDSLIDELIF 368 (380)
T ss_pred -CEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf -8269998999999999999999999
No 299
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=98.96 E-value=1.4e-09 Score=78.35 Aligned_cols=269 Identities=14% Similarity=0.128 Sum_probs=140.6
Q ss_pred CCCCEEECCCCC--CCCC-CCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--7498-8999999999998388756998778989999999986421013333223323345433332
Q gi|254780602|r 29 KGIDVLCLTAGE--PDFD-MPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~~-~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
.|+..||+..|. ..+. -+|.|.+|+++.+++..+...... ..+.+..+|+.+.+..+. +-+.|.+++++++|..
T Consensus 14 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~-~~~~~~~lae~l~~~~p~--~~~~v~f~~sGseA~e 90 (338)
T pfam00202 14 DGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQADKLTHTSFRAF-TTEPALQLAEKLAQLTPG--GLDRVFFMNSGSEANE 90 (338)
T ss_pred CCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHCCC--CCCEEEEECCHHHHHH
T ss_conf 9699999661988634169959999999999953898566755-888999999999985788--8687998287689999
Q ss_pred CCCCCCC-------CCC-CCCCCCCCCCCCCCCC-CCCCCCC------------CCCCCCC--CC-CCCCCHHHHHHCCC
Q ss_conf 2222223-------322-3222233332322222-2222222------------2222222--22-32221033310001
Q gi|254780602|r 106 NALMATV-------NMG-DEVLIPRPYWVSYPDM-VALCGGI------------PVFVDTQ--QD-DNFQVSPEKLEQAI 161 (400)
Q Consensus 106 ~~~~~~~-------~~G-d~Vlv~~P~y~~y~~~-~~~~g~~------------~~~v~~~--~~-~~~~~d~~~l~~~i 161 (400)
.+++.-- .+| ..|+..+-+|-..... ....+.. ...+|.. +. .......+++.+.+
T Consensus 91 ~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 170 (338)
T pfam00202 91 TAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEEELACADEALRLI 170 (338)
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99999999777537899887999938825887305881588555556778999945748997354200156689999999
Q ss_pred ----CCCCCCEEECCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCCCCCCEEEEE
Q ss_conf ----2212201211354-21000-012333321112233333201110122110000012233-2221112333225741
Q gi|254780602|r 162 ----TPKTKWLFLNSPS-NPSGV-VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVNVEPSLYERTLVV 234 (400)
Q Consensus 162 ----~~~~k~i~l~nP~-NPTG~-v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~~~~~~~~~~i~~ 234 (400)
.++.-++++ -|= --.|. ..+++.+++|-++| +++++++|.||+...|.-.|.-+. ....+.|+ +++
T Consensus 171 ~~~~~~~iaavii-EPi~g~~G~~~~~~~yl~~lr~lc-~~~gillI~DEV~tGfgRtG~~~~~~~~gv~PD-----iv~ 243 (338)
T pfam00202 171 KAVHDDNIAAVIV-EPIQGEGGVVPPPPGFLAGLREIC-KKHGVLLIADEVQTGFGRTGKLFACEHYGVTPD-----IMT 243 (338)
T ss_pred HHHCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCCEECCCCEECCCCCCCCCHHHHCCCCCE-----EEE
T ss_conf 9858997799999-887788997679879999999997-432775764531008775348740232498875-----999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 465443223445444221101226875310012223322222222222234676432222221100000002455304
Q gi|254780602|r 235 NGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 235 ~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
++|..+ .|+-+|.+++.+++.+.+.......+.+.+.+...++.+.|+.-++ ++..+..+++-+++.+.|+++
T Consensus 244 --~gK~l~-~G~P~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~~l 316 (338)
T pfam00202 244 --LAKALT-GGLPLSAVLATAEIMQAFHPGSHGGTFGGNPLACAAALAVLDIIED--ENLLQNAQEKGDYLRKGLLAL 316 (338)
T ss_pred --ECCCCC-CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHHHH
T ss_conf --564245-8998753116477997177999587776649999999999999965--589999999999999999985
No 300
>KOG2862 consensus
Probab=98.95 E-value=4.9e-09 Score=75.10 Aligned_cols=321 Identities=15% Similarity=0.153 Sum_probs=170.1
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CCC
Q ss_conf 9999983887569987789899999999864210133332233233454333322222223322322223333-23-222
Q gi|254780602|r 52 AVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPY-WV-SYP 129 (400)
Q Consensus 52 a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~-~y~ 129 (400)
++.+|++....+|..+. .+.+-+.+-+-.+.-|... ++.-.++...+..|+..++-.++.|||.|++..-+ |. -+.
T Consensus 31 ~V~~A~~~~~lgh~sPe-~~qIm~~v~egikyVFkT~-n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~ 108 (385)
T KOG2862 31 RVQEAMSRPSLGHMSPE-FVQIMDEVLEGIKYVFKTA-NAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAA 108 (385)
T ss_pred HHHHHHCCCCCCCCCHH-HHHHHHHHHHHHHHHHCCC-CCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHH
T ss_conf 89985067765667878-9999999998789984047-896289836984168998875257897499997233777889
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf 222222222222222222322210333100012-2122012113542100001233332111223333320111012211
Q gi|254780602|r 130 DMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT-PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 130 ~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~ 208 (400)
.+.+..|+++..++.+... ...++++.+++. .+++++++++-.--||..-+ -+..+-++| ++|+.++++|.+-+
T Consensus 109 D~~~r~ga~V~~v~~~~G~--~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~--~~~~~g~lc-~k~~~lllVD~VaS 183 (385)
T KOG2862 109 DCARRYGAEVDVVEADIGQ--AVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQD--LLAISGELC-HKHEALLLVDTVAS 183 (385)
T ss_pred HHHHHHCCEEEEEECCCCC--CCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCH--HHHHHHHHH-HCCCEEEEEECHHH
T ss_conf 9998608655587158556--754999999987158745999834764111155--788887874-06781899720221
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHCCCC------------CCCC---
Q ss_conf 000001223322211123332257414654432234-454442211012268753100122------------2332---
Q gi|254780602|r 209 HIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMT-GLRIGYAAGALSLIKSMIVLQGQQ------------TSGA--- 272 (400)
Q Consensus 209 ~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~-G~RiG~~v~~~~li~~l~~~~~~~------------~~~~--- 272 (400)
+ .+.+| . .+++ ..-+...+--|.++.| |+ +-+..++...++++..++-. ..+.
T Consensus 184 -l--ggt~F---~--mDew-gVDvaytgSQKaL~aP~GL--siisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e 252 (385)
T KOG2862 184 -L--GGTEF---E--MDEW-GVDVAYTGSQKALGAPAGL--SIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGE 252 (385)
T ss_pred -C--CCCCC---E--EHHH-CCCEEEECCHHHCCCCCCC--CEEECCHHHHHHHHHCCCCCEEEEEEHHHHCCHHCCCCC
T ss_conf -4--78641---1--2110-6507884243430799985--603238889999861457754899867761032055886
Q ss_pred ------CCCCCC--CCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCC
Q ss_conf ------222222--22222346-764322222211000000024553047760330274089986264102332113322
Q gi|254780602|r 273 ------CSIAQW--AAVEALNG-PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDV 343 (400)
Q Consensus 273 ------~~~~q~--a~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~ 343 (400)
..+.|. ..-++|.. .++-+++..++-++..+.+...|+++ |++...-+-- +..+....-..+ .
T Consensus 253 ~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~----~rlptvttv~vp---~ 324 (385)
T KOG2862 253 PRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEE----LRLPTVTTVKVP---Y 324 (385)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCEECCHH----HCCCCCEEEECC---C
T ss_conf 3511168848999999999999999878999999999999999999984-8610213764----526750256547---7
Q ss_pred CCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-E--CCHHHHHHHHHHHHHHHHH
Q ss_conf 48989999999987397998350228997289996-2--9999999999999999986
Q gi|254780602|r 344 IRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-A--VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 344 ~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~--~~~e~l~~al~rl~~~l~~ 398 (400)
..|-.+.+.++...++|.+.-|..=-.+..+||.+ + ...+.++.-++-|+..+++
T Consensus 325 gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862 325 GVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CCCHHHHHHHHHHHCCEEECCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 7887999999987167786146677756289998751157728999999999999864
No 301
>KOG1359 consensus
Probab=98.91 E-value=2.2e-08 Score=71.09 Aligned_cols=320 Identities=15% Similarity=0.156 Sum_probs=159.2
Q ss_pred CEEECCCCC-CCCCCCHHHHHHHHHHHHC---CCCCCCCCCC----CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 726656589-7498899999999999838---8756998778----9899999999864210133332233233454333
Q gi|254780602|r 32 DVLCLTAGE-PDFDMPENVKYAVVRAMER---GETKYTAVAG----ISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 32 ~ii~l~~G~-p~~~~p~~i~~a~~~al~~---~~~~Y~~~~G----~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
+|++|...+ -.+...|+|.+|-.+++++ |..+-.-..| +..|-+.||++-++ |+-++-+.+-.+
T Consensus 68 ~ilnFcaNnYLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~r--------ED~ilypscfdA 139 (417)
T KOG1359 68 KILNFCANNYLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGR--------EDTILYPSCFDA 139 (417)
T ss_pred CEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHCC--------CCEEEECCCCCC
T ss_conf 504422454334457838889899999982878643168844557999999999987087--------754873310034
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC--CCCCEEECCCC--CCCCC
Q ss_conf 322222223322322223333232222222222222222222223222103331000122--12201211354--21000
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP--KTKWLFLNSPS--NPSGV 179 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~--~~k~i~l~nP~--NPTG~ 179 (400)
..-++-++.+|.|.|+--+ .++.+++ -|.+ +-+ ..-..|.-+++....+ +.|.-++.+-. .=.|.
T Consensus 140 Nag~feail~pedAvfSDe---LNhASII--dGir-----Lck-ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGd 208 (417)
T KOG1359 140 NAGAFEAILTPEDAVFSDE---LNHASII--DGIR-----LCK-RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGD 208 (417)
T ss_pred CHHHHHHHCCHHHHHHCCC---CCCCHHH--HHHH-----HHH-HHCCCHHHHHHHHHHHHHHHEEEEEEECCEECCCCC
T ss_conf 4377877448254121000---0220343--2467-----776-644512677888777743321799985461214787
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 01233332111223333320111012211000001223322211123332257414654432234454442211012268
Q gi|254780602|r 180 VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIK 259 (400)
Q Consensus 180 v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~ 259 (400)
+- -+++|+++ +++++.+++.||+|....|+. ..........-+.+..|..++++|..+ |---||..+|++++.
T Consensus 209 ia---Pl~ei~~L-a~kYgaLlfiDecHaTgf~G~-tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp~~li~ 281 (417)
T KOG1359 209 IA---PLEEISQL-AKKYGALLFIDECHATGFFGE-TGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGPKPLIS 281 (417)
T ss_pred CC---CHHHHHHH-HHHCCCEEEEEECCCCEEECC-CCCCHHHHHCCCCCCEEHHHHHHHHHC--CCCCCCCCCCHHHHH
T ss_conf 33---38999999-986293799860431056557-888738873777764020424566624--777887468756899
Q ss_pred HHHHH-CCCCCCCCCCCCCC-CCCCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf 75310-01222332222222-2222234---6764322222211000000024553047760330274089986264102
Q gi|254780602|r 260 SMIVL-QGQQTSGACSIAQW-AAVEALN---GPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLI 334 (400)
Q Consensus 260 ~l~~~-~~~~~~~~~~~~q~-a~~~~l~---~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~ 334 (400)
-+... +.+..++.-+|.-. .+.++++ .....+.. .+.+-+.+.+.++. .|+++.-.. .+-++-..
T Consensus 282 llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~----~~a~~qrfr~~me~-aGftIsg~~-----hPI~pv~l 351 (417)
T KOG1359 282 LLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQS----RQANTQRFREFMEA-AGFTISGAS-----HPICPVML 351 (417)
T ss_pred HHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHH-CCCEECCCC-----CCCCCEEC
T ss_conf 998528861421789805541569999999864799998----98899999998875-282431788-----87423231
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--CCC--EEEEEEE--CCHHHHHHHHHHHHHHH
Q ss_conf 33211332248989999999987397998350228--997--2899962--99999999999999999
Q gi|254780602|r 335 GKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--HGP--SIRISYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~~~--~iRis~~--~~~e~l~~al~rl~~~l 396 (400)
+ + -+....++++||+. |+.|.. ..|- ++| -+|+.++ .++|+++..++.+....
T Consensus 352 G------d-a~lA~~~ad~lLk~-Gi~Vig-fs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vg 410 (417)
T KOG1359 352 G------D-ARLASKMADELLKR-GIYVIG-FSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVG 410 (417)
T ss_pred C------C-HHHHHHHHHHHHHC-CCEEEE-ECCCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHH
T ss_conf 6------3-88888889999855-716986-2587678884479999701047888999999999988
No 302
>KOG1357 consensus
Probab=98.90 E-value=2.1e-08 Score=71.29 Aligned_cols=316 Identities=17% Similarity=0.163 Sum_probs=158.3
Q ss_pred EEECCC------CCCCCCCCHHHHHHHHHHHHCCCCCCCCC---CCC----HHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 266565------89749889999999999983887569987---789----89999999986421013333223323345
Q gi|254780602|r 33 VLCLTA------GEPDFDMPENVKYAVVRAMERGETKYTAV---AGI----SPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 33 ii~l~~------G~p~~~~p~~i~~a~~~al~~~~~~Y~~~---~G~----~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
++||+. +....+..+.+.+++.+. .+.++.+ .|. .++-+.+|+++ |. ++-+++.-|
T Consensus 138 ~lNlgSYNYLGFa~~~g~ca~~~~~~~~ky----gl~~css~~e~G~~~~hkelE~l~A~f~----g~---e~a~vF~mG 206 (519)
T KOG1357 138 CLNLGSYNYLGFAQSVGPCAEASLKSFDKY----GLSRCSSRHEAGTTEEHKELEELVARFL----GV---EDAIVFSMG 206 (519)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHHH----CCCCCCCCHHCCCHHHHHHHHHHHHHHC----CC---CCEEEEECC
T ss_conf 542033223342346887761899999984----6333664200363788878999999866----88---644897415
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC-------CCC----CCE
Q ss_conf 433332222222332232222333323222222222222222222222322210333100012-------212----201
Q gi|254780602|r 100 AKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT-------PKT----KWL 168 (400)
Q Consensus 100 ~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~-------~~~----k~i 168 (400)
-..-...+.+++.||.-|+--.-.-.....-+++.|+.++-+. .| |+++|++.+. |+| |-+
T Consensus 207 -f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfk---HN----dm~~LEr~Lrd~I~~gqP~Thrp~kki 278 (519)
T KOG1357 207 -FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFR---HN----DMQGLERLLRDAIVYGQPKTHRPWKKI 278 (519)
T ss_pred -CCCCCCCCCEEECCCCCEEEHHCCCHHEEECCCCCCCEEEEEE---CC----CHHHHHHHHHHHHHCCCCCCCCCCHHE
T ss_conf -4345567622445886164400033002303031585479986---38----877799999988752787768850220
Q ss_pred EECCCCCCCCCCCCCC----CCCCCCCCCCCCCCCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 2113542100001233----3321112233333201110122110000--012233222111233322574146544322
Q gi|254780602|r 169 FLNSPSNPSGVVYSQN----RLRALADVLVRNPHVHIISDDIYEHIVY--RNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 169 ~l~nP~NPTG~v~s~~----~l~~i~~~~a~~~~i~ii~De~Y~~l~~--~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
++| -+-++|-| .+.+++.. .|++..+++.||+|+-=.- .|.-..-+...++ .|..|.+++|.|+|+
T Consensus 279 ~ii-----vegiysmEg~iv~Lp~vval-kkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~--~dvDImMGtftKSfg 350 (519)
T KOG1357 279 LIC-----VEGIYSMEGTIVDLPEVVAL-KKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDP--EDVDIMMGTFTKSFG 350 (519)
T ss_pred EEE-----ECCCCCCCCEECCCHHHHHH-HCCCCEEEEEECCCCCCCCCCCCCCEEECCCCCC--HHHEEECCEEHHHCC
T ss_conf 342-----01101056721161998875-2043379984010002553788874223468882--462022010021045
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCCCCCCCCC--CCCCC--CCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 344544422110122687531001---222332222222222--22346--76432222221100000002455304776
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQG---QQTSGACSIAQWAAV--EALNG--PQDFVVNNRKIFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~---~~~~~~~~~~q~a~~--~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~g~ 315 (400)
..| ||+.+++++++.+..... +.++.++.+.|.... ..+.+ +-+.-++..+++.++..++...|++. |+
T Consensus 351 a~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gf 426 (519)
T KOG1357 351 AAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GF 426 (519)
T ss_pred CCC---CEECCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC-CE
T ss_conf 666---60028388774100478842420367828899999878752488764077999999875028998751048-28
Q ss_pred EEEECCCCE--EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC----CEEEEEEE--CCHHHHHH
Q ss_conf 033027408--99862641023321133224898999999998739799835022899----72899962--99999999
Q gi|254780602|r 316 RYMIPDGAF--YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHG----PSIRISYA--VSDAILEE 387 (400)
Q Consensus 316 ~~~~p~g~~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~----~~iRis~~--~~~e~l~~ 387 (400)
.+.--+-+- -+.+.. ...-..|.+.|+++ ++.++- -+|-.. .-+|++.+ ...|.+..
T Consensus 427 ivyG~~dSpVvplll~~-------------~~k~~~f~r~~l~~-nigvVv-vgfPatpl~e~r~R~c~Sa~ht~e~ld~ 491 (519)
T KOG1357 427 IVYGNNDSPVVPLLLYG-------------PAKIVAFSREMLER-NIGVVV-VGFPATPLLESRARFCLSASHTKEDLDR 491 (519)
T ss_pred EEECCCCCCCCEEEECC-------------CCCCCHHHHHHHHC-CCEEEE-EECCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf 99167888764366327-------------53140789999864-735999-7279945777677865423555788999
Q ss_pred HHHHHHH
Q ss_conf 9999999
Q gi|254780602|r 388 ACVRIKR 394 (400)
Q Consensus 388 al~rl~~ 394 (400)
+++.+.+
T Consensus 492 ~l~~i~~ 498 (519)
T KOG1357 492 ALEVIDR 498 (519)
T ss_pred HHHHHHH
T ss_conf 9998866
No 303
>PRK04311 selenocysteine synthase; Provisional
Probab=98.89 E-value=1.8e-08 Score=71.72 Aligned_cols=332 Identities=16% Similarity=0.116 Sum_probs=177.4
Q ss_pred CCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 8899999999999838-87569987789899999-999864210133332233233454333322222223322322223
Q gi|254780602|r 44 DMPENVKYAVVRAMER-GETKYTAVAGISPLREA-IVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP 121 (400)
Q Consensus 44 ~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~a-ia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~ 121 (400)
|.++.+.+++.+.... ..+.|--..|-..-|.. +.+.+.+..| .|..++.|.-..|+++++.+++ .|.+|+|.
T Consensus 99 pL~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R~~~v~~ll~~ltg----aE~a~vVNNNAaAv~L~l~~la-~gkEviVS 173 (465)
T PRK04311 99 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCELTG----AEDALVVNNNAAAVLLALNALA-AGKEVIVS 173 (465)
T ss_pred CCCHHHHHHHHHHHCCCCHHHHECCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCHHHHHHHHHHHH-CCCEEEEE
T ss_conf 788999999999962872155220138898708999999998549----8737998284899999999862-79859996
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCCCC
Q ss_conf 3------3323222222222222222222222322210333100012212201211354210000123-33321112233
Q gi|254780602|r 122 R------PYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQ-NRLRALADVLV 194 (400)
Q Consensus 122 ~------P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~-~~l~~i~~~~a 194 (400)
. .+-+-.+.+.+..|++.+.|-+... --+.+.+++|+++|.+++-++++|=--.=++. -.+++|+++ +
T Consensus 174 RGelvEIGGsFRiPdim~~sGa~L~EVGtTNr----T~l~DY~~AI~~~Ta~llkvH~SN~~i~GFt~~v~~~eL~~l-~ 248 (465)
T PRK04311 174 RGELVEIGGAFRIPDVMRQAGAKLVEVGTTNR----THLRDYEDAINENTALLLKVHTSNYRIVGFTKEVSEAELAAL-G 248 (465)
T ss_pred CCCEEEECCCCCCHHHHHHCCCEEEECCCCCC----CCHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH-H
T ss_conf 45356526765627899865988874376788----887999986495654899995687654674688999999999-9
Q ss_pred CCCCCEEECCCCCCCCCCCCC----C-CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 333201110122110000012----2-33222111233322574146544322344544422110122687531001222
Q gi|254780602|r 195 RNPHVHIISDDIYEHIVYRNC----Q-FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT 269 (400)
Q Consensus 195 ~~~~i~ii~De~Y~~l~~~~~----~-~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~ 269 (400)
+++++.+++|---..|. +-. + -++...... ..--++++|--|-+| |-..|.+++.+++|+++++-.-...
T Consensus 249 ~~~~ip~~~DlGSG~l~-~~~~~gl~~Ep~v~~~l~--~GaDLVtFSGDKLLG--GPQAGIIvGkk~lI~~lkknPL~RA 323 (465)
T PRK04311 249 KEHGLPVVVDLGSGSLV-DLSQYGLPDEPTVQELLA--AGVDLVTFSGDKLLG--GPQAGIIVGKKELIERLKKHPLKRA 323 (465)
T ss_pred HHCCCCEEEECCCCCCC-CCCCCCCCCCCCHHHHHH--CCCCEEEEECCCCCC--CCCCCEEECHHHHHHHHHHCCCHHH
T ss_conf 87599279988875213-653126999998899997--299889985540147--9854337400999999986876142
Q ss_pred CCCCCCCCCCCCCCC----CCCC--------CCCCCCCCCCCCCCCCHHHHHHCCC-CC--EEEEC----CCCEEEEEEC
Q ss_conf 332222222222223----4676--------4322222211000000024553047-76--03302----7408998626
Q gi|254780602|r 270 SGACSIAQWAAVEAL----NGPQ--------DFVVNNRKIFEYRRDLCVAQLQGVP-GI--RYMIP----DGAFYLYPSC 330 (400)
Q Consensus 270 ~~~~~~~q~a~~~~l----~~~~--------~~~~~~~~~~~~~r~~~~~~L~~~~-g~--~~~~p----~g~~y~~~~~ 330 (400)
.-+......+..+.| +... ..+....+.+++|.+.+.+.|++.. ++ ++.+. -||-+=-.++
T Consensus 324 lRvDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~~~~~~~v~i~~~~s~vGGGslP~~~l 403 (465)
T PRK04311 324 LRVDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKAALGEFAVSVVPSFSQVGGGSLPVDRL 403 (465)
T ss_pred HCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 32599999999999999959210001176899875999999999999999987425784289997766457887878878
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE-ECCHHHHHHHHHHHHHHHH
Q ss_conf 410233211332248989999999987397998350228997289996-2999999999999999998
Q gi|254780602|r 331 QDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY-AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~-~~~~e~l~~al~rl~~~l~ 397 (400)
+... ........+..++..+| ++..+-++.-. .++.+-+-+ +..+++.+.-.++|++.++
T Consensus 404 pS~~---v~i~~~~~s~~~L~~~L-R~~~~PII~RI---~~d~~~LDlRTi~~~d~~~i~~~l~~il~ 464 (465)
T PRK04311 404 PSAA---LTLTPKGRSLEALAARL-RLLPPPVIGRI---EDGRLLLDLRTLEEEDEEALAAALLELLN 464 (465)
T ss_pred CEEE---EEEECCCCCHHHHHHHH-HCCCCCEEEEE---ECCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 8679---99857999999999998-36999889999---88979999163897899999999999961
No 304
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=98.85 E-value=1.4e-09 Score=78.34 Aligned_cols=263 Identities=19% Similarity=0.150 Sum_probs=153.1
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCC-CCCCCCCCCCHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2665658974988999999999998388-7569987789899999-9998642101333322332334543333222222
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMERG-ETKYTAVAGISPLREA-IVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~~-~~~Y~~~~G~~~lR~a-ia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
|++-+.|-. |.|+.+.+++.++...- ...|--..|-..-|.. +.+.+.+.. ..|..+++|....|+++++.+
T Consensus 8 vlHTnLGRa--~l~~~a~~a~~~~~~~y~nLE~dl~~g~RG~R~~~~~~ll~~lt----gaE~a~vVNnnAaAv~L~l~~ 81 (367)
T pfam03841 8 VLHTNLGRA--LLSEEAVEAAKEAARHYSNLEYDLESGKRGSRDSHLEELLCELT----GAEDALVVNNNAAAVLLVLNT 81 (367)
T ss_pred EECCCCCCC--CCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHH----CCCEEEEECCCHHHHHHHHHH
T ss_conf 653678777--89999999999986177203666741776635789999999863----986599987838999999998
Q ss_pred CCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC-
Q ss_conf 2332232222333------323222222222222222222222322210333100012212201211354210000123-
Q gi|254780602|r 111 TVNMGDEVLIPRP------YWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQ- 183 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P------~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~- 183 (400)
+. .|.+|+|..= .=.-.+.+.+..|++++.|-+... -.+.+++++|+++|.+++-.+++|..-.=++.
T Consensus 82 la-~g~evivSRGelVeiGgsfRiPdim~~sGa~LvEVGtTNr----T~l~DYe~AI~e~Ta~llkVH~SN~~i~GFt~~ 156 (367)
T pfam03841 82 LA-QGKEVIISRGELVEIGGSFRIPDIMKQSGARLVEVGTTNR----THLKDYEQAINENTALLMKVHTSNYRIQGFTKE 156 (367)
T ss_pred HH-CCCCEEEECCEEECCCCCCCCHHHHHHCCCEEEEECCCCC----CCHHHHHHHCCCCCEEEEEEECCCCEECCCCCC
T ss_conf 75-4890577555451238754408999965978998256688----898999987082461899994265122374677
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC-----CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 333211122333332011101221100000122-----332221112333225741465443223445444221101226
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ-----FSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI 258 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~-----~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li 258 (400)
-.+++++++ +++|++.+++|--=..+. |-.+ -+++..... ..--++++|--|-+| |-..|.+++.+++|
T Consensus 157 v~~~el~~l-a~~~~ip~i~DlGSG~l~-d~~~~gl~~Ep~v~~~l~--~GaDlV~FSGDKLLG--GPQAGII~Gkk~lI 230 (367)
T pfam03841 157 VSLAELVAL-GKEHGLPVYYDLGSGSLV-DLSQYGLPKEPTVQELLA--LGVDLVSFSGDKLLG--GPQAGIIVGKKELI 230 (367)
T ss_pred CCHHHHHHH-HHHCCCCEEEECCCCCEE-CCCCCCCCCCCCHHHHHH--CCCCEEEEECCCCCC--CCCCCEEEECHHHH
T ss_conf 999999999-987699679975866311-220017999998999997--399889986764568--98532476459999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCC---------CCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 8753100122233222222222222346---764---------32222221100000002455304
Q gi|254780602|r 259 KSMIVLQGQQTSGACSIAQWAAVEALNG---PQD---------FVVNNRKIFEYRRDLCVAQLQGV 312 (400)
Q Consensus 259 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~---~~~---------~~~~~~~~~~~~r~~~~~~L~~~ 312 (400)
+++++-.-....-+..+...+..+.|.. ++. .+....+.+++|.+.+.+.|+..
T Consensus 231 ~~ikknPL~RAlRvDKltLaaLeatL~~Yl~~~~~~~~IP~l~mL~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T pfam03841 231 ERLKKNPLKRALRVDKLTLAALEATLRLYLNPEKLYEKIPTLRLLTQPLKELRAKAERLQKLLKAR 296 (367)
T ss_pred HHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 974647444544458899999999999984900000116589986399999999999999997675
No 305
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.85 E-value=1.9e-08 Score=71.46 Aligned_cols=275 Identities=15% Similarity=0.152 Sum_probs=132.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCC----C----CC------CCCCCCCCCCCCCCCC-CCCCCCCCCC---CCC--------
Q ss_conf 3223323345433332222222----3----32------2322223333232222-2222222222---222--------
Q gi|254780602|r 90 TSDQIIVGTGAKHVIFNALMAT----V----NM------GDEVLIPRPYWVSYPD-MVALCGGIPV---FVD-------- 143 (400)
Q Consensus 90 ~~e~I~it~G~~~~l~~~~~~~----~----~~------Gd~Vlv~~P~y~~y~~-~~~~~g~~~~---~v~-------- 143 (400)
.-++|++++++++|+..++... . .. +.+|+...-+|-.-.. .....|..+. +.|
T Consensus 118 ~l~~vff~nsGSEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~gals~tg~~~~~~~~~p~~~~~~~~ 197 (449)
T PRK08297 118 ALPHLFFVDGGALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSGYTLSLTNTDPVKTARFPKFDWPRID 197 (449)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCC
T ss_conf 77758861876899999999999986543002367776775699963653796077788617985335788888887788
Q ss_pred -------CCCCCC--C-CCHHHHHHCCCCC---CCCCEEECCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf -------222232--2-2103331000122---1220121135-42100-001233332111223333320111012211
Q gi|254780602|r 144 -------TQQDDN--F-QVSPEKLEQAITP---KTKWLFLNSP-SNPSG-VVYSQNRLRALADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 144 -------~~~~~~--~-~~d~~~l~~~i~~---~~k~i~l~nP-~NPTG-~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~ 208 (400)
.+.+.. . .-+++++++.+.. ++-++++ -| +--.| .+.+++-++++-++| ++||+++|.||+..
T Consensus 198 ~P~~~~~~~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvIv-EPIqG~gG~~~~p~~yl~~lr~lc-~~~giLLI~DEVqt 275 (449)
T PRK08297 198 APYVRPGLDADAVAALEAEALRQARAAFEAHPHDIACFIA-EPIQGEGGDRHFRPEFFAAMRALC-DEHDALLIFDEVQT 275 (449)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEECCCCEE
T ss_conf 9987789873016678999999999999858997799999-678747799889989999999999-97188454452202
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHH---HHHHHHHHC--CCCCCCCCCCCCCCCCC
Q ss_conf 00000122332-2211123332257414654432234454442211012---268753100--12223322222222222
Q gi|254780602|r 209 HIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALS---LIKSMIVLQ--GQQTSGACSIAQWAAVE 282 (400)
Q Consensus 209 ~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~---li~~l~~~~--~~~~~~~~~~~q~a~~~ 282 (400)
.+.=.|.-+.+ -..+.|+ |+ +++|..+. |.+.+... ......... ...+.+.+.+...++.+
T Consensus 276 GfGRTG~~fa~e~~gv~PD-----ii--t~~Kgl~~-----G~~~~~~~~~~~~~~~~~~~~~~~sTf~Gnp~acaaala 343 (449)
T PRK08297 276 GCGLTGTAWAYQQLGVAPD-----VV--AFGKKTQV-----CGVMAGRRVDEVADNVFAVSSRINSTWGGNLTDMVRARR 343 (449)
T ss_pred CCCCCCCHHHCCCCCCCCC-----EE--EECCCCCC-----CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 7876765133133589998-----89--87763345-----507788999999988641687778888988899999999
Q ss_pred CCCCC--CCCCCCCCCCCCCCCCCHHHHHHCC----CCC-EEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 23467--6432222221100000002455304----776-0330274089986264102332113322489899999999
Q gi|254780602|r 283 ALNGP--QDFVVNNRKIFEYRRDLCVAQLQGV----PGI-RYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLL 355 (400)
Q Consensus 283 ~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~----~g~-~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll 355 (400)
.|+-- ++.+++ .++.-+++.+.|+++ |.+ .=++.. |+++=+++++. ....+++..+
T Consensus 344 ~L~ii~~e~l~~~----~~~~g~~l~~~L~~l~~~~p~ii~dVRG~-GLm~giel~~~-----------~~~~~~~~~~- 406 (449)
T PRK08297 344 ILEVIEAEGLFDR----ARQQGAYLLARLDELAAEFPAVVLDPRGR-GLMCAFSLPTT-----------ADRDELIRRL- 406 (449)
T ss_pred HHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHCCCCEEEEEEC-CEEEEEECCCH-----------HHHHHHHHHH-
T ss_conf 9999843049999----99999999999999997689844653115-68999982886-----------7899999999-
Q ss_pred HHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 8739799835022899728999--6299999999999999999860
Q gi|254780602|r 356 EIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 356 ~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~rl~~~l~~l 399 (400)
.++|+++.|.. .+.||++ +..+++++++++++|++.|++|
T Consensus 407 ~~~Gll~~~~g----~~~irl~PPL~it~~eid~~~~~l~~al~el 448 (449)
T PRK08297 407 WRERVILLPAG----EDSVRFRPALTVSRAEIDAAVDAVRRVLRTL 448 (449)
T ss_pred HHCCCEEEECC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 97895897579----9979998991288999999999999999986
No 306
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.79 E-value=1.5e-07 Score=66.02 Aligned_cols=328 Identities=11% Similarity=0.045 Sum_probs=158.1
Q ss_pred CHHHHHHHHHHHHCCCCCCC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCC-
Q ss_conf 99999999999838875699-8778989999999986421013333223323345433332222222-------33223-
Q gi|254780602|r 46 PENVKYAVVRAMERGETKYT-AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT-------VNMGD- 116 (400)
Q Consensus 46 p~~i~~a~~~al~~~~~~Y~-~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~-------~~~Gd- 116 (400)
-+.+.+|+.+.+++=.+-+. ...+.|. ..+|+.+-+...- -+-++|++|++++++...++... -+|+.
T Consensus 62 ~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa--~~LA~~L~~~aP~-~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~ 138 (449)
T COG0161 62 RPEIAEAIKKQLDKLPHVMFGGFTHEPA--IELAEKLAELAPE-GGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRK 138 (449)
T ss_pred CHHHHHHHHHHHHHCCCCHHCCCCCCHH--HHHHHHHHHHCCC-CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCE
T ss_conf 7799999999998577401145578369--9999999986798-775679980896189999999999999965997531
Q ss_pred CCCCCCCCCCCCCC-CCCCCC-------------CCCCCCCC------CCCCCCC----CHHHHHHCCCCC----CCCCE
Q ss_conf 22223333232222-222222-------------22222222------2223222----103331000122----12201
Q gi|254780602|r 117 EVLIPRPYWVSYPD-MVALCG-------------GIPVFVDT------QQDDNFQ----VSPEKLEQAITP----KTKWL 168 (400)
Q Consensus 117 ~Vlv~~P~y~~y~~-~~~~~g-------------~~~~~v~~------~~~~~~~----~d~~~l~~~i~~----~~k~i 168 (400)
.+|.-..+|-.-.- .....| ....+++. ..++.+. -..++|++.|.. +.-++
T Consensus 139 ~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAf 218 (449)
T COG0161 139 KFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAF 218 (449)
T ss_pred EEEEECCCCCCCCCHHEECCCCHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 89995267476653001356854555430144455762268996434577777748899999999999986095528999
Q ss_pred EECCC-CC-CCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 21135-42-10000-123333211122333332011101221100000122332-2211123332257414654432234
Q gi|254780602|r 169 FLNSP-SN-PSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN-IVNVEPSLYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 169 ~l~nP-~N-PTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s-~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (400)
+ .-| .. -+|.. +++.-++++-++| ++||+++|.||+=..|.=.|.-|-+ -..+.|+ .+ +++|.++-.
T Consensus 219 I-~EPv~g~agG~~~pp~~Yl~~vr~iC-~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PD----i~---~~aKGLT~G 289 (449)
T COG0161 219 I-VEPVVGGAGGMLVPPPGYLKRVREIC-DKYGILLIADEVATGFGRTGKMFACEHAGIVPD----IL---CLAKGLTGG 289 (449)
T ss_pred E-ECCCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEECCCEECCCCCCHHHHHHHCCCCCC----EE---EECCCCCCC
T ss_conf 9-55200566775418768999999999-983947993011007885751556652599978----46---551310126
Q ss_pred CCCCCCCCCHHHHHHHHHHH------CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHC-CC--
Q ss_conf 45444221101226875310------0122233222222222222346--7643222222110000000245530-47--
Q gi|254780602|r 245 GLRIGYAAGALSLIKSMIVL------QGQQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRDLCVAQLQG-VP-- 313 (400)
Q Consensus 245 G~RiG~~v~~~~li~~l~~~------~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~-~~-- 313 (400)
=+-+|.++..+++.+.+..- +.++.+ .+.+...++++-|+- .++++++.+ +.-..+.+.|++ +.
T Consensus 290 Y~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYs-ghPlacAaAla~L~i~e~e~l~~~~~----~~~~~l~~~L~~~l~~~ 364 (449)
T COG0161 290 YLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYS-GNPLACAAALANLDILEEEDLLERVA----EIGAYLQAGLQAALADH 364 (449)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC-CCHHHHHHHHHHHHHHHHCCHHHHHH----HHHHHHHHHHHHHCCCC
T ss_conf 50107675059999998646687014478664-48999999998899998567999999----99999999998751369
Q ss_pred -CCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCHHHHHHHHH
Q ss_conf -7603302740899862641023321133224898999999998739799835022899728999--6299999999999
Q gi|254780602|r 314 -GIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSDAILEEACV 390 (400)
Q Consensus 314 -g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~e~l~~al~ 390 (400)
.+.=++.-| +..=+++..-.....+. ...-..-+...+.+.||.+.|..+ .+=++ |..+++++.+.++
T Consensus 365 p~VgdVR~~G-li~~iElv~d~~t~~~f---~~~~~~~~~~~~~e~Gl~iRp~g~-----~i~~~PPliit~~eid~l~~ 435 (449)
T COG0161 365 PLVGDVRGLG-LIGAIELVADKATKTPF---EARVGARVRAAALERGLLIRPLGD-----VIYLMPPLIITREEIDELVD 435 (449)
T ss_pred CCEEEEECCC-EEEEEEEECCCCCCCCC---HHHHHHHHHHHHHHCCEEEEECCC-----EEEECCCCCCCHHHHHHHHH
T ss_conf 9278722265-59999984156666640---456999999999978938955598-----89973883489999999999
Q ss_pred HHHHHHHHC
Q ss_conf 999999860
Q gi|254780602|r 391 RIKRFCHSL 399 (400)
Q Consensus 391 rl~~~l~~l 399 (400)
++++.++..
T Consensus 436 ~l~~al~~~ 444 (449)
T COG0161 436 ALREALDET 444 (449)
T ss_pred HHHHHHHHH
T ss_conf 999999998
No 307
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=98.78 E-value=4e-08 Score=69.57 Aligned_cols=346 Identities=17% Similarity=0.195 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHCC--C--CEEECCCCCCCCCCCHHHHHHHHHH--HHCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9999999999869--9--7266565897498899999999999--8388756998---7789899999999864210133
Q gi|254780602|r 18 VAAQRVRDLRSKG--I--DVLCLTAGEPDFDMPENVKYAVVRA--MERGETKYTA---VAGISPLREAIVEKFRRDNDLH 88 (400)
Q Consensus 18 ~~~~~~~~~~~~g--~--~ii~l~~G~p~~~~p~~i~~a~~~a--l~~~~~~Y~~---~~G~~~lR~aia~~~~~~~g~~ 88 (400)
++......+..++ . .+|+|+..-+.+. |.+-+.+..- + ...+-|.| ++|..++-..+.+++..-.|++
T Consensus 55 ev~Rh~~~Ls~kn~~~d~~~~pLGSCTMKyN--p~~~e~~a~~p~f-~~~HP~qp~~~~QG~Lq~i~elq~~L~eITGmd 131 (490)
T PRK04366 55 EVVRHYTRLSQKNYGVDTGFYPLGSCTMKYN--PKINEKVARLPGF-AELHPLQPEETVQGALELMYELQEWLKEITGMD 131 (490)
T ss_pred HHHHHHHHHHHCCCCCCCCCEECCCCCCCCC--HHHHHHHHCCHHH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999723584556305651215448--7988577428435-526999987888999999999999999985998
Q ss_pred CCCCCCCCCCCCCCCCCC---CCCCCC-CCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 332233233454333322---222223-322----322223333232222222222222222222223222103331000
Q gi|254780602|r 89 YTSDQIIVGTGAKHVIFN---ALMATV-NMG----DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 89 ~~~e~I~it~G~~~~l~~---~~~~~~-~~G----d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
. -..-...|++ |-+. ++++.. ..| ++||||+-.-......+.++|.+++.+++++++ .+|+++|+++
T Consensus 132 ~--vSlqP~aGAq-GE~aGll~Irayh~~~G~~~R~~vLiP~SAHGTNPAsA~maG~~Vv~v~~~~~G--~vDle~Lka~ 206 (490)
T PRK04366 132 A--VTLQPAAGAH-GELTGLLIIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDG--LVDLEALKAA 206 (490)
T ss_pred E--EEECCCCCHH-HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEECCCCCC--CCCHHHHHHH
T ss_conf 5--8406898559-999999999999997598577679985556789878887559446882579899--8199999998
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-C-CCCCEEEEECCCC
Q ss_conf 1221220121135421000012333321112233333201110122110000012233222111-2-3332257414654
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-P-SLYERTLVVNGVS 238 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~-~~~~~~i~~~S~S 238 (400)
+++++.+++++||| =.|. + .+++++|++++ .+.+-++- |||.....+.... | ++.-.+.+++ +.
T Consensus 207 ~~~~~A~lMiTnPn-t~Gv-f-E~~i~ei~~iv-H~~Ggl~Y---------~DGANlNAi~G~~rPgd~G~Dv~HlN-LH 272 (490)
T PRK04366 207 VGEDTAALMLTNPN-TLGL-F-ERNIKEIAEIV-HEAGGLLY---------YDGANLNAILGKVRPGDMGFDVVHLN-LH 272 (490)
T ss_pred HHHHHHEEEEECCC-CCCC-H-HHHHHHHHHHH-HHCCCEEE---------ECCCCCCCCCCCCCHHHCCCCEEEEE-CC
T ss_conf 75310313551576-5360-2-24899999999-97199898---------65756200013147766587457531-34
Q ss_pred CCCCCC----CCCCCCCCCHHHHHHHHHHH---C---CCC-CC-CCCCCCCC-----------CCCCCC-CCCCCCCCCC
Q ss_conf 432234----45444221101226875310---0---122-23-32222222-----------222223-4676432222
Q gi|254780602|r 239 KAYAMT----GLRIGYAAGALSLIKSMIVL---Q---GQQ-TS-GACSIAQW-----------AAVEAL-NGPQDFVVNN 294 (400)
Q Consensus 239 K~~~~~----G~RiG~~v~~~~li~~l~~~---~---~~~-~~-~~~~~~q~-----------a~~~~l-~~~~~~~~~~ 294 (400)
|+|+.| |--.|-+...+++..-+-.- . .+. .. .+.++... .+-.++ .-+.+.+.+.
T Consensus 273 KTFstPHGGGGPG~Gpv~v~~~L~pfLP~P~v~~~~~~y~l~~~~~~siG~v~~f~Gn~~vl~ra~~Yi~~lG~~GL~~~ 352 (490)
T PRK04366 273 KTFSTPHGGGGPGSGPVGVKKELAPFLPVPVVEKDGGRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREV 352 (490)
T ss_pred CCCCCCCCCCCCCCCCEEHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 23445788888887753255441200888702136883112678876632112024751889999999998667478999
Q ss_pred CCCCCCCCCCHHHHHHCCCCCEEEECCCCE--EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC--C
Q ss_conf 221100000002455304776033027408--998626410233211332248989999999987397998350228--9
Q gi|254780602|r 295 RKIFEYRRDLCVAQLQGVPGIRYMIPDGAF--YLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG--H 370 (400)
Q Consensus 295 ~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~--y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg--~ 370 (400)
-+.---|.+++.+.|++.-.+.+ ++--+ |+ ++... .......+..+++++|++ +|.. .|-..|- -
T Consensus 353 s~~AvLNANYl~~~L~~~~~~~y--~~~~~HEfv-~~~~~------~~k~~gv~~~DiaKrLlD-yG~H-~pT~~fPliV 421 (490)
T PRK04366 353 SEDAVLNANYLMARLKDVYDLPY--PRRCMHEFV-LSGKR------LKKETGVRALDIAKRLLD-YGFH-PPTIYFPLIV 421 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCC--CCCEEEEEE-ECCHH------HHHHCCCCHHHHHHHHHC-CCCC-CCCCCCCCCC
T ss_conf 99999999999998535575788--997678999-64377------544239989999999857-7999-7610166657
Q ss_pred CCEEEEEEE--CCHHHHHHHHHHHHHHH
Q ss_conf 972899962--99999999999999999
Q gi|254780602|r 371 GPSIRISYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 371 ~~~iRis~~--~~~e~l~~al~rl~~~l 396 (400)
++.+=|--+ .+.++|++-++.|++..
T Consensus 422 ~e~lmiEPTEsEske~LD~f~~am~~I~ 449 (490)
T PRK04366 422 PEALMIEPTETESKETLDAFIDAMKEIA 449 (490)
T ss_pred CCCEEECCCCCCCHHHHHHHHHHHHHHH
T ss_conf 8731536757779999999999999999
No 308
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.74 E-value=1.1e-08 Score=73.02 Aligned_cols=229 Identities=19% Similarity=0.156 Sum_probs=138.5
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 26656589749889999999999983887-56998778989999-99998642101333322332334543333222222
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLRE-AIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~-aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
|++-+.|.+- ..+++.+++.++++... ..|--..|...-|- .++... .+.. ..+.++++|..+.++.++..+
T Consensus 29 v~~t~lG~s~--~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~---~~~~-~aea~~ivnnn~aAVll~~~a 102 (395)
T COG1921 29 VLMTNLGRSL--YSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELL---CGLT-GAEAAAIVNNNAAAVLLTLNA 102 (395)
T ss_pred HEECCCCCCC--CCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH---HCCC-CHHHEEEECCCHHHHHHHHHH
T ss_conf 1001278766--798999999998505430356401231357779999998---3664-403325678828999998763
Q ss_pred CCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCC-CCCCCCCC
Q ss_conf 233223222------23333232222222222222222222223222103331000122122012113542-10000123
Q gi|254780602|r 111 TVNMGDEVL------IPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSN-PSGVVYSQ 183 (400)
Q Consensus 111 ~~~~Gd~Vl------v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~N-PTG~v~s~ 183 (400)
+..++ +|+ ++ ++=+....+++.+|++.+.+-... .....+++.+|+++|++++-+.-+| +--...+.
T Consensus 103 l~~~~-EvVis~g~lV~-gg~~~v~d~~~~aG~~l~EvG~tn----~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~~ 176 (395)
T COG1921 103 LAEGK-EVVVSRGELVE-GGAFRVPDIIRLAGAKLVEVGTTN----RTHLKDYELAINENTALLLKVHSSNYGFTGMLSE 176 (395)
T ss_pred HCCCC-EEEEECCCCCC-CCCCCHHHHHHHCCCEEEEECCCC----CCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCH
T ss_conf 20577-17997131156-889986679997197799815657----6778889988545870589995036661464559
Q ss_pred CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 33321112233333201110122110000012233222111233322574146544322344544422110122687531
Q gi|254780602|r 184 NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 184 ~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
+ +++++ ++++++.++.|.+=..++-............ --++++|--|.++ |-|-|.+++.+++++.+.+
T Consensus 177 ~---~l~~i-a~~~~lpvivD~aSg~~v~~e~~l~~~la~G-----aDLV~~SgdKllg--GPqaGii~GkKelI~~lq~ 245 (395)
T COG1921 177 E---ELVEI-AHEKGLPVIVDLASGALVDKEPDLREALALG-----ADLVSFSGDKLLG--GPQAGIIVGKKELIEKLQS 245 (395)
T ss_pred H---HHHHH-HHHCCCCEEEECCCCCCCCCCCCHHHHHHCC-----CCEEEEECCHHCC--CCCCCEEECHHHHHHHHHH
T ss_conf 9---99999-9876997799667763003554456888607-----9789975401127--9854337424999999976
Q ss_pred HCCCCCCCCCCCCCCCCCCCC
Q ss_conf 001222332222222222223
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEAL 284 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l 284 (400)
..-....-+..+.-.+...+|
T Consensus 246 ~~l~Ralrv~K~tla~l~~aL 266 (395)
T COG1921 246 HPLKRALRVDKETLAALEAAL 266 (395)
T ss_pred HHHHHHHHCCCHHHHHHHHHH
T ss_conf 213343315827689999999
No 309
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.74 E-value=8.8e-08 Score=67.45 Aligned_cols=358 Identities=15% Similarity=0.189 Sum_probs=201.5
Q ss_pred HHHHHHHHHHCCCCEEECCCCCC--CCCCC---HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999999986997266565897--49889---99999999998388756998778989999999986421013333223
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEP--DFDMP---ENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQ 93 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p--~~~~p---~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~ 93 (400)
..++-+.++++|.+..-|..++. |+-+. -.+.+..--++-.|.-.|+.+.+...|++++-+.+ |. +.
T Consensus 25 re~RE~al~~ag~N~F~l~Sedv~IDLLTDSGTgams~~qwaamm~GDEAYagsrs~~~L~~avkdif----Gf----q~ 96 (471)
T COG3033 25 REYREEALKKAGYNPFLLDSEDVFIDLLTDSGTGAMTDKQWAAMMRGDEAYAGSRSYYALADAVKDIF----GF----QY 96 (471)
T ss_pred HHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHC----CC----EE
T ss_conf 99999999976998055155645788530588662538999988525354315533899999999861----73----46
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC-----CCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCC------C--CCHHHHHHC
Q ss_conf 32334543333222222233223-----222233-332322222222222222222222232------2--210333100
Q gi|254780602|r 94 IIVGTGAKHVIFNALMATVNMGD-----EVLIPR-PYWVSYPDMVALCGGIPVFVDTQQDDN------F--QVSPEKLEQ 159 (400)
Q Consensus 94 I~it~G~~~~l~~~~~~~~~~Gd-----~Vlv~~-P~y~~y~~~~~~~g~~~~~v~~~~~~~------~--~~d~~~l~~ 159 (400)
++.|+-+..|=...+..+..+|+ ...+++ -.|..-+...+..|+.++-++.++..+ | .+|++.|++
T Consensus 97 ~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~ 176 (471)
T COG3033 97 TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLER 176 (471)
T ss_pred EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
T ss_conf 51255773177788999841032067741012345312022677875487021231665566455688778657999999
Q ss_pred CCCC----CCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-C---CCC---CCCCCCCCCCCCCCC
Q ss_conf 0122----122012113542-100001233332111223333320111012211-0---000---012233222111233
Q gi|254780602|r 160 AITP----KTKWLFLNSPSN-PSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-H---IVY---RNCQFSNIVNVEPSL 227 (400)
Q Consensus 160 ~i~~----~~k~i~l~nP~N-PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~---l~~---~~~~~~s~~~~~~~~ 227 (400)
+|.+ +.-.|+++--+| -.|+-.|-+.++++.++ ++++++.++.|.+-. + |+- .+.+.-|+..+..++
T Consensus 177 lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~i-a~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm 255 (471)
T COG3033 177 LIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEI-AKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREM 255 (471)
T ss_pred HHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHH-HHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 99873714586899999626667871207769999999-98719958964456654202234247655546099999999
Q ss_pred CCEE-EEECCCCCCCCCCCCCC-CCCCCHHH----HHHHHHHHCCCCCCCCCCCCCC------CCCCCCCCC--CCCCCC
Q ss_conf 3225-74146544322344544-42211012----2687531001222332222222------222223467--643222
Q gi|254780602|r 228 YERT-LVVNGVSKAYAMTGLRI-GYAAGALS----LIKSMIVLQGQQTSGACSIAQW------AAVEALNGP--QDFVVN 293 (400)
Q Consensus 228 ~~~~-i~~~S~SK~~~~~G~Ri-G~~v~~~~----li~~l~~~~~~~~~~~~~~~q~------a~~~~l~~~--~~~~~~ 293 (400)
.+.. -..-|.-|.--++ + |++....+ +-..+..+. ...-+.++.... +.+..|.+. .+|+..
T Consensus 256 ~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~-V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~ 331 (471)
T COG3033 256 YSYADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLV-VVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAH 331 (471)
T ss_pred HHHHHHHEEECCCCCEEC---CCCEEEECCCCHHHHHHHHHHHE-EEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 865124302025452422---46578864750778999987665-75126666576442328999978887427089999
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC--CCCC-
Q ss_conf 2221100000002455304776033027408998626410233211332248989999999987397998350--2289-
Q gi|254780602|r 294 NRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGS--SFGH- 370 (400)
Q Consensus 294 ~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~--~Fg~- 370 (400)
.. .+.+++.+.|.+. |+.+..|-||--+|+|..++.. +.+.. ......|+..|..+.||-.+--- .||.
T Consensus 332 Rv----~Qv~YL~~~l~~~-GVpi~~paGGHavfvda~~~lp-hip~e--qFpaqala~ely~e~GiRavElG~~~~~rd 403 (471)
T COG3033 332 RV----AQVQYLADGLEEA-GVPIVQPAGGHAVFVDAGKFLP-HIPAE--QFPAQALACELYKEAGIRAVELGSFSLGRD 403 (471)
T ss_pred HH----HHHHHHHHHHHHC-CCEEEECCCCCEEEEEHHHHCC-CCCHH--HCCHHHHHHHHHHHHCEEEEEEECEECCCC
T ss_conf 99----9999999888865-9736852787169963456367-78824--484778999999983823664201111558
Q ss_pred -C---------CEEEEEEE------CCHHHHHHHHHHHHHHHH
Q ss_conf -9---------72899962------999999999999999998
Q gi|254780602|r 371 -G---------PSIRISYA------VSDAILEEACVRIKRFCH 397 (400)
Q Consensus 371 -~---------~~iRis~~------~~~e~l~~al~rl~~~l~ 397 (400)
+ .-+|+++- ...+-+.+++.++++--+
T Consensus 404 ~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~ 446 (471)
T COG3033 404 PKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAE 446 (471)
T ss_pred CCCCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 7764347871230467435111456679999999999985424
No 310
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=98.72 E-value=4.5e-08 Score=69.24 Aligned_cols=337 Identities=15% Similarity=0.142 Sum_probs=181.0
Q ss_pred CCCCEEECCCCCCCCC---CCHHHHHHHHHHHHC-CCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 6997266565897498---899999999999838-875---699877898999999998642101333322332334543
Q gi|254780602|r 29 KGIDVLCLTAGEPDFD---MPENVKYAVVRAMER-GET---KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 29 ~g~~ii~l~~G~p~~~---~p~~i~~a~~~al~~-~~~---~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~ 101 (400)
+|+.-+||=.|..-+. -.|.|++|+++-++. +.+ -|-+..| ..++++.+.+|-. -+.|++-|-+.
T Consensus 40 eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~KlTL~Sraf~nd~lg------~~~~~~t~LfgGk--~~~vL~mNTGa 111 (426)
T TIGR01885 40 EGREYLDFLSAYSAVNQGHCHPKIVNALKNQADKLTLTSRAFHNDVLG------EFAKYLTKLFGGK--YEKVLPMNTGA 111 (426)
T ss_pred CCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCHHH------HHHHHHHHHCCCC--CCEEECCCCCH
T ss_conf 888864100255440137677168999999985137102766060357------8999999754995--10560456873
Q ss_pred CCCCCCCCCC-----CC---CCC--CCCCCCCCCCC-CCCCC---CCC-CCCCCCCCCCC----CCCCCC----HHHHHH
Q ss_conf 3332222222-----33---223--22223333232-22222---222-22222222222----232221----033310
Q gi|254780602|r 102 HVIFNALMAT-----VN---MGD--EVLIPRPYWVS-YPDMV---ALC-GGIPVFVDTQQ----DDNFQV----SPEKLE 158 (400)
Q Consensus 102 ~~l~~~~~~~-----~~---~Gd--~Vlv~~P~y~~-y~~~~---~~~-g~~~~~v~~~~----~~~~~~----d~~~l~ 158 (400)
+|-..++..- .. |.+ +||...=.|.. -..++ .-. -.+--+-|+-+ .++|.. |+|+|+
T Consensus 112 EAvEtA~KLAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~~iPYgd~EAl~ 191 (426)
T TIGR01885 112 EAVETALKLARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFRKIPYGDLEALR 191 (426)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 47999999999744135785576238998538873303544320267212006787967743357852115588878999
Q ss_pred CCCC-C-----CCCCEEECCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCC--CCCCC
Q ss_conf 0012-2-----1220121135-42100001233-3321112233333201110122110000012233-2221--11233
Q gi|254780602|r 159 QAIT-P-----KTKWLFLNSP-SNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFS-NIVN--VEPSL 227 (400)
Q Consensus 159 ~~i~-~-----~~k~i~l~nP-~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~-s~~~--~~~~~ 227 (400)
++++ + ++-|++| =| +==.|.|.+++ -+.++.++| ++|++++|.||+=-.|.=.|+-+. .... +.||
T Consensus 192 ~aL~~P~~~GDnVAA~i~-EPIQGEAGvvvPp~gYl~~V~~LC-~~~nVLfI~DEiQTGlGRTGk~la~dh~~aev~PD- 268 (426)
T TIGR01885 192 KALQDPKKTGDNVAAFIL-EPIQGEAGVVVPPPGYLPGVRALC-KEHNVLFIADEIQTGLGRTGKLLACDHENAEVKPD- 268 (426)
T ss_pred HHHHCCCCCCCCEEEEEE-CCCCCCCCEEECCCCHHHHHHHHH-HHCCCEEEEEEECCCCCHHHHHHHHHCCCCEECCC-
T ss_conf 997275778886899995-040354436848963578999986-55187289820003840254533101058820450-
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 3225741465443223445444221101226875310--01222332222222222223467643222222110000000
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVL--QGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLC 305 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~ 305 (400)
|++ +.|.++-.=+-|+.++++.|++.-+..= ...+++|-+++.-++++++|+--++ +++.+.-.+.-+.+
T Consensus 269 ----i~l--LGKALsGGv~PiSa~la~~dim~vl~PGPF~HGSTfGGNPLAcavaiAaLeVL~~--ekL~~~A~~lG~~f 340 (426)
T TIGR01885 269 ----IVL--LGKALSGGVYPISAVLADDDIMSVLKPGPFEHGSTFGGNPLACAVAIAALEVLEE--EKLAERADQLGDMF 340 (426)
T ss_pred ----CEE--EEHHHCCCCCCEEEEEECCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHH
T ss_conf ----335--1123458946224366646401211764865677688757899999999998740--45068898832899
Q ss_pred HHHHHCCC----CCEEEECCC-CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 24553047----760330274-0899862641023321133224898999999998739799835022899728999--6
Q gi|254780602|r 306 VAQLQGVP----GIRYMIPDG-AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 306 ~~~L~~~~----g~~~~~p~g-~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
.+.|+++. ++ +..-.| |+++=+.+.+.. ....+.++.|.+| ++.|++.-|-. .+.-|||+ +
T Consensus 341 ~~~L~~l~~~S~dv-v~EVRGkGLL~AIe~~~~k-------a~~~~~w~~Cl~~-k~~GLlak~~n---hd~~IR~aPPL 408 (426)
T TIGR01885 341 LDELKQLARESPDV-VKEVRGKGLLIAIEFKENK-------ADEIGAWDVCLRL-KENGLLAKPTN---HDKIIRLAPPL 408 (426)
T ss_pred HHHHHHHHHHCCCC-EEHHCCCCCEEEEEEECCC-------CCCCCHHHHHHHH-HCCCCEECCCC---CCCEEEECCCC
T ss_conf 99999887507640-0011567216888850653-------3326466887885-20742101335---87068717885
Q ss_pred ECCHHHHHHHHHHHHHHH
Q ss_conf 299999999999999999
Q gi|254780602|r 379 AVSDAILEEACVRIKRFC 396 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l 396 (400)
..++|+|+++++.|++.+
T Consensus 409 ~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 409 VITKEQLDEVIEIIRKTL 426 (426)
T ss_pred CCCHHHHHHHHHHHHHCC
T ss_conf 263899999999986049
No 311
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.71 E-value=3.4e-08 Score=69.93 Aligned_cols=151 Identities=18% Similarity=0.216 Sum_probs=85.9
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC---------CHHHHHHCCCCC
Q ss_conf 3233454333322222223322322223333232222-222222222222222223222---------103331000122
Q gi|254780602|r 94 IIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPD-MVALCGGIPVFVDTQQDDNFQ---------VSPEKLEQAITP 163 (400)
Q Consensus 94 I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~v~~~~~~~~~---------~d~~~l~~~i~~ 163 (400)
-+++||++.++..+++++|.|||.||++.=+--...+ ++.+.|++|++++...+ .|. ++.+.+.+.|.+
T Consensus 193 yFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~GALIlsGA~PVYl~p~rN-~~GiiggI~~~~f~~~~i~~~I~~ 271 (720)
T PRK13578 193 YFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARN-PFGFIGGIDAHCFDEEYLREQIRE 271 (720)
T ss_pred EEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCC-CCCEECCCCHHHCCHHHHHHHHHH
T ss_conf 9995771088999999745899999965643577777889866976799666467-565116748575275778988874
Q ss_pred ---------CC-CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CCCCCC--CCCCC-CCCCCCCCC
Q ss_conf ---------12-20121135421000012333321112233333201110122110-000012--23322-211123332
Q gi|254780602|r 164 ---------KT-KWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEH-IVYRNC--QFSNI-VNVEPSLYE 229 (400)
Q Consensus 164 ---------~~-k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~-l~~~~~--~~~s~-~~~~~~~~~ 229 (400)
++ ++.++++| +=-|.+|+.+++. +.+.+. ...|+.||||.. ..|..- ...++ ..+.++. .
T Consensus 272 ~~~~~a~~~~p~~~aVit~~-TYdGi~yn~~~I~---~~i~~~-~~~ilfDEAw~~~~~F~P~~~d~~p~~l~~gadd-p 345 (720)
T PRK13578 272 VAPERADEARPFRLAIIQLG-TYDGTIYNARQVV---DKIGHL-CDYILFDSAWVGYEQFIPMMADCSPLLLELNEND-P 345 (720)
T ss_pred HCHHHHCCCCCCEEEEEECC-CCCCEEECHHHHH---HHHHHH-CCEEEEECCHHHHHHCCCCCCCCCCCCCCCCCCC-C
T ss_conf 36333123488618999468-7535423499999---998640-7838985110214432853112464333458777-6
Q ss_pred EEEEECCCCCCCCCCCCCCC-CCCC
Q ss_conf 25741465443223445444-2211
Q gi|254780602|r 230 RTLVVNGVSKAYAMTGLRIG-YAAG 253 (400)
Q Consensus 230 ~~i~~~S~SK~~~~~G~RiG-~~v~ 253 (400)
.++++.|..|.. +|+--+ ++..
T Consensus 346 ~i~vtQStHK~L--aafSQaS~IHv 368 (720)
T PRK13578 346 GIFVTQSVHKQQ--AGFSQTSQIHK 368 (720)
T ss_pred CEEEEEEHHHHH--HHHCHHHEEEE
T ss_conf 504663065554--43222210122
No 312
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=98.69 E-value=1.2e-07 Score=66.71 Aligned_cols=321 Identities=14% Similarity=0.153 Sum_probs=187.5
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCCCCC--CCHHHHHHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 98899999999999838875699877--8989999999986421013333-22332334543333222222233-22322
Q gi|254780602|r 43 FDMPENVKYAVVRAMERGETKYTAVA--GISPLREAIVEKFRRDNDLHYT-SDQIIVGTGAKHVIFNALMATVN-MGDEV 118 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~~~~~~Y~~~~--G~~~lR~aia~~~~~~~g~~~~-~e~I~it~G~~~~l~~~~~~~~~-~Gd~V 118 (400)
+-+...+++||.. -|+... -...+-+.|+..+-+.-+-+-+ ---|++--.++-+...++=..+. +.++|
T Consensus 12 LtTs~~vk~aMl~-------D~CtWD~dYn~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~~pr~~~kl 84 (366)
T TIGR02326 12 LTTSKTVKEAMLV-------DWCTWDSDYNEDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSAVPRKDGKL 84 (366)
T ss_pred CCHHHHHHHHHHC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 6300688886621-------045871553136799999999998606898546786127512555665411247889738
Q ss_pred CCCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC--CCEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2233-33232-22222222222222222222322210333100012212--20121135421000012333321112233
Q gi|254780602|r 119 LIPR-PYWVS-YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKT--KWLFLNSPSNPSGVVYSQNRLRALADVLV 194 (400)
Q Consensus 119 lv~~-P~y~~-y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~--k~i~l~nP~NPTG~v~s~~~l~~i~~~~a 194 (400)
||.. =.|.. -..+++.++...+.+...|.. .+++.++++.++..+ .-|-+++----||..=|-+ +++.+ +
T Consensus 85 Lv~~NGAYG~R~~~ia~~l~i~~~~~~~~E~~--~~~~~~ve~~L~~dp~ItH~A~vHcETtTGiLNPi~---~~~~~-~ 158 (366)
T TIGR02326 85 LVVINGAYGKRIAQIAEYLQIPHHVVETEENE--PTNVVEVEAILAADPAITHVALVHCETTTGILNPIE---AVAKV-A 158 (366)
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEECCCCC--CCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHH---HHHHH-H
T ss_conf 99717853478999999847861675158777--778899999985189712788983675266211289---99999-9
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC-CCCCCCCCCCCCCHHHHHHH-------------
Q ss_conf 3332011101221100000122332221112333225741465443-22344544422110122687-------------
Q gi|254780602|r 195 RNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA-YAMTGLRIGYAAGALSLIKS------------- 260 (400)
Q Consensus 195 ~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~-~~~~G~RiG~~v~~~~li~~------------- 260 (400)
++|+..+|.|.- + .|++-+ .++..+.- -..+.|..|- -|+|| .||+++-..-+++
T Consensus 159 ~~hGk~~ivDAM-S--SfGgi~-idi~~l~~-----D~LIssanKCi~GVPG--fgFviA~~~~L~~~~g~arSLsLDLy 227 (366)
T TIGR02326 159 KRHGKVTIVDAM-S--SFGGIP-IDIAELDI-----DYLISSANKCIQGVPG--FGFVIAKQAELEKCAGNARSLSLDLY 227 (366)
T ss_pred HHCCCEEEEECC-C--CCCCCH-HHHHHHCC-----CEEEECCCCCCCCCCC--HHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_conf 855977998534-1--137600-11643256-----7635234781337684--36677689999862043210235489
Q ss_pred --HHHHC---CCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCC
Q ss_conf --53100---1222332222222222223467--6432222221100000002455304776033027408998626410
Q gi|254780602|r 261 --MIVLQ---GQQTSGACSIAQWAAVEALNGP--QDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDL 333 (400)
Q Consensus 261 --l~~~~---~~~~~~~~~~~q~a~~~~l~~~--~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~ 333 (400)
...+. ..--+.+|+..-.|..+||.+. |.-+....++|+.+.+.|.+.|+++ |++...++. +..+
T Consensus 228 dQw~~M~~~~GkWRFTsPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~~m~~L-GF~~ll~~~-------~~sP 299 (366)
T TIGR02326 228 DQWECMEKQHGKWRFTSPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVAGMRAL-GFEPLLDDE-------LQSP 299 (366)
T ss_pred HHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHC-CCCCCCCHH-------HCCC
T ss_conf 99999644899622177268999999999999845897457899999999999999861-551147543-------4588
Q ss_pred CCCCCCCCC-CCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE-EE-CCHHHHHHHHHHHHHHHH
Q ss_conf 233211332-24898999999998739799835022899728999-62-999999999999999998
Q gi|254780602|r 334 IGKKSPSGD-VIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS-YA-VSDAILEEACVRIKRFCH 397 (400)
Q Consensus 334 ~~~~~~~~~-~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis-~~-~~~e~l~~al~rl~~~l~ 397 (400)
......... ...+=.+|..+| +++|=.+.||.-=. -..+||. +| ...+++++.+..|++++.
T Consensus 300 IItsF~~P~~~~y~F~~fY~~l-k~~GFviYPGKvs~-~~~FRiG~IG~V~~~di~~l~~~I~~~~~ 364 (366)
T TIGR02326 300 IITSFYSPEDPDYRFADFYQRL-KEQGFVIYPGKVSQ-VDTFRIGNIGDVDAADIERLVTAIGKALY 364 (366)
T ss_pred EEEEEECCCCCCCHHHHHHHHH-HHCCCEECCCCCCC-CCCEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6898507788971389999999-76781762761045-66211167676388999999999998750
No 313
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=98.67 E-value=6.2e-08 Score=68.36 Aligned_cols=346 Identities=15% Similarity=0.147 Sum_probs=184.3
Q ss_pred CCCCEEECCCCC--CCC-CCCHHHHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 699726656589--749-8899999999999838-875699877898999999998642101333322332334543333
Q gi|254780602|r 29 KGIDVLCLTAGE--PDF-DMPENVKYAVVRAMER-GETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVI 104 (400)
Q Consensus 29 ~g~~ii~l~~G~--p~~-~~p~~i~~a~~~al~~-~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l 104 (400)
+|+..|||+.|= -+. .-+|.+++|+++-+.+ ..+.|.=.. ++.+- ++|+.+++---.+=...-|++++|+ +|.
T Consensus 31 dGnr~IDfa~gIavln~GhshP~vV~AV~~Q~~ef~Ht~f~v~p-Ye~Yv-~lAEkln~iaPgSg~kk~~ffnsGA-EAV 107 (427)
T TIGR00700 31 DGNRYIDFAAGIAVLNVGHSHPKVVEAVKRQVEEFTHTAFQVVP-YESYV-ELAEKLNAIAPGSGEKKAVFFNSGA-EAV 107 (427)
T ss_pred CCCEEEHHCCCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEC-CHHHH-HHHHHHCCCCCCCCCHHEEEECCCH-HHH
T ss_conf 77521000110232036898735899999999974388534521-62589-9999971578897310002111543-788
Q ss_pred CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------------CCCCCCCCC---------CCCCC-CHHHHH
Q ss_conf 2222---22233223222233332322222222222--------------222222222---------23222-103331
Q gi|254780602|r 105 FNAL---MATVNMGDEVLIPRPYWVSYPDMVALCGG--------------IPVFVDTQQ---------DDNFQ-VSPEKL 157 (400)
Q Consensus 105 ~~~~---~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~--------------~~~~v~~~~---------~~~~~-~d~~~l 157 (400)
..+. +..+.+ .-|+-.+-.|-.=..+...+=. .++.+|... +..+. +.+.++
T Consensus 108 ENAVKIAR~yTgr-pgVvaF~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~~~~~~~q~s~d~m~~~A~ 186 (427)
T TIGR00700 108 ENAVKIARKYTGR-PGVVAFDRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYRDIALDKQESLDDMVLAAI 186 (427)
T ss_pred HHHHHHHHHHCCC-CCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 8899999874589-616863687466126788765227873457888674521168872002433442222003899999
Q ss_pred HCC------CCCCCCCEEECCC-CCCCCCCCC-CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCC----CCCCCCCCC
Q ss_conf 000------1221220121135-421000012-3333211122333332011101221100000122----332221112
Q gi|254780602|r 158 EQA------ITPKTKWLFLNSP-SNPSGVVYS-QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQ----FSNIVNVEP 225 (400)
Q Consensus 158 ~~~------i~~~~k~i~l~nP-~NPTG~v~s-~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~----~~s~~~~~~ 225 (400)
++. |.+++-+-++.-| +==-|-+.+ ++.+.+|.+|| ++|+|..|.||+-..|.=.|.- |...-.+.|
T Consensus 187 ~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C-~ehgiVfiADEvQtGFARTG~~FA~eH~~~dGl~P 265 (427)
T TIGR00700 187 EALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLC-KEHGIVFIADEVQTGFARTGKLFAIEHYDDDGLKP 265 (427)
T ss_pred HHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH-HHCCEEEEECCCCCCCCHHCCCEEEEECCCCCCCC
T ss_conf 98312103325010437897322478873338588999999975-43875899725456800002112541006788875
Q ss_pred CCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC
Q ss_conf 3332257414654432234454442211012268753100122233222222222222346--76432222221100000
Q gi|254780602|r 226 SLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRD 303 (400)
Q Consensus 226 ~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~ 303 (400)
| + -+.||+++ .|+-+.-+++..+++++-.-=-=-.+++-+++...|+.+.|+- .+...|+-++.-+.-.|
T Consensus 266 D-----L--it~aKslA-~GlPLSgV~GrAeimdApapGgLGGTyaGnPlacAAAlAvl~iIe~egL~ERa~qig~~~~d 337 (427)
T TIGR00700 266 D-----L--ITVAKSLA-DGLPLSGVVGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLDIIEEEGLIERAEQIGKLVKD 337 (427)
T ss_pred C-----H--HHHHHHHH-CCCCCCHHHCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
T ss_conf 1-----8--87866773-56862111044121168888888775568879999999999863113124789998788988
Q ss_pred CHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHCCEEEECCCCCCCCCEEEEE--E
Q ss_conf 002455304776033027408998626410233211332248989999999---98739799835022899728999--6
Q gi|254780602|r 304 LCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGL---LEIEKVAVVQGSSFGHGPSIRIS--Y 378 (400)
Q Consensus 304 ~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---l~~~gV~v~pG~~Fg~~~~iRis--~ 378 (400)
.+++.=+..|-+--++--|+|-. +.+-+-..+ ...|...++++ ..+.||++..+-.|| |=||+= +
T Consensus 338 ~l~~~k~~~p~IgdvRglGaMiA-vE~vkdp~T-------~EPda~~a~~ia~~A~a~GlllLTcG~~G--NiIRfL~PL 407 (427)
T TIGR00700 338 KLIELKEEVPAIGDVRGLGAMIA-VELVKDPDT-------TEPDAALAEKIAAAALAAGLLLLTCGIYG--NIIRFLTPL 407 (427)
T ss_pred HHHHHHHHCCCHHHHHCCCCEEE-EEEECCCCC-------CCCCHHHHHHHHHHHHHCCHHHHHCCHHC--CHHHHCCCC
T ss_conf 88888760672111202633578-886548878-------88317999999999975682212303011--555434886
Q ss_pred ECCHHHHHHHHHHHHHHHH
Q ss_conf 2999999999999999998
Q gi|254780602|r 379 AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 379 ~~~~e~l~~al~rl~~~l~ 397 (400)
+.+++.|.+||+.|.+.|.
T Consensus 408 tI~D~ll~egl~Il~a~L~ 426 (427)
T TIGR00700 408 TISDELLDEGLDILEAALA 426 (427)
T ss_pred CCCHHHHHHHHHHHHHHHC
T ss_conf 5467889889999999852
No 314
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=98.66 E-value=2.1e-08 Score=71.29 Aligned_cols=179 Identities=19% Similarity=0.339 Sum_probs=122.8
Q ss_pred HHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----C
Q ss_conf 838875699877898999999998642101333322332334543333222222233223222233332322222----2
Q gi|254780602|r 57 MERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDM----V 132 (400)
Q Consensus 57 l~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~----~ 132 (400)
-+++.+-|+- +|.+ ...|+++-+...-| .-++.+-+.+..|+...+++++..||+||+.+=.|.+-+.. .
T Consensus 42 ~~~~~ltYG~-rGt~-T~~ALq~a~~elEG----~ag~~lyPsGlAAvT~~~LafvkaGDhvL~vdsaY~PTr~Fcd~vL 115 (389)
T TIGR01324 42 RAKDKLTYGI-RGTL-TTVALQDALAELEG----AAGVILYPSGLAAVTNALLAFVKAGDHVLVVDSAYKPTRRFCDIVL 115 (389)
T ss_pred CCCCCEECCC-CCCC-HHHHHHHHHHHHCC----CCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
T ss_conf 1277410134-6875-38899999997247----7760762475578889999887438837986464611589998875
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC--CCCCEEECCCCCC-C
Q ss_conf 222222222222222322210333100012212201211354210000123333211122333--3320111012211-0
Q gi|254780602|r 133 ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVR--NPHVHIISDDIYE-H 209 (400)
Q Consensus 133 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~--~~~i~ii~De~Y~-~ 209 (400)
+..|.++.||+-. +.+++|..+|+++||+|++-.| ...++.-.++=+|++. |+ +.++.|+.|..++ .
T Consensus 116 kr~gv~~~YYDP~------igPe~ia~Li~pnTkv~flEaP---~S~TfE~qDIPaIaka-A~kv~~g~~~miDNTWaag 185 (389)
T TIGR01324 116 KRLGVEVEYYDPK------IGPEDIAALIKPNTKVVFLEAP---ASLTFEVQDIPAIAKA-ARKVAAGVVVMIDNTWAAG 185 (389)
T ss_pred HHHCEEEEEECCC------CCHHHHHHHCCCCCEEEEEECC---CCCEECCCCHHHHHHH-HHHCCCCEEEEEECCCCCH
T ss_conf 3634458872788------6888898740888448998378---7451035884689999-8641898299963630200
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHH
Q ss_conf 000012233222111233322574146544322-34454442211012268753
Q gi|254780602|r 210 IVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA-MTGLRIGYAAGALSLIKSMI 262 (400)
Q Consensus 210 l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG~~v~~~~li~~l~ 262 (400)
+.|.. ++ .+..|.+...+|..+ -.-.=+|-++++++-.+++.
T Consensus 186 llFkp--------L~---HgvdiSiqA~TKY~~GHSD~~~Gtv~an~~~w~qL~ 228 (389)
T TIGR01324 186 LLFKP--------LE---HGVDISIQAATKYLAGHSDVLLGTVAANEDAWEQLL 228 (389)
T ss_pred HHCCC--------CC---CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 10230--------01---786368750335575500245634775578998751
No 315
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=98.64 E-value=1.4e-08 Score=72.24 Aligned_cols=198 Identities=19% Similarity=0.308 Sum_probs=134.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCC----CCCCCCCCCCCCCCC----
Q ss_conf 569987789899999999864210133332233233454333322222--2233223----222233332322222----
Q gi|254780602|r 62 TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALM--ATVNMGD----EVLIPRPYWVSYPDM---- 131 (400)
Q Consensus 62 ~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~--~~~~~Gd----~Vlv~~P~y~~y~~~---- 131 (400)
+-|+-+ |.| .|.+|-..+.+..+. ..++++..+.+..||..+.+ .++++|| +||-.+=-|..-..+
T Consensus 41 YDYsRS-GNP-TR~~Le~~~AkL~~a--Pq~~al~~sSGMaAL~~~~~Glv~L~~GdnhtP~i~AgdDlYGG~~RLL~~~ 116 (415)
T TIGR01329 41 YDYSRS-GNP-TRTALESLLAKLEKA--PQERALAVSSGMAALDVITRGLVLLNAGDNHTPEIIAGDDLYGGTDRLLTQL 116 (415)
T ss_pred CCCCCC-CCH-HHHHHHHHHHHHHCC--CCCCEEEEECCHHHHHHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHH
T ss_conf 773468-980-478999998865127--5353588861367998864114566078886770784374565047899997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC--CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC--CEEECCCCC
Q ss_conf 2222222222222222322210333100012--212201211354210000123333211122333332--011101221
Q gi|254780602|r 132 VALCGGIPVFVDTQQDDNFQVSPEKLEQAIT--PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPH--VHIISDDIY 207 (400)
Q Consensus 132 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~--~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~--i~ii~De~Y 207 (400)
....|..+++|++. |+|++++++. |++++++|=+|-||.-.+.+ +.+|++. ++.++ ..|+.|..-
T Consensus 117 ~~~~G~vv~~V~t~-------~~d~v~~~l~~~P~~~lv~LESPTNPl~~ivD---I~~i~~~-ah~~~~~~~V~vDNtm 185 (415)
T TIGR01329 117 ASRSGVVVVHVDTT-------DLDKVKAVLGDLPKTKLVLLESPTNPLIKIVD---IRKIAEA-AHALNEDALVVVDNTM 185 (415)
T ss_pred HHCCCEEEEECCCC-------CHHHHHHHHHCCCHHEEEEECCCCCCCCEEEC---HHHHHHH-HHHCCCCCEEEEECCC
T ss_conf 43285289974898-------87999998606871207650388898624633---7899999-9850897189982220
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC---CCCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 100000122332221112333225741465443223445---4442211-012268753100122233222222222222
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL---RIGYAAG-ALSLIKSMIVLQGQQTSGACSIAQWAAVEA 283 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~---RiG~~v~-~~~li~~l~~~~~~~~~~~~~~~q~a~~~~ 283 (400)
.-+-.. ..+.+.|++ -|++.|.+|.++ |- =.|.++. .+++.+++.-++....++.+++--|..++.
T Consensus 186 ----mSPl~c-~PL~LnPGa---D~v~~SATKfL~--GH~D~MaGvl~~k~e~~~~~~yF~~Ns~G~gLaP~DswLLlRG 255 (415)
T TIGR01329 186 ----MSPLLC-NPLELNPGA---DIVYESATKFLA--GHSDVMAGVLAVKSEEIAKKVYFLINSTGAGLAPFDSWLLLRG 255 (415)
T ss_pred ----CCCCCC-CCCCCCCCC---CEEECCCCCCCC--CCCCCCCCEEEECCHHHHHHEEEEECCCCCCCCHHHHHHHHHH
T ss_conf ----476678-875667897---578635342014--6401133557773712100011123366776651358999866
Q ss_pred C
Q ss_conf 3
Q gi|254780602|r 284 L 284 (400)
Q Consensus 284 l 284 (400)
+
T Consensus 256 i 256 (415)
T TIGR01329 256 I 256 (415)
T ss_pred H
T ss_conf 8
No 316
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.52 E-value=3.4e-08 Score=69.99 Aligned_cols=194 Identities=18% Similarity=0.276 Sum_probs=120.8
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--C
Q ss_conf 72665658974988999999999998388756998---778989999999986421013333223323345433332--2
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF--N 106 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~--~ 106 (400)
-+|+|+.=-|.+.+--..+-+-..-+ ...+-|.| .+|..++-..+.+|+..-.|.+ .=.+=.-+|++.-.. +
T Consensus 67 ~m~PLGSCTMK~Np~~e~~~~~~p~f-~~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG~D--avsLQP~AGAqGE~aGll 143 (496)
T COG1003 67 GMIPLGSCTMKLNPKAEMKPATWPEF-ANIHPFQPEEQVQGYLELIYELQEWLKEITGMD--AVSLQPNAGAQGEYAGLL 143 (496)
T ss_pred CCCCCCCCCCCCCCHHHCCCCCCCCH-HHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC--EEECCCCCCCCHHHHHHH
T ss_conf 76177645215584121122246004-424999986888999999999999999740976--264067877641567899
Q ss_pred CCCCC-CCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 22222-3322----322223333232222222222222222222223222103331000122122012113542100001
Q gi|254780602|r 107 ALMAT-VNMG----DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVY 181 (400)
Q Consensus 107 ~~~~~-~~~G----d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~ 181 (400)
+++.. -+.| +.+|+|+-.-......+.++|.+++.|+++++++ +|+|+|++++.+++.+++++||| -.| ++
T Consensus 144 ~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~G~--VDlddLk~k~~~~~AalMiTnPs-T~G-vF 219 (496)
T COG1003 144 AIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDENGN--VDLDDLRAKAEDNLAALMITNPS-TLG-VF 219 (496)
T ss_pred HHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCCCC--CCHHHHHHHHCCCEEEEEECCCC-CCC-CC
T ss_conf 999999975887776798316556898656765485599983289887--16999998741311588861686-454-50
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CC-CCCEEEEECCCCCCCCCC
Q ss_conf 2333321112233333201110122110000012233222111-23-332257414654432234
Q gi|254780602|r 182 SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PS-LYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 182 s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~-~~~~~i~~~S~SK~~~~~ 244 (400)
.+.+++|+++. .+++-.+ .|||.....+..+. |+ +.-.+.+++ +.|+|+.|
T Consensus 220 -E~~I~ei~~iv-H~~Gg~v---------Y~DGANlNA~vG~~rPGd~G~DV~HlN-LHKTF~iP 272 (496)
T COG1003 220 -EEDIREICEIV-HEAGGQV---------YYDGANLNAIVGLARPGDMGFDVVHLN-LHKTFCIP 272 (496)
T ss_pred -HHHHHHHHHHH-HHCCCEE---------EECCCCHHHHHCCCCCCCCCCCEEEEE-CCCCCCCC
T ss_conf -45199999999-9729989---------844754352522556655656357752-23110258
No 317
>KOG1401 consensus
Probab=98.50 E-value=5e-07 Score=62.88 Aligned_cols=344 Identities=14% Similarity=0.099 Sum_probs=175.5
Q ss_pred HCCCCEEECC----CCCCCCCCCHHHHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 8699726656----58974988999999999998388---7569987789899999999864210133332233233454
Q gi|254780602|r 28 SKGIDVLCLT----AGEPDFDMPENVKYAVVRAMERG---ETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGA 100 (400)
Q Consensus 28 ~~g~~ii~l~----~G~p~~~~p~~i~~a~~~al~~~---~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~ 100 (400)
..|++.||+. .+-++.. -|++.+++.+....- .++|..-. .-+|-+.+.+.. +- -+++.|.+.|.+
T Consensus 53 ~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~----~~-~~~~rvff~nsG 125 (433)
T KOG1401 53 PDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVL----GK-GSAERVFFCNSG 125 (433)
T ss_pred CCCCEEEEECCCHHCCCCCCC-CHHHHHHHHHHHHHHEEECCCCCCHH-HHHHHHHHHHCC----CC-CCCCEEEEECCC
T ss_conf 886644130011001355889-98999999998755344047532088-899999997423----56-874179995697
Q ss_pred CCCCCCCCCCC----C--CCCCC--CCCCCCCCCCCC-CCCCCCCCCCCCCCCC---CCCCCC--CHHHHHHCCCCCCC-
Q ss_conf 33332222222----3--32232--222333323222-2222222222222222---223222--10333100012212-
Q gi|254780602|r 101 KHVIFNALMAT----V--NMGDE--VLIPRPYWVSYP-DMVALCGGIPVFVDTQ---QDDNFQ--VSPEKLEQAITPKT- 165 (400)
Q Consensus 101 ~~~l~~~~~~~----~--~~Gd~--Vlv~~P~y~~y~-~~~~~~g~~~~~v~~~---~~~~~~--~d~~~l~~~i~~~~- 165 (400)
++|...++..- + .+-++ +|...=+|-... .....++...+..|.+ ++-.+. -|..++++.++.+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~e~~~~ 205 (433)
T KOG1401 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCC
T ss_conf 28999999999986353477664128998567577623666752346668888777985353055889999999984788
Q ss_pred --CCEEECCCCCCCCCC--CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf --201211354210000--12333321112233333201110122110000012-2332221112333225741465443
Q gi|254780602|r 166 --KWLFLNSPSNPSGVV--YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC-QFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 166 --k~i~l~nP~NPTG~v--~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~-~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
-++++ -|--=-|-+ ..++.++.|.+.| +++|+++|.||+--.|.-.+. -...+..+.|+ +.++.|.
T Consensus 206 ~IaAvIv-EPiqGaGG~~p~~peFl~~l~k~C-~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PD-------I~t~aK~ 276 (433)
T KOG1401 206 EIAAVIV-EPIQGAGGIIPADPEFLIGLRKEC-DDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPD-------ITTVAKP 276 (433)
T ss_pred CEEEEEE-ECCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEHHHHCCCCCCHHHHHHHHCCCCC-------EEEEHHH
T ss_conf 5689997-134578886569889999999998-615966996034317653552778888586976-------0231020
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCC---CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHCCCCC
Q ss_conf 22344544422110122687531001---22233222222222222346--76432222221100000002455304776
Q gi|254780602|r 241 YAMTGLRIGYAAGALSLIKSMIVLQG---QQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRDLCVAQLQGVPGI 315 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~li~~l~~~~~---~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~g~ 315 (400)
++ .|+-+|..++.+++.+.+..-.. -.+++.+++...++...|+. ..+++++....-+.-|+.+.+.+.+-+..
T Consensus 277 L~-gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacs~~~~~l~~l~~pe~~k~vs~~~k~L~~~l~e~~~~~~~~ 355 (433)
T KOG1401 277 LG-GGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKTPNS 355 (433)
T ss_pred CC-CCCEEEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 36-88515788655778865188886555766578805554889999987188999989888789999999986479874
Q ss_pred EEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHH---HHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHH
Q ss_conf 033027408998626410233211332248989999999---98739799835022899728999629999999999999
Q gi|254780602|r 316 RYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGL---LEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRI 392 (400)
Q Consensus 316 ~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~L---l~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl 392 (400)
..---.-++.+............ +.-..+-++...+ +.+.||-++| .|+ ++....+|.++..++.+
T Consensus 356 i~g~~grgl~ig~~~~~p~~~~~---d~~~~~~ll~~~~~~~~~~~gv~i~P-------~~~-l~~~~~~E~i~~~l~i~ 424 (433)
T KOG1401 356 ICGGVGRGLVIGFEFEGPVYKFA---DAAREQGLLILTLGKGLLEEGVRIAP-------IYL-LTVEHTPEVIQRLLTIL 424 (433)
T ss_pred EEEEEEEEEEEEEEEECCHHHHH---HHHHHHHHHHHHHHCCCCCCEEEEEC-------CCC-CCCCCCHHHHHHHHHHH
T ss_conf 36775258899899830505430---13445568888763246225179955-------520-10568689999999999
Q ss_pred HHHHHHC
Q ss_conf 9999860
Q gi|254780602|r 393 KRFCHSL 399 (400)
Q Consensus 393 ~~~l~~l 399 (400)
.+++..+
T Consensus 425 ~k~l~~l 431 (433)
T KOG1401 425 EKVLSAL 431 (433)
T ss_pred HHHHHHH
T ss_conf 9999874
No 318
>KOG1360 consensus
Probab=98.46 E-value=3.6e-07 Score=63.71 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=121.9
Q ss_pred CHHHHHHCCCCC----CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 103331000122----1220121135421000012333321112233333201110122110000012233222111233
Q gi|254780602|r 152 VSPEKLEQAITP----KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSL 227 (400)
Q Consensus 152 ~d~~~l~~~i~~----~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~ 227 (400)
-|++.|++++.. .+|.|-+-+-+.=+|.+.+ +++||++ +.+++.+-+.||++.-=.|+ .+...+..-+.-+
T Consensus 287 ND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDv-ah~yGAiTFlDEVHAVGlYG-~rGaGvgerdGvm 361 (570)
T KOG1360 287 NDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDV-AHKYGAITFLDEVHAVGLYG-PRGAGVGERDGVM 361 (570)
T ss_pred CCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCC---HHHHHHH-HHHHCCEEEEEHHHHHCCCC-CCCCCCCCCCCCC
T ss_conf 99899999997579888826887664026777577---8999778-87717545310123100215-7778766567752
Q ss_pred CCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC---CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 322574146544322344544422110122687531001222---33222222222222346--7643222222110000
Q gi|254780602|r 228 YERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT---SGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRR 302 (400)
Q Consensus 228 ~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~---~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r 302 (400)
..--|+.+++.|.||+-| ||+.+...+++.++.+..-.. +-+|++. ..++++.+. .++- ...|..-+++-
T Consensus 362 ~kvDiIsGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl-~GAleaVr~lk~~eg-~~lR~~hqrnv 436 (570)
T KOG1360 362 HKVDIISGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVL-AGALEAVRILKSEEG-RVLRRQHQRNV 436 (570)
T ss_pred HHHHHCCCCHHHHCCCCC---CEEHHHHHHHHHHHHHCCCEEEECCCCHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_conf 032200140455416654---2330044699999974686687337982888-728999999863254-78999999999
Q ss_pred CCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--CC--EEEEEE
Q ss_conf 00024553047760330274089986264102332113322489899999999873979983502289--97--289996
Q gi|254780602|r 303 DLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGH--GP--SIRISY 378 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~--~~--~iRis~ 378 (400)
.++.+.|.++ |+.+.+-. +--+=+.+. +. ....+.++.|+.+++|.|.. ..|-. .| -+||+-
T Consensus 437 ~~~kq~l~~~-GiPVi~~p-SHIiPv~vg----------da-~l~~~~sd~Li~~h~iYvQa-INyPTV~rG~E~LRiaP 502 (570)
T KOG1360 437 KYVKQLLMEL-GIPVIPNP-SHIIPVRVG----------DA-ALAKQASDILISKHNIYVQA-INYPTVARGTERLRIAP 502 (570)
T ss_pred HHHHHHHHHC-CCCCCCCC-CCEEEEECC----------CH-HHHHHHHHHHHHHCCEEEEE-CCCCCCCCCCEEEECCC
T ss_conf 9999999874-98634788-653335506----------77-77777789988752757885-26874566601342179
Q ss_pred EC--CHHHHHHHHHHHHHH
Q ss_conf 29--999999999999999
Q gi|254780602|r 379 AV--SDAILEEACVRIKRF 395 (400)
Q Consensus 379 ~~--~~e~l~~al~rl~~~ 395 (400)
+. +++.++.-++.|.+.
T Consensus 503 TP~HT~~mm~~lv~~l~~v 521 (570)
T KOG1360 503 TPHHTPQMMNILVNALLDV 521 (570)
T ss_pred CCCCCHHHHHHHHHHHHHH
T ss_conf 9988789999999999999
No 319
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=98.46 E-value=9e-08 Score=67.39 Aligned_cols=233 Identities=15% Similarity=0.135 Sum_probs=131.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC-------CCCHH-HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 97589999999999998699726656589749-------88999-99999999838875699877898999999998642
Q gi|254780602|r 12 QPSATLVAAQRVRDLRSKGIDVLCLTAGEPDF-------DMPEN-VKYAVVRAMERGETKYTAVAGISPLREAIVEKFRR 83 (400)
Q Consensus 12 ~~s~~~~~~~~~~~~~~~g~~ii~l~~G~p~~-------~~p~~-i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~ 83 (400)
+|.+.-++.+..++....|. . ....|.| ++|+. +-+-+..+++.....|..++..-++-+.+.+|+.+
T Consensus 15 ~~~~~~~vl~~~~~~i~p~~--~--~~~hP~f~g~~~~~~~~~~~~~d~la~~~n~n~~~~~~sPa~t~lE~~vi~wl~~ 90 (370)
T pfam00282 15 IPEPLLDILGDIRKNIMPGV--T--TWHSPNFHAYFPAGNSYPSLLGDMLSDAINCNGFTWESSPACTELENVVMDWLAK 90 (370)
T ss_pred CCCCHHHHHHHHHHHHHCCC--C--CCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHHHHHHH
T ss_conf 99899999999998871678--8--8989990486578888899999999998563666620082689999999999999
Q ss_pred HCCCCCC-----CCCCCCCCCCCCCCCCCCCCCCC--------CC---CC-CC-CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1013333-----22332334543333222222233--------22---32-22-23333232222222222222222222
Q gi|254780602|r 84 DNDLHYT-----SDQIIVGTGAKHVIFNALMATVN--------MG---DE-VL-IPRPYWVSYPDMVALCGGIPVFVDTQ 145 (400)
Q Consensus 84 ~~g~~~~-----~e~I~it~G~~~~l~~~~~~~~~--------~G---d~-Vl-v~~P~y~~y~~~~~~~g~~~~~v~~~ 145 (400)
..|++-. ...=++|+|++.+...++.+--+ .| ++ |+ +.+-+-......+..+|..++.||++
T Consensus 91 l~g~p~~~~~~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~g~~~~~~vi~~S~~aH~Sv~Kaa~~lGlg~~~V~~d 170 (370)
T pfam00282 91 MLGLPKEFLGSGQGGGVLQGGSSESNLLALLAARTKWIRRMKAAGKPLGKLVAYTSDQAHSSIEKAALIAGVELREIPTD 170 (370)
T ss_pred HHCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEEC
T ss_conf 96686444168888648736478999999999999999987641798687499976632799999999749983695368
Q ss_pred CCCCCCCHHHHHHCCCCCCC---C--C-EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
Q ss_conf 22322210333100012212---2--0-1211354210000123333211122333332011101221100000122332
Q gi|254780602|r 146 QDDNFQVSPEKLEQAITPKT---K--W-LFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSN 219 (400)
Q Consensus 146 ~~~~~~~d~~~l~~~i~~~~---k--~-i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s 219 (400)
++ +.+|+++|+++|.+.. . + |+.+-..-.||.+ +.+++|.++| +++++|+-+|.+|....+-..++.+
T Consensus 171 ~~--~~m~~~~L~~~i~~~~~~g~~p~~VvataGTT~tGai---D~l~~i~~i~-~~~~lWlHVDaA~GG~~~l~~~~r~ 244 (370)
T pfam00282 171 EN--GKMRGMDLEKAIEEDKENGLIPFFVCATLGTTGSGAF---DPLQELGDIC-NKYDLWLHVDAAYAGSAFICPEFRH 244 (370)
T ss_pred CC--CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC---CCHHHHHHHH-HHCCCEEEEEHHHHHHHHHCHHHHH
T ss_conf 98--8829999999999998679974499986377177134---7899999999-9839808842333347882985577
Q ss_pred CCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-HHHHH
Q ss_conf 2211123332257414654432234454442211-01226
Q gi|254780602|r 220 IVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG-ALSLI 258 (400)
Q Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~-~~~li 258 (400)
...-.+. -..|++. +.|.+.+| .-+|++.. +++.+
T Consensus 245 ~~~gie~--aDSi~~d-~HK~l~~P-~~~s~~l~rd~~~l 280 (370)
T pfam00282 245 WLFGIER--ADSFSFN-PHKWMLVL-LDCSALWVRDKGAL 280 (370)
T ss_pred HHCCCCC--CCEEEEC-CHHCCCCC-CCEEEEEEECHHHH
T ss_conf 7569877--8579778-05501878-87589999487998
No 320
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.46 E-value=1.8e-07 Score=65.51 Aligned_cols=194 Identities=21% Similarity=0.276 Sum_probs=117.3
Q ss_pred HHHHHHHHH-HH----CCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999999-83----88756998-7789899999999864210133332233233454333322222223322322223
Q gi|254780602|r 48 NVKYAVVRA-ME----RGETKYTA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIP 121 (400)
Q Consensus 48 ~i~~a~~~a-l~----~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~ 121 (400)
.|++|.++. +. .+.+||+. .-|...|-. -|.+-+|.+-..-+.-+.+| +++|..++..+++|||+.+.-
T Consensus 39 kVL~AF~~~rvs~~hf~~stGYGydD~GRdtLe~----vyA~vf~aE~a~VRpq~isG-THAI~~aLfg~LRpgDell~i 113 (416)
T COG4100 39 KVLEAFRHHRVSESHFTGSTGYGYDDLGRDTLER----VYAQVFGAEAALVRPQIISG-THAIACALFGILRPGDELLYI 113 (416)
T ss_pred HHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHH----HHHHHHCCCCCEEEEEEECC-HHHHHHHHHHCCCCCCEEEEE
T ss_conf 9999998543530025788877765322667999----99998554100231055236-029999998426888747775
Q ss_pred --CCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCC----CCCCC
Q ss_conf --33323222222----------222222222222222322210333100012212201211354210000----12333
Q gi|254780602|r 122 --RPYWVSYPDMV----------ALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVV----YSQNR 185 (400)
Q Consensus 122 --~P~y~~y~~~~----------~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v----~s~~~ 185 (400)
.| |...+..+ .-.|..-..+|+..++ .+|.+.++.+++++||+|.+- --+|.. ++-++
T Consensus 114 ~G~P-YDTLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~~g--kiD~~~v~~~i~~~tkli~IQ---RS~GY~~RpS~~I~e 187 (416)
T COG4100 114 TGSP-YDTLEEVIGLRGEGQGSLKDFGIKYKAVPLTADG--KIDIQAVKTAISDRTKLIGIQ---RSKGYAWRPSLSIAE 187 (416)
T ss_pred CCCC-CHHHHHHHCCCCCCCCCHHHHCCCEEECCCCCCC--CCCHHHHHHHCCCCCEEEEEE---ECCCCCCCCCCCHHH
T ss_conf 2886-0568987562777854278738550021356688--233899987508552599997---325767788642999
Q ss_pred CCCCCCCCC-CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC--CCCCCCCHHHHHHHHH
Q ss_conf 321112233-3332011101221100000122332221112333225741465443223445--4442211012268753
Q gi|254780602|r 186 LRALADVLV-RNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL--RIGYAAGALSLIKSMI 262 (400)
Q Consensus 186 l~~i~~~~a-~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~--RiG~~v~~~~li~~l~ 262 (400)
+++++++.. .+.++++++|.+|.+|+- ..+++.... -+.-+|+=|+-+ .|+ --||+++.++++++..
T Consensus 188 I~~~i~~vk~inpn~ivFVDNCYGEFvE-~~EPt~vGa--------DliAGSLIKNpG-GgiaktGGYiaGk~~~ve~~~ 257 (416)
T COG4100 188 IEEMITFVKEINPNVIVFVDNCYGEFVE-EKEPTHVGA--------DLIAGSLIKNPG-GGIAKTGGYIAGKAELVEAAA 257 (416)
T ss_pred HHHHHHHHHHCCCCEEEEEECCCHHHHH-CCCCCCCCH--------HHHCCCEEECCC-CCEEECCCEEECHHHHHHHHC
T ss_conf 9999999984499779998056365541-148630053--------342032132799-866511645524688987641
No 321
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=98.46 E-value=7.7e-08 Score=67.82 Aligned_cols=359 Identities=15% Similarity=0.147 Sum_probs=190.9
Q ss_pred HHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCC----CC-
Q ss_conf 999869972665658974988999999999998388---7569987789899999999864210133-33223----32-
Q gi|254780602|r 25 DLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERG---ETKYTAVAGISPLREAIVEKFRRDNDLH-YTSDQ----II- 95 (400)
Q Consensus 25 ~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~---~~~Y~~~~G~~~lR~aia~~~~~~~g~~-~~~e~----I~- 95 (400)
|+-=.|..-+||+.=--.+ .-|++.+-|.++++.. .--||-+.-..+.| ...-+.+.+..+ +..++ |=
T Consensus 42 EL~LDGNprLNLAsFV~Tw-me~EA~KLm~e~~~KN~ID~dEYPqTar~i~~R--CVnM~a~LfhAp~~~D~~~~savGt 118 (493)
T TIGR01788 42 ELSLDGNPRLNLASFVTTW-MEPEAEKLMDETLNKNMIDKDEYPQTAREIENR--CVNMLADLFHAPALKDEEAASAVGT 118 (493)
T ss_pred HCCCCCCHHHHHHCCCCCC-CCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHC--CEEHHHHHHCCCCCCCCCCCCCEEC
T ss_conf 4045776222321324787-776789999725577701100165448988504--3012344114787778775664351
Q ss_pred CCCCCCCCCCCCCCCC-----------CCCCC--C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 3345433332222222-----------33223--2--2223333232222222222222222222223222103331000
Q gi|254780602|r 96 VGTGAKHVIFNALMAT-----------VNMGD--E--VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 96 it~G~~~~l~~~~~~~-----------~~~Gd--~--Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
=|.||+||+.+..+|+ ..|.| + +|+..=.=.+++..++...+.++.||++.-+++.+|+|++-+.
T Consensus 119 sTiGSSEAiMLGGlAmK~rWr~R~~~~Gk~~d~kKPNlv~g~~vQVCWEKF~RYfdVE~R~VP~~~r~r~~i~Pe~~~~~ 198 (493)
T TIGR01788 119 STIGSSEAIMLGGLAMKWRWRKRMKAAGKPADAKKPNLVMGSNVQVCWEKFARYFDVELREVPMDKRDRYVIDPEEVVDL 198 (493)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCEEEEEEEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 77325899998777757999999986388878788723607986164212203355401367207777601188999986
Q ss_pred CCCCCCCEEECCCCCCCCCCCCC--CCCCCCCCCCC----CC-----CCCEEECCCCCCCCCCC---CCCCCCCCCCCCC
Q ss_conf 12212201211354210000123--33321112233----33-----32011101221100000---1223322211123
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQ--NRLRALADVLV----RN-----PHVHIISDDIYEHIVYR---NCQFSNIVNVEPS 226 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~--~~l~~i~~~~a----~~-----~~i~ii~De~Y~~l~~~---~~~~~s~~~~~~~ 226 (400)
|+|+|=.|+.+ .|++|+- |.+++|.+.+. ++ .|+.|-.|.|=+.|+-. +++| ..+.|+
T Consensus 199 vDENTIGV~~I-----LG~TyTG~yE~v~~lnD~L~~~~~~~PDWsg~d~PiHvDAASGGFi~PFGfekeh---mk~~PD 270 (493)
T TIGR01788 199 VDENTIGVVAI-----LGTTYTGEYEDVKALNDLLEELNAKTPDWSGWDIPIHVDAASGGFIAPFGFEKEH---MKVEPD 270 (493)
T ss_pred HCCCCCEEEEE-----CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC---EEECCC
T ss_conf 07675248887-----4723258708889999999997427887477876647744678811376635341---154571
Q ss_pred C-----CCEEEEEC-CCCC-CCCCCCCCCCCCCC------HHHHHHHHHHHC---CCCCCCCCCCCCCCCCCCC---CCC
Q ss_conf 3-----32257414-6544-32234454442211------012268753100---1222332222222222223---467
Q gi|254780602|r 227 L-----YERTLVVN-GVSK-AYAMTGLRIGYAAG------ALSLIKSMIVLQ---GQQTSGACSIAQWAAVEAL---NGP 287 (400)
Q Consensus 227 ~-----~~~~i~~~-S~SK-~~~~~G~RiG~~v~------~~~li~~l~~~~---~~~~~~~~~~~q~a~~~~l---~~~ 287 (400)
+ -+||+.|+ |-.| .+.-|| |||++= |+||+=+++-+- ...+.+=|.++-.++.+++ +-+
T Consensus 271 l~WDFRLprV~SINvSGHKYGLvYPG--vGWViWRd~e~LPeELiF~vnYLGg~~~tFtLNFSrp~~qViaQYYnFlRLG 348 (493)
T TIGR01788 271 LEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLG 348 (493)
T ss_pred EEECCCCCCEEEECCCCCCCCCCCCC--CCEEEECCCCCCHHHCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 26566178246870465512464766--1268875811370131110110266565430135576231136446688504
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCC---CC-CEEEECCC--------------CEEEE-----EECCCCCCCCCCCCC--
Q ss_conf 6432222221100000002455304---77-60330274--------------08998-----626410233211332--
Q gi|254780602|r 288 QDFVVNNRKIFEYRRDLCVAQLQGV---PG-IRYMIPDG--------------AFYLY-----PSCQDLIGKKSPSGD-- 342 (400)
Q Consensus 288 ~~~~~~~~~~~~~~r~~~~~~L~~~---~g-~~~~~p~g--------------~~y~~-----~~~~~~~~~~~~~~~-- 342 (400)
.+-...+.+......+.|.+.|.++ || +.+.. +| -|.=. -.+|-...+......
T Consensus 349 ~~GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s-~g~~sienDsaPksvkDYWehPqaY~~~~P~VaFrLKd~~~~~ 427 (493)
T TIGR01788 349 REGYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILS-DGRESIENDSAPKSVKDYWEHPQAYKSGIPLVAFRLKDDADEE 427 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-CCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf 013489999899999999999998606998458871-7875433456774012331364122789777988536877888
Q ss_pred -CCCCHHHHHHHHHHHCCEEEECCCCCCCC-C---E---EEEEEE--CCHHHHHHHHHHHHHHHHHC
Q ss_conf -24898999999998739799835022899-7---2---899962--99999999999999999860
Q gi|254780602|r 343 -VIRTDLDFVNGLLEIEKVAVVQGSSFGHG-P---S---IRISYA--VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 343 -~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~-~---~---iRis~~--~~~e~l~~al~rl~~~l~~l 399 (400)
..-+-.+++++| +..| -++|......+ . . .||-+- -+.+--+.-++=+++.++.|
T Consensus 428 Y~~Yt~~~ls~~L-R~rG-WiVPAYtlP~~~~GsDd~~v~RiVvRe~~~~d~A~~Li~D~~~~~~~L 492 (493)
T TIGR01788 428 YTGYTLYDLSHKL-RERG-WIVPAYTLPKNAEGSDDIEVLRIVVREDFSRDLAELLIEDLEKALAYL 492 (493)
T ss_pred CCCCCHHHHHHHH-HHCC-CCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8767899999985-0347-313478884335677872799998725898406999999999999971
No 322
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.43 E-value=5.8e-07 Score=62.47 Aligned_cols=208 Identities=15% Similarity=0.205 Sum_probs=116.4
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 972665658974988999999999998388756998---778989999999986421013333223323345433332--
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF-- 105 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~-- 105 (400)
+-+|+|+.=-|.+.+--++.-.--..+ ...+-|.| .+|..++-..+.+|+..-.|.+ .-.+-..+|++.-+.
T Consensus 500 ~sMIPLGSCTMKLNAtsEM~PiswPeF-a~iHPfaP~~Q~~Gy~~l~~~L~~~L~~iTG~~--~vslQPnaGaqGE~aGl 576 (954)
T PRK12566 500 QAMIPLGSCTMKLNATSEMIPITWPEF-AQLHPFAPREQAEGYKAMIDELEAWLCAITGFD--AICMQPNSGAQGEYAGL 576 (954)
T ss_pred HCCCCCCCEEEECCCHHHHHHHCCHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--CEECCCCCCCCHHHHHH
T ss_conf 325106620230382565211063867-437999997899999999999999999866856--04257787751068999
Q ss_pred CCCCCCC-CCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC---CCCCCEEECCCCCCC
Q ss_conf 2222223-322----32222333323222222222222222222222322210333100012---212201211354210
Q gi|254780602|r 106 NALMATV-NMG----DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT---PKTKWLFLNSPSNPS 177 (400)
Q Consensus 106 ~~~~~~~-~~G----d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~k~i~l~nP~NPT 177 (400)
++++... ..| +.+|+|+-.-......+.++|.+++.|+++++++ +|+++|++++. ++..++++++|+ |
T Consensus 577 ~~ir~yh~~~g~~~R~icLIP~SAHGTNPASA~maG~~Vv~v~~~~~G~--iD~~dL~~k~~~~~~~laa~MiTyPs--T 652 (954)
T PRK12566 577 LAIRRYHESRGQSQRDICLIPASAHGTNPASAQMAGMRVVIVECDNDGN--VDLDDLKAKAAEAGDRLSCLMITYPS--T 652 (954)
T ss_pred HHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEECCCCCC--CCHHHHHHHHHHHHHHHHHHHCCCCC--C
T ss_conf 9999999974998883799678988889778976696689960189998--48999999999726654434300676--4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CCC-CCEEEEECCCCCCCCCC----CCCCCCC
Q ss_conf 00012333321112233333201110122110000012233222111-233-32257414654432234----4544422
Q gi|254780602|r 178 GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PSL-YERTLVVNGVSKAYAMT----GLRIGYA 251 (400)
Q Consensus 178 G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~~-~~~~i~~~S~SK~~~~~----G~RiG~~ 251 (400)
=-++ .+.+++||++. .+++-.+-. ||.....+..+. |+. .-.+.+++ +.|+|+.| |--+|=+
T Consensus 653 ~Gvf-E~~i~ei~~~v-H~~GGqvY~---------DGANmNA~vG~~~Pg~~G~Dv~HlN-LHKTF~iPHGGGGPG~GPi 720 (954)
T PRK12566 653 HGVY-EEGIREICEVV-HQHGGQVYM---------DGANLNAQVGLARPADIGADVSHMN-LHKTFCIPHGGGGPGMGPI 720 (954)
T ss_pred CCCH-HHHHHHHHHHH-HHHCCEEEE---------CCCCHHHHHCCCCCCCCCCCCEEEE-CHHCCCCCCCCCCCCCCCE
T ss_conf 5122-55599999999-970988985---------4632232414457200367602320-0220368878888987766
Q ss_pred CCHHHH
Q ss_conf 110122
Q gi|254780602|r 252 AGALSL 257 (400)
Q Consensus 252 v~~~~l 257 (400)
...+.+
T Consensus 721 ~v~~hL 726 (954)
T PRK12566 721 GVRAHL 726 (954)
T ss_pred EEHHHC
T ss_conf 664231
No 323
>KOG1404 consensus
Probab=98.39 E-value=2e-06 Score=59.26 Aligned_cols=339 Identities=16% Similarity=0.135 Sum_probs=160.3
Q ss_pred CCCCEEECCCCCCC--C-CCCHHHHHHHHHHHHCC---CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658974--9-88999999999998388---756998778989999999986421013333223323345433
Q gi|254780602|r 29 KGIDVLCLTAGEPD--F-DMPENVKYAVVRAMERG---ETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 29 ~g~~ii~l~~G~p~--~-~~p~~i~~a~~~al~~~---~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
.|+.++|+..|-.. + --.|.|.+++.+.+..- ..+|...+ ..+|-++++..+- -+-..++++|++++
T Consensus 48 ~G~ryLD~f~Gi~tvslGHchP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~P------~~l~~vfF~nsGsE 120 (442)
T KOG1404 48 EGRRYLDAFGGIVTVSLGHCHPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKLP------GDLKVVFFVNSGSE 120 (442)
T ss_pred CCCEEEHHHCCEEEEECCCCCHHHHHHHHHHHHHHEEEECCCCCCC-HHHHHHHHHHHCC------CCCEEEEEECCCCH
T ss_conf 8865002208748997378884789999986453287301214870-8999999998688------77128999558745
Q ss_pred CCCCCCCCC---CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCC--CCCCC------------------------CCCCCC
Q ss_conf 332222222---3322322223333232222-22222222222--22222------------------------232221
Q gi|254780602|r 103 VIFNALMAT---VNMGDEVLIPRPYWVSYPD-MVALCGGIPVF--VDTQQ------------------------DDNFQV 152 (400)
Q Consensus 103 ~l~~~~~~~---~~~Gd~Vlv~~P~y~~y~~-~~~~~g~~~~~--v~~~~------------------------~~~~~~ 152 (400)
|..+++... .+.- .+|-..-+|-.-.. .+.+.|..+.. +|... ...+.-
T Consensus 121 ANelal~mar~Yt~~~-diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404 121 ANELALKMARLYTGNL-DIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred HHHHHHHHHHHHCCCC-EEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 8899999999862971-588750553677355302446776455678887765126899831156799732456888888
Q ss_pred HHHHHHCCCCCCCCCEEECCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 033310001221220121135-4210000-12333321112233333201110122110000012233222111233322
Q gi|254780602|r 153 SPEKLEQAITPKTKWLFLNSP-SNPSGVV-YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYER 230 (400)
Q Consensus 153 d~~~l~~~i~~~~k~i~l~nP-~NPTG~v-~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~ 230 (400)
+++++-..-.+.+-+-+++-| +--.|.+ +++--+++..+.| |+++.+.|.||+-..|.-.| ++++.+. .+.
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v-~k~Ggl~IaDEVqtGfGRtG----~~wgfe~--h~v 272 (442)
T KOG1404 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVV-RKRGGLFIADEVQTGFGRTG----HMWGFES--HGV 272 (442)
T ss_pred HHHHHHHHCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHH-HHCCCEEEEHHHHHCCCCCC----CCCCCCC--CCC
T ss_conf 7778887358775147875300167753138811899999999-97597898543443645552----5101001--687
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHH
Q ss_conf 57414654432234454442211012268753100-1222332222222222223467-643222222110000000245
Q gi|254780602|r 231 TLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQ-GQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 231 ~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~-~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~ 308 (400)
+=-+-|++|..+ .|+-+|.++..+++.+-+.+.. -..+.+.+++.-.++.+.|+-- ++.+.+.. .+.-.++.+.
T Consensus 273 ~PDIvTmAKgiG-nG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~a---a~vG~yl~~~ 348 (442)
T KOG1404 273 VPDIVTMAKGIG-NGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENA---AEVGSYLLEK 348 (442)
T ss_pred CCCHHHHHHHCC-CCCCCEEEECCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
T ss_conf 720999986524-887002563278999999852135203378825678889999999887678889---9999999999
Q ss_pred HHCC----CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECCH
Q ss_conf 5304----77603302740899862641023321133224898999999998739799835022899728999--62999
Q gi|254780602|r 309 LQGV----PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVSD 382 (400)
Q Consensus 309 L~~~----~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~~ 382 (400)
|.++ +-+-=.+.. |.++=+.+-+ .+..+..-...-...+.+. .+++||++--|.-+|. .+||+ ++.+.
T Consensus 349 l~~l~d~h~iIGdVRG~-GLm~GvE~V~--dk~~~~pp~~~~~~~i~~~-cke~Gvlvg~g~i~G~--vfriaPPlciT~ 422 (442)
T KOG1404 349 LAALKDKHPIIGDVRGR-GLMLGVELVS--DKSEPKPPATAEGAVIGEQ-CKELGVLVGKGGIHGN--VFRIAPPLCITK 422 (442)
T ss_pred HHHHHHCCCCEEECCCC-EEEEEEEEEC--CCCCCCCCCHHHHHHHHHH-HHHHCEEEECCCCCCE--EEEECCCEECCH
T ss_conf 99874148735521354-1488888722--6677889406778899899-8974856410423231--798369854348
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780602|r 383 AILEEACVRI 392 (400)
Q Consensus 383 e~l~~al~rl 392 (400)
|+++-+++-.
T Consensus 423 edi~f~~~~~ 432 (442)
T KOG1404 423 EDIDFAVEYF 432 (442)
T ss_pred HHHHHHHHHH
T ss_conf 9988999999
No 324
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.33 E-value=1e-06 Score=60.93 Aligned_cols=194 Identities=14% Similarity=0.232 Sum_probs=113.0
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC--
Q ss_conf 972665658974988999999999998388756998---778989999999986421013333223323345433332--
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF-- 105 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~-- 105 (400)
+-+|+|+.=-|.+.+.-++.-.--..+ ...+-|.| .+|..++-..+.+|+..-.|.+ .=.+-..+|++. -+
T Consensus 499 ~sMIPLGSCTMKLNAaaEM~PvswPeF-a~iHPf~P~~q~~Gy~~~~~~l~~~L~~itG~~--~vSlQPnaGaqG-E~aG 574 (955)
T PRK05367 499 RSMIPLGSCTMKLNAAAEMIPVTWPEF-ANLHPFAPAEQAAGYRELIADLEAWLAEITGYD--AVSLQPNAGSQG-EYAG 574 (955)
T ss_pred CCCEECCCCEECCCCHHHCCCCCCHHH-HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC--EEECCCCCCHHH-HHHH
T ss_conf 053025642013561432256450767-516999986888999999999999999976888--674178865089-9999
Q ss_pred -CCCCCCC-CCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC---CCCCCEEECCCCCC
Q ss_conf -2222223-322----32222333323222222222222222222222322210333100012---21220121135421
Q gi|254780602|r 106 -NALMATV-NMG----DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT---PKTKWLFLNSPSNP 176 (400)
Q Consensus 106 -~~~~~~~-~~G----d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~k~i~l~nP~NP 176 (400)
+++++.. ..| +.+|+|+-.-......+.++|.+++.++++++++ +|+++|++++. ++..++++++|+ -
T Consensus 575 ll~Ir~Yh~~~g~~~R~i~LiP~SAHGTNpASA~maG~kVv~v~~d~~G~--iD~~dL~~k~~~~~~~laa~MiTyPs-T 651 (955)
T PRK05367 575 LLAIRAYHESRGEGHRNICLIPSSAHGTNPASAQMAGMKVVVVACDENGN--IDLDDLRAKAEQHADNLAALMITYPS-T 651 (955)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEEEECCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCC-C
T ss_conf 99999999975987786799556678888666876497689973089999--69999999999865776788744776-4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CC-CCCEEEEECCCCCCCCCC
Q ss_conf 000012333321112233333201110122110000012233222111-23-332257414654432234
Q gi|254780602|r 177 SGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PS-LYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 177 TG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~-~~~~~i~~~S~SK~~~~~ 244 (400)
.| ++ .+.++++|++. .+++-.+-. ||.....+..+. |+ +.-.+.+++ +.|+|+.|
T Consensus 652 ~G-vF-E~~I~ei~~~v-H~~GGqvY~---------DGANmNA~vG~~~Pg~~G~Dv~HlN-LHKTF~iP 708 (955)
T PRK05367 652 HG-VF-EETIREICEIV-HDHGGQVYL---------DGANMNAQVGLTRPGDIGADVSHLN-LHKTFCIP 708 (955)
T ss_pred CC-CC-HHHHHHHHHHH-HHCCCEEEE---------CCCCCCCEECCCCHHHCCCCHHEEC-CCCCCCCC
T ss_conf 56-60-67799999999-854998975---------4644003023025876472031001-33221246
No 325
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.28 E-value=1e-05 Score=54.88 Aligned_cols=274 Identities=12% Similarity=0.075 Sum_probs=136.8
Q ss_pred HHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCC--CCCCC-----CCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999869972665-6589749889999999999983887--56998-----778989999999986421013
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCL-TAGEPDFDMPENVKYAVVRAMERGE--TKYTA-----VAGISPLREAIVEKFRRDNDL 87 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l-~~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~-----~~G~~~lR~aia~~~~~~~g~ 87 (400)
=.++....+++.++++...+| +.|--+.-+|+.|.+.+. .++. +.|+| +||..+.-=....-.....|+
T Consensus 49 E~e~~~~l~~la~kN~~~~sfiG~G~y~h~vP~vi~~~i~---~r~efyTaYTPYQpEiSQG~LqalfefQtmi~eLTGm 125 (429)
T pfam02347 49 EYEMLAELEAIASKNKIYKSFIGMGYYDTIIPAVILRNIL---ENPEWYTQYTPYQPEISQGRLEALLNFQTMVCDLTGL 125 (429)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHC---CCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999997589766315787779765815646540---4766430369998154437999999999999998588
Q ss_pred CCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHCC
Q ss_conf 33322332334543---33322222223322322223333232222222----222222222222223222103331000
Q gi|254780602|r 88 HYTSDQIIVGTGAK---HVIFNALMATVNMGDEVLIPRPYWVSYPDMVA----LCGGIPVFVDTQQDDNFQVSPEKLEQA 160 (400)
Q Consensus 88 ~~~~e~I~it~G~~---~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (400)
++.--. +-.|++ +|+.++.+..-+..++|+|+.-.+|.+...++ ..|.+++.+++.+. ...
T Consensus 126 dvaNAS--lyD~aTA~aEA~~ma~r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~~~~~~----------~~~ 193 (429)
T pfam02347 126 DVANAS--LLDEGTAAAEAMALAARISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEVDLTEE----------GFS 193 (429)
T ss_pred CCCCCC--CCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCC----------CCC
T ss_conf 756876--66678899999999876515788779982887831899999754227957999672001----------455
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
..+++-++++-+|| -.|.+- ++.++.+++ +..+.++|+- + ..+...--+ .|+-+.--|++++. ..
T Consensus 194 ~~~~~a~v~~q~Pn-~~G~ie---d~~~i~~~~-h~~gal~iv~-~-dplsL~ll~-------~Pg~~GaDI~vG~~-Q~ 258 (429)
T pfam02347 194 DEGDVFGVLVQYPN-TEGRIE---DYKELIEIA-HQHGSLVVVA-A-DLLALTILK-------PPGEFGADIVVGSA-QR 258 (429)
T ss_pred CCCCEEEEEEECCC-CCCCEE---CCHHHHHHH-HHCCCEEEEE-E-CHHHHCCCC-------CCCCCCCCEEEECC-CC
T ss_conf 55476899993799-983172---349999998-6459669998-0-779960768-------97656633797257-65
Q ss_pred CCC----CCCCCCCCCCHHHHHHHHHHH----------------------------CCCCCCCCCCCC-CC-CCCCCCCC
Q ss_conf 223----445444221101226875310----------------------------012223322222-22-22222346
Q gi|254780602|r 241 YAM----TGLRIGYAAGALSLIKSMIVL----------------------------QGQQTSGACSIA-QW-AAVEALNG 286 (400)
Q Consensus 241 ~~~----~G~RiG~~v~~~~li~~l~~~----------------------------~~~~~~~~~~~~-q~-a~~~~l~~ 286 (400)
||+ .|--.||+.+.+++++.+-.. +....+|.+.-. .. ++..+.-.
T Consensus 259 lGipm~fGGP~~gf~a~~~~~~R~~PGRivG~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnqaL~A~~a~~Y~~~~ 338 (429)
T pfam02347 259 FGVPMGYGGPHAGFFAVKEELKRKMPGRIVGVSKDANGKRALRLALQTREQHIRRDKATSNICTAQALLANMAAMYAVYH 338 (429)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 78887889882001544888997499764467758899873365412434303344420346500899999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEE
Q ss_conf 764322222211000000024553047760330
Q gi|254780602|r 287 PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMI 319 (400)
Q Consensus 287 ~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~ 319 (400)
+.+-+.+..+....+..++.+.|.+++|+.+..
T Consensus 339 Gp~GL~~iA~~~~~~A~yl~~~L~~~~g~~~~~ 371 (429)
T pfam02347 339 GPKGLKEIARRIHSLTLYLAKGLKKLAGHELDH 371 (429)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCC
T ss_conf 978899999999999999999998669976679
No 326
>KOG1383 consensus
Probab=98.21 E-value=1.2e-06 Score=60.52 Aligned_cols=240 Identities=17% Similarity=0.168 Sum_probs=131.0
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCC----------CCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 989999999986421013333223-32334543333222222----------2332232222333323222222222222
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQ-IIVGTGAKHVIFNALMA----------TVNMGDEVLIPRPYWVSYPDMVALCGGI 138 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~-I~it~G~~~~l~~~~~~----------~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~ 138 (400)
.-++-+++.+++.+.++-+ ++. =..|.|+++++.++... +..| +++.+.-.-..+...++..+.+
T Consensus 118 ~~~~e~~~Vnm~~~L~~~~--~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~i~~p--~iv~~~~v~~a~eK~a~yf~v~ 193 (491)
T KOG1383 118 VRKLEAECVNMIANLFNAP--SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKP--NIVTPQNVHAAFEKAARYFEVE 193 (491)
T ss_pred HHHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHHHHHEEEE
T ss_conf 5899999999999984699--64567554465168888989999999740598871--0021588999999987667999
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC-CCC-
Q ss_conf 222222222322210333100012212201211354210000123333211122333332011101221100000-122-
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYR-NCQ- 216 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~-~~~- 216 (400)
...+|+++ +.|++|+..+.+.++++|..++..-|+=|+|.+ +..++|.+.+.+..++.|-.|.+-+.|+-. +..
T Consensus 194 l~~V~~~~-~~~~~D~~k~~~~i~eNti~lV~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~ 269 (491)
T KOG1383 194 LREVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLN 269 (491)
T ss_pred EEEEECCC-CCEEECHHHHHHHHCCCEEEEEEECCCCCCCCC---HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC
T ss_conf 97650363-225762999998753463799997588876730---15999999999872775042016766210132457
Q ss_pred CCCCCCCCCCCCCEEEEEC-CCCC-CCCCCCCCCCCCC-CHHHHHHH-HHHHCCCC-------CCCCCCC-----CCCCC
Q ss_conf 3322211123332257414-6544-3223445444221-10122687-53100122-------2332222-----22222
Q gi|254780602|r 217 FSNIVNVEPSLYERTLVVN-GVSK-AYAMTGLRIGYAA-GALSLIKS-MIVLQGQQ-------TSGACSI-----AQWAA 280 (400)
Q Consensus 217 ~~s~~~~~~~~~~~~i~~~-S~SK-~~~~~G~RiG~~v-~~~~li~~-l~~~~~~~-------~~~~~~~-----~q~a~ 280 (400)
...+.--.| .|-.++ +-.| .|.++| +||++ .++++... +.....+. +.+-|.+ .|+++
T Consensus 270 ~~~fdFr~p----~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~l~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~ 343 (491)
T KOG1383 270 EEEFDFRVP----GVTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAA 343 (491)
T ss_pred CCCCCCCCC----CEEEEEECCCEEEEECCC--CEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 545666888----811487235300013078--57999856666654389842546765567521257851289999999
Q ss_pred CCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCCCCCEEE-ECCCCEEE
Q ss_conf 22234676-432222221100000002455304776033-02740899
Q gi|254780602|r 281 VEALNGPQ-DFVVNNRKIFEYRRDLCVAQLQGVPGIRYM-IPDGAFYL 326 (400)
Q Consensus 281 ~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~-~p~g~~y~ 326 (400)
++..++ .|.+. .+...+....+.+.+++++++.+. +|.=+|-+
T Consensus 344 --~~~lG~eGY~~~-~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~ 388 (491)
T KOG1383 344 --LMSLGEEGYREN-TQNIVETARKLREGIENIKGIKIVGKPLVSFIL 388 (491)
T ss_pred --HHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEE
T ss_conf --998617889999-999999999999865435561332787379997
No 327
>KOG2467 consensus
Probab=98.18 E-value=6e-05 Score=50.18 Aligned_cols=319 Identities=16% Similarity=0.161 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCC--CCHHHH---HHHHHH-HHHHCCCC
Q ss_conf 9999999999998699726656589749889999999999983887-5699877--898999---999998-64210133
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVA--GISPLR---EAIVEK-FRRDNDLH 88 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~--G~~~lR---~aia~~-~~~~~g~~ 88 (400)
+.++.++-++.+..|.++|.= + +| +...|.||+-..+.+.. -|||..+ |--|.. |.+|+. -..-|+
T Consensus 28 v~~ii~~Ek~RQ~~gieLIaS---E-NF-ts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~-- 100 (477)
T KOG2467 28 VHDIIEKEKERQKRGIELIAS---E-NF-TSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFG-- 100 (477)
T ss_pred HHHHHHHHHHHHHCCEEEEEC---C-CC-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC--
T ss_conf 999999888864424167513---5-51-1799999875775065556888651337535789999999999999809--
Q ss_pred CCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCC----CCCC-CCCCCC----CCCCCCCCCCCCCCCCHH
Q ss_conf 3322----332334543333222222233223222233-3323----2222-222222----222222222223222103
Q gi|254780602|r 89 YTSD----QIIVGTGAKHVIFNALMATVNMGDEVLIPR-PYWV----SYPD-MVALCG----GIPVFVDTQQDDNFQVSP 154 (400)
Q Consensus 89 ~~~e----~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~-P~y~----~y~~-~~~~~g----~~~~~v~~~~~~~~~~d~ 154 (400)
++|+ ||-.-+| +.|.+.+..+++.|+|+|+-.+ |.=. .|.. .-+... .+-.++.++++.|+ +|.
T Consensus 101 ldp~kWGVNVQp~SG-SPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~-IDY 178 (477)
T KOG2467 101 LDPEKWGVNVQPYSG-SPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGY-IDY 178 (477)
T ss_pred CCHHHCCEEECCCCC-CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCC-EEH
T ss_conf 988887333002789-830567875414877713403579887555640168854224664300486102798781-306
Q ss_pred HHHHCCC-CCCCCCEEECCCCCCCCCCCCC----CCCCCCCCCCCCCCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3310001-2212201211354210000123----333211122333332011101221-100000122332221112333
Q gi|254780602|r 155 EKLEQAI-TPKTKWLFLNSPSNPSGVVYSQ----NRLRALADVLVRNPHVHIISDDIY-EHIVYRNCQFSNIVNVEPSLY 228 (400)
Q Consensus 155 ~~l~~~i-~~~~k~i~l~nP~NPTG~v~s~----~~l~~i~~~~a~~~~i~ii~De~Y-~~l~~~~~~~~s~~~~~~~~~ 228 (400)
|.|++.- .=++|+|+. .++.|++ +++++|++- .+.++++|-+| +.|+-.+.- +|. +
T Consensus 179 D~Le~~A~~frPk~iia------G~SaY~R~~DYaR~R~Iad~----~gA~Lm~DMAHISgLVAA~vi-psP-------F 240 (477)
T KOG2467 179 DKLEKTATLFRPKLIIA------GTSAYSRLIDYARFRKIADK----VGAYLMADMAHISGLVAAGVI-PSP-------F 240 (477)
T ss_pred HHHHHHHHHCCCCEEEE------CCCCCHHHCCHHHHHHHHHH----CCCEEEHHHHHHHHHHHCCCC-CCC-------C
T ss_conf 88888887518737995------36321323138999999875----280664135667777752667-996-------4
Q ss_pred CE-EEEECCCCCCCCCCCCCCCCCCC---HH--------H----HHHHHHHH-CCCCCCCCCCCCCCCCCCCCCCC--CC
Q ss_conf 22-57414654432234454442211---01--------2----26875310-01222332222222222223467--64
Q gi|254780602|r 229 ER-TLVVNGVSKAYAMTGLRIGYAAG---AL--------S----LIKSMIVL-QGQQTSGACSIAQWAAVEALNGP--QD 289 (400)
Q Consensus 229 ~~-~i~~~S~SK~~~~~G~RiG~~v~---~~--------~----li~~l~~~-~~~~~~~~~~~~q~a~~~~l~~~--~~ 289 (400)
|. -|+..+..|++. |-|-|.+-- .+ + +-++++.. --..-.++-...-.+.+.+|... .+
T Consensus 241 ey~DiVTTTTHKsLR--GPRg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpe 318 (477)
T KOG2467 241 EYCDIVTTTTHKSLR--GPRGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPE 318 (477)
T ss_pred CCCCEEECCCCCCCC--CCCCEEEEEECCCCCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHH
T ss_conf 201246413434556--876316898326776787889764012665301222665568987335899999998607877
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCC
Q ss_conf 322222211000000024553047760330274--089986264102332113322489899999999873979983502
Q gi|254780602|r 290 FVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSS 367 (400)
Q Consensus 290 ~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~ 367 (400)
|- +-.+...+|...+.+.|.+. |.+... .| .-.+.+|+...- .| -.-+++.++..+|.+.--+.
T Consensus 319 fk-~Yq~qV~~Nakala~~l~~~-Gy~lvt-gGTDnHlvLvDLr~~G----------~d-GarvE~vle~~~I~~NKNtv 384 (477)
T KOG2467 319 FK-EYQKQVLKNAKALASALISR-GYKLVT-GGTDNHLVLVDLRPKG----------VD-GARVEKVLELCHIALNKNTV 384 (477)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHC-CCEEEC-CCCCCEEEEEECCCCC----------CC-HHHHHHHHHHHHHHHCCCCC
T ss_conf 99-99999999999999999972-966740-7866527999656467----------75-08999999875413337767
Q ss_pred CCC-----CCEEEEE
Q ss_conf 289-----9728999
Q gi|254780602|r 368 FGH-----GPSIRIS 377 (400)
Q Consensus 368 Fg~-----~~~iRis 377 (400)
||. ++.|||.
T Consensus 385 pGD~Sal~PgGiRiG 399 (477)
T KOG2467 385 PGDKSALSPGGIRIG 399 (477)
T ss_pred CCCCCCCCCCCEECC
T ss_conf 787445588843316
No 328
>KOG1402 consensus
Probab=98.15 E-value=2.3e-06 Score=58.80 Aligned_cols=221 Identities=15% Similarity=0.159 Sum_probs=126.7
Q ss_pred HHHHHHCCCCC-CCCCEEECCC-CCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCC-CCCC
Q ss_conf 03331000122-1220121135-42100001233-3321112233333201110122110000012233222111-2333
Q gi|254780602|r 153 SPEKLEQAITP-KTKWLFLNSP-SNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVE-PSLY 228 (400)
Q Consensus 153 d~~~l~~~i~~-~~k~i~l~nP-~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~-~~~~ 228 (400)
|.++|+.++.. +..++++ -| +--.|.+.++. -+++.-++| ++|++++|.||+-..+.-.|+ ++..+ ....
T Consensus 195 d~eale~~l~~~~vaaFiv-EPIQGEaGVvvP~~GYL~~vreLC-tkynvl~I~DEvQTGl~RTGk----~la~d~env~ 268 (427)
T KOG1402 195 DAEALEVALKSPNVAAFIV-EPIQGEAGVVVPPPGYLKKVRELC-TKYNVLLIADEVQTGLARTGK----LLACDYENVR 268 (427)
T ss_pred CHHHHHHHHCCCCEEEEEE-ECCCCCCCEEECCCHHHHHHHHHH-HHHCEEEEEHHHHHCCCCCCC----EEEEEHHHCC
T ss_conf 7799999862987568985-113466533728920678999998-751478882443425234674----7886543158
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 22574146544322344544422110122687531001222332222222222223467643222222110000000245
Q gi|254780602|r 229 ERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQ 308 (400)
Q Consensus 229 ~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~~~~~ 308 (400)
.. +++ +.|.++-.=+-+..+.++++++-.+.......+.+-+++...+++++|+--++ +++.+.-+.--+.+...
T Consensus 269 PD-ivi--lgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e--ekL~era~~lG~~l~~~ 343 (427)
T KOG1402 269 PD-IVI--LGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE--EKLVERAAKLGEILRDQ 343 (427)
T ss_pred CC-EEE--EECCCCCCEEEEEEEEECHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHH
T ss_conf 77-689--81113687045689985478986168775556568880888999999999999--78999999987999999
Q ss_pred HHCCC----C-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE--EECC
Q ss_conf 53047----7-603302740899862641023321133224898999999998739799835022899728999--6299
Q gi|254780602|r 309 LQGVP----G-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS--YAVS 381 (400)
Q Consensus 309 L~~~~----g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis--~~~~ 381 (400)
|++++ + ++..+.. |++.-+.+ .+......+.++.|..| ++.|++.-|-+ ++-||++ ++.+
T Consensus 344 L~~l~~~~p~~v~~VRGr-Gl~~ai~i-------~~~~~~~~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~ 410 (427)
T KOG1402 344 LNKLQKKFPHVVKEVRGR-GLLNAIVI-------NPSKTSGQDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVIS 410 (427)
T ss_pred HHHCCCCCCCHHHEEECC-CEEEEEEE-------CCCCCCCHHHHHHHHCC-CCCCCCCCCCC----CCEEEECCCCCCC
T ss_conf 985440256444334225-33788996-------15556646588888703-02561047778----8758746884357
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780602|r 382 DAILEEACVRIKRFCH 397 (400)
Q Consensus 382 ~e~l~~al~rl~~~l~ 397 (400)
+++++++++.|++.+.
T Consensus 411 e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402 411 EEDLREGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 8999889999999742
No 329
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=98.15 E-value=5.8e-07 Score=62.44 Aligned_cols=320 Identities=17% Similarity=0.186 Sum_probs=164.1
Q ss_pred CCCCHHHHHHHHHHHH-CCCCCCCC----------CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9889999999999983-88756998----------778989999999986421013333223323345433332222222
Q gi|254780602|r 43 FDMPENVKYAVVRAME-RGETKYTA----------VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT 111 (400)
Q Consensus 43 ~~~p~~i~~a~~~al~-~~~~~Y~~----------~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~ 111 (400)
.|..+.+.++|...+- ++.+|-|. ..-....|+.|++.. ..|+.+|++|+|+++.-.+++..+
T Consensus 13 ~P~~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~------~~d~~ei~ftsGate~~nl~i~G~ 86 (404)
T TIGR02006 13 TPVDKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELI------GADSREIVFTSGATESDNLAIKGV 86 (404)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH------CCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 86458999999998874156688642343345306889999999999984------588740787237753024788889
Q ss_pred C----CCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC
Q ss_conf 3----3223222233332322222---22222222222222223222103331000122122012113542100001233
Q gi|254780602|r 112 V----NMGDEVLIPRPYWVSYPDM---VALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQN 184 (400)
Q Consensus 112 ~----~~Gd~Vlv~~P~y~~y~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~ 184 (400)
. ++|..++...-..-..... .+..|..+.+++...++ .+|++.++++++++|-++-+..-||-.|.+-+
T Consensus 87 a~fy~~k~~h~it~~~ehk~vl~~~r~le~~G~~vtyl~~~~~G--~~~~~~l~~~~~~~t~lvs~m~vnne~G~~~~-- 162 (404)
T TIGR02006 87 AKFYKSKGKHIITSKTEHKAVLDTCRELEREGFEVTYLEVKEDG--LIDLEELKAAIRDDTILVSVMAVNNEIGVIQD-- 162 (404)
T ss_pred HHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCC--CEEHHHHHHHHHCCEEEEEEEEECCCCCHHHH--
T ss_conf 99974237667864003678999999887578168985014566--21089999874127057875531144330465--
Q ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE--CCCCCCCCCCCCCCCCCCCHHH--H-HH
Q ss_conf 33211122333332011101221100000122332221112333225741--4654432234454442211012--2-68
Q gi|254780602|r 185 RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVV--NGVSKAYAMTGLRIGYAAGALS--L-IK 259 (400)
Q Consensus 185 ~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~--~S~SK~~~~~G~RiG~~v~~~~--l-i~ 259 (400)
+.+|.++| |..+++.-.|.+-+. |+-...+ .+..+-+ -|-.|.||.-| +|.+..... + ++
T Consensus 163 -~~~i~~~~-r~~~~~fh~d~~q~~----Gk~~~~~-------~~~~~dl~s~s~hk~yGPkG--iGalyv~~~Prvr~~ 227 (404)
T TIGR02006 163 -IAAIGELC-RERKVLFHVDAAQSV----GKIPIDV-------EELKVDLMSISGHKIYGPKG--IGALYVRRKPRVRLE 227 (404)
T ss_pred -HHHHHHHH-HHCCEEEEEECCCCC----CCEEEEH-------HHHHHHHHHHCCCCCCCCCC--CCEEEEECCCCEEEE
T ss_conf -88999876-304414764000134----5113435-------34310121001231026755--212455127733552
Q ss_pred HHHHH----CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCC
Q ss_conf 75310----012223322222222-2222346764322222211000000024553047760330274089986264102
Q gi|254780602|r 260 SMIVL----QGQQTSGACSIAQWA-AVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLI 334 (400)
Q Consensus 260 ~l~~~----~~~~~~~~~~~~q~a-~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~ 334 (400)
.+..- +.. .++.-...|.. +-.++.-..+.+.+....+..-++.+.+.++.+..+.+.. ..- -.+....
T Consensus 228 ~~~~GGG~erG~-r~Gtl~~~~ivG~G~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~---~~~--~~~~~~l 301 (404)
T TIGR02006 228 ALIHGGGHERGM-RSGTLPTHQIVGLGEAFRIAKEELAKDTARVLKLRDRLLNGIESIEEVYLNG---DLE--QRVKGNL 301 (404)
T ss_pred EECCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---HHH--HHHHHHH
T ss_conf 000488743541-0244320143210167899999998889999999999999874456533121---144--3112221
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC--------------CCC-----CEEEEEEE--CCHHHHHHHHHHHH
Q ss_conf 3321133224898999999998739799835022--------------899-----72899962--99999999999999
Q gi|254780602|r 335 GKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF--------------GHG-----PSIRISYA--VSDAILEEACVRIK 393 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F--------------g~~-----~~iRis~~--~~~e~l~~al~rl~ 393 (400)
... ......+.+. +.=..+++..|+++ |.+ ..+|++++ +.+++++.+++.+.
T Consensus 302 ---n~s-f~~veGesl~---~a~~~~avssGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~ 374 (404)
T TIGR02006 302 ---NVS-FNYVEGESLI---MALKDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVK 374 (404)
T ss_pred ---EEE-EEEECHHHHH---HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
T ss_conf ---012-2200204788---888887530564100133535578876064201223222100111210789999999999
Q ss_pred HHHHHCC
Q ss_conf 9998609
Q gi|254780602|r 394 RFCHSLQ 400 (400)
Q Consensus 394 ~~l~~l~ 400 (400)
+.+++||
T Consensus 375 ~~~~~lr 381 (404)
T TIGR02006 375 SAVDKLR 381 (404)
T ss_pred HHHHHHH
T ss_conf 9999886
No 330
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.11 E-value=3.3e-05 Score=51.78 Aligned_cols=318 Identities=13% Similarity=0.166 Sum_probs=152.2
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHC----CC--CCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCC-CCCCCC-CCCCCC
Q ss_conf 66565897498899999999999838----87--56998-77898999999998642101333322-332334-543333
Q gi|254780602|r 34 LCLTAGEPDFDMPENVKYAVVRAMER----GE--TKYTA-VAGISPLREAIVEKFRRDNDLHYTSD-QIIVGT-GAKHVI 104 (400)
Q Consensus 34 i~l~~G~p~~~~p~~i~~a~~~al~~----~~--~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e-~I~it~-G~~~~l 104 (400)
+||+.|=. ..|+.|++.+++.+-+ |. .+-.. +.-..++-+..-+.+++..++ ..+ +|++.. |++...
T Consensus 1 ~NF~aGPa--~lp~~Vl~~~~~e~~~~~~~G~sile~SHRs~~f~~i~~~a~~~lr~Ll~i--Pd~Y~Vlfl~GGat~qf 76 (355)
T cd00611 1 INFSAGPA--ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI--PDNYKVLFLQGGATGQF 76 (355)
T ss_pred CCCCCCCC--CCCHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCC--CCCEEEEEECCCHHHHH
T ss_conf 96788876--589999999999975426886015512668878999999999999998489--99808999578449999
Q ss_pred CCCCCCCCCCCCCCCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCCCC--CCHHHHHHCCCCCCCCCEEECCCCCC-CCC
Q ss_conf 22222223322322223-3332322-2222222222222222222322--21033310001221220121135421-000
Q gi|254780602|r 105 FNALMATVNMGDEVLIP-RPYWVSY-PDMVALCGGIPVFVDTQQDDNF--QVSPEKLEQAITPKTKWLFLNSPSNP-SGV 179 (400)
Q Consensus 105 ~~~~~~~~~~Gd~Vlv~-~P~y~~y-~~~~~~~g~~~~~v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l~nP~NP-TG~ 179 (400)
..+.+.++.+++..... +=.|..- ..-++..|...+-....++.+| .|+.+.+. +++....+.+| +||- +|.
T Consensus 77 ~~ip~Nll~~~~~a~y~~tG~ws~ka~~eA~~~~~~~~i~~~~~~~~~~~iP~~~~~~--~~~~~~yvh~t-~NETi~Gv 153 (355)
T cd00611 77 AAVPLNLLGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWD--LAPDAAYVHYC-SNETIHGV 153 (355)
T ss_pred HHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCC--CCCCCCEEEEE-ECCCCCCE
T ss_conf 9999851478870589973726899999998746774103665667877689934327--88877779993-25775343
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 01233332111223333320111012211000001223322211123332257414654432234454442211012268
Q gi|254780602|r 180 VYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIK 259 (400)
Q Consensus 180 v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~ 259 (400)
-+. .+ .+..+..+|+|-. +++. ..+ . +..+-.++..|.-|.+|.+| +++++..+++++
T Consensus 154 ~~~-----~~----p~~~~~~lV~D~S-S~~~--s~~-i-------D~~~~d~iYagaQKnlGpaG--~tvvIir~~ll~ 211 (355)
T cd00611 154 EFD-----EV----PDTGGVPLVADMS-SNIL--SRP-I-------DVSKFGVIYAGAQKNLGPAG--VTVVIVRKDLLG 211 (355)
T ss_pred ECC-----CC----CCCCCCCEEEEEC-CHHC--CCC-C-------CHHHCCEEEEECCCCCCCCC--EEEEEECHHHHH
T ss_conf 446-----56----6778962787502-0540--867-6-------77892189987100156665--089998499971
Q ss_pred HHHHH-------CC----CCCCC-CCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE--EECCC
Q ss_conf 75310-------01----22233-2222222222---223467643222222110000000245530477603--30274
Q gi|254780602|r 260 SMIVL-------QG----QQTSG-ACSIAQWAAV---EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY--MIPDG 322 (400)
Q Consensus 260 ~l~~~-------~~----~~~~~-~~~~~q~a~~---~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~--~~p~g 322 (400)
+..+. +. ....+ ||++..+.+. +++. .+.-++.+.++-+++.+.+++.+.+-+++.. ..|+.
T Consensus 212 ~~~~~~P~~l~y~~~~~~~s~~NTPp~f~iy~~~lv~~Wl~-~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~ 290 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLK-EQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRA 290 (355)
T ss_pred HCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHH
T ss_conf 02446973200999985255557962799999999999988-76899999999999999999999858880117898233
Q ss_pred --CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHH
Q ss_conf --08998626410233211332248989999999987397998350228997289996--29999999999999999
Q gi|254780602|r 323 --AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRF 395 (400)
Q Consensus 323 --~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~ 395 (400)
-+-+-.++.+ ...+..|.... ++.|+.-.-|+. .-|.+|+|+ +.+.|.++.-++-|++|
T Consensus 291 RS~mnv~f~~~~-----------~~l~~~Fl~~a-~~~Gl~~lkGhR--svGg~RaS~ynA~~~e~V~aL~~fm~~f 353 (355)
T cd00611 291 RSRMNVPFRLGK-----------EELEKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred CCCCEEEEEECC-----------HHHHHHHHHHH-HHCCCCCCCCCC--CCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 587758998588-----------78899999999-987882556875--2235278850898999999999999997
No 331
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=98.11 E-value=5.6e-06 Score=56.46 Aligned_cols=328 Identities=19% Similarity=0.227 Sum_probs=183.1
Q ss_pred CCEEECCCCCCCC----CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9726656589749----889999999999983887569987789899999999864210133332233233454333322
Q gi|254780602|r 31 IDVLCLTAGEPDF----DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 31 ~~ii~l~~G~p~~----~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
+.|||- .|.|.| ...++|.++.+.+-+. .--..+|-+.--+|+.++.|. |+=-||+|++.|+.+
T Consensus 9 k~ViNa-~GkMTiLGvs~Vs~ev~~a~~~~~~~-------F~em~~ls~~tGe~~ar~lgv----EdayIts~AsAGia~ 76 (391)
T TIGR01437 9 KRVINA-IGKMTILGVSKVSDEVLEATKYVSDI-------FIEMDDLSRKTGEYIARRLGV----EDAYITSGASAGIAL 76 (391)
T ss_pred EEEEEC-CCCEEECCCCHHHHHHHHHHHHHHHH-------CEEHHHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHH
T ss_conf 036723-45213536640369999998756551-------010899999999999988443----067889878889999
Q ss_pred CCCCCCCCCC----------------CCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf 2222233223----------------2222333323222----2222222222222222223222103331000122122
Q gi|254780602|r 107 ALMATVNMGD----------------EVLIPRPYWVSYP----DMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTK 166 (400)
Q Consensus 107 ~~~~~~~~Gd----------------~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k 166 (400)
.+.+++..|+ +|+++.|-=..|. .++.+.|.+++.+ ..+| ..+.+.||..|+++|+
T Consensus 77 ~vAali~~g~~ar~~~~~i~e~g~~~~vv~~rgH~vdyg~PV~~~i~~gGg~ivE~--G~~n--~~s~~~lE~~I~~kt~ 152 (391)
T TIGR01437 77 AVAALISKGTRARVIKDIIEEKGRKREVVLQRGHNVDYGAPVEDLIALGGGRIVEV--GDEN--LVSEESLEETIKEKTA 152 (391)
T ss_pred HHHHHHCCCCCCEEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEE--CCCC--CCCHHHHHHHHHHHHH
T ss_conf 99997516763201101032033400678627874567880899996189948997--7888--7567899999977346
Q ss_pred CEEECCCC--CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 01211354--2100001233332111223333320111012211000001223322211123332257414654432234
Q gi|254780602|r 167 WLFLNSPS--NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 167 ~i~l~nP~--NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (400)
+|+.+--| -|-+...+.++ ++++ |+.|+++||+|.+ .++--.+ ....... .+ --++++|-.|.++
T Consensus 153 aiLyvksh~~vqk~ml~P~~~---~~~v-A~~~~vPlIVDAA-AeiPP~e-dL~~y~~--~G---aDlViYSGaKa~~-- 219 (391)
T TIGR01437 153 AILYVKSHHLVQKDMLLPVEE---VIRV-AQSYKVPLIVDAA-AEIPPEE-DLTRYLK--AG---ADLVIYSGAKALE-- 219 (391)
T ss_pred HHHHHHHHCCCCCCCCCCHHH---HHHH-HHHCCCCEEEECC-CCCCCHH-HHHHHHH--HC---CCEEEECCHHHCC--
T ss_conf 755565321357666663899---9999-9756898898625-6898801-4689997--16---8755532034504--
Q ss_pred CCC-CCCCCCHHHHHHHHHHHCCCC-CCCCC---CCCCCC--------------CCCCCCC-CCCCCCCCCCCCCCCCCC
Q ss_conf 454-442211012268753100122-23322---222222--------------2222346-764322222211000000
Q gi|254780602|r 245 GLR-IGYAAGALSLIKSMIVLQGQQ-TSGAC---SIAQWA--------------AVEALNG-PQDFVVNNRKIFEYRRDL 304 (400)
Q Consensus 245 G~R-iG~~v~~~~li~~l~~~~~~~-~~~~~---~~~q~a--------------~~~~l~~-~~~~~~~~~~~~~~~r~~ 304 (400)
|.- -|+++|-++.|.......... ..+|. .+..++ ...+|.+ .++|+.+++..+ +-
T Consensus 220 gpsnsGl~vGrK~~I~~~~~~g~gseenGPDGtrvfIgRaMKIgKe~ivg~v~AvE~yl~~~~e~~~~k~~~~l----~p 295 (391)
T TIGR01437 220 GPSNSGLVVGRKDYIAAAKSQGKGSEENGPDGTRVFIGRAMKIGKENIVGLVAAVERYLTFNDEDWLRKQRSRL----DP 295 (391)
T ss_pred CCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH----HH
T ss_conf 64326323300889999986288765668986568873265103689999999999985168726789999984----36
Q ss_pred HHHHHHCCCCCEE-EECC-CC---EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-CCCEEEEEE
Q ss_conf 0245530477603-3027-40---8998626410233211332248989999999987397998350228-997289996
Q gi|254780602|r 305 CVAQLQGVPGIRY-MIPD-GA---FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG-HGPSIRISY 378 (400)
Q Consensus 305 ~~~~L~~~~g~~~-~~p~-g~---~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg-~~~~iRis~ 378 (400)
+.+.+.++.++.. ..-+ || -=+|.- .-.....+...+..|.+.+| +...|.+..-+ |- .+|-+-+..
T Consensus 296 ~a~aIs~i~~l~a~iv~D~agnhPR~i~r~-----rV~v~~~~~Gl~A~eV~~~L-k~~~~aIYtr~-YQ~~~G~~~ldp 368 (391)
T TIGR01437 296 IAEAISDIDDLMAKIVQDEAGNHPRDIYRA-----RVKVDAEEGGLSADEVISRL-KAERVAIYTRE-YQLLDGVLELDP 368 (391)
T ss_pred HHHHHHHHHHCEEEEEECCCCCCCCCEEEE-----EEEEECCCCCCCHHHHHHHH-CCCCCCCHHHH-HHHHCCEEEECC
T ss_conf 999985241011235676889888543688-----88982222476789999985-07999500224-554488588766
Q ss_pred -ECCHHHHHHHHHHHHHHHHH
Q ss_conf -29999999999999999986
Q gi|254780602|r 379 -AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 379 -~~~~e~l~~al~rl~~~l~~ 398 (400)
+..++++..-++||.+-.+.
T Consensus 369 r~v~e~e~~~Iv~rL~eI~~~ 389 (391)
T TIGR01437 369 RSVKEDEMALIVDRLSEIVEK 389 (391)
T ss_pred CCCCCCCHHHHHHHHHHHHHH
T ss_conf 113614168999989999862
No 332
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=97.97 E-value=6e-05 Score=50.20 Aligned_cols=327 Identities=16% Similarity=0.240 Sum_probs=186.5
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-----CC----CCCC
Q ss_conf 99999999838875699877898999999998642101333322332334543333222222233-----22----3222
Q gi|254780602|r 49 VKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVN-----MG----DEVL 119 (400)
Q Consensus 49 i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~-----~G----d~Vl 119 (400)
+.+.+.-++-.|.-.|+.++-.-.|-++| +.-+|-++ -++|+=+..|=...+-.++. .| .-|.
T Consensus 55 ~~~~~~Aa~~~GDEAY~GSR~Yy~La~~V----~~~~GY~Y----TIPTHQGRGAEQI~~P~LI~~~~~~~G~~~~kmV~ 126 (468)
T TIGR02617 55 VTQRMQAAMMRGDEAYSGSRSYYALADKV----KEIFGYQY----TIPTHQGRGAEQIYIPVLIKKREAEKGLDRSKMVA 126 (468)
T ss_pred CCHHHHHHHHCCCCCCCCCHHHHHHHHHH----HHHCCCCC----CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 05466776423641021323589999997----66427311----36875788604456657888776625898552788
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCC--CCHHHHHHCCCCC----CCCCEEE-CCCCCCCCCCCCCCCC
Q ss_conf 2333323222222222222222222222------322--2103331000122----1220121-1354210000123333
Q gi|254780602|r 120 IPRPYWVSYPDMVALCGGIPVFVDTQQD------DNF--QVSPEKLEQAITP----KTKWLFL-NSPSNPSGVVYSQNRL 186 (400)
Q Consensus 120 v~~P~y~~y~~~~~~~g~~~~~v~~~~~------~~~--~~d~~~l~~~i~~----~~k~i~l-~nP~NPTG~v~s~~~l 186 (400)
+.+-.|..-..-.++.|++..-|-+.+. -+| ..|+|+||+.|.+ ++-.|+- ++-|.--|+=.|...+
T Consensus 127 ~SNyfFDTT~~H~~~Ng~~a~NV~~~~AFDT~~~~DfKG~FDl~~LE~~I~E~G~~NV~~Iv~TiTcNSaGGQPvSlANl 206 (468)
T TIGR02617 127 LSNYFFDTTQGHVQINGCKAKNVYTSEAFDTGVKYDFKGNFDLEELEKTIAEAGPDNVPYIVTTITCNSAGGQPVSLANL 206 (468)
T ss_pred EECCCCHHHHHHHHHCCCEEEEEEEECCCCCCEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHHHHHH
T ss_conf 73232011134443135237887752022343201335675778887887502856632777754316896842678888
Q ss_pred CCCCCCCCCCCCCEEECCCCCC----CCCC-C--CCCCCCCCCCCCCCCC--EEEEECCCCCCCCCCCCCCC-CCCC-HH
Q ss_conf 2111223333320111012211----0000-0--1223322211123332--25741465443223445444-2211-01
Q gi|254780602|r 187 RALADVLVRNPHVHIISDDIYE----HIVY-R--NCQFSNIVNVEPSLYE--RTLVVNGVSKAYAMTGLRIG-YAAG-AL 255 (400)
Q Consensus 187 ~~i~~~~a~~~~i~ii~De~Y~----~l~~-~--~~~~~s~~~~~~~~~~--~~i~~~S~SK~~~~~G~RiG-~~v~-~~ 255 (400)
+++.++ |++|||.||.|.+=. +|+- . +.+--|+-.+..+++. ..+.+ |.-|.--+ .+| .++- ++
T Consensus 207 KAvY~I-Ak~yDIPVv~DSARFaENAyFIkQRE~~Y~~~si~~I~~E~Y~YaD~L~M-SAKKD~~V---~~GGL~C~~Dd 281 (468)
T TIGR02617 207 KAVYEI-AKKYDIPVVMDSARFAENAYFIKQREKEYENWSIEQITREMYKYADMLAM-SAKKDALV---NMGGLLCFKDD 281 (468)
T ss_pred HHHHHH-HHHCCCCEEECCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH-HHCCCCCC---CCCCEEEECCC
T ss_conf 999999-86459986862302233457777533000033188988886542020110-10125400---04762552035
Q ss_pred HHHHHHHHHCCCCCCCCC-----CCCCC------CCCCCCCCC--CCCCCCCCCCCC-CCCCCHHHHHHCCCCCEEEECC
Q ss_conf 226875310012223322-----22222------222223467--643222222110-0000002455304776033027
Q gi|254780602|r 256 SLIKSMIVLQGQQTSGAC-----SIAQW------AAVEALNGP--QDFVVNNRKIFE-YRRDLCVAQLQGVPGIRYMIPD 321 (400)
Q Consensus 256 ~li~~l~~~~~~~~~~~~-----~~~q~------a~~~~l~~~--~~~~~~~~~~~~-~~r~~~~~~L~~~~g~~~~~p~ 321 (400)
.+.+-...++ +.|++ +.... +.+-.|.++ ++|+. || .+-+++.+.|+++ |+.+..|.
T Consensus 282 sf~D~y~E~R---T~CV~~EGF~TYGGL~G~~ME~LAvGL~~GM~~~~LA-----YRI~QV~YL~~~L~~~-Gv~~Q~P~ 352 (468)
T TIGR02617 282 SFFDVYTEVR---TLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNEDYLA-----YRINQVAYLVNGLEDI-GVVIQQPA 352 (468)
T ss_pred CHHHHHHCCC---CEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHH-----HHHHHHHHHHHHHHHC-CCEEECCC
T ss_conf 2245533312---2232146755557776045788875145300343277-----8899999998557667-80576499
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC-CCCC-CCC-------C----EEEEEE-----E-CCH
Q ss_conf 4089986264102332113322489899999999873979983-5022-899-------7----289996-----2-999
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ-GSSF-GHG-------P----SIRISY-----A-VSD 382 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p-G~~F-g~~-------~----~iRis~-----~-~~~ 382 (400)
||--+|+|...+.. +.|.. ......++.+|-.++||-.+- ||-. |-+ + -+|+++ + ...
T Consensus 353 GGHA~FVDA~~LLP-HIPa~--QFPA~AL~~ELY~~AGIRaVEIGSlLLGRDP~TGKQ~P~P~ELLRLTIPR~~YT~~HM 429 (468)
T TIGR02617 353 GGHAAFVDAGKLLP-HIPAD--QFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQKPCPAELLRLTIPRATYTQTHM 429 (468)
T ss_pred CCEEEEEECCCCCC-CCCCC--CCHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHCCHH
T ss_conf 86376763110278-88865--5548888555677617114531014216788787888870677640266201101124
Q ss_pred HHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999998609
Q gi|254780602|r 383 AILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 383 e~l~~al~rl~~~l~~l~ 400 (400)
|=+.||...+|+-+..+|
T Consensus 430 DfiiEAF~~~K~~~~~iK 447 (468)
T TIGR02617 430 DFIIEAFKSVKENAPNIK 447 (468)
T ss_pred HHHHHHHHHHHHHHHHCC
T ss_conf 789999999987543347
No 333
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.96 E-value=0.0001 Score=48.71 Aligned_cols=324 Identities=15% Similarity=0.136 Sum_probs=154.3
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCC-----CC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 97266565897498899999999999838-87569-----98-7789899999999864210133332233233454333
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMER-GETKY-----TA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~-~~~~Y-----~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~ 103 (400)
++.+||+.|-. ..|+.|++.+++.+-+ ..+|. .. +.-..++-+..-+.+++..+++-+- +|++..|+..+
T Consensus 3 ~~~~NF~aGPa--~LP~~Vl~~~~~e~~~~~~~G~simE~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y-~VlflqGGAt~ 79 (364)
T PRK12462 3 RNQLNFSGGPG--ALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAQADLRDLLGIPDEY-GVVFLQGGSSL 79 (364)
T ss_pred CCCCCCCCCCC--CCCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCHHH
T ss_conf 67621588864--4899999999999860568970278506688889999999999999985899982-79995681789
Q ss_pred -CCCCCCCCCCCCCCC--CCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHCCCCCCCCCEEECCCCC-
Q ss_conf -322222223322322--223333232--222222222222222222223222--103331000122122012113542-
Q gi|254780602|r 104 -IFNALMATVNMGDEV--LIPRPYWVS--YPDMVALCGGIPVFVDTQQDDNFQ--VSPEKLEQAITPKTKWLFLNSPSN- 175 (400)
Q Consensus 104 -l~~~~~~~~~~Gd~V--lv~~P~y~~--y~~~~~~~g~~~~~v~~~~~~~~~--~d~~~l~~~i~~~~k~i~l~nP~N- 175 (400)
...+-..++++++.. .+.+=.|.. +....+....+ .+...++.+|. |+.+++ .+.+++..+.+|+ ||
T Consensus 80 qf~~ip~Nll~~~~~~a~y~~tG~WS~kA~~EA~k~~~~~--~~~~~~~~~~~~iP~~~~~--~~~~~~~y~h~t~-NeT 154 (364)
T PRK12462 80 QFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMR--VVWDGAASGYRTLPSLAAL--DWDARAPFRHYVS-NET 154 (364)
T ss_pred HHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEE--EEECCCCCCCCCCCCHHHC--CCCCCCCEEEECC-CCC
T ss_conf 9999986375678852349962786899999999758914--8623566888646774322--7788844698625-774
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf 10000123333211122333332011101221100000122332221112333225741465443223445444221101
Q gi|254780602|r 176 PSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGAL 255 (400)
Q Consensus 176 PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 255 (400)
=+|..++ +..+ ..+..+|+|-. +++ .+..-+...-.++..|.-|.+|.+| +..++..+
T Consensus 155 i~Gvq~~-----~~~~----~~~~plV~DmS-S~~----------lsrpiD~s~~~viYagaQKN~G~aG--~tvvIir~ 212 (364)
T PRK12462 155 VEGLQFP-----DAAD----LPDSPLIADMS-SDF----------MSRPFDVRAYGMVYAHAQKNLGPAG--VTVAIIRR 212 (364)
T ss_pred CCCEEEC-----CCCC----CCCCEEEEECC-HHH----------HCCCCCHHHEEEEEEECCCCCCCCC--EEEEEECH
T ss_conf 2332415-----6789----99973887346-065----------1676567790389986211256666--18999879
Q ss_pred HHHHHHHH-------HCC----CCCC-CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE--E
Q ss_conf 22687531-------001----2223-32222222222---223467643222222110000000245530477603--3
Q gi|254780602|r 256 SLIKSMIV-------LQG----QQTS-GACSIAQWAAV---EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY--M 318 (400)
Q Consensus 256 ~li~~l~~-------~~~----~~~~-~~~~~~q~a~~---~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~--~ 318 (400)
+++++... ++. .... .|+++..+++. +++...-..++.+.++-+++.+.+++.+.+..++-. .
T Consensus 213 dll~~~~~~iP~~ldy~~~~~~~S~yNTPp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v 292 (364)
T PRK12462 213 ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHA 292 (364)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCC
T ss_conf 99616220386402188898608878894269999999999999862135589999999999999999971878766889
Q ss_pred ECC--CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHH
Q ss_conf 027--408998626410233211332248989999999987397998350228997289996--2999999999999999
Q gi|254780602|r 319 IPD--GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKR 394 (400)
Q Consensus 319 ~p~--g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~ 394 (400)
.++ ..+-+-..+. ....+..|.... ++.|+.-.-|+.- =|.+|+|+ +.+.|.++.-++=|++
T Consensus 293 ~~~~RS~mNv~F~~~-----------~~~l~~~Fl~~a-~~~Gl~~lkGhRs--vGG~RaSlYNa~~~e~V~~L~~fM~~ 358 (364)
T PRK12462 293 HRAARSTMNVAFRFR-----------QPRLDTLFKEQS-TEAGFCGLSGHRS--IGGIRASLYNAVSEQAVSRLCAFLKD 358 (364)
T ss_pred CCCCCCCEEEEEECC-----------CHHHHHHHHHHH-HHCCCCCCCCCCC--CCCCEEECCCCCCHHHHHHHHHHHHH
T ss_conf 846588588468149-----------766789999999-9879866518871--14526771179999999999999999
Q ss_pred HHHH
Q ss_conf 9986
Q gi|254780602|r 395 FCHS 398 (400)
Q Consensus 395 ~l~~ 398 (400)
|-.+
T Consensus 359 F~~~ 362 (364)
T PRK12462 359 FAIR 362 (364)
T ss_pred HHHH
T ss_conf 9985
No 334
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=97.79 E-value=3.5e-05 Score=51.65 Aligned_cols=262 Identities=20% Similarity=0.196 Sum_probs=154.8
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCCCCCCCHHHH-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 26656589749889999999999983887-5699877898999-999998642101333322332334543333222222
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYTAVAGISPLR-EAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMA 110 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR-~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~ 110 (400)
|++-.+|---| .+.+.+++.++++... +-|.--.|--.-| ..|++++.+..| ..+..++.|-+.. ..+++.+
T Consensus 69 vLnTnlGra~~--ae~v~~a~~~~~~~~v~LEY~L~~~gRG~R~~~i~~lLc~lTg---ae~~cvvnNna~a-vlL~l~~ 142 (448)
T TIGR00474 69 VLNTNLGRALF--AEAVNEAISEAMRKYVNLEYDLDEGGRGHRDAHIEKLLCKLTG---AEDACVVNNNAAA-VLLMLAT 142 (448)
T ss_pred EEEHHHCCHHH--HHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHCC---CCCCEEEECHHHH-HHHHHHH
T ss_conf 65300144367--9999999999862577531102115753178999999875328---6233044233899-9999999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCC--CCCCCC
Q ss_conf 23322322223333232222222------2222222222222232221033310001221220121135421--000012
Q gi|254780602|r 111 TVNMGDEVLIPRPYWVSYPDMVA------LCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNP--SGVVYS 182 (400)
Q Consensus 111 ~~~~Gd~Vlv~~P~y~~y~~~~~------~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NP--TG~v~s 182 (400)
+. .|-+||+..|-=+.+.++.+ ..|+....|=.... --..+.+.+|+++|-.+..++-+|= .|.+-.
T Consensus 143 ~a-~GKeVi~srGEL~eiGg~fRipdim~~~g~~l~eVGttn~----t~~~Dy~~ai~~nTa~Lmkvh~sNf~~~gft~~ 217 (448)
T TIGR00474 143 LA-KGKEVIISRGELVEIGGAFRIPDIMKQAGCELDEVGTTNR----THVKDYRVAITENTALLMKVHLSNFKIVGFTAK 217 (448)
T ss_pred HC-CCCEEEEECCCCCCCCCCCCCHHHHHHCCCEEEECCCHHH----HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_conf 60-7987999788657898756544889653856510110120----004467776531034444443016625652111
Q ss_pred CCCCCCCCCCCCCCCCCEEECCCCCCCCC--------CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 33332111223333320111012211000--------0012233222111233322574146544322344544422110
Q gi|254780602|r 183 QNRLRALADVLVRNPHVHIISDDIYEHIV--------YRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 183 ~~~l~~i~~~~a~~~~i~ii~De~Y~~l~--------~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
. ..++|+++ =++.|+.++.|+.=+.|+ ++++.+....+. + --++..|.-|-+ -|-|-|-+||-
T Consensus 218 ~-~eeeLv~L-G~~~~~pv~~D~gSG~LvdL~~~gL~~~eP~~~~~i~~--G---~dLVs~SgDKLL--gGpqaGiivGK 288 (448)
T TIGR00474 218 V-KEEELVKL-GKELDVPVVTDLGSGLLVDLSQYGLPKNEPNVQEAIAL--G---VDLVSFSGDKLL--GGPQAGIIVGK 288 (448)
T ss_pred C-CHHHHHHH-HHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHC--C---CCEEECCCCCCC--CCCCCCEEECC
T ss_conf 5-77899973-22337707998776621225441666688971068866--9---857861651004--67650346230
Q ss_pred HHHHHHHHHHCCCCCCCC--CCCCC-CCCCCCCCCCCCCCCCCC---------CCCCCCCCCHHHHHHCCCC
Q ss_conf 122687531001222332--22222-222222346764322222---------2110000000245530477
Q gi|254780602|r 255 LSLIKSMIVLQGQQTSGA--CSIAQ-WAAVEALNGPQDFVVNNR---------KIFEYRRDLCVAQLQGVPG 314 (400)
Q Consensus 255 ~~li~~l~~~~~~~~~~~--~~~~q-~a~~~~l~~~~~~~~~~~---------~~~~~~r~~~~~~L~~~~g 314 (400)
+++|+++..---....-+ ..++. .+++..+.+++...++.+ +..+.+.+.+.+.|+.++|
T Consensus 289 Keli~ki~~~p~kr~Lr~dk~~LAGle~tLkly~~PEkl~E~ip~lr~ltr~~~~~~~~a~rL~~~L~~~~~ 360 (448)
T TIGR00474 289 KELIEKIQIHPLKRALRADKLTLAGLEATLKLYLNPEKLLEKIPTLRLLTRAKKFLRIKAERLEKELKAIDG 360 (448)
T ss_pred HHHHHHHHHCCCCEEHHCCHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 789999854786221012416799999999741580243044215565303488999999998887503568
No 335
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=97.78 E-value=0.0011 Score=42.41 Aligned_cols=319 Identities=18% Similarity=0.239 Sum_probs=156.3
Q ss_pred HHHHHHHHHHHHCCC-----CCCCCCCCCHHHHHHH--HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC----
Q ss_conf 999999999983887-----5699877898999999--99864210133332233233454333322222223-32----
Q gi|254780602|r 47 ENVKYAVVRAMERGE-----TKYTAVAGISPLREAI--VEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV-NM---- 114 (400)
Q Consensus 47 ~~i~~a~~~al~~~~-----~~Y~~~~G~~~lR~ai--a~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~-~~---- 114 (400)
....|++...+..+. .+++.+.|-...-.|| |+.|. | -.+|+-.+|+-+|+..-.++++ |.
T Consensus 85 ~~F~~~l~~~~~~~r~~~Y~l~F~GP~GA~a~EaA~KLA~~~T---G----R~~visF~~GfHGMT~GaLa~TGN~~~~N 157 (445)
T TIGR00709 85 DAFIEALLNILPKPRKEDYKLQFPGPSGADAVEAAIKLAKTYT---G----RTNVISFSGGFHGMTIGALALTGNLFAKN 157 (445)
T ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCC---C----CCEEEEECCCCCHHHHHHHHHHCCCHHHC
T ss_conf 7899999997068877631787188898535789999743117---8----70047633885101221366522420001
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCH-------HHHHHCCCCCCCCCEEECCCCCCCCCC-CCCCC
Q ss_conf 23222233332322222222-2222222222222322210-------333100012212201211354210000-12333
Q gi|254780602|r 115 GDEVLIPRPYWVSYPDMVAL-CGGIPVFVDTQQDDNFQVS-------PEKLEQAITPKTKWLFLNSPSNPSGVV-YSQNR 185 (400)
Q Consensus 115 Gd~Vlv~~P~y~~y~~~~~~-~g~~~~~v~~~~~~~~~~d-------~~~l~~~i~~~~k~i~l~nP~NPTG~v-~s~~~ 185 (400)
+-..+++.-.+-+|.+..+- .| +.-|.|-.-. +|+.++-+ .|+-+++|-.=+==-|.+ -|.+.
T Consensus 158 a~~~~~~~~~~~PY~~~~~~P~G-------~GGeaG~~~~~~Y~ENF~~~~~SG~-~KPAA~I~E~iQGEGG~~~A~~~w 229 (445)
T TIGR00709 158 AVEMLLPGVQFLPYPHEYRCPLG-------LGGEAGSNAVIEYFENFIEDVESGV-DKPAAVILEAIQGEGGVVAAPVEW 229 (445)
T ss_pred CCCCCCCCCCCCCCCHHHCCCCC-------CCCHHHHHHHHHHHHHHHHCCCCCC-CCCEEEEEEEEECCCCCCHHHHHH
T ss_conf 24556777622788423247666-------7703446789999877541366776-576046886330788510224799
Q ss_pred CCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC--CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 32111223333320111012211000001223322--2111233322574146544322344544422110122687531
Q gi|254780602|r 186 LRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNI--VNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 186 l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~--~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
|++|-++| ++++|.+|.||+-..+.=.|. +-++ +.+.|+ +++ +||+.|--|+-++.+...+++ +++.-
T Consensus 230 L~~i~~v~-~~~~I~lIlD~VQAG~~R~G~-~FaFE~AGI~PD-----~v~--~SKavGGng~PLAv~~i~~~f-D~~~P 299 (445)
T TIGR00709 230 LQKIREVT-RKHDIKLILDEVQAGFGRSGK-MFAFEHAGIEPD-----VVV--LSKAVGGNGLPLAVLLIKKEF-DAWQP 299 (445)
T ss_pred HHHHHHHH-HHCCCEEEEECCCCCCCCCCC-CEEECCCCCCCC-----EEE--EECCCCCCCHHHHHHHHHHHC-CCCCC
T ss_conf 99999987-427847998223457012555-110024789867-----689--830338885068887763430-45688
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHH----HCCCCCEEEE-CCCCEEEEEECCCCCCCC
Q ss_conf 001222332222222222223467-6432222221100000002455----3047760330-274089986264102332
Q gi|254780602|r 264 LQGQQTSGACSIAQWAAVEALNGP-QDFVVNNRKIFEYRRDLCVAQL----QGVPGIRYMI-PDGAFYLYPSCQDLIGKK 337 (400)
Q Consensus 264 ~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L----~~~~g~~~~~-p~g~~y~~~~~~~~~~~~ 337 (400)
.-...++.-+.+...-...+|+.. ++-++++.+ +|-+++...| ++.|.+.-++ .. ||..=+++.+-....
T Consensus 300 a~H~GTFRGN~lA~~TG~~~L~~~kd~~L~~N~Q---E~~E~~t~~L~~~~K~~P~~~~VRkGR-GlM~Gi~~~~E~~~~ 375 (445)
T TIGR00709 300 AGHTGTFRGNQLAMVTGLEALNIIKDDNLAQNAQ---ERGERITSFLDDLIKEYPCIGNVRKGR-GLMIGIEIVDERKSK 375 (445)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCCCC-CEEECCCCCCCCCCC
T ss_conf 9866554301578888899999888766765554---446789999999987378547620566-335413210257742
Q ss_pred CCCCCCCCCHHHHHHHHHH---HCCEEEECCCCCCCC-CEEEEEE--ECCHHHHHHHHHHHHHHHHH
Q ss_conf 1133224898999999998---739799835022899-7289996--29999999999999999986
Q gi|254780602|r 338 SPSGDVIRTDLDFVNGLLE---IEKVAVVQGSSFGHG-PSIRISY--AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~Ll~---~~gV~v~pG~~Fg~~-~~iRis~--~~~~e~l~~al~rl~~~l~~ 398 (400)
+..+....| .+++..+.. ++++++--| |.+ .=||+-+ ..+.+++++.+.|+++.++.
T Consensus 376 D~~G~~P~D-~~LA~~I~~~CF~~~LllE~~---G~~~~V~~ll~p~~I~~~~~~~~~~~~~~av~e 438 (445)
T TIGR00709 376 DAIGAYPAD-SELAAAIQGACFENGLLLEKG---GREGEVVRLLCPITIDQEELEEVISRLKQAVEE 438 (445)
T ss_pred CCCCCCCCH-HHHHHHHHHHHHCCCCEEEEC---CCCCCEEEEECCEEECHHHHHHHHHHHHHHHHH
T ss_conf 224788621-489999986322057334306---899736897066032456689999999999999
No 336
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=97.77 E-value=0.00047 Score=44.74 Aligned_cols=324 Identities=14% Similarity=0.129 Sum_probs=152.2
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCC-----CC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-CCCC
Q ss_conf 7266565897498899999999999838-87569-----98-778989999999986421013333223323345-4333
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMER-GETKY-----TA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTG-AKHV 103 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~-~~~~Y-----~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G-~~~~ 103 (400)
.++||+.|-. ..|+.|++.+++.+-+ ...|. .. +.-..++-+..-+.+++..+++=+- +|++..| ++.-
T Consensus 3 r~~NF~aGPa--~LP~~Vl~~~~~e~~~~~g~G~silEiSHRs~~f~~i~~~a~~~lr~Ll~iPd~Y-eVlflqGGat~q 79 (360)
T PRK05355 3 RVYNFSAGPA--MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFIAVAEEAEADLRELLNIPDNY-KVLFLQGGASLQ 79 (360)
T ss_pred CCCCCCCCCC--CCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCHHHH
T ss_conf 8511788854--3899999999999860258886057545588889999999999999984899981-899957845899
Q ss_pred CCCCCCCCCCCCCCCCCCC-CCCCC--CCCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHCCCCCCCCCEEECCCCC-CC
Q ss_conf 3222222233223222233-33232--222222222222222222223222--103331000122122012113542-10
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPR-PYWVS--YPDMVALCGGIPVFVDTQQDDNFQ--VSPEKLEQAITPKTKWLFLNSPSN-PS 177 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~-P~y~~--y~~~~~~~g~~~~~v~~~~~~~~~--~d~~~l~~~i~~~~k~i~l~nP~N-PT 177 (400)
...+...++.+++..-... =.|.. +..+ ...| .+..+-..++.+|. |+.++. .+.+...-+.+|+ || =+
T Consensus 80 F~~ip~Nll~~~~~a~y~~tG~Ws~KA~~EA-~~~~-~~~v~~~~~~~~~~~iP~~~~~--~~~~~~~Y~h~t~-NETi~ 154 (360)
T PRK05355 80 FAMVPLNLLGKGGKADYVVTGSWSKKAIKEA-KKYG-EVNVAASSEDDGFTYIPPLDEW--QLSDDAAYVHYTP-NETID 154 (360)
T ss_pred HHHHHHHCCCCCCEEEEEECCHHHHHHHHHH-HHHC-CCCEECCCCCCCCCCCCCHHHC--CCCCCCCEEEECC-CCCCC
T ss_conf 9999874678898023895388899999973-7616-8732013466777558986652--7797756799714-77501
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 00012333321112233333201110122110000012233222111233322574146544322344544422110122
Q gi|254780602|r 178 GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSL 257 (400)
Q Consensus 178 G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~l 257 (400)
|..+.. +- +..++.+|+|-. +++. ..+ . +..+-.++..|.-|.+|.+| +..++..+++
T Consensus 155 Gv~~~~-----~P----~~~~~pLV~DmS-S~~l--srp-i-------D~~~~d~iYagaQKNlGpaG--vtvvIvr~~l 212 (360)
T PRK05355 155 GTEIHE-----LP----DTGDVPLVADMS-SDIL--SRP-I-------DVSKFGLIYAGAQKNIGPAG--LTIVIVREDL 212 (360)
T ss_pred CEEECC-----CC----CCCCCCEEEECC-CCCC--CCC-C-------CHHHCCEEEEECCCCCCCCC--CEEEEEEHHH
T ss_conf 046101-----36----668984799734-5434--776-7-------77891579987433578765--1899975999
Q ss_pred HHHHHH-------HCC----CCCC-CCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE-ECC
Q ss_conf 687531-------001----2223-32222222222---2234676432222221100000002455304776033-027
Q gi|254780602|r 258 IKSMIV-------LQG----QQTS-GACSIAQWAAV---EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM-IPD 321 (400)
Q Consensus 258 i~~l~~-------~~~----~~~~-~~~~~~q~a~~---~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~-~p~ 321 (400)
+++-.+ ++. .... .|+.+..+++. +|+. .+.-++.+.++-+++.+.+++.+.+.+-.+.. .|+
T Consensus 213 l~~~~~~iP~~l~y~~~~~~~Sl~NTPp~f~iy~~~lvl~Wl~-~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v~~~ 291 (360)
T PRK05355 213 LGRALPNIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLK-EQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPVAPE 291 (360)
T ss_pred HHCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 6223668960530999986367666884289999999999998-617699999999998999999986078635889856
Q ss_pred CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHHHH
Q ss_conf 408998626410233211332248989999999987397998350228997289996--29999999999999999986
Q gi|254780602|r 322 GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 322 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l~~ 398 (400)
.....+..... .....+..|... +++.|+.-.-|+. .-|.+|+|+ +.+.|.++.-++=|++|-++
T Consensus 292 --------~RS~mNV~F~~-~~~~l~~~Fl~~-a~~~Gl~~LkGhR--svGG~RaSlYNa~~~e~V~~L~~fm~~F~~~ 358 (360)
T PRK05355 292 --------NRSRMNVPFTL-ADEELDKKFLAE-AEAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFEKR 358 (360)
T ss_pred --------HCCCCEEEEEC-CCHHHHHHHHHH-HHHCCCCCCCCCC--CCCCEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf --------56865447871-877789999999-9987986666876--5385278801799999999999999999996
No 337
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.76 E-value=8.1e-05 Score=49.39 Aligned_cols=275 Identities=18% Similarity=0.187 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCC--CCCCCCCCCHHHH----HHHHHH---HHHHCCC
Q ss_conf 9999999999869972665-6589749889999999999983887--5699877898999----999998---6421013
Q gi|254780602|r 18 VAAQRVRDLRSKGIDVLCL-TAGEPDFDMPENVKYAVVRAMERGE--TKYTAVAGISPLR----EAIVEK---FRRDNDL 87 (400)
Q Consensus 18 ~~~~~~~~~~~~g~~ii~l-~~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR----~aia~~---~~~~~g~ 87 (400)
++..+.++..+++++..+| +.|-=+.-+|+.|...+. +++. +.|+|-| ||.- |++-+| .....|+
T Consensus 61 e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnil---e~pewyTaYTPYQ--pEISQGrLqaLfefQtlv~dLTGm 135 (450)
T COG0403 61 EALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNIL---ENPEWYTAYTPYQ--PEISQGRLEALFEFQTLVADLTGL 135 (450)
T ss_pred HHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHHHHHHH---CCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999987066145425686468718278888764---3854223678886--366657999999899999998588
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHCCCC
Q ss_conf 333223323-3454333322222223322322223333232222222----22222222222222322210333100012
Q gi|254780602|r 88 HYTSDQIIV-GTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA----LCGGIPVFVDTQQDDNFQVSPEKLEQAIT 162 (400)
Q Consensus 88 ~~~~e~I~i-t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i~ 162 (400)
++......= .+.+.+|+.++.+.--.+..+++|+.-.+|.+....+ -.|.+++.++.+ |.++++++..
T Consensus 136 ~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~ 208 (450)
T COG0403 136 DVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADD 208 (450)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCC-------HHHHHHHCCC
T ss_conf 744500231676999999999874147673499668868779999986112576399995642-------2556653246
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
..+-++++-+|+ -.|. ...++++|.+.+ +.++.++++ +.+.. .-.++. .|+-+.--|++++.. .||
T Consensus 209 ~~~~gv~vQyP~-~~G~--~~~d~~~l~~~~-h~~~al~~v---~aDpl-----aL~LL~-pPGe~GADIvvG~~Q-rfG 274 (450)
T COG0403 209 GDVFGVLVQYPN-TFGI--VEEDLRALIEAA-HSAGALVIV---AADPL-----ALGLLK-PPGEFGADIVVGSAQ-RFG 274 (450)
T ss_pred CCEEEEEEECCC-CCCC--CCHHHHHHHHHH-HHCCCEEEE---EECHH-----HHHCCC-CCCCCCCCEEEECCC-CCC
T ss_conf 773799997688-8773--414099999998-635977999---82636-----764557-841037866973376-047
Q ss_pred CC----CCCCCCCCCHHHHHHHHH----------------------------HHCCCCCCCCCCCCCC--CCCCCCCCCC
Q ss_conf 34----454442211012268753----------------------------1001222332222222--2222234676
Q gi|254780602|r 243 MT----GLRIGYAAGALSLIKSMI----------------------------VLQGQQTSGACSIAQW--AAVEALNGPQ 288 (400)
Q Consensus 243 ~~----G~RiG~~v~~~~li~~l~----------------------------~~~~~~~~~~~~~~q~--a~~~~l~~~~ 288 (400)
+| |-.+||....+++.+++- +-+...++|.+-..-. ++..+--++.
T Consensus 275 vPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp 354 (450)
T COG0403 275 VPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGP 354 (450)
T ss_pred CCCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCH
T ss_conf 77678875632223758674259984330464589980320128778888764001015548999999999999998696
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHCCC-CCEEE
Q ss_conf 4322222211000000024553047-76033
Q gi|254780602|r 289 DFVVNNRKIFEYRRDLCVAQLQGVP-GIRYM 318 (400)
Q Consensus 289 ~~~~~~~~~~~~~r~~~~~~L~~~~-g~~~~ 318 (400)
+-+.++..+..+...++.+.|+++. |+++.
T Consensus 355 ~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~ 385 (450)
T COG0403 355 QGLKEIAERIHRLAAYLAAGLKEIGAGVELV 385 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 8899999999999999999876458864751
No 338
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.75 E-value=0.00048 Score=44.69 Aligned_cols=328 Identities=13% Similarity=0.095 Sum_probs=152.5
Q ss_pred HHHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCC-C-CCCCCCCCCHHHH----HHHHHH---HHHHC
Q ss_conf 999999999999869972665-658974988999999999998388-7-5699877898999----999998---64210
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCL-TAGEPDFDMPENVKYAVVRAMERG-E-TKYTAVAGISPLR----EAIVEK---FRRDN 85 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l-~~G~p~~~~p~~i~~a~~~al~~~-~-~~Y~~~~G~~~lR----~aia~~---~~~~~ 85 (400)
-.++.+..+++.++++..-+| +.|.-+.-+|+.|+..+. +++ . +.|+|-| ||.- |++-+| .....
T Consensus 63 E~e~l~~l~~ia~kN~~~~sfIG~Gyy~t~tP~vI~Rnvl---enp~wyTaYTPYQ--pEISQGrLeaL~nfQTmi~dLT 137 (954)
T PRK12566 63 EQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVL---ENPGWYTAYTPYQ--PEIAQGRLEALLNFQQMTIDLT 137 (954)
T ss_pred HHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCHHHHHHHH---CCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999997378642230177678847567777530---4887504779986--4676699999999999999987
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 13333223323-34543333222222233223222233332322222222222222222222232221033310001221
Q gi|254780602|r 86 DLHYTSDQIIV-GTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK 164 (400)
Q Consensus 86 g~~~~~e~I~i-t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~ 164 (400)
|+++.--.++= .+-+.+|+.++.+.--++.++++|..-.+|.+...++. .+++..+.+.. -+++++ ....
T Consensus 138 Gm~vaNASllDeaTAaAEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~t-ra~~~gie~vv-----~~~~~~---~~~~ 208 (954)
T PRK12566 138 GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLKT-RAEGFGFELVV-----DEVDNL---AQHA 208 (954)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHH-CCCCCCCEEEE-----CCHHHC---CCCC
T ss_conf 87600576000899999999998987536888799889878889999996-03357957996-----386766---7667
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 2201211354210000123333211122333332011101-221100000122332221112333225741465443223
Q gi|254780602|r 165 TKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD-DIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 165 ~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D-e~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+-++++-+| |-.|.+.+ +..+++.+ +..+.+++.. |. +...--+ + |+-..--|+++|. -.||+
T Consensus 209 ~~gvlvqyP-~~~G~i~d---~~~~~~~a-h~~gal~iv~~D~---laL~lLk--~-----PGe~GADIavG~~-QrfGv 272 (954)
T PRK12566 209 VFGALLQYP-DTHGEVRD---LRPLIDQL-HGQQALACVAADL---LSLLLLT--P-----PGELGADVVLGST-QRFGV 272 (954)
T ss_pred EEEEEEECC-CCCCCCCC---CHHHHHHH-HHCCCEEEEEHHH---HHHHCCC--C-----HHHCCCCEEEEEC-CCCCC
T ss_conf 589999789-98876147---56789877-3459289986567---6877049--8-----3441875798406-63676
Q ss_pred C----CCCCCCCCCHHHHHHHH----------------------------HHHCCCCCCCCCCCCCC--CCCCCCCCCCC
Q ss_conf 4----45444221101226875----------------------------31001222332222222--22222346764
Q gi|254780602|r 244 T----GLRIGYAAGALSLIKSM----------------------------IVLQGQQTSGACSIAQW--AAVEALNGPQD 289 (400)
Q Consensus 244 ~----G~RiG~~v~~~~li~~l----------------------------~~~~~~~~~~~~~~~q~--a~~~~l~~~~~ 289 (400)
| |-..||+...+++.+.+ ++-+....+|.+-..-. ++..+.-++.+
T Consensus 273 PmgfGGPhagffAtr~~~kR~mPGRiVGvS~D~~G~~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamYAvYHGPe 352 (954)
T PRK12566 273 PMGYGGPHAAFFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPE 352 (954)
T ss_pred CCCCCCCCEEEEEEHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHH
T ss_conf 55678875023357244653599743403777997951322133689999862010000277899999999999871999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC
Q ss_conf 32222221100000002455304776033027408998626410233211332248989999999987397998350228
Q gi|254780602|r 290 FVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFG 369 (400)
Q Consensus 290 ~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg 369 (400)
-+.+..++.......+.+.|+.. |+++. ...||=-+.+.. .....++..+ ..+.|+-+.- -
T Consensus 353 GLk~IA~rih~~a~~la~~L~~~-G~~v~--~~~fFDTl~v~~-----------~~~~~~i~~~-A~~~~iNlR~----~ 413 (954)
T PRK12566 353 GLKRIAQRVHRLTAILAAGLEAK-GIKRL--NRHFFDTLTLEV-----------GGAQAAIIES-AEAAQINLRI----L 413 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHC-CCEEC--CCCEEEEEEEEC-----------CCCHHHHHHH-HHHCCCEEEE----E
T ss_conf 99999999999999999999877-97125--786156799964-----------8649999999-9977974787----1
Q ss_pred CCCEEEEEEE--CCHHHHHHHHHHH
Q ss_conf 9972899962--9999999999999
Q gi|254780602|r 370 HGPSIRISYA--VSDAILEEACVRI 392 (400)
Q Consensus 370 ~~~~iRis~~--~~~e~l~~al~rl 392 (400)
.++.|.||+. ++.+++..-+..+
T Consensus 414 d~~~vgISlDEttt~~dl~~Ll~vF 438 (954)
T PRK12566 414 GRGRLGLSLDETCDEATVARLFDIF 438 (954)
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf 6997999805668899999999998
No 339
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.0014 Score=41.91 Aligned_cols=333 Identities=16% Similarity=0.145 Sum_probs=158.5
Q ss_pred HHHHHCCCCEEECCCCCCCCCCCHHHHHHHHH-HHH---CCCC-CCC-CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99998699726656589749889999999999-983---8875-699-87789899999999864210133332233233
Q gi|254780602|r 24 RDLRSKGIDVLCLTAGEPDFDMPENVKYAVVR-AME---RGET-KYT-AVAGISPLREAIVEKFRRDNDLHYTSDQIIVG 97 (400)
Q Consensus 24 ~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~-al~---~~~~-~Y~-~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it 97 (400)
++.-..-.+||-|.-..-.. .|+.+..+..+ +.+ ++.- ... .......+-+.+.+.+....| ..+.+++++
T Consensus 23 r~~f~lp~~viyLdgnSLGa-~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiG--A~~~Evvv~ 99 (407)
T COG3844 23 RDRFALPGGVIYLDGNSLGA-RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIG--ARAGEVVVT 99 (407)
T ss_pred HHHCCCCCCEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHC--CCCCCEEEE
T ss_conf 75225999838960642346-865779999999999987433543202588632253677777644316--887846972
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCCCCC-CCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEE
Q ss_conf 4543333222222233--223222233-33232----2222222222222222222232221033310001221220121
Q gi|254780602|r 98 TGAKHVIFNALMATVN--MGDEVLIPR-PYWVS----YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFL 170 (400)
Q Consensus 98 ~G~~~~l~~~~~~~~~--~Gd~Vlv~~-P~y~~----y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l 170 (400)
++++--|+.++.+... +|+.||+++ -+||. .+..++..|.. ++ -...++++++++++++.+.+++|
T Consensus 100 dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~----~~~~~~P~~~~~~~~dd~AvV~L 172 (407)
T COG3844 100 DTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YD----LEGVIAPRALEEAITDDVAVVLL 172 (407)
T ss_pred CCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCHHHHHCCC---CC----CEEEECHHHHHHHHCCCEEEEEE
T ss_conf 785167999999984667885599645888885134312366661565---45----13432727788750465579984
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC-CCCCCCC
Q ss_conf 135421000012333321112233333201110122110000012233222111233322574146544322-3445444
Q gi|254780602|r 171 NSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA-MTGLRIG 249 (400)
Q Consensus 171 ~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~-~~G~RiG 249 (400)
++-+-=||..++- .+|-.+ +.+++++++.|=+|+-=.++ .. +.. ..--+-+++--|.++ -||---|
T Consensus 173 ~~V~y~TGql~dm---~aiT~~-AH~~galv~wDLAHsaGavp----~~---Lh~--~gaDfaigcsyKYLNgGPGapa~ 239 (407)
T COG3844 173 SHVNYKTGQLLDM---RAITAL-AHQHGALVGWDLAHSAGAVP----VD---LHA--AGADFAIGCSYKYLNGGPGAPAG 239 (407)
T ss_pred CCCCCCCCCEEEH---HHHHHH-HHHCCCEEEEEHHCCCCCCC----EE---ECC--CCCCEEEEEECEECCCCCCCCEE
T ss_conf 5634443412238---899998-87458647762011257765----11---034--67874410100002579997206
Q ss_pred CCCCHHHHHHHHHH-----------------------HCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCC----
Q ss_conf 22110122687531-----------------------001222332222222222223467643222-22211000----
Q gi|254780602|r 250 YAAGALSLIKSMIV-----------------------LQGQQTSGACSIAQWAAVEALNGPQDFVVN-NRKIFEYR---- 301 (400)
Q Consensus 250 ~~v~~~~li~~l~~-----------------------~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~-~~~~~~~~---- 301 (400)
+-..+...+.... ......+.++. ....+|+...+...+ ....++++
T Consensus 240 -l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V----~s~aal~~aLDifa~~~i~~lR~kSlaL 314 (407)
T COG3844 240 -LFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPV----LSLAALEGALDIFADVDITELRKKSLAL 314 (407)
T ss_pred -EEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCH----HHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf -88610224544453334357788501232037676510122078226----5667774013465533789998765678
Q ss_pred CCCHHHHHHC-C--CCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE
Q ss_conf 0000245530-4--776033027408998626410233211332248989999999987397998350228997289996
Q gi|254780602|r 302 RDLCVAQLQG-V--PGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY 378 (400)
Q Consensus 302 r~~~~~~L~~-~--~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~ 378 (400)
-+++++.++. . .++++..|... .--+ ... .-.........+.| .++||.. +|-.++-+|+.|
T Consensus 315 Td~fieLvEa~~~~~~l~l~tPr~~--------~~rG-sqv-S~~hp~~~~V~qaL-i~rGVig----D~R~P~vlRfgf 379 (407)
T COG3844 315 TDYFIELVEARCEYYGLTLVTPRAH--------EERG-SQV-SLYHPHGYQVMQAL-IDRGVIG----DFREPDVLRFGF 379 (407)
T ss_pred HHHHHHHHHHCCCCCCCEEECCCHH--------HHCC-CEE-EEECCCHHHHHHHH-HHCCCCC----CCCCCCEEEECC
T ss_conf 9999999884156677178466135--------4336-603-57368689999999-9738413----356887356427
Q ss_pred E---CCHHHHHHHHHHHHHHHHHC
Q ss_conf 2---99999999999999999860
Q gi|254780602|r 379 A---VSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 379 ~---~~~e~l~~al~rl~~~l~~l 399 (400)
+ .+-.++-.|++.|.+.++++
T Consensus 380 tPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 380 TPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred CCCEECHHHHHHHHHHHHHHHHHH
T ss_conf 531111658999999999999752
No 340
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.55 E-value=0.00095 Score=42.88 Aligned_cols=325 Identities=12% Similarity=-0.018 Sum_probs=139.8
Q ss_pred ECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCCCCCCCCCCCC
Q ss_conf 656589749889999999999983887569987789899999999864210133332233233-4543333222222233
Q gi|254780602|r 35 CLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVG-TGAKHVIFNALMATVN 113 (400)
Q Consensus 35 ~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it-~G~~~~l~~~~~~~~~ 113 (400)
+|+-| |.--.|.+..+++...+-+-.|+=.+ ..++-+..-..+++..+++=+. +|++. .|++....++...++.
T Consensus 15 ~F~~G-Ps~~~p~~~l~~l~~sile~SHRs~~---f~~i~~~a~~~lr~Ll~iPddY-~Vlfl~GGaT~qf~~i~~nLl~ 89 (381)
T PRK03080 15 RFSSG-PCKKRPGWSLDALADALLGRSHRQAP---GKAKLGEAIDGTRELLSLPADY-EVGIVPGSDTGAVEMALWSLLG 89 (381)
T ss_pred CCCCC-CCCCCCHHHHHHHCCCHHCCCCCCHH---HHHHHHHHHHHHHHHHCCCCCC-EEEEECCCHHHHHHHHHHHCCC
T ss_conf 96888-83888102166615311127627738---9999999999999995899984-7999678467999999874557
Q ss_pred CCC-CCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCC--CCCCCCCCCCCC
Q ss_conf 223-222233332322--222222222222222222232221033310001221220121135421--000012333321
Q gi|254780602|r 114 MGD-EVLIPRPYWVSY--PDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNP--SGVVYSQNRLRA 188 (400)
Q Consensus 114 ~Gd-~Vlv~~P~y~~y--~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NP--TG~v~s~~~l~~ 188 (400)
++. ..++ .=.|..- ..+.+.....-+.+ ...+-+..||+..+.. ... ++++ ||= +|+.++..+
T Consensus 90 ~~~~~~~~-~G~fs~kwa~~a~~~~~~~~~~v-~~a~~g~iP~~~~~~~----~~d-~~~t--~NeTi~Gv~~p~~~--- 157 (381)
T PRK03080 90 ARRVDHLA-WESFGAKWATDVVKQLKLEDPRV-LKADYGELPDLSAVDF----DVD-VVFT--WNGTTSGVRVPNAD--- 157 (381)
T ss_pred CCCCCEEE-ECCHHHHHHHHHHHHHCCCCCEE-EECCCCCCCCHHHCCC----CCC-EEEE--ECCCEEEEECCCCC---
T ss_conf 77772787-43144699999997436676158-7057777888123376----564-7987--35640108746767---
Q ss_pred CCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHC---
Q ss_conf 11223333320111012211000001223322211123332257414654432234454442211012268753100---
Q gi|254780602|r 189 LADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQ--- 265 (400)
Q Consensus 189 i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~--- 265 (400)
+.....+.++|+|-. +.+ .+..-+..+-.++..|.=|.+|.|| -++.++..++.++++....
T Consensus 158 ---~~~~~~~~llv~D~S-S~i----------~s~~iD~sk~dviyagaQKnlG~~a-Gl~vvI~sp~al~r~~~~~~~r 222 (381)
T PRK03080 158 ---WIGADREGLTICDAT-SAA----------FALPLDWAKLDVYTFSWQKVLGGEG-GHGMLILSPRAVERLESYAPAW 222 (381)
T ss_pred ---CCCCCCCCCEEEECH-HHH----------CCCCCCHHHCCEEEEEECCCCCCCC-CEEEEEECHHHHHHHHHCCCCC
T ss_conf ---788888862787432-444----------3676785574279987000257877-4279997699998886138877
Q ss_pred ---------C----------CCCCCCCC-CCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE--EC
Q ss_conf ---------1----------22233222-222222---22234676432222221100000002455304776033--02
Q gi|254780602|r 266 ---------G----------QQTSGACS-IAQWAA---VEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYM--IP 320 (400)
Q Consensus 266 ---------~----------~~~~~~~~-~~q~a~---~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~--~p 320 (400)
. ..+.+.|+ +.-+.+ ++++. .+.-++.+.++-+++.+.+++.+.+.+.+... .|
T Consensus 223 ~iP~~l~~~~~~~a~e~~~~~s~~NTPp~f~iy~~~~~l~Wl~-~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~ 301 (381)
T PRK03080 223 PLPKIFRLTKGGKLIENIFKGQTINTPSMLTVEDYLDQLDWAK-SIGGLDALIARTAANSSVLYDWAEKTPWATPLAADP 301 (381)
T ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 8844642455788876465346489961899999999999999-728899999999999999999997088743366884
Q ss_pred C--CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHH
Q ss_conf 7--4089986264102332113322489899999999873979983502289972899962--99999999999999999
Q gi|254780602|r 321 D--GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYA--VSDAILEEACVRIKRFC 396 (400)
Q Consensus 321 ~--g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~--~~~e~l~~al~rl~~~l 396 (400)
+ ..+-+-+++.+.. .....-+..+...+.++.|+.=.-|+.= ..|.+|+++. .+.+.++.-+.-|.=..
T Consensus 302 ~~RS~~nv~f~~~d~~------~~~~~~~~~~~~~l~~e~g~~di~ghR~-~~~GlR~s~y~av~~~dv~aL~~~ld~~~ 374 (381)
T PRK03080 302 ATRSNTSVCLDFVDPA------DAQAAFDKALVAKLLRENGAVDIGPYRD-APNGLRIWCGATVEPSDVEALTPWLDWAF 374 (381)
T ss_pred HHCCCCEEEEEECCCH------HHHHHHHHHHHHHHHHHCCEECCCCCCC-CCCCEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 4523764899945805------5479999999999998298745655356-89855888327789999999999999999
Q ss_pred HHC
Q ss_conf 860
Q gi|254780602|r 397 HSL 399 (400)
Q Consensus 397 ~~l 399 (400)
+++
T Consensus 375 ~~~ 377 (381)
T PRK03080 375 ERL 377 (381)
T ss_pred HHH
T ss_conf 998
No 341
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.42 E-value=0.0022 Score=40.65 Aligned_cols=326 Identities=13% Similarity=0.103 Sum_probs=150.7
Q ss_pred CEEECCCCCCCCCCCHHHHHHHHHHHHCCC-CCCC-----C-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCCCCC
Q ss_conf 726656589749889999999999983887-5699-----8-7789899999999864210133332233233-454333
Q gi|254780602|r 32 DVLCLTAGEPDFDMPENVKYAVVRAMERGE-TKYT-----A-VAGISPLREAIVEKFRRDNDLHYTSDQIIVG-TGAKHV 103 (400)
Q Consensus 32 ~ii~l~~G~p~~~~p~~i~~a~~~al~~~~-~~Y~-----~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it-~G~~~~ 103 (400)
.+.+|+.| |. ..|+.+++.+.+-+.+-. .|++ + +.-..++-+..-+.++..++++-+- +|++. .|++..
T Consensus 5 ~~~nFsaG-Pa-~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y-~VlflqGGat~q 81 (365)
T COG1932 5 RVYNFSAG-PA-ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDY-KVLFLQGGATGQ 81 (365)
T ss_pred CCCCCCCC-CC-CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCC-EEEEECCCCHHH
T ss_conf 78887888-52-4898999999998863416786301221333888999999999899995799874-699974853789
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCC-CCCCCCCCC--CCHHHHHHCCCCCCCCCEEECCCCC-CCC
Q ss_conf 32222222332232222333323222-222222222222-222222322--2103331000122122012113542-100
Q gi|254780602|r 104 IFNALMATVNMGDEVLIPRPYWVSYP-DMVALCGGIPVF-VDTQQDDNF--QVSPEKLEQAITPKTKWLFLNSPSN-PSG 178 (400)
Q Consensus 104 l~~~~~~~~~~Gd~Vlv~~P~y~~y~-~~~~~~g~~~~~-v~~~~~~~~--~~d~~~l~~~i~~~~k~i~l~nP~N-PTG 178 (400)
..++...++.+...--+-.=.|.... ..++..+-.+.- .+...+.+| .|+++..+ +.++..-+.+| +|| =+|
T Consensus 82 f~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~-~NeTi~G 158 (365)
T COG1932 82 FAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFC-WNETISG 158 (365)
T ss_pred HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHCC--CCCCCCEEEEE-CCCCCCC
T ss_conf 99888864213575057662145768999998645653123200026766799822146--67775579993-4886121
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00123333211122333332011101221100000122332221112333225741465443223445444221101226
Q gi|254780602|r 179 VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLI 258 (400)
Q Consensus 179 ~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li 258 (400)
.-++. . ..+.. +..+++|-. +. +.+..-+...--++..|.-|.+|..| ++.++..++++
T Consensus 159 v~v~~--~----p~~~~--~~~~v~D~S-S~----------ilsr~iDvsk~dviyagaQKnlGpaG--ltvvIvr~~~l 217 (365)
T COG1932 159 VEVPE--L----PDIGS--DGLLVADAS-SA----------ILSRPIDVSKYDVIYAGAQKNLGPAG--LTVVIVRPDLL 217 (365)
T ss_pred EECCC--C----CCCCC--CCEEEEECC-CH----------HHCCCCCHHHCCEEEEEHHHCCCCCC--EEEEEECHHHH
T ss_conf 57168--8----98887--760899656-27----------75577775671358876211257655--39999868997
Q ss_pred HHHHHHC--------C----CCCCC-CCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEE-EECC
Q ss_conf 8753100--------1----22233-2222222222---223467643222222110000000245530477603-3027
Q gi|254780602|r 259 KSMIVLQ--------G----QQTSG-ACSIAQWAAV---EALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRY-MIPD 321 (400)
Q Consensus 259 ~~l~~~~--------~----~~~~~-~~~~~q~a~~---~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~-~~p~ 321 (400)
+++.... . ..+.+ ||++.-+... .++. .+.-++.+.++-+++.+.+++.+.+-+-.+. ..|+
T Consensus 218 ~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk-~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~ 296 (365)
T COG1932 218 ERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLK-SQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKA 296 (365)
T ss_pred HCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 0113568961764312110488427848999999999999999-749999999988998999999987277533445521
Q ss_pred --CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHHH
Q ss_conf --408998626410233211332248989999999987397998350228997289996--2999999999999999998
Q gi|254780602|r 322 --GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 322 --g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l~ 397 (400)
.-+-+-.++. ...-+..|... ++++|+...-|+. ..+.+|+++ +.+.|.++.=++-|+.|.+
T Consensus 297 ~RS~mnV~f~~~-----------~~~ld~~fv~e-ae~~gl~~lkGhr--~vgGmRasiynA~~~e~veaL~~fm~~f~~ 362 (365)
T COG1932 297 NRSRMNVTFTLV-----------DAELDKGFVAE-AEAAGLIYLKGHR--SVGGLRASIYNAVPLEDVEALTDFMDWFEE 362 (365)
T ss_pred HCCCEEEEEECC-----------CHHHHHHHHHH-HHHCCCCEECCCC--CCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 215326898727-----------37777999999-9973774102664--778616654357788999999999999998
Q ss_pred HC
Q ss_conf 60
Q gi|254780602|r 398 SL 399 (400)
Q Consensus 398 ~l 399 (400)
..
T Consensus 363 ~~ 364 (365)
T COG1932 363 TY 364 (365)
T ss_pred HH
T ss_conf 60
No 342
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.21 E-value=0.0018 Score=41.26 Aligned_cols=324 Identities=14% Similarity=0.108 Sum_probs=147.8
Q ss_pred HHHHHHHHHHHHCCCCEEEC-CCCCCCCCCCHHHHHHHHHHHHCCC--CCCCCCCCCHHHH----HHHHHH---HHHHCC
Q ss_conf 99999999999869972665-6589749889999999999983887--5699877898999----999998---642101
Q gi|254780602|r 17 LVAAQRVRDLRSKGIDVLCL-TAGEPDFDMPENVKYAVVRAMERGE--TKYTAVAGISPLR----EAIVEK---FRRDND 86 (400)
Q Consensus 17 ~~~~~~~~~~~~~g~~ii~l-~~G~p~~~~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR----~aia~~---~~~~~g 86 (400)
.++.+..+++.++++..-+| +.|.-+.-+|+.|+.- .++++. +.|+|-| ||.- |++-+| .....|
T Consensus 65 ~e~l~~l~~ia~kN~~~~sfIG~Gyy~t~~P~VI~Rn---ilenp~WYTaYTPYQ--pEiSQGrLeal~nfQtmi~dLTG 139 (955)
T PRK05367 65 AEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRN---VLENPAWYTAYTPYQ--PEISQGRLEALLNFQTMVCDLTG 139 (955)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC---CCCCCCCCCCCCCCC--HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999973885301034776687575200204---535888645779976--57766899999999999999868
Q ss_pred CCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHCCC
Q ss_conf 3333223323-3454333322222223322322223333232222222----2222222222222232221033310001
Q gi|254780602|r 87 LHYTSDQIIV-GTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVA----LCGGIPVFVDTQQDDNFQVSPEKLEQAI 161 (400)
Q Consensus 87 ~~~~~e~I~i-t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~----~~g~~~~~v~~~~~~~~~~d~~~l~~~i 161 (400)
+++.--.++= .+-+.+|+.++.+..-+....++|..-.+|.+...++ -.|.+++..+. ++. ..
T Consensus 140 m~vaNASllDeaTAaaEAm~ma~r~~k~k~~~~~V~~~~~Pqt~~Vl~Tra~~~giei~v~d~----------~~~--~~ 207 (955)
T PRK05367 140 LPIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVVRTRAEPLGIEVVVGDA----------AEA--LD 207 (955)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECH----------HHC--CC
T ss_conf 760043210189999999999988622688879988987863899999605357977999575----------656--77
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 221220121135421000012333321112233333201110-1221100000122332221112333225741465443
Q gi|254780602|r 162 TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIIS-DDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 162 ~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~-De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
.+.+-++++-+|+ -.|.+.+ +..+++.+ ++.+.++|+ =|.-+ |+. -+ + |+-..--|+++|. -.
T Consensus 208 ~~d~~gvlvQyP~-~~G~i~D---~~~~~~~a-h~~gal~iv~~D~la-L~l--Lk--p-----PGe~GADIaVGs~-Qr 271 (955)
T PRK05367 208 HDDVFGVLLQYPG-TSGEVRD---YRALIAAA-HAAGALVAVAADLLA-LTL--LT--P-----PGEMGADIAVGSA-QR 271 (955)
T ss_pred CCCEEEEEEECCC-CCCCCCC---HHHHHHHH-HHCCCEEEEECCHHH-HHC--CC--C-----HHHCCCCEEEECC-CC
T ss_conf 6777999997899-8887178---79999999-765978999746667-752--38--9-----6663876797316-66
Q ss_pred CCC----CCCCCCCCCCHHHHHHHH----------------------------HHHCCCCCCCCCCCCCC--CCCCCCCC
Q ss_conf 223----445444221101226875----------------------------31001222332222222--22222346
Q gi|254780602|r 241 YAM----TGLRIGYAAGALSLIKSM----------------------------IVLQGQQTSGACSIAQW--AAVEALNG 286 (400)
Q Consensus 241 ~~~----~G~RiG~~v~~~~li~~l----------------------------~~~~~~~~~~~~~~~q~--a~~~~l~~ 286 (400)
||+ .|-..||+...+++.+.+ ++-+....+|.+-..-. ++..+.-+
T Consensus 272 fGvPmgfGGPhagffA~~~~~~R~mPGRiVG~S~D~~G~~ayrlaLQTREQHIRReKATSNICTaQaLLA~mA~~YAvYH 351 (955)
T PRK05367 272 FGVPMGFGGPHAAYFATRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYH 351 (955)
T ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 67776678865378886366415899753403665896975553001489998765201011477899999998896300
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC
Q ss_conf 76432222221100000002455304776033027408998626410233211332248989999999987397998350
Q gi|254780602|r 287 PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGS 366 (400)
Q Consensus 287 ~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~ 366 (400)
+.+-+.+..++.......+.+.|+.. |+++. ...||=-+.+.- ..+..++.. ...+.||.+.-
T Consensus 352 GP~GLk~IA~rih~~a~~la~~l~~~-G~~v~--~~~fFDTl~v~~-----------~~~a~~i~~-~A~~~giNlr~-- 414 (955)
T PRK05367 352 GPEGLKAIARRVHRLTAILAAGLKAL-GFKLV--HDSFFDTLTVEV-----------GGDAAAILA-RALAAGINLRR-- 414 (955)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCC--CCCCEEEEEEEC-----------CCCHHHHHH-HHHHCCCEEEE--
T ss_conf 89999999999999999999999978-98445--787102799965-----------855999999-99976972898--
Q ss_pred CCCCCCEEEEEEE--CCHHHHHHHHHHH
Q ss_conf 2289972899962--9999999999999
Q gi|254780602|r 367 SFGHGPSIRISYA--VSDAILEEACVRI 392 (400)
Q Consensus 367 ~Fg~~~~iRis~~--~~~e~l~~al~rl 392 (400)
..++.|.|||- ++.+++..-++-+
T Consensus 415 --~d~~~v~iSlDEttt~~dl~~l~~~f 440 (955)
T PRK05367 415 --VDDDAVGISLDETTTREDVAALLSVF 440 (955)
T ss_pred --ECCCEEEEEECCCCCHHHHHHHHHHH
T ss_conf --36996999935879999999999997
No 343
>KOG0628 consensus
Probab=97.11 E-value=0.014 Score=35.84 Aligned_cols=81 Identities=17% Similarity=0.222 Sum_probs=55.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC-CCCE---EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC
Q ss_conf 2222222222222222222232221033310001221-2201---21135421000012333321112233333201110
Q gi|254780602|r 128 YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPK-TKWL---FLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIIS 203 (400)
Q Consensus 128 y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~-~k~i---~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~ 203 (400)
.+..+..+|.+...++.++ +|.++.+.|+++|.+. .+++ ++|- +==|..+.+-+++.+|..+|.+ +++|+-+
T Consensus 195 veka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~a-t~GTT~~ca~D~l~elg~Vc~~-~glWLHV 270 (511)
T KOG0628 195 VEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCA-TLGTTSSCAFDELEELGPVCRE-EGLWLHV 270 (511)
T ss_pred HHHHHHHCCEEEEEEECCC--CCCCCHHHHHHHHHHHHHCCCCCEEEEE-EECCCCCCCCCCHHHHCCHHHH-CCEEEEE
T ss_conf 8876744002688851366--7677879999999999867986579998-4057655555418774103522-6878996
Q ss_pred CCCCCCCCC
Q ss_conf 122110000
Q gi|254780602|r 204 DDIYEHIVY 212 (400)
Q Consensus 204 De~Y~~l~~ 212 (400)
|.+|+.-.|
T Consensus 271 DAAYAGsa~ 279 (511)
T KOG0628 271 DAAYAGSAF 279 (511)
T ss_pred EHHHCCCCC
T ss_conf 345315431
No 344
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=97.00 E-value=0.00048 Score=44.70 Aligned_cols=160 Identities=16% Similarity=0.244 Sum_probs=99.0
Q ss_pred CCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC---CCCCCCCCCC-CCC--CC--CCCCCCCCCCCCC
Q ss_conf 56998---778989999999986421013333223323345433---3322222223-322--32--2223333232222
Q gi|254780602|r 62 TKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH---VIFNALMATV-NMG--DE--VLIPRPYWVSYPD 130 (400)
Q Consensus 62 ~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~---~l~~~~~~~~-~~G--d~--Vlv~~P~y~~y~~ 130 (400)
|-..| ++|+.+|-..+.+|+-+-.|-| .=-+=+-+|+|. ||. +++... .+| .+ =|+|.=.-...+.
T Consensus 538 HPF~P~~Q~eGY~~lia~Le~wL~~iTGfD--aislQPNsGaQGEYaGL~-vIR~YheSrgE~hRniCLIP~SAHGTNPA 614 (965)
T TIGR00461 538 HPFAPSEQVEGYQELIAQLEKWLVEITGFD--AISLQPNSGAQGEYAGLR-VIRSYHESRGEEHRNICLIPVSAHGTNPA 614 (965)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHCCCCC--CEECCCCCCCHHHHHHHH-HHHHHHHHCCCCCCCEEECCCCCCCCCHH
T ss_conf 878885022589999999988752105766--244178888446678899-99998760588987445307776788728
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC---CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 2222222222222222232221033310001---2212201211354210000123333211122333332011101221
Q gi|254780602|r 131 MVALCGGIPVFVDTQQDDNFQVSPEKLEQAI---TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 131 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i---~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
.+.++|.++|+|.|+.+++ +|+.+|+++- .++-.+|+++.|+ |=-|| .+.++.+||+. .+.+=-| |
T Consensus 615 SA~MaGm~VVpV~Cd~~Gn--iDl~DL~~KAEq~gd~Laa~MvTYPS--ThGvf-E~tI~~~~diV-H~FGGqV-----Y 683 (965)
T TIGR00461 615 SAAMAGMQVVPVKCDKDGN--IDLVDLKAKAEQYGDELAAVMVTYPS--THGVF-EETIREVCDIV-HRFGGQV-----Y 683 (965)
T ss_pred HHHHCCCEEEEEEECCCCC--EEHHHHHHHHHHCCCCEEEEEEECCC--CCCCC-HHHHCCEEEEE-ECCCCEE-----E
T ss_conf 9961698689876569995--00777788887506652567750587--76643-22210013114-4268847-----5
Q ss_pred CCCCCCCCCC------CCCCCCCCCCCCEEEEECCCCCCCCCC
Q ss_conf 1000001223------322211123332257414654432234
Q gi|254780602|r 208 EHIVYRNCQF------SNIVNVEPSLYERTLVVNGVSKAYAMT 244 (400)
Q Consensus 208 ~~l~~~~~~~------~s~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (400)
.||... ++...+- -.|-+++ +.|||+.|
T Consensus 684 ----lDGANMNAQVGltsPgd~G----ADVcHLN-LHKTFcIP 717 (965)
T TIGR00461 684 ----LDGANMNAQVGLTSPGDLG----ADVCHLN-LHKTFCIP 717 (965)
T ss_pred ----ECCCCCCCCCCCCCCCCCC----CCHHHHH-CCCCEECC
T ss_conf ----2456642233667861105----6343430-54420126
No 345
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=96.83 E-value=0.0004 Score=45.15 Aligned_cols=301 Identities=16% Similarity=0.151 Sum_probs=141.9
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-CCCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9999999864210133332233233454333322-222223--32232-2223333232222222222222222222223
Q gi|254780602|r 73 LREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFN-ALMATV--NMGDE-VLIPRPYWVSYPDMVALCGGIPVFVDTQQDD 148 (400)
Q Consensus 73 lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~-~~~~~~--~~Gd~-Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~ 148 (400)
|-..+...+-+..|+. +....++++-++. +.+ +++.+. .|..+ |+.+.-.=-.-...+..+|.+++-++...++
T Consensus 57 LTn~l~~d~lr~~G~~-s~~~~~vvP~aTG-Msl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AGl~p~vVe~~~~~ 134 (389)
T pfam05889 57 LTNELVKDFLKLLGLR-EVKNCFVVPLATG-MSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAGFEPRLVETVLDG 134 (389)
T ss_pred HHHHHHHHHHHHCCCC-CCCCEEEECCCCC-HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEEECC
T ss_conf 9999999999982974-3165789504104-7999999998558899789986355522689999769714887525228
Q ss_pred C-CCCHHHHHHCCCCCC-CC--CEEECCCCCCCCCCCC---CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 2-221033310001221-22--0121135421000012---333321112233333201110122110000012233222
Q gi|254780602|r 149 N-FQVSPEKLEQAITPK-TK--WLFLNSPSNPSGVVYS---QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIV 221 (400)
Q Consensus 149 ~-~~~d~~~l~~~i~~~-~k--~i~l~nP~NPTG~v~s---~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~ 221 (400)
+ ..-|.+++++++.+. .+ +-++++ .+++. .+++.+|+++|. ++|+.-|...+|.--. .......
T Consensus 135 d~l~Td~~~ie~~i~~~g~~~ilcVlsT-----TScFaPR~pD~v~~IAklC~-~~~IpHvVNnAYGlQ~---~~~~~~i 205 (389)
T pfam05889 135 DYLITDVNDVETIIEEKGEEVILAVLST-----TSCFAPRSPDNVKEIAKICA-EYDVPHLVNGAYGIQS---EETIRLI 205 (389)
T ss_pred CEEECCHHHHHHHHHHHCCCCEEEEEEC-----CCCCCCCCCCCHHHHHHHHH-HCCCCEEECCHHHHHH---HHHHHHH
T ss_conf 8243589999999998387766899844-----66569999667999999999-7499747843036617---9999999
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCCCCC-CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 1112333225741465443223445444-2211--012268753100122233222222222222346764322222211
Q gi|254780602|r 222 NVEPSLYERTLVVNGVSKAYAMTGLRIG-YAAG--ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIF 298 (400)
Q Consensus 222 ~~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~--~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~ 298 (400)
.-.-....--.++.|.-|.|-+| +| .+++ ++++++.+.+.-.-..+. ++.-...+..|.-+.+-..+..+.-
T Consensus 206 ~~a~r~GRVDa~VQStDKNflVP---VGGaIIas~d~~~i~~is~~YPGRAS~--sp~lDlfITLLslG~~gy~~Ll~eR 280 (389)
T pfam05889 206 AAAHECGRVDAVVQSLDKNFIVP---VGGAIIAAFDESFIQEISEEYPGRASA--RPSKDKLITLLSLGCKAYLALMKEQ 280 (389)
T ss_pred HHHHHCCCCEEEEEECCCCEEEE---CCCEEEEECCHHHHHHHHHCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99986388218997068662553---487489708889999998418997777--4079999999997488899999999
Q ss_pred CCCCCCHHHHHHCC---CCCEEEE-CCC--CEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCEEEEC-CCCCC
Q ss_conf 00000002455304---7760330-274--08998626410233211332248989999999987--3979983-50228
Q gi|254780602|r 299 EYRRDLCVAQLQGV---PGIRYMI-PDG--AFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEI--EKVAVVQ-GSSFG 369 (400)
Q Consensus 299 ~~~r~~~~~~L~~~---~g~~~~~-p~g--~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~--~gV~v~p-G~~Fg 369 (400)
++.+.++.+.|+++ -|-++.. |.- ++.+ .+..+.. ....+-.++...|..+ .|.-+++ +..|+
T Consensus 281 ke~~~~l~e~L~~~a~~~ge~lL~t~~N~IS~ai--tl~~l~~------~~~~~~t~lgs~Lf~r~VsG~RvV~~~~~~~ 352 (389)
T pfam05889 281 KEMFPLLRELLKDLAEEVGEQLLDVPHNPISSAM--TLETLDE------ISKKGRTDLGSELFSRRVTGARVVRSSDPFG 352 (389)
T ss_pred HHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEE--ECCCCCC------CCCCCHHHHHHHHHHCCCCCCEEECCCCCCC
T ss_conf 9999999999999999829875138999516888--7345566------6755499999999756787651665688853
Q ss_pred -------CCCEEEE--EEECCHHHHHHHHHHHHHHHH
Q ss_conf -------9972899--962999999999999999998
Q gi|254780602|r 370 -------HGPSIRI--SYAVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 370 -------~~~~iRi--s~~~~~e~l~~al~rl~~~l~ 397 (400)
+.+|+-+ +++...++++..++||.+-++
T Consensus 353 ~~~~~~y~~~Ylt~aaaiG~~~~dVd~f~~rL~k~l~ 389 (389)
T pfam05889 353 TIEGCEYHGRYLNIASAIGMKDEDVDYVIERLDEILE 389 (389)
T ss_pred EEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 4616768836789998708868999999999998529
No 346
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=96.61 E-value=0.00027 Score=46.21 Aligned_cols=298 Identities=16% Similarity=0.150 Sum_probs=141.5
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCCCCCCCC--CCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999986421013333223323345433-3322222223--32232-22233332322222222222222222222232
Q gi|254780602|r 74 REAIVEKFRRDNDLHYTSDQIIVGTGAKH-VIFNALMATV--NMGDE-VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDN 149 (400)
Q Consensus 74 R~aia~~~~~~~g~~~~~e~I~it~G~~~-~l~~~~~~~~--~~Gd~-Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~ 149 (400)
-..+...+-+..|+. +....++++-++. .|.+++.++- .|+.+ ||.+.-.=-.-...+..+|.+++.++...+++
T Consensus 107 Tn~l~ld~lr~~G~~-s~~~~~vvP~ATGMsL~LcL~alr~~rp~a~yViw~RiDQKSc~K~i~~AGl~pivie~~l~gd 185 (444)
T TIGR03531 107 TNKLVKDFLKLLGLR-SVKSAIVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGLEPRVIETVLDGD 185 (444)
T ss_pred HHHHHHHHHHHCCCC-CCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEEECCC
T ss_conf 999999999983985-3265799625345189999999850188998899853555326889986597279974075188
Q ss_pred -CCCHHHHHHCCCCCC-C-CCE-EECCCCCCCCCCCC---CCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf -221033310001221-2-201-21135421000012---3333211122333332011101221100000122332221
Q gi|254780602|r 150 -FQVSPEKLEQAITPK-T-KWL-FLNSPSNPSGVVYS---QNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVN 222 (400)
Q Consensus 150 -~~~d~~~l~~~i~~~-~-k~i-~l~nP~NPTG~v~s---~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~ 222 (400)
..-|+++++++|.+- . ..+ +++ |.+++. .+++.+|+++|. ++++.=|...+|.--. ........
T Consensus 186 ~l~tdv~~ie~~i~~~g~~~i~cVlS-----TTScFAPR~~D~i~eiAklC~-~~~IpHvVNNAYGlQ~---~~~~~~i~ 256 (444)
T TIGR03531 186 RLTTDVEDIERAIEEIGPENILCVLS-----TTSCFAPRSPDDIEEIAKICA-KYDIPHVVNNAYGLQS---NKYMEKIN 256 (444)
T ss_pred EEECCHHHHHHHHHHHCCCCEEEEEE-----CCCCCCCCCCCCHHHHHHHHH-HCCCCEEECCHHHHHH---HHHHHHHH
T ss_conf 77469999999999828676479985-----365459999766999999999-7499837842036617---99999999
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCC-CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 112333225741465443223445444-2211--0122687531001222332222222222223467643222222110
Q gi|254780602|r 223 VEPSLYERTLVVNGVSKAYAMTGLRIG-YAAG--ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQDFVVNNRKIFE 299 (400)
Q Consensus 223 ~~~~~~~~~i~~~S~SK~~~~~G~RiG-~~v~--~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 299 (400)
-.-.....-.++.|.-|+|-+| || .+++ ++++++++.+.-.-..+. ++.-...+..|.-+.+-..+..+.-+
T Consensus 257 ~A~r~GRVDa~VQStDKNflVP---VGGaII~s~d~~~i~~is~~YPGRAS~--sp~lDlfITLLslG~~gy~~Ll~eRk 331 (444)
T TIGR03531 257 KAIKVGRVDAVVSSTDKNFMVP---VGGAIIYSFDENFIQEISKSYPGRASA--SPSLDVLITLLSMGSKGYLELLKERK 331 (444)
T ss_pred HHHHCCCCEEEEEECCCCEEEE---CCCEEEEECCHHHHHHHHHCCCCCCCC--CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9986498319997068662543---487489718889999998418997777--40799999999974888999999999
Q ss_pred CCCCCHHHHHHCC---CCCEEEE-CCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCEEE-ECCC------
Q ss_conf 0000002455304---7760330-27408998626410233211332248989999999987--39799-8350------
Q gi|254780602|r 300 YRRDLCVAQLQGV---PGIRYMI-PDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEI--EKVAV-VQGS------ 366 (400)
Q Consensus 300 ~~r~~~~~~L~~~---~g~~~~~-p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~--~gV~v-~pG~------ 366 (400)
+.++++.+.|+++ .|-++.. |+--.-+=+.+..+ ...+-.++...|..+ .|.-| .||.
T Consensus 332 e~~~~l~~~L~~~a~~~gerlL~t~~N~IS~aitl~~l---------~~~~~t~lGsmLf~r~VsG~RVV~~~~~k~i~g 402 (444)
T TIGR03531 332 EMYKYLKELLQKLAERHGERLLDVPENPISSAMTLNTL---------RPKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGG 402 (444)
T ss_pred HHHHHHHHHHHHHHHHHCCEECCCCCCCEEEEEECCCC---------CCCCHHHHHHHHHHCCCCCCEEECCCCCEEECC
T ss_conf 99999999999999982987214899950577873667---------876789999999736887561775899738878
Q ss_pred ----CCCCC------CEEEEE--EECCHHHHHHHHHHHHHH
Q ss_conf ----22899------728999--629999999999999999
Q gi|254780602|r 367 ----SFGHG------PSIRIS--YAVSDAILEEACVRIKRF 395 (400)
Q Consensus 367 ----~Fg~~------~~iRis--~~~~~e~l~~al~rl~~~ 395 (400)
+||.. +|+-++ ++...++++..++||.+-
T Consensus 403 ~~F~~~gsh~~~yp~~Ylt~aaaIG~~~~dvd~f~~rLdk~ 443 (444)
T TIGR03531 403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHC
T ss_conf 77506777767785257998888188589999999998614
No 347
>KOG0629 consensus
Probab=95.39 E-value=0.032 Score=33.59 Aligned_cols=195 Identities=13% Similarity=0.156 Sum_probs=96.2
Q ss_pred CCCCCC---CCCCCCCCCCCCCCCCHHHHHHCCCCC-CCC-CE-EECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEEEC
Q ss_conf 222222---222222222223222103331000122-122-01-211354210000123-33321112233333201110
Q gi|254780602|r 131 MVALCG---GIPVFVDTQQDDNFQVSPEKLEQAITP-KTK-WL-FLNSPSNPSGVVYSQ-NRLRALADVLVRNPHVHIIS 203 (400)
Q Consensus 131 ~~~~~g---~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~k-~i-~l~nP~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~ 203 (400)
.+..+| -.++.|++++.+ .+++++|++.|-+ +.| .+ ++.| .|-..+|+.. +.+..|+++| ++|++|+-+
T Consensus 213 aAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vn-aTaGTTV~GAFDdL~~iadiC-~k~~lWmHv 288 (510)
T KOG0629 213 AAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVN-ATAGTTVLGAFDDLNGIADIC-EKHKLWMHV 288 (510)
T ss_pred HHHHHCCCCCEEEEECCCCCC--CCCHHHHHHHHHHHHHCCCCCEEEE-ECCCCEEEECCCCHHHHHHHH-HHCCEEEEE
T ss_conf 999856687506883255568--6566999999998885489975998-247866642458678899998-754879995
Q ss_pred CCCCCC-CCCCCCCCCCCC-CCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHCC------CCCCCCC-
Q ss_conf 122110-000012233222-11123332257414654432234454442211-0122687531001------2223322-
Q gi|254780602|r 204 DDIYEH-IVYRNCQFSNIV-NVEPSLYERTLVVNGVSKAYAMTGLRIGYAAG-ALSLIKSMIVLQG------QQTSGAC- 273 (400)
Q Consensus 204 De~Y~~-l~~~~~~~~s~~-~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~-~~~li~~l~~~~~------~~~~~~~- 273 (400)
|.++.. +.. ...+.... .+.+ -+.++. +..|..+ +.+.++.... -+.++.+.+.... .....++
T Consensus 289 DAAwGGglLm-S~k~R~kl~Gier---a~Svtw-npHK~~g-aplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~ 362 (510)
T KOG0629 289 DAAWGGGLLM-SRKHRHKLTGIER---ANSVTW-NPHKLMG-APLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSY 362 (510)
T ss_pred ECCCCCCCCC-CHHHHHHCCCCCC---CCCEEE-CHHHHHC-CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCC
T ss_conf 1000555124-7555764057532---574116-6788645-86124579988777887640200244314685652100
Q ss_pred ----CCCCCC-CCCC----C---CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCE-EEE--CCCCEEEEEECCCCCC
Q ss_conf ----222222-2222----3---46764322222211000000024553047760-330--2740899862641023
Q gi|254780602|r 274 ----SIAQWA-AVEA----L---NGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIR-YMI--PDGAFYLYPSCQDLIG 335 (400)
Q Consensus 274 ----~~~q~a-~~~~----l---~~~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~-~~~--p~g~~y~~~~~~~~~~ 335 (400)
...|.. -+.. | ..+-.-+++..+.+-+..+++++.|++-+|.. +.. |+-.-++|..++....
T Consensus 363 DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR 439 (510)
T KOG0629 363 DTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLR 439 (510)
T ss_pred CCCCCHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCCCHHHC
T ss_conf 35630332476542999999997325625899999999999999999872656111013787547875045866761
No 348
>TIGR01364 serC_1 phosphoserine aminotransferase; InterPro: IPR003248 Phosphoserine aminotransferases (2.6.1.52 from EC) catalyse the conversion of O-phospho-L-serine and oxoglutarate to 3-phosphonooxypyruvate and L-glutamate in the major phosphorylated serine biosynthesis pathway. In bacteria it is also equired for the biosynthesis of pyridoxine. The enzyme requires pyridoxal phosphate as a cofactor, and is part of the aminotransferase class-V family.; GO: 0006564 L-serine biosynthetic process.
Probab=95.08 E-value=0.18 Score=29.03 Aligned_cols=332 Identities=14% Similarity=0.168 Sum_probs=170.1
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHC-CCCCCC------CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 266565897498899999999999838-875699------8778989999999986421013333223323345433332
Q gi|254780602|r 33 VLCLTAGEPDFDMPENVKYAVVRAMER-GETKYT------AVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF 105 (400)
Q Consensus 33 ii~l~~G~p~~~~p~~i~~a~~~al~~-~~~~Y~------~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~ 105 (400)
++||+.| |- -.|+.|++.+++.+-+ ...|++ -+.-..++-......+++...++=+-+=+++--||+.-..
T Consensus 1 ~~NF~AG-PA-~LP~~VL~~aq~Ellnf~~~G~SVmEiSHRsk~F~~v~~~Ae~dlR~LL~iPd~Y~vLFLQGGAt~QFa 78 (391)
T TIGR01364 1 IYNFSAG-PA-ALPEEVLEQAQKELLNFNGLGMSVMEISHRSKEFEAVASEAESDLRELLNIPDNYEVLFLQGGATTQFA 78 (391)
T ss_pred CCCCCCC-CC-CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHH
T ss_conf 9447887-22-278889999999986575179766998538689999999999999988247998268987387246899
Q ss_pred CCCCCCCC--CCC--CCCCCCC----CCC--CCCCCCC---CCCCCCCCCCCC-CCCCCC--CHHHHHHCCCC---CCCC
Q ss_conf 22222233--223--2222333----323--2222222---222222222222-223222--10333100012---2122
Q gi|254780602|r 106 NALMATVN--MGD--EVLIPRP----YWV--SYPDMVA---LCGGIPVFVDTQ-QDDNFQ--VSPEKLEQAIT---PKTK 166 (400)
Q Consensus 106 ~~~~~~~~--~Gd--~Vlv~~P----~y~--~y~~~~~---~~g~~~~~v~~~-~~~~~~--~d~~~l~~~i~---~~~k 166 (400)
.+-+-|+. +++ ++++.+- .|. .+..+-. .+|+++..+-.. ++++|. |+.+.++ ++ ++..
T Consensus 79 ~~PlNL~~~~~~~~GK~~~A~Y~~TG~WS~kA~~EA~~~~~~~G~~v~~~~~~~~~~~y~~iP~~~~w~--~~~~G~~~~ 156 (391)
T TIGR01364 79 AVPLNLLAAKEGKNGKILVADYIVTGAWSKKALKEAKKLGNPLGVEVNVVASGEEEGNYTKIPDQSEWE--ISEDGEDAA 156 (391)
T ss_pred HHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf 999988975369998578850022175889999998860430465677614200057864277702123--277878746
Q ss_pred CEEECCCCC-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 012113542-1000012333321112233333201110122110000012233222111233322574146544322344
Q gi|254780602|r 167 WLFLNSPSN-PSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG 245 (400)
Q Consensus 167 ~i~l~nP~N-PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G 245 (400)
-|++|. || =-|+-|.+ .+=+...+..++.||+|-- | .|++..=+..+.-++..+.=|..|.+|
T Consensus 157 Yvh~c~-NETi~Gvef~P----~~P~~~~~~Pn~~LVaDmS-S----------~ilSR~~Dvs~fglIYAGAQKN~GpaG 220 (391)
T TIGR01364 157 YVHYCA-NETIHGVEFRP----ELPEVKNKDPNAPLVADMS-S----------NILSRPIDVSKFGLIYAGAQKNIGPAG 220 (391)
T ss_pred EEEECC-CCCCCCEEECC----CCCCCCCCCCCEEEEECCC-H----------HHCCCCCCCCCCCEEEEEHHHCCCCCE
T ss_conf 657257-87110216647----6886788897526885154-3----------231576785113557500321205322
Q ss_pred CCCCCCCCHHHHHHHHHH---------HCC------------CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCC
Q ss_conf 544422110122687531---------001------------22233222222222222346--7643222222110000
Q gi|254780602|r 246 LRIGYAAGALSLIKSMIV---------LQG------------QQTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRR 302 (400)
Q Consensus 246 ~RiG~~v~~~~li~~l~~---------~~~------------~~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r 302 (400)
+-.++.-++|+++... ... .+.-.||+++-+++--.|+. .+.-++++.+.=+++.
T Consensus 221 --~TvVIvR~DLLgr~~~~~LH~L~vP~~P~~~~Y~~~~~~~SmYNTPPtF~iY~~~LVf~Wlk~~GGv~~~e~~N~~KA 298 (391)
T TIGR01364 221 --LTVVIVRKDLLGRASDAELHKLGVPITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKA 298 (391)
T ss_pred --EEEEEECCHHHCCCCCCCHHHCCCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf --689998114415676230201666597841321898863887334025899987889999986062899999989999
Q ss_pred CCHHHHHHCCCCCEE--EECCCCEEEEEECCCCCCCCCCCCCC---CCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEE
Q ss_conf 000245530477603--30274089986264102332113322---4898999999998739799835022899728999
Q gi|254780602|r 303 DLCVAQLQGVPGIRY--MIPDGAFYLYPSCQDLIGKKSPSGDV---IRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRIS 377 (400)
Q Consensus 303 ~~~~~~L~~~~g~~~--~~p~g~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis 377 (400)
+++++.+.+-+|+=. +.|+ .+..++-..-..+. ..-+.+|... ++++|..-.-|+. .=|.+|-|
T Consensus 299 ~LLY~~ID~S~gFY~~~v~k~--------~RS~MNV~F~~~~~~G~~eLe~~Fl~e-A~~~gl~~LKGHR--sVGG~RAS 367 (391)
T TIGR01364 299 QLLYDAIDNSNGFYRNPVDKR--------ARSLMNVVFTLPNEKGDEELEKEFLKE-AEERGLVGLKGHR--SVGGMRAS 367 (391)
T ss_pred HHHHHHHHCCCCCCCCCCCHH--------HCCCCCEEEECCCCCCCHHHHHHHHHH-HHHCCCHHCCCCC--EECCEEEE
T ss_conf 999999864898011643754--------267464221378877855554899999-9970500127630--33125210
Q ss_pred E--ECCHHHHHHHHHHHHHHHH
Q ss_conf 6--2999999999999999998
Q gi|254780602|r 378 Y--AVSDAILEEACVRIKRFCH 397 (400)
Q Consensus 378 ~--~~~~e~l~~al~rl~~~l~ 397 (400)
+ |.|.|.++.=++=|++|-+
T Consensus 368 iYNA~ple~Vq~Lv~FM~~F~~ 389 (391)
T TIGR01364 368 IYNALPLEGVQALVDFMKEFEK 389 (391)
T ss_pred HHCCCCHHHHHHHHHHHHHHHH
T ss_conf 1117688999999999999986
No 349
>KOG3843 consensus
Probab=95.03 E-value=0.0048 Score=38.58 Aligned_cols=348 Identities=14% Similarity=0.139 Sum_probs=148.1
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCC------C-CCCCCCHHH---HHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 972665658974988999999999998388756------9-987789899---999999864210133332233233454
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETK------Y-TAVAGISPL---REAIVEKFRRDNDLHYTSDQIIVGTGA 100 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~------Y-~~~~G~~~l---R~aia~~~~~~~g~~~~~e~I~it~G~ 100 (400)
.|+|+.+.|+-.-..--.+.+.....+-.|... - |-..|..-| -...+...-+..|++.-..-++ .+=+
T Consensus 6 vdmipvgageregrvl~pl~~r~hsn~~hgigrsgdi~~iqpka~gssll~~isne~a~~~i~l~glhav~nc~v-vpl~ 84 (432)
T KOG3843 6 VDMIPVGAGEREGRVLCPLFQRLHSNFIHGIGRSGDILAIQPKAAGSSLLACISNEFAKDAIHLAGLHAVANCFV-VPLA 84 (432)
T ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCEEE-EECC
T ss_conf 320134676545640268999886533304676777200372000167999988899999998840565410468-8535
Q ss_pred C-CCCCCCCCCCC--CCCCCCCC-CCCC-CCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHCCCCCC-CCCEEECCC
Q ss_conf 3-33322222223--32232222-3333-232222222222222222222-2232221033310001221-220121135
Q gi|254780602|r 101 K-HVIFNALMATV--NMGDEVLI-PRPY-WVSYPDMVALCGGIPVFVDTQ-QDDNFQVSPEKLEQAITPK-TKWLFLNSP 173 (400)
Q Consensus 101 ~-~~l~~~~~~~~--~~Gd~Vlv-~~P~-y~~y~~~~~~~g~~~~~v~~~-~~~~~~~d~~~l~~~i~~~-~k~i~l~nP 173 (400)
+ -.+.+++..+- +|..+-++ +.-. -..+ .....+|.+|+-+.-- +.+...-|++.+++.+.+. ...|+..
T Consensus 85 tgmslslc~~s~r~krpkakyiiw~ridqks~~-ksi~~agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci-- 161 (432)
T KOG3843 85 TGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCF-KSIIHAGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCI-- 161 (432)
T ss_pred CCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHH-HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEE--
T ss_conf 663088999988613876617898850428788-99986277745631345630777769999999997487628999--
Q ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC-
Q ss_conf 42100001---23333211122333332011101221100000122332221112333225741465443223445444-
Q gi|254780602|r 174 SNPSGVVY---SQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIG- 249 (400)
Q Consensus 174 ~NPTG~v~---s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG- 249 (400)
| -|.+++ +++.+++|..+|+. ||+.-|+..+|.--. ..-..-++.. .+...---++.|+.|.|-+| +|
T Consensus 162 ~-sttscfapr~pd~leaiaaica~-~diphivnnayglqs--ee~i~~iaa~-~~~grida~vqsldknf~vp---vgg 233 (432)
T KOG3843 162 H-STTSCFAPRSPDNLEAIAAICAA-HDIPHIVNNAYGLQS--EECIHKIAAA-AECGRIDAFVQSLDKNFMVP---VGG 233 (432)
T ss_pred E-ECCCCCCCCCCCHHHHHHHHHHC-CCCHHHHCCCCCCCH--HHHHHHHHHH-HHHCCHHHHHHHHHHCCEEE---CCH
T ss_conf 5-05533578997519999999870-586255323212354--9999999988-65051989999750264100---344
Q ss_pred CCCC--HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCC
Q ss_conf 2211--012268753100122233222222222222346764----3222222110000000245530477603302740
Q gi|254780602|r 250 YAAG--ALSLIKSMIVLQGQQTSGACSIAQWAAVEALNGPQD----FVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGA 323 (400)
Q Consensus 250 ~~v~--~~~li~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~----~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p~g~ 323 (400)
.+++ ...+|..+.+.-.-..+..| +....+..|.-++. .+.+.++.+-..|+.+.+.-+.+..--+..|+.-
T Consensus 234 aiia~fk~n~iq~iak~ypgrasa~p--s~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ae~~~e~l~~~p~n~ 311 (432)
T KOG3843 234 AIIAAFKDNFIQEIAKMYPGRASASP--SLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKFAEAIGECLLETPENE 311 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
T ss_conf 57668677799999986899666685--0889999998221678888877999999999999999998613542289853
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH--CCEEEECC------------CCCCC------CCEEEEEE--ECC
Q ss_conf 8998626410233211332248989999999987--39799835------------02289------97289996--299
Q gi|254780602|r 324 FYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEI--EKVAVVQG------------SSFGH------GPSIRISY--AVS 381 (400)
Q Consensus 324 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~--~gV~v~pG------------~~Fg~------~~~iRis~--~~~ 381 (400)
.-+-..++. ..+. ..+.-..|-.-|+.+ .|--|+|- .+||. .+|+-++. +..
T Consensus 312 is~amtl~t----i~~~--k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~~~~yln~a~aigm~ 385 (432)
T KOG3843 312 ISLAMTLKT----IDEA--KDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQHCAYLNAACAIGMK 385 (432)
T ss_pred HHHHHHHCC----CCHH--HHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECEEEECCCCCCCCCCHHHHHHHHHCCCC
T ss_conf 535532513----8867--7668999887887515667458653544002403277612335675752675577760771
Q ss_pred HHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999986
Q gi|254780602|r 382 DAILEEACVRIKRFCHS 398 (400)
Q Consensus 382 ~e~l~~al~rl~~~l~~ 398 (400)
..++++-+.||.+-+.+
T Consensus 386 ~hdld~~~~rl~~~~a~ 402 (432)
T KOG3843 386 DHDLDEFFNRLDRCLAA 402 (432)
T ss_pred HHHHHHHHHHHHHHHHH
T ss_conf 75799999999999999
No 350
>KOG2790 consensus
Probab=94.73 E-value=0.35 Score=27.27 Aligned_cols=328 Identities=11% Similarity=0.120 Sum_probs=141.1
Q ss_pred CCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC--------HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 9726656589749889999999999983887569987789--------89999999986421013333223323345433
Q gi|254780602|r 31 IDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGI--------SPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH 102 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~--------~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~ 102 (400)
..+++|+.|-- ..|..|+..+.+-+-+ ..+-+-+-+. ....+.--..+++...++-+-+=+++-.|++.
T Consensus 6 ~~vvnFaaGPA--klp~~VL~e~qkdl~n-~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGGGt~ 82 (370)
T KOG2790 6 ERVVNFAAGPA--KLPESVLLEAQKDLLN-FNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGGGTG 82 (370)
T ss_pred CCEECCCCCCC--CCCHHHHHHHHHHHHC-CCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC
T ss_conf 23030578830--0788999999987526-67764127774145255788888889999999659975069999578746
Q ss_pred CCCCCCCCCC--CCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHCCCCCCCCCEEECCCCCC
Q ss_conf 3322222223--3223---22223333232222222222222222222223-2221033310001221220121135421
Q gi|254780602|r 103 VIFNALMATV--NMGD---EVLIPRPYWVSYPDMVALCGGIPVFVDTQQDD-NFQVSPEKLEQAITPKTKWLFLNSPSNP 176 (400)
Q Consensus 103 ~l~~~~~~~~--~~Gd---~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~-~~~~d~~~l~~~i~~~~k~i~l~nP~NP 176 (400)
....+..-++ ..|+ -|+.-+-+=-.+..+-++.-...+..++.+.. +=.||.+.++. +++.+.+|+| .|-
T Consensus 83 qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~EAkk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyC--aNE 158 (370)
T KOG2790 83 QFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEEAKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYC--ANE 158 (370)
T ss_pred CCCHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHCCC--CCCCCEEEEE--CCC
T ss_conf 310100222104568845648866300767999875198006713653334676898354253--8897479991--485
Q ss_pred C--CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf 0--00012333321112233333201110122110000012233222111233322574146544322344544422110
Q gi|254780602|r 177 S--GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGA 254 (400)
Q Consensus 177 T--G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~ 254 (400)
| |.-++ .+- . ...++..++.|-- +.|. +-.-+.....+++.+.-|..+..|.-+ ++.-
T Consensus 159 TVHGVEf~-----~~P-~-~~~~~~vlVaDmS-Snfl----------SrpvDvsk~gvi~aGAQKN~G~aG~Tv--vivr 218 (370)
T KOG2790 159 TVHGVEFD-----FIP-V-NDPKGAVLVADMS-SNFL----------SRPVDVSKFGVIFAGAQKNVGPAGVTV--VIVR 218 (370)
T ss_pred EEECEECC-----CCC-C-CCCCCCEEEEECC-CCHH----------CCCCCCHHCCEEEECCCCCCCCCCCEE--EEEE
T ss_conf 14211137-----888-7-7889965887633-2031----------387540120158860212556555189--9983
Q ss_pred HHHHHHHHHHC-----------CC-CCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEC
Q ss_conf 12268753100-----------12-2233222222222222346--7643222222110000000245530477603302
Q gi|254780602|r 255 LSLIKSMIVLQ-----------GQ-QTSGACSIAQWAAVEALNG--PQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIP 320 (400)
Q Consensus 255 ~~li~~l~~~~-----------~~-~~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~~r~~~~~~L~~~~g~~~~~p 320 (400)
++++.....+. .+ ..-.+|.+.-+++--.|+. .+.-+..+.+.-.++.+.+++.+.+..|+-..+-
T Consensus 219 ~dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~cpV 298 (370)
T KOG2790 219 KDLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYRCPV 298 (370)
T ss_pred HHHHCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
T ss_conf 56425655589620222310266410159985036433668999997366999998878877899998861498687556
Q ss_pred CCCEEEEEECCCCCCCCCCCCCCCCC--HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEE--ECCHHHHHHHHHHHHHHH
Q ss_conf 74089986264102332113322489--89999999987397998350228997289996--299999999999999999
Q gi|254780602|r 321 DGAFYLYPSCQDLIGKKSPSGDVIRT--DLDFVNGLLEIEKVAVVQGSSFGHGPSIRISY--AVSDAILEEACVRIKRFC 396 (400)
Q Consensus 321 ~g~~y~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~--~~~~e~l~~al~rl~~~l 396 (400)
+ +.+.. ..........| +.+|-..-.++ +..-.-|+. .-|.||-|+ +.+.++.+.-.+-+++|.
T Consensus 299 e------~~~RS---~MNV~Fri~~d~Le~eFLkeA~~~-~mv~LKGhR--SVGGiRASlYNAisv~~~q~L~~~m~~F~ 366 (370)
T KOG2790 299 E------PSVRS---RMNVPFRIEKDELEAEFLKEAAKE-HMVQLKGHR--SVGGIRASLYNAISVEEVQKLAAFMKEFQ 366 (370)
T ss_pred C------HHHHH---CCCCCEEECCHHHHHHHHHHHHHH-HCCCCCCCC--CCCCCHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 7------34421---014506846347789999999984-032224654--33534356541322999999999999999
Q ss_pred H
Q ss_conf 8
Q gi|254780602|r 397 H 397 (400)
Q Consensus 397 ~ 397 (400)
+
T Consensus 367 k 367 (370)
T KOG2790 367 K 367 (370)
T ss_pred H
T ss_conf 8
No 351
>KOG2040 consensus
Probab=94.03 E-value=0.39 Score=26.94 Aligned_cols=163 Identities=17% Similarity=0.256 Sum_probs=87.7
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCC--CCCCCCC---CCCCCCCCCC-CCCC--CC--CCCCCCCCC
Q ss_conf 756998---77898999999998642101333322332--3345433---3322222223-3223--22--223333232
Q gi|254780602|r 61 ETKYTA---VAGISPLREAIVEKFRRDNDLHYTSDQII--VGTGAKH---VIFNALMATV-NMGD--EV--LIPRPYWVS 127 (400)
Q Consensus 61 ~~~Y~~---~~G~~~lR~aia~~~~~~~g~~~~~e~I~--it~G~~~---~l~~~~~~~~-~~Gd--~V--lv~~P~y~~ 127 (400)
.+-|.| .+|..++-..+-+++-.-.|. |++. ..+|++. || .++++.. ..|+ += ++|.-.-..
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~iTG~----D~~s~QPNsGA~GEYaGL-~~IRaY~~~kge~hRnvClIPvSAHGT 642 (1001)
T KOG2040 568 IHPFAPVEQAQGYQQLFTELEKDLCEITGF----DSFSLQPNSGAQGEYAGL-RVIRAYLESKGEGHRNVCLIPVSAHGT 642 (1001)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHEEECC----CCEEECCCCCCCCCHHHH-HHHHHHHHHCCCCCCEEEEEEECCCCC
T ss_conf 788885687764999999998777632066----613426898755311229-999999985477765168986024689
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC---CCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 2222222222222222222232221033310001---2212201211354210000123333211122333332011101
Q gi|254780602|r 128 YPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI---TPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD 204 (400)
Q Consensus 128 y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i---~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D 204 (400)
....+.++|.++++|.++..++ +|..+|+++. .++-.+++++.|+ |--++ .+.++.+|++. .+|+=-|-.|
T Consensus 643 NPASA~MagmkvvpV~~~~~G~--id~~dLk~kaekh~~~Laa~MvTYPS--T~Gvf-E~~i~d~cd~i-HehGGQVYlD 716 (1001)
T KOG2040 643 NPASAAMAGMKVVPVGCDANGN--IDMVDLKAKAEKHKDNLAALMVTYPS--THGVF-EEGIDDICDII-HEHGGQVYLD 716 (1001)
T ss_pred CHHHHHHCCCEEEEEECCCCCC--CCHHHHHHHHHHHHHHHHEEEEECCC--CCCCC-CCCHHHHHHHH-HHCCCEEEEC
T ss_conf 8466886498688863157887--45999999999746522046785466--45665-54589999999-8639878853
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CCCC-CEEEEECCCCCCCCCC
Q ss_conf 22110000012233222111-2333-2257414654432234
Q gi|254780602|r 205 DIYEHIVYRNCQFSNIVNVE-PSLY-ERTLVVNGVSKAYAMT 244 (400)
Q Consensus 205 e~Y~~l~~~~~~~~s~~~~~-~~~~-~~~i~~~S~SK~~~~~ 244 (400)
|.....-..+. |+.. ..+-.++ +.|+|..|
T Consensus 717 ---------GANMNAqVGlc~pGd~GaDV~HLN-LHKTFcIP 748 (1001)
T KOG2040 717 ---------GANMNAQVGLCRPGDIGADVCHLN-LHKTFCIP 748 (1001)
T ss_pred ---------CCCCCCEECCCCCCCCCCCCCCCC-CCCEEEEC
T ss_conf ---------777523025357765665310001-34035505
No 352
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase; InterPro: IPR013441 Tyrosine phenol-lyases (4.1.99.2 from EC) (beta-tyrosinase), are pyridoxal-phosphate enzymes which are closely related to tryptophanase (4.1.99.1 from EC) (see IPR013441 from INTERPRO). Both belong to the beta-eliminating lyase family.; GO: 0050371 tyrosine phenol-lyase activity.
Probab=93.91 E-value=0.017 Score=35.24 Aligned_cols=336 Identities=14% Similarity=0.154 Sum_probs=174.9
Q ss_pred HHHHHHHHHHCCCCEEECCCCCC--CCCCCHHHHHHHHH----HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 99999999986997266565897--49889999999999----9838875699877898999999998642101333322
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAGEP--DFDMPENVKYAVVR----AMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSD 92 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G~p--~~~~p~~i~~a~~~----al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e 92 (400)
-.++.+.++.+|-+..-|..-+. |+-+ +.-.+||.+ ++.-|.-.|..+.....|.+.+.+.| |. .
T Consensus 17 r~~r~~~~~~aGyntfll~s~~~yidllt-dsGt~amsd~qW~~lm~GdeayaG~~~f~~l~~~v~e~y----Gf----k 87 (450)
T TIGR02618 17 REEREKKMKEAGYNTFLLNSEDVYIDLLT-DSGTNAMSDKQWAGLMMGDEAYAGSRNFFHLEEVVRELY----GF----K 87 (450)
T ss_pred HHHHHHHHHHCCCCEEEECCCCEEEEEEC-CCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHC----CC----E
T ss_conf 57899999745740354302313566320-356301111212210011102232588899999999871----72----2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--------CCCHHHHHHCCCCCC
Q ss_conf 332334543333222222233223222233332322222222222222222222232--------221033310001221
Q gi|254780602|r 93 QIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDN--------FQVSPEKLEQAITPK 164 (400)
Q Consensus 93 ~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~--------~~~d~~~l~~~i~~~ 164 (400)
.|++|.-+..+=.++...++.|||-|- .+-+|..-+..-+..|+..+.+-.++.++ ..+|+..++++|.+.
T Consensus 88 ~~vPthqGrGae~l~s~~~ikPG~y~~-Gnmyftttr~hqe~~G~~fvd~~~deahd~~~~~~fkG~~d~~kl~~lid~~ 166 (450)
T TIGR02618 88 YVVPTHQGRGAENLLSRILIKPGDYVP-GNMYFTTTRAHQEKNGATFVDIIIDEAHDAQLDLPFKGNVDVKKLQKLIDEV 166 (450)
T ss_pred EEECCCCCCCHHHHHHHHHCCCCCCCC-CCEEEEEHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 563066776478899886316887013-5400110011342058769998742344533673435750089999998540
Q ss_pred --CCCEEECC--CCC-CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC----CC------CCCCCCCCCCCCCCCCCCC
Q ss_conf --22012113--542-100001233332111223333320111012211----00------0001223322211123332
Q gi|254780602|r 165 --TKWLFLNS--PSN-PSGVVYSQNRLRALADVLVRNPHVHIISDDIYE----HI------VYRNCQFSNIVNVEPSLYE 229 (400)
Q Consensus 165 --~k~i~l~n--P~N-PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~----~l------~~~~~~~~s~~~~~~~~~~ 229 (400)
-+.-|+|- --| -.|.-.|-..++++-++|.+ |++.++.|..-. .| .|.+. ++..+..++..
T Consensus 167 Ga~~i~yi~~a~tvnlaGGqPvsman~r~v~~~~~~-hGi~~~~datr~venayfike~e~~y~~~---~~~~i~~em~s 242 (450)
T TIGR02618 167 GADKIPYICLAVTVNLAGGQPVSMANLREVRKLCEK-HGIKVFYDATRCVENAYFIKEREEGYKDK---SIKEILKEMMS 242 (450)
T ss_pred CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHH-CCEEEEEHHHHHHHHHHHHHHHHHCCCCC---HHHHHHHHHHH
T ss_conf 411024366666765058873027878999999864-68177621245566556443123000110---58999999876
Q ss_pred --EEEEECCCCCCCCCCCCCC-CCCCCHHH-HHHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC----
Q ss_conf --2574146544322344544-42211012-26875310012223322222222222--23467643222222110----
Q gi|254780602|r 230 --RTLVVNGVSKAYAMTGLRI-GYAAGALS-LIKSMIVLQGQQTSGACSIAQWAAVE--ALNGPQDFVVNNRKIFE---- 299 (400)
Q Consensus 230 --~~i~~~S~SK~~~~~G~Ri-G~~v~~~~-li~~l~~~~~~~~~~~~~~~q~a~~~--~l~~~~~~~~~~~~~~~---- 299 (400)
...++ |--|.+-+ .+ ||++.+++ +...... .....-++|+....+.-. ++. ....+.+...|-
T Consensus 243 y~dGCtm-sGkkdClv---niGGfl~~n~~~~~~~a~e-~vv~~eGmP~yGGlaGrdmea~a--~G~~e~~~~~yi~hr~ 315 (450)
T TIGR02618 243 YADGCTM-SGKKDCLV---NIGGFLCMNDDELFQKAKE-LVVVFEGMPSYGGLAGRDMEAMA--IGIREAVDYEYIEHRV 315 (450)
T ss_pred HHCCCCC-CCCCCEEE---ECCCEEEECHHHHHHHCCC-EEEEEECCCCCCCCCCCHHHHHH--HHHHHHHHHHHHHHHH
T ss_conf 4056512-47641156---5052467522899862056-48997166765765420089999--8889887679999999
Q ss_pred CCCCCHHHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEE------EECCCCC--CCC
Q ss_conf 00000024553047760330274089986264102332113322489899999999873979------9835022--899
Q gi|254780602|r 300 YRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVA------VVQGSSF--GHG 371 (400)
Q Consensus 300 ~~r~~~~~~L~~~~g~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~------v~pG~~F--g~~ 371 (400)
+...++.+.|+.. |+.+..|-||.-+|+|...+....... ......++..+.-+.||- +..|..- |..
T Consensus 316 ~q~~yl~~~l~~a-G~Piv~P~GGhavflda~~f~~h~~q~---~fPaq~laa~~y~~~Gvr~merGi~saGr~~~tG~~ 391 (450)
T TIGR02618 316 KQVRYLGDKLKAA-GVPIVKPVGGHAVFLDARKFLPHIPQD---QFPAQALAAAIYVESGVRSMERGIVSAGRNKKTGEH 391 (450)
T ss_pred HHHHHHHHHHHHC-CCCEEECCCCCHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHCCHHHHCCCEECCCCCCCCCC
T ss_conf 9999999999855-982440477400244488886314533---340788998887740411121230123777557654
Q ss_pred -----CEEEEEEE
Q ss_conf -----72899962
Q gi|254780602|r 372 -----PSIRISYA 379 (400)
Q Consensus 372 -----~~iRis~~ 379 (400)
.-+|+++-
T Consensus 392 ~~Pkle~vrltiP 404 (450)
T TIGR02618 392 HRPKLELVRLTIP 404 (450)
T ss_pred CCCCEEEEEEECC
T ss_conf 5884256765226
No 353
>TIGR02104 pulA_typeI pullulanase, type I; InterPro: IPR011840 Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the entries in IPR011838 from INTERPRO and IPR011839 from INTERPRO but having a different domain architecture with shorter sequences. Members are called type I pullulanases ..
Probab=93.51 E-value=0.029 Score=33.87 Aligned_cols=142 Identities=18% Similarity=0.225 Sum_probs=74.6
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCC-CCC-------------CCCCCCCHHHHHHCC
Q ss_conf 33454333322222223322322223333-232222222222222222-222-------------223222103331000
Q gi|254780602|r 96 VGTGAKHVIFNALMATVNMGDEVLIPRPY-WVSYPDMVALCGGIPVFV-DTQ-------------QDDNFQVSPEKLEQA 160 (400)
Q Consensus 96 it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~~y~~~~~~~g~~~~~v-~~~-------------~~~~~~~d~~~l~~~ 160 (400)
.++|...-+---.+++++.|. .+|. ...=..-++-+|++-|.+ |+- ..=+|.-||.-.-
T Consensus 158 ~~SGv~~~~KGkYLGL~E~gT----~~~~G~~TGl~y~keLGVTHVqLLP~fDf~~~de~~~~Fe~~YNWGYDP~nyn-- 231 (655)
T TIGR02104 158 PNSGVKNELKGKYLGLTETGT----KGPNGVSTGLDYLKELGVTHVQLLPVFDFASVDEEDPNFENAYNWGYDPLNYN-- 231 (655)
T ss_pred CCCCEECCCCCCCHHHCCCCC----CCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--
T ss_conf 788722166633210101586----68888510435554336535654341122410266778732277664766553--
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 12212201211354210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 161 ITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 161 i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
=+-+=|=+||+||+..+ .|++++++.| .++||-||.|=+|=|+. .-....++-.+.|+.+=|-=--++||
T Consensus 232 ---vPEGSYsTdP~~P~~RI---~ELKqmi~~l-H~~GirVImDVVYNH~y-~~G~~S~Fek~VPgYyyR~~~~G~~~-- 301 (655)
T TIGR02104 232 ---VPEGSYSTDPYDPATRI---LELKQMIQAL-HENGIRVIMDVVYNHTY-SRGEESPFEKTVPGYYYRYNEDGTFS-- 301 (655)
T ss_pred ---CCCCCCCCCCCCCCCHH---HHHHHHHHHH-HHCCCEEEEEECCCCCC-CCCCCCCHHHCCCCHHEEECCCCCCC--
T ss_conf ---77754367888773076---7888999999-86688799850247603-34675850003872111147888824--
Q ss_pred CCCCCCCCCCCCCHHH
Q ss_conf 2234454442211012
Q gi|254780602|r 241 YAMTGLRIGYAAGALS 256 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~ 256 (400)
+-+| ||=-+|++.
T Consensus 302 -NGtG--vGNdtASEr 314 (655)
T TIGR02104 302 -NGTG--VGNDTASER 314 (655)
T ss_pred -CCCC--CCCCCCCCC
T ss_conf -7643--547600002
No 354
>TIGR02418 acolac_catab acetolactate synthase, catabolic; InterPro: IPR012782 Acetolactate synthase is a thiamin pyrophosphate-dependent enzyme that combines two molecules of pyruvate to yield 2-acetolactate with the release of CO2. It exists in two distinct forms that have different properties, though they are clearly related , . The biosynthetic form, found in plants, fungi and bacteria, is involved in the biosynthesis of branched-chain amino acids and contains non-catalytic FAD. The catabolic form is found only in some bacteria, participates in butanediol fermentation, and does not contain FAD. This entry represents the catabolic form of acetolactate synthase, generally found in species that posses acetolactate decarboxylase, which is often encoded in the same operon. The enzyme is thought to be a homotetramer, though this has not conclusively been shown. Each monomer consists of three distinct domains, designated, starting from the N-terminus, as alpha, beta and gamma . The core of the alpha and gamma domains is a six-stranded parallel beta sheet surrounded by alpha helices, while the the beta domain forms a double Rossman fold. The thiamin pyrophosphate cofactor has an unusual conformation that has not been seen in other enzymes using this cofactor, including the biosynthetic form of acetolactate synthase. The active site is located in a funnel at the dimer interface, bordered by residues from all three domains.; GO: 0000287 magnesium ion binding, 0003984 acetolactate synthase activity, 0030976 thiamin pyrophosphate binding, 0050660 FAD binding.
Probab=92.05 E-value=0.71 Score=25.37 Aligned_cols=110 Identities=18% Similarity=0.256 Sum_probs=53.0
Q ss_pred CCCCC-CHHHHHHHHHHHHCCC-----CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CCCC-CCCCCC
Q ss_conf 74988-9999999999983887-----56998778989999999986421013333223323345433-3322-222223
Q gi|254780602|r 41 PDFDM-PENVKYAVVRAMERGE-----TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKH-VIFN-ALMATV 112 (400)
Q Consensus 41 p~~~~-p~~i~~a~~~al~~~~-----~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~-~l~~-~~~~~~ 112 (400)
|...+ |..-++.+.++++... .|-.. +.++.-+||.+++++. .+++ =+-+=+.|+-+ -++. .|..-+
T Consensus 181 P~~Gaa~~~~i~~~~~~I~~Ak~PVlLlG~~a--S~~~~~~Av~rll~k~-~LPv--VeTfQgAG~vsrele~~TFfGRv 255 (553)
T TIGR02418 181 PKLGAAADADIDEVAEAIKNAKLPVLLLGLRA--SSQETTEAVRRLLKKT-QLPV--VETFQGAGVVSRELEDETFFGRV 255 (553)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCC--CCHHHHHHHHHHHCCC-CCCC--EEEEECCEEECHHCCCCCCEECC
T ss_conf 67888738899999999983199669850478--8889999999986460-6882--14020051311002456521001
Q ss_pred -----CCCCCCC-----CCCCCCC--CCCC--CCCCCCCCCCCCCC---CCCCCCCCHHH
Q ss_conf -----3223222-----2333323--2222--22222222222222---22232221033
Q gi|254780602|r 113 -----NMGDEVL-----IPRPYWV--SYPD--MVALCGGIPVFVDT---QQDDNFQVSPE 155 (400)
Q Consensus 113 -----~~Gd~Vl-----v~~P~y~--~y~~--~~~~~g~~~~~v~~---~~~~~~~~d~~ 155 (400)
+|||..| |-+=+|. .|+. .-....++++.++. ..++.|.|+.|
T Consensus 256 GLFrNQ~GD~LLk~aDLvItIGYdPIEYep~~WN~~~~~~Iv~iD~~~A~i~~~yqP~~e 315 (553)
T TIGR02418 256 GLFRNQPGDKLLKQADLVITIGYDPIEYEPRNWNSELDATIVHIDVEPAEIDNNYQPDLE 315 (553)
T ss_pred CCCCCCCCHHHHHHCCEEEEECCCCEECCHHHCCCCCCCEEEEEEEEEEEHHHCCCCCHH
T ss_conf 144587002577566978983388503075544778872068973144212003686144
No 355
>KOG1403 consensus
Probab=90.79 E-value=1.3 Score=23.82 Aligned_cols=298 Identities=12% Similarity=0.090 Sum_probs=128.6
Q ss_pred CCHHHHHHHHHHHHCCC--CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCCCC
Q ss_conf 89999999999983887--56998778989999999986421013333223323345433332222222---33223222
Q gi|254780602|r 45 MPENVKYAVVRAMERGE--TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMAT---VNMGDEVL 119 (400)
Q Consensus 45 ~p~~i~~a~~~al~~~~--~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~---~~~Gd~Vl 119 (400)
..|.+.+|..+.+.... .++-. .+|-+ .|+.+... ++ .-+-++++|.++++..++++.- .... .||
T Consensus 62 chp~VV~A~~kQmat~~tN~RFlh----d~lv~-cA~~l~st--lP-eLsvc~F~NSGSEANDLALRLAR~ftkhq-DvI 132 (452)
T KOG1403 62 CHPEVVRAGAKQMATISTNNRFLH----DELVQ-CARTLTST--LP-ELSVCFFVNSGSEANDLALRLARNFTKHQ-DVI 132 (452)
T ss_pred CCHHHHHHHHHHHHHHCCCCHHHH----HHHHH-HHHHHHHC--CC-CCEEEEEECCCCHHHHHHHHHHHHHCCCC-CEE
T ss_conf 789999999988767504524667----78999-99998610--87-85189996688615589999987512567-548
Q ss_pred CCCCCCCCCCCCCC-C------CC---CCCCCC---CCC--CCCCCCC----H-------HHHHHCCCC----CC--CCC
Q ss_conf 23333232222222-2------22---222222---222--2232221----0-------333100012----21--220
Q gi|254780602|r 120 IPRPYWVSYPDMVA-L------CG---GIPVFV---DTQ--QDDNFQV----S-------PEKLEQAIT----PK--TKW 167 (400)
Q Consensus 120 v~~P~y~~y~~~~~-~------~g---~~~~~v---~~~--~~~~~~~----d-------~~~l~~~i~----~~--~k~ 167 (400)
+.+-.|-.+.+... . .| .+|.++ |+. ..+.|.. + .|.+++.++ .. ..+
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEECHHCCCEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHH
T ss_conf 87300034300146506443068988578761674578631256122013876650044303799999999852775799
Q ss_pred EEECCCCCCCCCCCCCC-CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCC
Q ss_conf 12113542100001233-33211122333332011101221100000122332221112333225741465443223445
Q gi|254780602|r 168 LFLNSPSNPSGVVYSQN-RLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGL 246 (400)
Q Consensus 168 i~l~nP~NPTG~v~s~~-~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~ 246 (400)
++--+-+.=.|.+++++ -.+++++. .+.++=..|.||+--.|.--|. ..++.. +++-+=-+-+..|..+ -|.
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~-Vr~aGGv~IaDEVQvGFGRvG~---hyWafq--~y~fiPDIVtmgKpmG-NGh 285 (452)
T KOG1403 213 FIAESLQSCGGQIIPPAGYFQAVADA-VRSAGGVCIADEVQVGFGRVGS---HYWAFQ--TYNFIPDIVTMGKPMG-NGH 285 (452)
T ss_pred HHHHHHHHCCCCCCCCHHHHHHHHHH-HHCCCCEEEEEHHHHCCCCCCH---HHHHHH--HHCCCCCHHEECCCCC-CCC
T ss_conf 99999985698135843278999999-8517976984212104332310---354444--5245643300046577-997
Q ss_pred CCCCCCCHHHHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCHHHHHHCCC-CCEEEE-CC
Q ss_conf 44422110122687531--0012223322222222222234676-4322222211000000024553047-760330-27
Q gi|254780602|r 247 RIGYAAGALSLIKSMIV--LQGQQTSGACSIAQWAAVEALNGPQ-DFVVNNRKIFEYRRDLCVAQLQGVP-GIRYMI-PD 321 (400)
Q Consensus 247 RiG~~v~~~~li~~l~~--~~~~~~~~~~~~~q~a~~~~l~~~~-~~~~~~~~~~~~~r~~~~~~L~~~~-g~~~~~-p~ 321 (400)
-++.+++-+++.+++.. +.-..+.+-+..+..++++.|+..+ +-+.+..+.. -+++...|+.+. ..+++- -.
T Consensus 286 PVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~v---G~~L~~lL~~~k~kh~~IGDvR 362 (452)
T KOG1403 286 PVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQV---GEKLEVLLRRLKQKHECIGDVR 362 (452)
T ss_pred EEEEEECCHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCEECCC
T ss_conf 0268853688999850266000004699806589999999997456677889988---7999999998765061310133
Q ss_pred -CCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEC
Q ss_conf -4089986264102332113322489899999999873979983
Q gi|254780602|r 322 -GAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQ 364 (400)
Q Consensus 322 -g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~p 364 (400)
-|.|+=+|+-+--....+.. .-..-...+|-+.++|++..
T Consensus 363 GvGLFiGIdLVkD~~tRtP~t---k~A~~~v~rlke~y~VLlsa 403 (452)
T KOG1403 363 GVGLFIGIDLVKDRKTRTPDT---KEAHWVVNRLKELYRVLLSA 403 (452)
T ss_pred CCEEEEEEEEECCCCCCCCCH---HHHHHHHHHHHHHHHEEEEC
T ss_conf 322788520001112379737---87999999998864078706
No 356
>KOG1405 consensus
Probab=86.59 E-value=0.55 Score=26.04 Aligned_cols=211 Identities=17% Similarity=0.171 Sum_probs=90.5
Q ss_pred HHHHHCCCCC-----CCCCEEECCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 3331000122-----1220121135-42100-001233332111223333320111012211000001223322211123
Q gi|254780602|r 154 PEKLEQAITP-----KTKWLFLNSP-SNPSG-VVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPS 226 (400)
Q Consensus 154 ~~~l~~~i~~-----~~k~i~l~nP-~NPTG-~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~ 226 (400)
+++++++|.. ++-+-+++-| +--.| .--|++.+++|-+++ ++|++..|.||+-..- | ..-.++.-+
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~-~Kh~v~fivDEVQTGg---G-aTGk~WaHe-- 327 (484)
T KOG1405 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDIT-KKHGVAFIVDEVQTGG---G-ATGKFWAHE-- 327 (484)
T ss_pred HHHHHHHHHHHHHCCCCEEEEEEECHHCCCCCCCCCHHHHHHHHHHH-HHCCEEEEEEEEECCC---C-CCCCEEEEH--
T ss_conf 99999999997603797579986511025788668989999999999-8649589964000078---8-667543202--
Q ss_pred CC--CEEEEECCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHCCCCCCC-CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33--225741465443223445444221101226-8753100122233-2222222-22222346764322222211000
Q gi|254780602|r 227 LY--ERTLVVNGVSKAYAMTGLRIGYAAGALSLI-KSMIVLQGQQTSG-ACSIAQW-AAVEALNGPQDFVVNNRKIFEYR 301 (400)
Q Consensus 227 ~~--~~~i~~~S~SK~~~~~G~RiG~~v~~~~li-~~l~~~~~~~~~~-~~~~~q~-a~~~~l~~~~~~~~~~~~~~~~~ 301 (400)
.+ +.-.-+-+|||-|-.. ||... ++++ .+-.++-. +..+ ++...+. .++.... .++.+++ .++.
T Consensus 328 hw~l~~PpD~vTFSKK~q~g----Gffh~-~~frpn~pYrifN-TWmGdP~k~lll~~vv~~I~-~~~Ll~n----~~~v 396 (484)
T KOG1405 328 HWNLDSPPDVVTFSKKFQTG----GFFHD-EEFRPNEPYRIFN-TWMGDPSKNLLLEEVVQEIK-REDLLNN----VAHV 396 (484)
T ss_pred HCCCCCCCCCEEHHHHHHCC----CCCCC-CCCCCCCHHHHHH-HHCCCHHHHHHHHHHHHHHH-HHHHHHH----HHHH
T ss_conf 03899995101102555227----64247-3348784478765-43078588899999999985-8889988----9999
Q ss_pred CCCHHHHHHC----CCC-CEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEE
Q ss_conf 0000245530----477-60330274089986264102332113322489899999999873979983502289972899
Q gi|254780602|r 302 RDLCVAQLQG----VPG-IRYMIPDGAFYLYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRI 376 (400)
Q Consensus 302 r~~~~~~L~~----~~g-~~~~~p~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRi 376 (400)
-+.+.+.|.+ .|| +.-.+..|+|..| |++.... .+-...+++-.||.+-- .| ...||+
T Consensus 397 G~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~-d~ps~~~------------Rdk~i~~~~~nGv~~GG---Cg-~~siRf 459 (484)
T KOG1405 397 GKALLKGLLELQAKYPGKINNLRGRGTFIAW-DCPSGSI------------RDKLILIARLNGVNLGG---CG-DKSIRF 459 (484)
T ss_pred HHHHHHHHHHHHHHCCHHHHCCCCCCEEEEE-ECCCHHH------------HHHHHHHHHHCCCEECC---CC-CCEEEE
T ss_conf 9999988999988684255424566327997-3898178------------89999999876942146---54-202540
Q ss_pred --EEECCHHHHHHHHHHHHHHHHHC
Q ss_conf --96299999999999999999860
Q gi|254780602|r 377 --SYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 377 --s~~~~~e~l~~al~rl~~~l~~l 399 (400)
++.-.+.-..--++++.+.++.|
T Consensus 460 RPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405 460 RPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred CCCEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 3320114666889999999986049
No 357
>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=84.65 E-value=2.4 Score=22.15 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=40.4
Q ss_pred ECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE-CCCCCCCCCCCCC
Q ss_conf 11354210000123-333211122333332011101221100000122332221112333225741-4654432234454
Q gi|254780602|r 170 LNSPSNPSGVVYSQ-NRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVV-NGVSKAYAMTGLR 247 (400)
Q Consensus 170 l~nP~NPTG~v~s~-~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~-~S~SK~~~~~G~R 247 (400)
+++-+|||-.-++- ++.+-.+ + .+++=|..+-|..|.- ++-.+ .+.|-.++. .-.|.++| =|+|
T Consensus 276 iT~~~~Pa~eplpGF~~~KP~V-F----aGlYPid~~~Ye~Lrd------ALeKL--~LNDAsL~yE~E~S~ALG-FGFR 341 (598)
T TIGR01393 276 ITSVKNPAKEPLPGFKEVKPMV-F----AGLYPIDTEDYEDLRD------ALEKL--KLNDASLTYEPESSPALG-FGFR 341 (598)
T ss_pred EECCCCCCCCCCCCCCCCCCEE-E----ECCCCCCCHHHHHHHH------HHHHH--HHHHHHHHCCCCCCCCCC-CCEE
T ss_conf 5256787376788861257658-6----0125888034689999------97555--440254210223630037-4043
Q ss_pred CCCC-CCHHHHHHH
Q ss_conf 4422-110122687
Q gi|254780602|r 248 IGYA-AGALSLIKS 260 (400)
Q Consensus 248 iG~~-v~~~~li~~ 260 (400)
|||+ .-+-|++++
T Consensus 342 CGFLGLLHmEiiqE 355 (598)
T TIGR01393 342 CGFLGLLHMEIIQE 355 (598)
T ss_pred ECCCCCHHHHHHHH
T ss_conf 32666336899987
No 358
>PRK13118 consensus
Probab=81.87 E-value=1.6 Score=23.30 Aligned_cols=83 Identities=12% Similarity=0.145 Sum_probs=37.1
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+...|.+++|+ .+.+++++|++. ++ .-++.++=- .. .|.+ . ...++..+.+-.+.+.++ .
T Consensus 147 gl~~I~lvaPt------t~~~Ri~~i~~~-a~-gFiY~vs~~---Gv--TG~~-~---~~~~~~~~~i~~ik~~t~---~ 206 (269)
T PRK13118 147 GLDFIRLTSPT------TSDERLPRVLEH-AS-GYLYYVSLA---GV--TGAA-A---LDTEHVEEAVARLRRHTD---L 206 (269)
T ss_pred CCCHHEEECCC------CCHHHHHHHHHC-CC-CCEEEEECC---CC--CCCC-C---CCHHHHHHHHHHHHHHCC---C
T ss_conf 98464036989------878999999843-78-838998545---66--7877-6---671989999999996258---9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 445444221101226875310012
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQ 267 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~ 267 (400)
| +=+||-+..++.++.+....+-
T Consensus 207 P-v~vGFGIs~~e~~~~v~~~aDG 229 (269)
T PRK13118 207 P-VVVGFGIRDAESAAAIARLADG 229 (269)
T ss_pred C-EEEEECCCCHHHHHHHHCCCCE
T ss_conf 8-1787167999999999800999
No 359
>pfam00290 Trp_syntA Tryptophan synthase alpha chain.
Probab=81.24 E-value=1.4 Score=23.53 Aligned_cols=47 Identities=21% Similarity=0.275 Sum_probs=29.0
Q ss_pred CHHHH-HHHHHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 58999-999999999869972665658974988--9999999999983887
Q gi|254780602|r 14 SATLV-AAQRVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGE 61 (400)
Q Consensus 14 s~~~~-~~~~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~ 61 (400)
+|..+ -.+.++.+...|.|+|-+++=..| |. -|-|++|..+|+++|.
T Consensus 19 ~P~~~~~~~~i~~l~~~GaDiiEiGiPFSD-P~ADGpvIq~A~~~AL~~G~ 68 (258)
T pfam00290 19 DPDLETTLEILEALEEAGADAIELGIPFSD-PLADGPTIQRANLRALAGGM 68 (258)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCC
T ss_conf 899899999999999769999997899888-76658999999999998699
No 360
>PRK13116 consensus
Probab=81.06 E-value=1.6 Score=23.30 Aligned_cols=38 Identities=24% Similarity=0.282 Sum_probs=18.6
Q ss_pred HHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 99999869972665658974988--9999999999983887
Q gi|254780602|r 23 VRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGE 61 (400)
Q Consensus 23 ~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~ 61 (400)
++.+...|.|+|-+++=..| |. -|-|++|-.+|++.|.
T Consensus 37 l~~l~~~GaDiiElGiPFSD-P~ADGPvIQ~A~~rAL~~G~ 76 (278)
T PRK13116 37 ISTAIEAGADALELGVPFSD-PVADGPTVAESHLRALDGGA 76 (278)
T ss_pred HHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCC
T ss_conf 99999669999997999888-56668999999999997698
No 361
>PRK13117 consensus
Probab=80.29 E-value=1.6 Score=23.26 Aligned_cols=37 Identities=27% Similarity=0.354 Sum_probs=16.8
Q ss_pred HHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCC
Q ss_conf 99999869972665658974988--999999999998388
Q gi|254780602|r 23 VRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERG 60 (400)
Q Consensus 23 ~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~ 60 (400)
+..+...|.|+|-+++=..| |. -|-|++|-.+||++|
T Consensus 37 ~~~l~~~GaDiiElGiPfSD-P~ADGpvIq~A~~rAL~~G 75 (268)
T PRK13117 37 IDTLIEAGADALELGIPFSD-PLADGPTIQNANLRALAAG 75 (268)
T ss_pred HHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCC
T ss_conf 99999669998997899888-5655799999999998459
No 362
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=78.28 E-value=3.3 Score=21.32 Aligned_cols=61 Identities=25% Similarity=0.342 Sum_probs=35.7
Q ss_pred CHHHHHHHHHCCC-----------CHHHHH-HHHHHHHHHCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHCCC
Q ss_conf 9367889873897-----------589999-99999999869972665658974-9889999999999983887
Q gi|254780602|r 1 MVFISNILRRVQP-----------SATLVA-AQRVRDLRSKGIDVLCLTAGEPD-FDMPENVKYAVVRAMERGE 61 (400)
Q Consensus 1 m~~~s~~~~~l~~-----------s~~~~~-~~~~~~~~~~g~~ii~l~~G~p~-~~~p~~i~~a~~~al~~~~ 61 (400)
|..+++..++++. +|..+. .+.++.+...|.|+|-+++-..| ..=-|-|++|..+|+++|.
T Consensus 1 Mnri~~~F~~~~~~~ali~y~taG~P~~e~s~~~~~~l~~~GaDiiElGiPfSDP~ADGpvIq~A~~~AL~~G~ 74 (263)
T CHL00200 1 MNTISNVFEKLDKQCALIPFITAGDPDIVITKKALKILDKKGADIIELGIPYSDPLADGPIIQEASNRALKQGI 74 (263)
T ss_pred CCHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 96489999741489616888707389878999999999976999999789888866658999999999997798
No 363
>PRK13119 consensus
Probab=77.96 E-value=3.6 Score=21.10 Aligned_cols=41 Identities=22% Similarity=0.268 Sum_probs=24.2
Q ss_pred HHHHHHHHHCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHCC
Q ss_conf 99999999869972665658974-988999999999998388
Q gi|254780602|r 20 AQRVRDLRSKGIDVLCLTAGEPD-FDMPENVKYAVVRAMERG 60 (400)
Q Consensus 20 ~~~~~~~~~~g~~ii~l~~G~p~-~~~p~~i~~a~~~al~~~ 60 (400)
.+.++.+...|.|+|-+++-..| ..=-|-|++|-.+|+++|
T Consensus 32 ~~~l~~l~~~GadiiElGiPFSDP~ADGPvIq~A~~rAL~~G 73 (261)
T PRK13119 32 LALMHGMVANGADILELGVPFSDPMADGPVIQRAAERALANG 73 (261)
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 999999996699999978988886665899999999999779
No 364
>PRK13140 consensus
Probab=77.04 E-value=4.5 Score=20.47 Aligned_cols=60 Identities=18% Similarity=0.318 Sum_probs=34.2
Q ss_pred CHHHHHHHHHCC----------CCHHHH-HHHHHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 936788987389----------758999-999999999869972665658974988--9999999999983887
Q gi|254780602|r 1 MVFISNILRRVQ----------PSATLV-AAQRVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGE 61 (400)
Q Consensus 1 m~~~s~~~~~l~----------~s~~~~-~~~~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~ 61 (400)
|..+++..+..+ .+|..+ -.+.++.+...|.|+|-+++-..| |. -|-|++|..+|+++|.
T Consensus 1 Mnri~~~f~~~kk~~li~y~taG~P~~~~s~~~~~~l~~~GaDiiElGiPfSD-P~ADGpvIq~A~~rAL~~G~ 73 (257)
T PRK13140 1 MNRINQLFQNKKKDILSIYFTAGYPTLEDTVSIIKDLEKHGVDMIEIGIPFSD-PLADGPVIQKSATQALKNGM 73 (257)
T ss_pred CCHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCC
T ss_conf 96579999856997168888182898799999999999759999997898898-77658999999999998699
No 365
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family; InterPro: IPR011957 Characterised members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases..
Probab=75.08 E-value=2.7 Score=21.87 Aligned_cols=72 Identities=17% Similarity=0.284 Sum_probs=37.3
Q ss_pred CCEEEECCCCEEEEE-------ECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEE---EECCCCCC---C-CCEEEEEEE
Q ss_conf 760330274089986-------264102332113322489899999999873979---98350228---9-972899962
Q gi|254780602|r 314 GIRYMIPDGAFYLYP-------SCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVA---VVQGSSFG---H-GPSIRISYA 379 (400)
Q Consensus 314 g~~~~~p~g~~y~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~---v~pG~~Fg---~-~~~iRis~~ 379 (400)
|-+++.-+-|.|.|+ |+++. ..+..|.-..|....+|+ |+|-++=. + +-||=+.=+
T Consensus 400 GDKY~r~~dG~YtYaGR~DDmlKVSGI----------yVSPfEvE~AL~~H~~VLEAAVvg~~D~~GL~KPKAFvVL~~G 469 (520)
T TIGR02262 400 GDKYVRNDDGVYTYAGRTDDMLKVSGI----------YVSPFEVESALIAHPAVLEAAVVGVEDEDGLIKPKAFVVLRPG 469 (520)
T ss_pred CCCEEECCCCEEEEECCCCCCEEECCE----------EECCHHHHHHHHCCHHHCEEEECCCCCCCCCCCCCEEEEECCC
T ss_conf 871036378506870244352355241----------6781799988513512220421587488887177115850788
Q ss_pred --CCHHHHHHHHHHHHHHHHH
Q ss_conf --9999999999999999986
Q gi|254780602|r 380 --VSDAILEEACVRIKRFCHS 398 (400)
Q Consensus 380 --~~~e~l~~al~rl~~~l~~ 398 (400)
...+-+++ -||+++++
T Consensus 470 ~~~~~~al~~---~LK~hvK~ 487 (520)
T TIGR02262 470 ADIDNEALET---ELKEHVKD 487 (520)
T ss_pred CCCCHHHHHH---HHHHHHHH
T ss_conf 7645134489---99999976
No 366
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=71.12 E-value=8.3 Score=18.88 Aligned_cols=48 Identities=19% Similarity=0.209 Sum_probs=28.7
Q ss_pred CCCCC-CCCCHHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEEC----CHHHHHHHHHHHHHHHHHCC
Q ss_conf 11332-24898999999998739799835022899728999629----99999999999999998609
Q gi|254780602|r 338 SPSGD-VIRTDLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAV----SDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 338 ~~~~~-~~~~~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~----~~e~l~~al~rl~~~l~~l~ 400 (400)
...+. ......+|+++|.+. | .+=|||--+.+ ++|+ +++|++|++++.
T Consensus 142 ~LTg~~~~~ptl~Fa~~L~~~-~----------kP~WiRYVlVPGyTD~~eD----i~~l~~fv~~~~ 194 (243)
T TIGR02493 142 KLTGVKSLEPTLEFAKYLAKR-N----------KPIWIRYVLVPGYTDSEED----IEALAEFVKTLP 194 (243)
T ss_pred CCCCCCCCHHHHHHHHHHHHC-C----------CCEEEEEEECCCCCCCHHH----HHHHHHHHHHCC
T ss_conf 014567752458999999965-8----------9889999865887799899----999999997469
No 367
>PRK13121 consensus
Probab=70.81 E-value=4.9 Score=20.28 Aligned_cols=83 Identities=13% Similarity=0.176 Sum_probs=37.7
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+...|.|++|+. +.++++++++. +. .-++.++= ... .|.+. . ..++..+.+=.+.+.++.
T Consensus 147 gl~~I~lvaPtt------~~~Ri~~i~~~-~~-gFiY~Vs~---~Gv--TG~~~-~---~~~~~~~~i~~ik~~t~~--- 206 (265)
T PRK13121 147 GIDPIFLLAPTS------TDERIAAVARV-AS-GYVYYVSL---KGV--TGAAT-L---DVSSVAAKLPAIRSHVPL--- 206 (265)
T ss_pred CCCEEEEECCCC------CHHHHHHHHHH-CC-CEEEEEEC---CCC--CCCCC-C---CHHHHHHHHHHHHHCCCC---
T ss_conf 996689958999------89999999962-89-80999755---556--67775-6---628899999999854799---
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 445444221101226875310012
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQ 267 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~ 267 (400)
| .=+||-+.+++.++.+....+-
T Consensus 207 P-v~vGFGIs~~e~~~~v~~~ADG 229 (265)
T PRK13121 207 P-VGVGFGIRDAATARAVAEVADA 229 (265)
T ss_pred C-EEEECCCCCHHHHHHHHHCCCE
T ss_conf 8-5997688989999999811999
No 368
>PRK13137 consensus
Probab=68.98 E-value=4.1 Score=20.71 Aligned_cols=37 Identities=22% Similarity=0.124 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHCCCC--EEECCCCCCCCCCCHHHHHHH
Q ss_conf 9999999999986997--266565897498899999999
Q gi|254780602|r 17 LVAAQRVRDLRSKGID--VLCLTAGEPDFDMPENVKYAV 53 (400)
Q Consensus 17 ~~~~~~~~~~~~~g~~--ii~l~~G~p~~~~p~~i~~a~ 53 (400)
.++.+..++++++|+. |--+..|+||+..-..+.+++
T Consensus 10 ~Ri~~~F~~~k~~~~~ali~yitaG~P~~~~s~~~~~~l 48 (266)
T PRK13137 10 QRLHAAFARARAEGRAAFIPFLTAGYPSAAGFLQVAEEL 48 (266)
T ss_pred HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 899999999997699538878668188878999999999
No 369
>PRK13120 consensus
Probab=66.35 E-value=6.9 Score=19.37 Aligned_cols=87 Identities=13% Similarity=0.193 Sum_probs=38.9
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+...|.|++|+. +.+++++|++.+ . .-++.++= ... .|.+- ...++..+.+-.+...++ +
T Consensus 151 gi~~I~LiaPtT------~~eRi~~I~~~s-~-GFvY~VS~---~GV--TG~~~----~~~~~l~~~i~~ik~~t~---~ 210 (285)
T PRK13120 151 GVAPIFLLAPTS------TEARIEAIGRVA-R-GYVYYVSL---KGV--TGAGS----LDTDDVARKLALIRRHVH---I 210 (285)
T ss_pred CCCEEEEECCCC------CHHHHHHHHHHC-C-CCEEEEEC---CCC--CCCCC----CCHHHHHHHHHHHHHCCC---C
T ss_conf 996589957999------899999999508-9-81899865---654--68875----566889999999997269---9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCCCCCCC
Q ss_conf 4454442211012268753100122233
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQGQQTSG 271 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~~~~~~ 271 (400)
| .=+||-+..++-++.+....+-...|
T Consensus 211 P-v~vGFGIs~~e~v~~~~~~ADGvIVG 237 (285)
T PRK13120 211 P-VGVGFGIRDAASAQRIAAHADAVVIG 237 (285)
T ss_pred C-EEEEECCCCHHHHHHHHCCCCEEEEC
T ss_conf 7-59996259899999997029999987
No 370
>PRK13111 trpA tryptophan synthase subunit alpha; Provisional
Probab=65.87 E-value=6 Score=19.75 Aligned_cols=48 Identities=21% Similarity=0.250 Sum_probs=31.0
Q ss_pred CHHHH-HHHHHHHHHHCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHCCC
Q ss_conf 58999-999999999869972665658974-9889999999999983887
Q gi|254780602|r 14 SATLV-AAQRVRDLRSKGIDVLCLTAGEPD-FDMPENVKYAVVRAMERGE 61 (400)
Q Consensus 14 s~~~~-~~~~~~~~~~~g~~ii~l~~G~p~-~~~p~~i~~a~~~al~~~~ 61 (400)
+|..+ -.+.++.+...|.|+|-+++-..| ..=-|-|++|..+|+++|.
T Consensus 19 ~P~~e~~~~~~~~l~~~Gad~iEiGiPfSDP~aDGpvIq~a~~~AL~~G~ 68 (256)
T PRK13111 19 DPDLETSLEILKALVEAGADIIELGIPFSDPVADGPVIQRASLRALAAGV 68 (256)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 89989999999999965999999788878876657999999999997799
No 371
>PRK13114 consensus
Probab=65.71 E-value=5.2 Score=20.10 Aligned_cols=46 Identities=24% Similarity=0.263 Sum_probs=27.5
Q ss_pred HHHHHHH-HHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 8999999-999999869972665658974988--9999999999983887
Q gi|254780602|r 15 ATLVAAQ-RVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGE 61 (400)
Q Consensus 15 ~~~~~~~-~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~ 61 (400)
|..+... .++.+...|.|+|-+++-..| |. -|-|++|-.+|+++|.
T Consensus 24 P~~~~t~~~i~~l~~~GaDiiEiGiPFSD-P~ADGpvIq~A~~rAL~~G~ 72 (266)
T PRK13114 24 PTPGDTAANLDALVAGGADVIELGMPFTD-PMADGPAIQAANLRSLAAGT 72 (266)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCC
T ss_conf 99899999999999769999997999888-67768999999999998699
No 372
>PRK13131 consensus
Probab=65.64 E-value=6.7 Score=19.44 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=22.9
Q ss_pred HHHHH-HHHHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHC
Q ss_conf 89999-99999999869972665658974988--99999999999838
Q gi|254780602|r 15 ATLVA-AQRVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMER 59 (400)
Q Consensus 15 ~~~~~-~~~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~ 59 (400)
|..+. .+.++.+...|.|+|-+++-..| |. -|-|++|-.++++.
T Consensus 22 P~~e~s~~~~~~l~~~GadiiEiGiPFSD-P~ADGpvIQ~a~~rAL~~ 68 (257)
T PRK13131 22 PNYELSFEIIKTLIISGVSALELGFAFSD-PVADGITIQASHLRALKH 68 (257)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHC
T ss_conf 99889999999999779999997899888-554559999999999978
No 373
>PRK13139 consensus
Probab=65.00 E-value=6.6 Score=19.50 Aligned_cols=38 Identities=18% Similarity=0.238 Sum_probs=18.2
Q ss_pred HHHHHHCCCCEEECCCCCCC-CCCCHHHHHHHHHHHHCC
Q ss_conf 99999869972665658974-988999999999998388
Q gi|254780602|r 23 VRDLRSKGIDVLCLTAGEPD-FDMPENVKYAVVRAMERG 60 (400)
Q Consensus 23 ~~~~~~~g~~ii~l~~G~p~-~~~p~~i~~a~~~al~~~ 60 (400)
++++...|.|+|-+++=..| ..=-|-|++|..+|+++|
T Consensus 36 ~~~l~~~GaDiiElGiPFSDP~ADGpvIq~A~~~AL~~G 74 (254)
T PRK13139 36 IRAMVAGGVDLMELQIPFSEPMADGPVILKANQAALAGG 74 (254)
T ss_pred HHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 999996699999978988886665899999999999769
No 374
>PRK13127 consensus
Probab=64.78 E-value=6.1 Score=19.71 Aligned_cols=46 Identities=28% Similarity=0.268 Sum_probs=25.2
Q ss_pred HHHHH-HHHHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCC
Q ss_conf 89999-99999999869972665658974988--9999999999983887
Q gi|254780602|r 15 ATLVA-AQRVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGE 61 (400)
Q Consensus 15 ~~~~~-~~~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~ 61 (400)
|..+. .+.++.+...|.|+|-+++=..| |. -|-|+++..+|+++|.
T Consensus 22 P~~e~t~~~l~~l~~~GaDiiElGiPfSD-P~ADGPvIq~a~~rAL~~G~ 70 (262)
T PRK13127 22 PDPEATLEFVKALVKGGADVIELGIPFSD-PVADGPTIQAADVRALSAGM 70 (262)
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCC
T ss_conf 99899999999999769999997898888-77657999999999997699
No 375
>PRK13138 consensus
Probab=61.32 E-value=7.8 Score=19.04 Aligned_cols=197 Identities=12% Similarity=0.142 Sum_probs=80.4
Q ss_pred HHHHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99999999869972665658974988--9999999999983887569987789899999999864210133332233233
Q gi|254780602|r 20 AQRVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVG 97 (400)
Q Consensus 20 ~~~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it 97 (400)
.+.++.+...|.|+|-+++=..| |. -|-|++|..+|+++|.+ . ....++.+.+ ++. .+
T Consensus 30 ~~~~~~l~~~GadiiEiGiPFSD-P~ADGPvIq~A~~rAL~~G~~---~-~~~~~~~~~i----r~~-----~~------ 89 (264)
T PRK13138 30 IIWADALIRGGAGILELGIPFSD-PVADGPVIQKAFKRALAHPFS---M-DKILEITAEI----HKL-----HP------ 89 (264)
T ss_pred HHHHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCCCC---H-HHHHHHHHHH----CCC-----CC------
T ss_conf 99999999779998997998888-666589999999999977990---8-8974467760----335-----89------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCHHHHHHCCC-CCCCCCEEECCCCC
Q ss_conf 4543333222222233223222233332322222222222222222-222232221033310001-22122012113542
Q gi|254780602|r 98 TGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVD-TQQDDNFQVSPEKLEQAI-TPKTKWLFLNSPSN 175 (400)
Q Consensus 98 ~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~-~~~~~~~~~d~~~l~~~i-~~~~k~i~l~nP~N 175 (400)
-+-+++.+..|+ +...++..|...+..+|..-+-+| +..|. .+.+++...+ ..+...|.|++|+.
T Consensus 90 -----~~pivlM~Y~N~-----i~~~G~e~F~~~~~~~GvdGlIipDLP~e~---~E~~~~~~~~~~~~i~~I~liaPtt 156 (264)
T PRK13138 90 -----EIPLVYLTYFNP-----LFSMGLEAFTERAKNSGIQGLIIPDLPFDT---PEAEEFFSQLERKKIDFIHLVTPAT 156 (264)
T ss_pred -----CCCEEEEEEHHH-----HHHHCHHHHHHHHHHCCCCEEECCCCCCCC---HHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf -----888897521238-----988489999999987697758536898650---3359999999986998675217999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf 10000123333211122333332011101221100000122332221112333225741465443223445444221101
Q gi|254780602|r 176 PSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGAL 255 (400)
Q Consensus 176 PTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~ 255 (400)
+.++++++++. ++- -++.++= ... .|.+- .+.++..+.+-.+.+.++ .| .=+||-+..+
T Consensus 157 ------~~~Ri~~i~~~-s~g-FiY~Vs~---~Gv--TG~~~----~~~~~~~~~i~~ik~~t~---~P-v~vGFGIs~~ 215 (264)
T PRK13138 157 ------TEDRIQSMKSF-ASG-FIYYVTS---YGV--TGERG----AIASGLEDRIQMVRKIVG---LP-VCAGFGISTA 215 (264)
T ss_pred ------CHHHHHHHHHH-CCC-EEEEEEC---CCC--CCCCC----CCCHHHHHHHHHHHHHCC---CC-EEEEECCCCH
T ss_conf ------89999999973-888-0898754---566--78765----553769999999997438---98-3886067989
Q ss_pred HHHHHHHHHCCCCCC
Q ss_conf 226875310012223
Q gi|254780602|r 256 SLIKSMIVLQGQQTS 270 (400)
Q Consensus 256 ~li~~l~~~~~~~~~ 270 (400)
+..+.+....+-...
T Consensus 216 e~~~~~~~~ADGvIV 230 (264)
T PRK13138 216 DQAKEISTYADGVII 230 (264)
T ss_pred HHHHHHHHCCCEEEE
T ss_conf 999999834999998
No 376
>TIGR01136 cysKM cysteine synthases; InterPro: IPR005856 This model discriminates cysteine synthases (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblance to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded. Cysteine synthase (O-acetylserine (thiol)-lyase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=60.74 E-value=3.6 Score=21.09 Aligned_cols=107 Identities=18% Similarity=0.274 Sum_probs=55.7
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCC
Q ss_conf 778989999999986421013333223323--34543333222222233223222233332322--22222222222222
Q gi|254780602|r 67 VAGISPLREAIVEKFRRDNDLHYTSDQIIV--GTGAKHVIFNALMATVNMGDEVLIPRPYWVSY--PDMVALCGGIPVFV 142 (400)
Q Consensus 67 ~~G~~~lR~aia~~~~~~~g~~~~~e~I~i--t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y--~~~~~~~g~~~~~v 142 (400)
+.|.=-=|-++.-.....-.-.+.|+.++| |+| .-||.+++-+-. +|=++++.=|-=..- +.+.+.+|++++-.
T Consensus 37 P~gSVKDR~A~~MI~~AE~~G~lk~G~~iiEaTSG-NTGIaLAMvAAa-rGYkliL~MPetmS~ERr~~l~ayGA~L~LT 114 (315)
T TIGR01136 37 PGGSVKDRIALNMILDAEKRGLLKPGTTIIEATSG-NTGIALAMVAAA-RGYKLILTMPETMSLERRKLLKAYGAELILT 114 (315)
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCC-CHHHHHHHHHHH-CCCCEEEECCCCHHHHHHHHHHHCCCEEEEE
T ss_conf 89766568889999999865887888889842778-448999999986-1991899858871789999998709669883
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCC-CCEEE---CCCCCCC
Q ss_conf 22222322210333100012212-20121---1354210
Q gi|254780602|r 143 DTQQDDNFQVSPEKLEQAITPKT-KWLFL---NSPSNPS 177 (400)
Q Consensus 143 ~~~~~~~~~~d~~~l~~~i~~~~-k~i~l---~nP~NPT 177 (400)
|-.+ |..=-.+.-++.+.+.+ +.+++ .||.||-
T Consensus 115 ~~~~--GM~GAi~kA~el~~~~p~~~~~l~QF~NpaNp~ 151 (315)
T TIGR01136 115 PAEE--GMKGAIDKAEELAAETPNKYVMLDQFENPANPE 151 (315)
T ss_pred CCCC--CCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH
T ss_conf 7335--757789999999985889621033258852147
No 377
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase; InterPro: IPR012768 Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (3.2.1.141 from EC). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.; GO: 0004553 hydrolase activity hydrolyzing O-glycosyl compounds, 0005992 trehalose biosynthetic process.
Probab=59.36 E-value=2.1 Score=22.52 Aligned_cols=44 Identities=20% Similarity=0.366 Sum_probs=24.2
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
Q ss_conf 121135421000012333321112233333201110122110000012
Q gi|254780602|r 168 LFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNC 215 (400)
Q Consensus 168 i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~ 215 (400)
|+.=-||||=| ++++|+++++.| ..+++-||.|=+|-||-=+|+
T Consensus 157 Vl~yAp~~~YG---~Pd~Lk~lvDaA-H~~GL~V~LDVVYNHfGPeGN 200 (564)
T TIGR02402 157 VLPYAPHEAYG---GPDDLKALVDAA-HGLGLGVLLDVVYNHFGPEGN 200 (564)
T ss_pred CCCCCCCCCCC---CCHHHHHHHHHH-HHCCCEEEEEEEEECCCCCCC
T ss_conf 44456217787---818999999999-856883887466515588601
No 378
>PRK13112 consensus
Probab=58.91 E-value=7.9 Score=19.00 Aligned_cols=84 Identities=11% Similarity=0.165 Sum_probs=37.7
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
.+...|.+++|+ -+.+++++|++.+ + .-++.++=- .. .|.+- ....+..+.+-.+...++
T Consensus 147 ~~i~~I~lvaPt------t~~eRi~~i~~~s-~-GFiY~Vs~~---Gv--TG~~~----~~~~~~~~~i~~ik~~t~--- 206 (279)
T PRK13112 147 AGINFIRLATPT------TDDKRLPKVLANT-S-GFVYYVSMT---GI--TGSAL----ADTSAVGEAVARIKRHTD--- 206 (279)
T ss_pred CCCCEEEEECCC------CCHHHHHHHHHCC-C-CCEEEEECC---CC--CCCCC----CCHHHHHHHHHHHHHHCC---
T ss_conf 783469982589------9899999998527-8-808998356---66--67664----564889999999997178---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCC
Q ss_conf 3445444221101226875310012
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQGQ 267 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~~ 267 (400)
.| .=+||-+.+++.++.+....+-
T Consensus 207 ~P-v~vGFGIs~~e~~~~~~~~aDG 230 (279)
T PRK13112 207 LP-VCVGFGVKTPEQARAIAAHADG 230 (279)
T ss_pred CC-CEEEECCCCHHHHHHHHCCCCE
T ss_conf 98-7678356999999999725999
No 379
>TIGR01132 pgm phosphoglucomutase, alpha-D-glucose phosphate-specific; InterPro: IPR005852 Phosphoglucomutase, alpha-D-glucose phosphate-specific () links the anaerobic or aerobic glycolysis of glucose-6-phosphate and glucose-1-phosphate produced by various glycan phosphorylases by catalysing the transfer of a phosphate group between C-1 and C-6 of glucose . Alpha-D-glucose 1-phosphate = alpha-D-glucose 6-phosphate.; GO: 0004614 phosphoglucomutase activity, 0005975 carbohydrate metabolic process.
Probab=58.25 E-value=3.2 Score=21.43 Aligned_cols=81 Identities=20% Similarity=0.294 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHC-CCCEEECCCCCCCCCCCHHHHHHHHHHH---------H--CCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 899999999999986-9972665658974988999999999998---------3--887569987789899999999864
Q gi|254780602|r 15 ATLVAAQRVRDLRSK-GIDVLCLTAGEPDFDMPENVKYAVVRAM---------E--RGETKYTAVAGISPLREAIVEKFR 82 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~-g~~ii~l~~G~p~~~~p~~i~~a~~~al---------~--~~~~~Y~~~~G~~~lR~aia~~~~ 82 (400)
.++.|+|.+-|.+++ |. -=++-+|-=.+...+.....+.|.| + ...++|+|+++. =.||--|-+
T Consensus 60 HILAi~QAv~~~R~~~G~-TGP~y~G~DtHaLSEPA~~s~LEVLaAN~v~~~v~tat~~~ryTPTPav---S~AILtyN~ 135 (553)
T TIGR01132 60 HILAITQAVVDYRAAQGI-TGPLYIGKDTHALSEPAFVSALEVLAANQVEVIVQTATENNRYTPTPAV---SHAILTYNK 135 (553)
T ss_pred HHHHHHHHHHHHHHHCCC-CCCEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHH---HHHHHHHCC
T ss_conf 899999999999972782-0351116775425406899999998746725888402247888896466---578874126
Q ss_pred HHCCCCCCCCCCCCCCCCC
Q ss_conf 2101333322332334543
Q gi|254780602|r 83 RDNDLHYTSDQIIVGTGAK 101 (400)
Q Consensus 83 ~~~g~~~~~e~I~it~G~~ 101 (400)
-+. .--+|=||||+.=.
T Consensus 136 G~~--~~lADGIviTPSHN 152 (553)
T TIGR01132 136 GRK--EALADGIVITPSHN 152 (553)
T ss_pred CCC--CCCCCEEEECCCCC
T ss_conf 788--77656147758777
No 380
>COG2875 CobM Precorrin-4 methylase [Coenzyme metabolism]
Probab=57.84 E-value=15 Score=17.33 Aligned_cols=58 Identities=22% Similarity=0.308 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9999999999869972665658974988999999999998388756998778989999999
Q gi|254780602|r 18 VAAQRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIV 78 (400)
Q Consensus 18 ~~~~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia 78 (400)
++.....+..++|++|.+|..|+|+. =-.+.|.|.+ |+.-.-.|.-.+|.+.+-.+-|
T Consensus 63 eIi~~m~~a~~~Gk~VvRLhSGDpsi--YgA~~EQm~~-L~~~gI~yevvPGVss~~AAAA 120 (254)
T COG2875 63 EIIDLMVDAVREGKDVVRLHSGDPSI--YGALAEQMRE-LEALGIPYEVVPGVSSFAAAAA 120 (254)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCHHH--HHHHHHHHHH-HHHCCCCEEEECCCHHHHHHHH
T ss_conf 99999999997588089962699068--8899999999-9976998599379059999999
No 381
>TIGR01138 cysM cysteine synthase B; InterPro: IPR005858 Cysteine synthase B (O-acetylserine (thiol)-lyase, 2.5.1.47 from EC) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid. In bacteria such two forms of the enzyme are known (genes cysK and cysM). CysM differs from CysK (IPR005859 from INTERPRO) in that it can also use thiosulphate instead of sulphide, to produce cysteine thiosulphonate instead of cysteine. ; GO: 0004124 cysteine synthase activity, 0006535 cysteine biosynthetic process from serine.
Probab=57.65 E-value=4.9 Score=20.26 Aligned_cols=115 Identities=20% Similarity=0.244 Sum_probs=65.4
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCC
Q ss_conf 6998778989999999986421013333223323--345433332222222332232222333323--222222222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIV--GTGAKHVIFNALMATVNMGDEVLIPRPYWV--SYPDMVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~i--t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~--~y~~~~~~~g~~ 138 (400)
++-| .|.-.=|-|++-.+.....-++.+-+|+| |+| .-||.+++-+-+ .|=.|.+.-|.=. .=..+.+.+|++
T Consensus 34 ~~NP-aGSVKDRpALSM~~~A~~RG~Ik~G~vlI~ATSG-NTGIALAM~aA~-~G~~~~L~MP~N~s~ERk~~~~AyGA~ 110 (300)
T TIGR01138 34 GNNP-AGSVKDRPALSMILDAEKRGEIKPGDVLIEATSG-NTGIALAMVAAL-KGYKMELLMPDNVSEERKAAMKAYGAE 110 (300)
T ss_pred CCCC-CCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC-CHHHHHHHHHHH-CCCEEEEECCCCCHHHHHHHHHHCCCE
T ss_conf 6599-9874315789999989855885688878971688-678999999985-594289977877457999999862954
Q ss_pred CCCCCCCCCCCCCCHH-HHHHCCCCCCCCCEE---ECCCCCCCCCCCC
Q ss_conf 2222222223222103-331000122122012---1135421000012
Q gi|254780602|r 139 PVFVDTQQDDNFQVSP-EKLEQAITPKTKWLF---LNSPSNPSGVVYS 182 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~-~~l~~~i~~~~k~i~---l~nP~NPTG~v~s 182 (400)
.+-+.-.+.-..-.|+ ++|.+.-. -|-++ ++||.||....+|
T Consensus 111 L~L~~~~~G~~GA~~l~~~l~~~~~--~Kyv~LDQf~Np~Np~AHy~s 156 (300)
T TIGR01138 111 LILVDKEEGMEGARDLARELVQKGE--GKYVLLDQFNNPDNPKAHYYS 156 (300)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCC--CCEEEEEECCCCCCCCCCEEE
T ss_conf 8984423561568999999997379--856997405698886455331
No 382
>TIGR01428 HAD_type_II haloacid dehalogenase, type II; InterPro: IPR006328 These proteins catalyze the hydrolytic dehalogenation of small L-2-haloalkanoic acids to yield the corresponding D-2-hydroxyalkanoic acids . They belong to the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases, class (subfamily) I. Note that the Type I HAD enzymes have not yet been fully characterised, but clearly utilise a substantially different catalytic mechanism and are thus unlikely to be related.; GO: 0019120 hydrolase activity acting on acid halide bonds in C-halide compounds, 0008152 metabolic process.
Probab=57.58 E-value=2.5 Score=22.00 Aligned_cols=113 Identities=21% Similarity=0.179 Sum_probs=57.4
Q ss_pred CCHHHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCC
Q ss_conf 89999999999983887569987-789899999999864210133332233233454333322222223----3223222
Q gi|254780602|r 45 MPENVKYAVVRAMERGETKYTAV-AGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV----NMGDEVL 119 (400)
Q Consensus 45 ~p~~i~~a~~~al~~~~~~Y~~~-~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~----~~Gd~Vl 119 (400)
..+...+.+.++..+ ..-||++ .|+..|++. |..+ +++|||.++.+..+..... ..=|.++
T Consensus 83 ~~~~~~~~L~~~~~~-L~p~pD~~~gL~~L~~~---------G~~l----~iLSNg~~~~~~~~~~~aGvdL~~~Fd~~l 148 (207)
T TIGR01428 83 LDEAAADRLAEAYLR-LPPHPDVPAGLRALKER---------GLRL----AILSNGSPAMLKSLVKHAGVDLDLPFDAVL 148 (207)
T ss_pred CCHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHC---------CCEE----EEECCCCHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 898889999877635-89986618899999764---------3236----521489867899999962887530000101
Q ss_pred C------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCC
Q ss_conf 2------33332322222222222222222222232221033310001221220121135421
Q gi|254780602|r 120 I------PRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNP 176 (400)
Q Consensus 120 v------~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NP 176 (400)
. --|.-..|.-.++.+|..+-.|-+-..|.| |.. .+-+-+-+.++|+=|+||
T Consensus 149 S~d~~~~YKP~P~vY~~~~~~lg~~p~ev~~Vasn~w--D~~---GA~~~G~~~~winR~~~~ 206 (207)
T TIGR01428 149 SADAVRAYKPAPQVYQLALEALGVPPEEVLFVASNAW--DLG---GAKKFGFKTAWINRPGEP 206 (207)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCHHHEEECCCCHH--HHH---HHHHCCCCEEEEECCCCC
T ss_conf 4131235588778888888763687878211014756--789---997769666887468888
No 383
>PRK03619 phosphoribosylformylglycinamidine synthase subunit I; Provisional
Probab=57.52 E-value=6.3 Score=19.61 Aligned_cols=58 Identities=17% Similarity=0.171 Sum_probs=34.6
Q ss_pred CCCCCCCC-CCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 22222222-22322210333100012212201211354210000123333211122333332011
Q gi|254780602|r 138 IPVFVDTQ-QDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHI 201 (400)
Q Consensus 138 ~~~~v~~~-~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~i 201 (400)
..+.+|.- -|++|..|.+.++++..++--++-.|++.||-|+..+ |+-+|.+...++-
T Consensus 133 ~~l~ipVAHgEGr~~~~~~~l~~l~~~~qi~~~Y~d~~NPNGS~~~------IAGI~~~~Grvlg 191 (223)
T PRK03619 133 EVIRIPIAHGEGNYYADEETLKELEGNGQVVFRYVDETNPNGSVND------IAGICNENGNVLG 191 (223)
T ss_pred CEEEEEEECCCCCEECCHHHHHHHHHCCCEEEEECCCCCCCCCHHH------HHEEECCCCCEEE
T ss_conf 8898872448753355999999999789789998999999889646------5285879999988
No 384
>pfam06406 StbA StbA protein. This family consists of several bacterial StbA plasmid stability proteins.
Probab=57.46 E-value=3.7 Score=21.02 Aligned_cols=27 Identities=19% Similarity=0.220 Sum_probs=14.9
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 46544322344544422110122687531
Q gi|254780602|r 235 NGVSKAYAMTGLRIGYAAGALSLIKSMIV 263 (400)
Q Consensus 235 ~S~SK~~~~~G~RiG~~v~~~~li~~l~~ 263 (400)
.+.||.++-++ +|....-..+.+.+..
T Consensus 186 ~~~s~~~g~~~--iGvs~v~~~v~~~L~~ 212 (318)
T pfam06406 186 EGISKIHGDSR--IGVSLVTDAVKSALAT 212 (318)
T ss_pred CCCCEEECCCC--CCHHHHHHHHHHHHHH
T ss_conf 75440104799--7768999999999987
No 385
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=55.46 E-value=16 Score=17.09 Aligned_cols=107 Identities=22% Similarity=0.362 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 999999998642101333322332334543---33322222223322-32222333323222222222222222222222
Q gi|254780602|r 72 PLREAIVEKFRRDNDLHYTSDQIIVGTGAK---HVIFNALMATVNMG-DEVLIPRPYWVSYPDMVALCGGIPVFVDTQQD 147 (400)
Q Consensus 72 ~lR~aia~~~~~~~g~~~~~e~I~it~G~~---~~l~~~~~~~~~~G-d~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~ 147 (400)
+=|..+.+...+.-+..+. |+.+.|+. +++.++-.+ -+-| |.+++..|+|.-- .++
T Consensus 57 eEr~~v~~~~v~~~~grvp---viaG~g~~~t~eai~lak~a-~~~Gad~il~v~PyY~k~----------------~~~ 116 (299)
T COG0329 57 EERKEVLEAVVEAVGGRVP---VIAGVGSNSTAEAIELAKHA-EKLGADGILVVPPYYNKP----------------SQE 116 (299)
T ss_pred HHHHHHHHHHHHHHCCCCC---EEEECCCCCHHHHHHHHHHH-HHCCCCEEEEECCCCCCC----------------CHH
T ss_conf 9999999999999689777---89862877799999999999-970999999848978898----------------979
Q ss_pred CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCC
Q ss_conf 32221033310001221220121135421000012333321112233333201110122
Q gi|254780602|r 148 DNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDI 206 (400)
Q Consensus 148 ~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~ 206 (400)
+ ..-.+..+.++. +..+++.|+| +.||..++.+.+.++++ +.++.=|=|..
T Consensus 117 g-l~~hf~~ia~a~--~lPvilYN~P-~~tg~~l~~e~i~~la~----~~nivgiKd~~ 167 (299)
T COG0329 117 G-LYAHFKAIAEAV--DLPVILYNIP-SRTGVDLSPETIARLAE----HPNIVGVKDSS 167 (299)
T ss_pred H-HHHHHHHHHHHC--CCCEEEEECC-CCCCCCCCHHHHHHHHC----CCCEEEEEECC
T ss_conf 9-999999999851--8998999787-52489999999999827----89889998478
No 386
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=54.96 E-value=17 Score=17.04 Aligned_cols=42 Identities=17% Similarity=0.281 Sum_probs=34.0
Q ss_pred HHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999873979983502289972899962999999999999999998609
Q gi|254780602|r 348 LDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 348 ~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
-||+.+|+++.||-+ +++-|-.++|+-..-+++|.+||++|.
T Consensus 107 NEl~~ylvR~k~iPi-----------LelkYP~s~Eea~~~VnkI~~FL~sLe 148 (152)
T COG4050 107 NELCVYLVRRKGIPI-----------LELKYPRSEEEAIDFVNKIANFLKSLE 148 (152)
T ss_pred CHHHHHHHHHCCCCE-----------EEEECCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 267888764269843-----------887578867999999999999998666
No 387
>pfam09885 DUF2112 Uncharacterized protein conserved in archaea (DUF2112). This domain, found in various hypothetical archaeal proteins, has no known function.
Probab=54.57 E-value=17 Score=17.00 Aligned_cols=42 Identities=14% Similarity=0.252 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999987397998350228997289996299999999999999999860
Q gi|254780602|r 347 DLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 347 ~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
.-|+...|+++.+|= -+.+.|-.++++...-+.++.+||++|
T Consensus 102 tneL~~~lir~k~iP-----------iLEl~YP~~~e~~~~~V~~i~~FL~~L 143 (143)
T pfam09885 102 TNELTKFLIRQKGIP-----------ILELAYPTNEEEAINFVDKINDFLESL 143 (143)
T ss_pred HHHHHHHHHHHCCCC-----------EEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 889999998626985-----------388767897468999999999998609
No 388
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=53.61 E-value=2.9 Score=21.63 Aligned_cols=164 Identities=14% Similarity=0.218 Sum_probs=89.6
Q ss_pred CCEEECCCCCCCC-CCCHHHHHHHHHHHHC-------CCC------CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 9726656589749-8899999999999838-------875------6998778989999999986421013333223323
Q gi|254780602|r 31 IDVLCLTAGEPDF-DMPENVKYAVVRAMER-------GET------KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIV 96 (400)
Q Consensus 31 ~~ii~l~~G~p~~-~~p~~i~~a~~~al~~-------~~~------~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~i 96 (400)
.++|-|. | ++ -.|..+.+++.+.++. +.. +-.|.--.++.-..+... - +--.+++|++
T Consensus 37 ~~~iYL~--N-SLal~pk~~~~~~~~~lD~W~~~~~~~~~khPee~~~~pW~~~~~~~~~l~~~---v--lvA~~~evv~ 108 (444)
T TIGR01814 37 NEVIYLD--N-SLALMPKSAREALKEILDKWAKLAVESHNKHPEEVGKVPWFTLDEALLKLLAD---V--LVAQEKEVVV 108 (444)
T ss_pred CCEEEEE--C-CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHCCCCH---H--EECCCCCEEE
T ss_conf 8779700--4-11236899999999998768999987520571003678862034535314310---0--1116653663
Q ss_pred CCCCCCCCCCCCCCCCCC--CC-----CCCCCCCCCCC--C--CCCCCCCCCCC----CCCCCCC-CCCCCCHHHHHH--
Q ss_conf 345433332222222332--23-----22223333232--2--22222222222----2222222-232221033310--
Q gi|254780602|r 97 GTGAKHVIFNALMATVNM--GD-----EVLIPRPYWVS--Y--PDMVALCGGIP----VFVDTQQ-DDNFQVSPEKLE-- 158 (400)
Q Consensus 97 t~G~~~~l~~~~~~~~~~--Gd-----~Vlv~~P~y~~--y--~~~~~~~g~~~----~~v~~~~-~~~~~~d~~~l~-- 158 (400)
+|..+-=|+.++.++..| .| .||.+.-+||. | +...++.|..+ +.+...+ |+ .+..+++.
T Consensus 109 ~nslT~NLh~ll~~Fy~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~g~~~e~~l~~~~p~~~e~--tLr~~di~~~ 186 (444)
T TIGR01814 109 MNSLTVNLHKLLASFYKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLHGLEPEEHLVQVEPREAEE--TLRLEDILDT 186 (444)
T ss_pred ECHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCC--HHHHHHHHHH
T ss_conf 00433889999998707542477334575651678872799999997467987344126774223442--1107889999
Q ss_pred -CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf -00122122012113542100001233332111223333320111012211
Q gi|254780602|r 159 -QAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 159 -~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~ 208 (400)
+...++.-+|++++=+==||..++ +.+|.+. +++.+.+++.|=||+
T Consensus 187 iE~~~D~~A~v~l~~V~Y~TGQ~fD---m~~~t~~-a~~~~~~~vfDLAHa 233 (444)
T TIGR01814 187 IEKNGDEIALVLLSGVQYYTGQLFD---MRAITRA-AHKRGAIVVFDLAHA 233 (444)
T ss_pred HHHCCCCEEEEEECCCCCCHHHHHH---HHHHHHH-HHCCCCEEEEEHHHH
T ss_conf 9853897899984784430236789---9999999-708976599602221
No 389
>TIGR02311 HpaI 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; InterPro: IPR012689 This entry represents the aldolase which performs the final step unique to the 4-hydroxyphenylacetic acid catabolism pathway in which 2,4-dihydroxyhept-2-ene-1,7-dioic acid is split into pyruvate and succinate-semialdehyde. The gene for enzyme is generally found adjacent to other genes for this pathway.; GO: 0018802 24-dihydroxyhept-2-ene-17-dioate aldolase activity, 0010124 phenylacetate catabolic process.
Probab=53.39 E-value=11 Score=18.02 Aligned_cols=20 Identities=10% Similarity=0.208 Sum_probs=14.4
Q ss_pred EEEECCHHHHHHHHHHHHHH
Q ss_conf 99629999999999999999
Q gi|254780602|r 376 ISYAVSDAILEEACVRIKRF 395 (400)
Q Consensus 376 is~~~~~e~l~~al~rl~~~ 395 (400)
++.+.+.--|..|.++|.+-
T Consensus 228 vAvGVDt~LL~rg~~~L~~~ 247 (249)
T TIGR02311 228 VAVGVDTTLLARGAEALAAR 247 (249)
T ss_pred EEECCHHHHHHHHHHHHHHH
T ss_conf 98521389999999999986
No 390
>TIGR03271 methan_mark_5 putative methanogenesis marker protein 5. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it.
Probab=53.06 E-value=18 Score=16.85 Aligned_cols=42 Identities=17% Similarity=0.188 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHCCEEEECCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 89999999987397998350228997289996299999999999999999860
Q gi|254780602|r 347 DLDFVNGLLEIEKVAVVQGSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 347 ~~~~~~~Ll~~~gV~v~pG~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
.-|+...|+++.+|= -+.+.|-.++++...-+.++.+||++|
T Consensus 101 tneL~~~lir~k~iP-----------iLEl~YP~~~ee~~~~V~~i~~FL~~L 142 (142)
T TIGR03271 101 TNELTVFLVRRKDIP-----------ILELDYPTSEEEGIIFVRKINDFLDSL 142 (142)
T ss_pred HHHHHHHHHHHCCCC-----------EEEEECCCCHHHHHHHHHHHHHHHHCC
T ss_conf 889999998726985-----------388657897258999999999998609
No 391
>TIGR00674 dapA dihydrodipicolinate synthase; InterPro: IPR005263 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta-semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue . Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC, IPR005264 from INTERPRO) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Sinorhizobium meliloti protein mosA , which is involved in the biosynthesis of the rhizopine 3-O-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry . Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel. This family represents a subclass of dihydrodipicolinate synthase. ; GO: 0008840 dihydrodipicolinate synthase activity, 0019877 diaminopimelate biosynthetic process.
Probab=51.71 E-value=2.9 Score=21.62 Aligned_cols=115 Identities=19% Similarity=0.256 Sum_probs=58.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 75699877898999999998642101333322--332334543---3332222222332232222333323222222222
Q gi|254780602|r 61 ETKYTAVAGISPLREAIVEKFRRDNDLHYTSD--QIIVGTGAK---HVIFNALMATVNMGDEVLIPRPYWVSYPDMVALC 135 (400)
Q Consensus 61 ~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e--~I~it~G~~---~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~ 135 (400)
.||=+++.-+.|-.+ +-++-. +...+ .|+.+.||. ++|.++-.+==-+=|-+++.+|+|. -....
T Consensus 41 TTGEs~TLs~EE~~~-~i~~~~-----~~~~~R~pvIaG~GsN~T~Eai~l~~~a~~~G~dg~L~vtPyYN----KP~q~ 110 (288)
T TIGR00674 41 TTGESATLSHEEHKK-VIEFVV-----DLVKGRVPVIAGTGSNATEEAIELTKFAEKLGVDGFLVVTPYYN----KPTQE 110 (288)
T ss_pred CCCCCCCCCHHHHHH-HHHHHH-----HHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC----CCCCC
T ss_conf 558864468888899-999998-----77628778985377325899999999998689568845887551----88821
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 222222222222322210333100012212201211354210000123333211122333332011101
Q gi|254780602|r 136 GGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD 204 (400)
Q Consensus 136 g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D 204 (400)
| ..--++++.+.. +.+ .|+.|.|+ =||..+.+|...+|++.+ .||.=|=|
T Consensus 111 G-------------l~~HFkaia~~~-~lP-iiLYNvPs-RTg~~l~peTv~rLA~~~---~NI~aiKE 160 (288)
T TIGR00674 111 G-------------LYQHFKAIAEEV-DLP-IILYNVPS-RTGVSLEPETVKRLAEEP---NNIVAIKE 160 (288)
T ss_pred H-------------HHHHHHHHHHHC-CCC-EEEECCCC-CCCCCCCHHHHHHHHCCC---CCEEEEEE
T ss_conf 3-------------899999999871-698-89842876-410178628999973016---77068872
No 392
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=50.15 E-value=3.4 Score=21.21 Aligned_cols=26 Identities=8% Similarity=0.125 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 89999999999998699726656589
Q gi|254780602|r 15 ATLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
+.-.|.+.++.|..-...++++.+-+
T Consensus 16 ~~~~ik~~id~ma~~KlN~lH~HLtD 41 (348)
T cd06562 16 SVDSIKRTIDAMAYNKLNVLHWHITD 41 (348)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 89999999999998389567885764
No 393
>PRK13129 consensus
Probab=48.29 E-value=21 Score=16.39 Aligned_cols=38 Identities=24% Similarity=0.330 Sum_probs=19.8
Q ss_pred HHHHHHHCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHCC
Q ss_conf 999999869972665658974988--999999999998388
Q gi|254780602|r 22 RVRDLRSKGIDVLCLTAGEPDFDM--PENVKYAVVRAMERG 60 (400)
Q Consensus 22 ~~~~~~~~g~~ii~l~~G~p~~~~--p~~i~~a~~~al~~~ 60 (400)
.++++...|.|+|-+++=..| |. -|-|++|-.+|+++|
T Consensus 38 ~~~~l~~~GaDiiEiGiPfSD-P~ADGpvIq~A~~~AL~~G 77 (267)
T PRK13129 38 ALLILQENGADLIELGIPYSD-PLADGPVIQAAATRALQSG 77 (267)
T ss_pred HHHHHHHCCCCEEEECCCCCC-CCCCCHHHHHHHHHHHHCC
T ss_conf 999999779999997998888-7765899999999999769
No 394
>pfam08885 GSCFA GSCFA family. This family of proteins are functionally uncharacterized. They have been named GSCFA after a highly conserved N-terminal motif in the alignment.
Probab=46.56 E-value=16 Score=17.17 Aligned_cols=82 Identities=17% Similarity=0.211 Sum_probs=44.3
Q ss_pred HHHHHHCCCCEEECCC---CCCCCCCCHHHHHHHHHHHHCCCC----------CCC-----CCC---CCHHHHHHHHHHH
Q ss_conf 9999986997266565---897498899999999999838875----------699-----877---8989999999986
Q gi|254780602|r 23 VRDLRSKGIDVLCLTA---GEPDFDMPENVKYAVVRAMERGET----------KYT-----AVA---GISPLREAIVEKF 81 (400)
Q Consensus 23 ~~~~~~~g~~ii~l~~---G~p~~~~p~~i~~a~~~al~~~~~----------~Y~-----~~~---G~~~lR~aia~~~ 81 (400)
.+.+...|-++....+ |+- + .|..+.+.+.+++..... .|- ... -..++++.+.+.+
T Consensus 15 ~~~L~~~~f~~~~~e~npfGni-Y-np~si~q~l~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~s~~el~~~~~~~~ 92 (251)
T pfam08885 15 GRKLAYRGFNVLDAESNPFGNI-Y-TPRSILQLLRRALGKKSFTEADIWEQDGRWHDFLAHSPFGFASEEELLAARNEHL 92 (251)
T ss_pred HHHHHHCCCCCCCCCCCCCEEE-E-CHHHHHHHHHHHHCCCCCCHHHHHHCCCEEECHHHCCCCCCCCHHHHHHHHHHHH
T ss_conf 9999985999564343675057-4-6999999999995577788889743488787554438655699999999999999
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 4210133332233233454333322
Q gi|254780602|r 82 RRDNDLHYTSDQIIVGTGAKHVIFN 106 (400)
Q Consensus 82 ~~~~g~~~~~e~I~it~G~~~~l~~ 106 (400)
......=-+.+.+++|-|.+++-..
T Consensus 93 ~~~~~~l~~ad~~iiTLG~~e~w~~ 117 (251)
T pfam08885 93 AEVRAQLKEADVFVFTLGLAEAWRD 117 (251)
T ss_pred HHHHHHHHHCCEEEEECCCEEEEEE
T ss_conf 9999999758999998687248998
No 395
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional
Probab=46.02 E-value=8.6 Score=18.77 Aligned_cols=11 Identities=18% Similarity=0.262 Sum_probs=4.2
Q ss_pred CCCCCCCCCCC
Q ss_conf 33332111223
Q gi|254780602|r 183 QNRLRALADVL 193 (400)
Q Consensus 183 ~~~l~~i~~~~ 193 (400)
+++.+++++.+
T Consensus 246 rk~~e~la~~L 256 (607)
T PRK11057 246 RAKVEDTAARL 256 (607)
T ss_pred HHHHHHHHHHH
T ss_conf 89999999999
No 396
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process.
Probab=45.16 E-value=6.1 Score=19.70 Aligned_cols=130 Identities=19% Similarity=0.227 Sum_probs=72.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC-CCCCEEECC------------CC
Q ss_conf 22223322322223333232222222222222222222223222103331000122-122012113------------54
Q gi|254780602|r 108 LMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP-KTKWLFLNS------------PS 174 (400)
Q Consensus 108 ~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~-~~k~i~l~n------------P~ 174 (400)
...+.++|..+++.+= ..-+.. +.+...+++. |+|.|.+.+++ ++.+|+ |+ |+
T Consensus 16 ~~~l~~~g~~~~~~~~-----~~~~~~-~~~~~~~Dl~-------dP~~l~~~~r~~~Pd~vv-ntAAYT~VD~AE~~~~ 81 (317)
T TIGR01214 16 VQQLSKPGRVVVALTR-----STRLKL-AARWSQLDLT-------DPEALEELLRAIRPDAVV-NTAAYTDVDGAESDPE 81 (317)
T ss_pred HHHCCCCCCEEEEECC-----CCCCCH-HHHHHHHCCC-------CHHHHHHHHHHHCCCEEE-ECCHHCCCCCCCCCHH
T ss_conf 9970788827864368-----777611-3365440622-------468899999852875376-2301101000037777
Q ss_pred -----CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC-CCCCCC----CCCCCCCCCCCCCCCEEEEECCCCCCCC--
Q ss_conf -----2100001233332111223333320111012211-000001----2233222111233322574146544322--
Q gi|254780602|r 175 -----NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYE-HIVYRN----CQFSNIVNVEPSLYERTLVVNGVSKAYA-- 242 (400)
Q Consensus 175 -----NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~-~l~~~~----~~~~s~~~~~~~~~~~~i~~~S~SK~~~-- 242 (400)
|=+| -+.|+++|++ +|+++|. || |.+||| ....+...-+ .-|=+-+++-||..|
T Consensus 82 ~AyavNa~A-------~~~lA~~A~~-~Ga~~vh---~STDYVFDGdfGG~~~~PY~e~D---~~nPlnvYG~SK~~GE~ 147 (317)
T TIGR01214 82 KAYAVNALA-------PQNLARAAAR-VGARLVH---ISTDYVFDGDFGGEGKRPYREDD---ETNPLNVYGQSKLAGEQ 147 (317)
T ss_pred HHHHHHHHH-------HHHHHHHHHH-CCCEEEE---EEECEEECCCCCCCCCCCCCCCC---CCCCCCCCCHHHHHHHH
T ss_conf 876574078-------9999999986-6915999---86342344755788866887646---87984312111568999
Q ss_pred -----CC--C---CCCCCCCC--H---HHHHHHHHHHC
Q ss_conf -----34--4---54442211--0---12268753100
Q gi|254780602|r 243 -----MT--G---LRIGYAAG--A---LSLIKSMIVLQ 265 (400)
Q Consensus 243 -----~~--G---~RiG~~v~--~---~~li~~l~~~~ 265 (400)
++ - +|+.|+.+ . .++++.|.++.
T Consensus 148 a~~~~~~~e~~lIvRTsWlY~~~g~~g~NF~~tMlrLa 185 (317)
T TIGR01214 148 AVRAAGPDENALIVRTSWLYGAGGGSGRNFVKTMLRLA 185 (317)
T ss_pred HHHHHCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHC
T ss_conf 99983799857889852134489988421799999853
No 397
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=44.47 E-value=5.4 Score=20.02 Aligned_cols=25 Identities=4% Similarity=-0.047 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 9999999999998699726656589
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
.-.|.+....|..-...++++.+-+
T Consensus 17 ~~~ik~~id~ma~~KlN~lH~HltD 41 (357)
T cd06563 17 VDEVKRFIDLMALYKLNVFHWHLTD 41 (357)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 9999999999998189478897754
No 398
>KOG1256 consensus
Probab=44.20 E-value=25 Score=16.00 Aligned_cols=93 Identities=20% Similarity=0.369 Sum_probs=45.8
Q ss_pred CEEECCC--CCCCCCCCCCCCCCCCCCC---CCCCCCCEEEC-CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 0121135--4210000123333211122---33333201110-1221100000122332221112333225741465443
Q gi|254780602|r 167 WLFLNSP--SNPSGVVYSQNRLRALADV---LVRNPHVHIIS-DDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 167 ~i~l~nP--~NPTG~v~s~~~l~~i~~~---~a~~~~i~ii~-De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
.|+.++- .||-|..+|...+-..+.. +.+........ ||+| .|++.+. .+++|++....+
T Consensus 259 tI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~~~~dv~----------lSyLPLA-Hi~er~~~~~~~--- 324 (691)
T KOG1256 259 TICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKATVGDDVY----------LSYLPLA-HIFERVVELYTF--- 324 (691)
T ss_pred EEEECCCCCCCCCEEEEECCCEEEHHHHHHHHHHCCCCCCCCCCCEE----------EEECCHH-HHHHHHHHHHHH---
T ss_conf 99974799889855897633211002334443321420126667158----------9807499-999999998664---
Q ss_pred CCCCCCCCCCCCCHH-HHHHHHHHHCCCCCCCCCCC
Q ss_conf 223445444221101-22687531001222332222
Q gi|254780602|r 241 YAMTGLRIGYAAGAL-SLIKSMIVLQGQQTSGACSI 275 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~-~li~~l~~~~~~~~~~~~~~ 275 (400)
.-|-+|||.-++. .+.+.+..++-....++|.+
T Consensus 325 --~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRV 358 (691)
T KOG1256 325 --YIGAKIGFARGDILKLTDDLKELKPTVFPGVPRV 358 (691)
T ss_pred --HCCCEEEEECCCHHHHHHHHHHHCCCEEECCHHH
T ss_conf --1044899962876777899997589477232668
No 399
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is fee
Probab=44.07 E-value=25 Score=15.99 Aligned_cols=50 Identities=16% Similarity=0.232 Sum_probs=33.9
Q ss_pred HHHHHHHHHCCEEEEC-CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999873979983-50228997289996299999999999999999860
Q gi|254780602|r 349 DFVNGLLEIEKVAVVQ-GSSFGHGPSIRISYAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 349 ~~~~~Ll~~~gV~v~p-G~~Fg~~~~iRis~~~~~e~l~~al~rl~~~l~~l 399 (400)
.++..| .+.||.|-= -...+.++...|+|+.+.+++++|++.|++..+.|
T Consensus 18 ~iF~~L-a~~~InVDmIvQ~~~~~~~~disFTv~~~dl~~a~~vl~~~~~~l 68 (75)
T cd04913 18 KIFGAL-AEANINVDMIVQNVSRDGTTDISFTVPKSDLKKALAVLEKLKKEL 68 (75)
T ss_pred HHHHHH-HHCCCCEEEEEECCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHC
T ss_conf 999999-985984799986167899458999904999999999999999864
No 400
>TIGR01591 Fdh-alpha formate dehydrogenase, alpha subunit; InterPro: IPR006478 This group of sequences describe a subset of formate dehydrogenase alpha chains found mainly in the archaea but also in alpha and gamma proteobacteria and a small number of Gram-positive bacteria. The alpha chain contains domains for molybdopterin dinucleotide binding and molybdopterin oxidoreductase. The holo-enzyme also contains beta and gamma subunits. The enzyme catalyzes the oxidation of formate (produced from pyruvate during anaerobic growth) to carbon dioxide with the concomitant release of two electrons and two protons. The enzyme's purpose is to allow growth on formate in some circumstances and, in the case of FdhH in gamma proteobacteria, to pass electrons to hydrogenase (by which process acid is neutralized) . The alpha subunit of a version of nitrate reductase is closely related.; GO: 0008863 formate dehydrogenase activity, 0015942 formate metabolic process, 0009326 formate dehydrogenase complex.
Probab=43.87 E-value=12 Score=17.98 Aligned_cols=56 Identities=18% Similarity=0.401 Sum_probs=33.9
Q ss_pred CCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
Q ss_conf 22222322210333100012212201211354210000123333211122333332011101
Q gi|254780602|r 143 DTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISD 204 (400)
Q Consensus 143 ~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~D 204 (400)
+|+.+.|+.+ +|.++++...+.|++|+.+ -|| ++|..+..++.+.+ ++-+++|+-|
T Consensus 378 ~L~~~~GL~I-pe~~da~~~G~~kalYI~G-Edp---~~sDp~~~~V~~aL-~~lellVVqD 433 (694)
T TIGR01591 378 KLPAEPGLRI-PEMIDAALDGDLKALYIVG-EDP---VISDPDTKKVRKAL-EKLELLVVQD 433 (694)
T ss_pred CCCCCCCCCC-HHHHHHHHCCCEEEEEEEC-CCC---EEECCCHHHHHHHH-HCCCEEEEEC
T ss_conf 1866889732-2378998549716999835-850---22379858999897-5386379707
No 401
>TIGR02397 dnaX_nterm DNA polymerase III, subunits gamma and tau; InterPro: IPR012763 This entry represents the well-conserved first N-terminal domain of DnaX, approx. 365 aa. The full-length product of the dnaX gene in Escherichia coli encodes the DNA polymerase III tau subunit. A translational frameshift leads to early termination and a truncated protein subunit gamma, about 1/3 shorter than tau and present in roughly equal amounts. This frameshift mechanism is not necessarily universal for species with DNA polymerase III but appears conserved in the extreme thermophile Thermus thermophilis.; GO: 0003887 DNA-directed DNA polymerase activity, 0005524 ATP binding, 0006260 DNA replication, 0009360 DNA polymerase III complex.
Probab=42.57 E-value=9.9 Score=18.41 Aligned_cols=39 Identities=18% Similarity=0.379 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHCCC--CCC--CCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 999999999983887--569--98778989999999986421013
Q gi|254780602|r 47 ENVKYAVVRAMERGE--TKY--TAVAGISPLREAIVEKFRRDNDL 87 (400)
Q Consensus 47 ~~i~~a~~~al~~~~--~~Y--~~~~G~~~lR~aia~~~~~~~g~ 87 (400)
++|+++++.|+..+. |.| +.++|.= +..+|+-+.+-.+.
T Consensus 20 ~~iv~tL~NAi~~~ri~HAYLF~GpRGtG--KTS~ARIfAKaLNC 62 (363)
T TIGR02397 20 EHIVKTLKNAIKNGRIAHAYLFSGPRGTG--KTSIARIFAKALNC 62 (363)
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCC--HHHHHHHHHHHHCC
T ss_conf 79999999999718966234502859976--35589999998658
No 402
>TIGR01991 HscA Fe-S protein assembly chaperone HscA; InterPro: IPR010236 Iron-sulphur (FeS) clusters are important cofactors for numerous proteins involved in electron transfer, in redox and non-redox catalysis, in gene regulation, and as sensors of oxygen and iron. These functions depend on the various FeS cluster prosthetic groups, the most common being [2Fe-2S] and [4Fe-4S] . FeS cluster assembly is a complex process involving the mobilisation of Fe and S atoms from storage sources, their assembly into [Fe-S] form, their transport to specific cellular locations, and their transfer to recipient apoproteins. So far, three FeS assembly machineries have been identified, which are capable of synthesising all types of [Fe-S] clusters: ISC (iron-sulphur cluster), SUF (sulphur assimilation), and NIF (nitrogen fixation) systems. The ISC system is conserved in eubacteria and eukaryotes (mitochondria), and has broad specificity, targeting general FeS proteins , . It is encoded by the isc operon (iscRSUA-hscBA-fdx-iscX). IscS is a cysteine desulphurase, which obtains S from cysteine (converting it to alanine) and serves as a S donor for FeS cluster assembly. IscU and IscA act as scaffolds to accept S and Fe atoms, assembling clusters and transfering them to recipient apoproteins. HscA is a molecular chaperone and HscB is a co-chaperone. Fdx is a [2Fe-2S]-type ferredoxin. IscR is a transcription factor that regulates expression of the isc operon. IscX (also known as YfhJ) appears to interact with IscS and may function as an Fe donor during cluster assembly . The SUF system is an alternative pathway to the ISC system that operates under iron starvation and oxidative stress. It is found in eubacteria, archaea and eukaryotes (plastids). The SUF system is encoded by the suf operon (sufABCDSE), and the six encoded proteins are arranged into two complexes (SufSE and SufBCD) and one protein (SufA). SufS is a pyridoxal-phosphate (PLP) protein displaying cysteine desulphurase activity. SufE acts as a scaffold protein that accepts S from SufS and donates it to SufA . SufC is an ATPase with an unorthodox ATP-binding cassette (ABC)-like component. No specific functions have been assigned to SufB and SufD. SufA is homologous to IscA , acting as a scaffold protein in which Fe and S atoms are assembled into [FeS] cluster forms, which can then easily be transferred to apoproteins targets. In the NIF system, NifS and NifU are required for the formation of metalloclusters of nitrogenase in Azotobacter vinelandii, and other organisms, as well as in the maturation of other FeS proteins. Nitrogenase catalyses the fixation of nitrogen. It contains a complex cluster, the FeMo cofactor, which contains molybdenum, Fe and S. NifS is a cysteine desulphurase. NifU binds one Fe atom at its N-terminal, assembling an FeS cluster that is transferred to nitrogenase apoproteins . Nif proteins involved in the formation of FeS clusters can also be found in organisms that do not fix nitrogen . This entry represents the HscA chaperone protein from the SUF system. HscA (or Hsc66) is a specialised bacterial Hsp70-class molecular chaperone that participates in the assembly of iron-sulphur cluster proteins. HscA resembles DnaK, but belongs to a separate clade. HscA interacts with IscU, which is believed to serve as a template for Fe-S cluster formation. The HscA-IscU interaction is facilitated by the J-type co-chaperone protein HscB (or Hsc20), which binds to both HscA and IscU, bringing them into contact with each other. HscA recognises a conserved LPPVK sequence motif at positions 99-103 of IscU .; GO: 0005524 ATP binding, 0016887 ATPase activity, 0051082 unfolded protein binding, 0016226 iron-sulfur cluster assembly.
Probab=40.87 E-value=28 Score=15.69 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=12.8
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 98999999998642101333322332
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLHYTSDQII 95 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~~~~e~I~ 95 (400)
.|..|++|+.++.+.-=.+++||+|+
T Consensus 352 vp~Vr~~VaelFg~~PL~~ldPD~VV 377 (628)
T TIGR01991 352 VPKVREAVAELFGREPLTDLDPDKVV 377 (628)
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHH
T ss_conf 16799999886377878888751424
No 403
>PRK09375 quinolinate synthetase; Provisional
Probab=40.73 E-value=28 Score=15.67 Aligned_cols=50 Identities=14% Similarity=0.181 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHCCC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999986421013-----3332233233454333322222223322322223333
Q gi|254780602|r 71 SPLREAIVEKFRRDNDL-----HYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPY 124 (400)
Q Consensus 71 ~~lR~aia~~~~~~~g~-----~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~ 124 (400)
||. +.+|++....+.+ +.+ .++++..|..- +.-. ..+++|+.+|++|+|.
T Consensus 46 ~eI-q~iAD~vGDSl~La~~A~~~~-a~~IVfcGV~F-MAEt-AkIL~P~k~VllPd~~ 100 (323)
T PRK09375 46 PEI-QDLADFTGDSLELARFAAETD-ADTIVFCGVHF-MAET-AKILSPEKTVLLPDLE 100 (323)
T ss_pred HHH-HHHHHHHCCHHHHHHHHHHCC-CCEEEEECCEE-HHHH-HHHHCCCCCEECCCCC
T ss_conf 899-999886365899999997589-99899957443-3866-8872999815557867
No 404
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=40.25 E-value=6.2 Score=19.65 Aligned_cols=26 Identities=12% Similarity=0.202 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 89999999999998699726656589
Q gi|254780602|r 15 ATLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
+.-.|.+.+..|......++++.+-+
T Consensus 16 ~~~~ik~~iD~ma~~KlN~lH~HltD 41 (311)
T cd06570 16 PVAVIKRQLDAMASVKLNVFHWHLTD 41 (311)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 89999999999998289578885864
No 405
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=39.14 E-value=6.6 Score=19.47 Aligned_cols=26 Identities=8% Similarity=-0.013 Sum_probs=13.3
Q ss_pred CHHHHHHHHHHHHHHCCCCEEECCCC
Q ss_conf 58999999999999869972665658
Q gi|254780602|r 14 SATLVAAQRVRDLRSKGIDVLCLTAG 39 (400)
Q Consensus 14 s~~~~~~~~~~~~~~~g~~ii~l~~G 39 (400)
.+.-.+.+..+.|..-...++++.+-
T Consensus 13 ~~~~~ik~~id~ma~~K~N~lh~Hlt 38 (303)
T cd02742 13 LSVESIKRTIDVLARYKINTFHWHLT 38 (303)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 38999999999999828977889887
No 406
>TIGR02727 MTHFS_bact 5,10-methenyltetrahydrofolate synthetase; InterPro: IPR002698 5-formyltetrahydrofolate cyclo-ligase or methenyl-THF synthetase 6.3.3.2 from EC catalyses the interchange of 5-formyltetrahydrofolate (5-FTHF) to 5-10-methenyltetrahydrofolate, this requires ATP and Mg^2+ . 5-FTHF is used in chemotherapy where it is clinically known as Leucovorin .; GO: 0005524 ATP binding, 0030272 5-formyltetrahydrofolate cyclo-ligase activity, 0009396 folic acid and derivative biosynthetic process.
Probab=39.01 E-value=21 Score=16.38 Aligned_cols=10 Identities=50% Similarity=1.195 Sum_probs=4.6
Q ss_pred CCCCCCCCCC
Q ss_conf 4454442211
Q gi|254780602|r 244 TGLRIGYAAG 253 (400)
Q Consensus 244 ~G~RiG~~v~ 253 (400)
-|.|+||--|
T Consensus 129 ~G~RlGyGgG 138 (183)
T TIGR02727 129 RGYRLGYGGG 138 (183)
T ss_pred CCCEEECCCC
T ss_conf 8867405687
No 407
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=38.85 E-value=26 Score=15.87 Aligned_cols=22 Identities=14% Similarity=0.099 Sum_probs=11.7
Q ss_pred EECCHHHHHHHHHHHHHHHHHC
Q ss_conf 6299999999999999999860
Q gi|254780602|r 378 YAVSDAILEEACVRIKRFCHSL 399 (400)
Q Consensus 378 ~~~~~e~l~~al~rl~~~l~~l 399 (400)
|+.+.+...+-+++++++++++
T Consensus 568 ~~vd~~~w~~e~~~~~~~~~~~ 589 (610)
T PRK04210 568 FSVDVDEWLAELELIEELFEKL 589 (610)
T ss_pred HCCCHHHHHHHHHHHHHHHHHH
T ss_conf 1968899999999999999973
No 408
>PRK08265 short chain dehydrogenase; Provisional
Probab=37.89 E-value=0.72 Score=25.33 Aligned_cols=143 Identities=19% Similarity=0.171 Sum_probs=63.8
Q ss_pred CCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC---C---C
Q ss_conf 233233454333322-22222332232222333323222222222222222222222322210333100012---2---1
Q gi|254780602|r 92 DQIIVGTGAKHVIFN-ALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT---P---K 164 (400)
Q Consensus 92 e~I~it~G~~~~l~~-~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~---~ 164 (400)
+.+++-+|++++|-. +...+.+.|-.|++.+=.=..-....+..|.+...+.+|-. |.+++++.+. + +
T Consensus 6 gKvalVTGgs~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~i~~~~~~~~~~fG~ 80 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGACVAILDIDADNGAAVAASLGERARFIATDIT-----DDAAIERAVATAVARFGG 80 (261)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEECCCC-----CHHHHHHHHHHHHHHHCC
T ss_conf 998999487768999999999987998999979889999999981997289981389-----999999999999998199
Q ss_pred CCCEEECCCC--CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 2201211354--21000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 165 TKWLFLNSPS--NPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 165 ~k~i~l~nP~--NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
.. +++||-. .+.+.-.+.+++++..++-.. ..+.+.-++.. .+.. . ..++|.+.|.+=..+
T Consensus 81 iD-iLVNNAg~~~~~~~~~~~e~w~~~~~vNl~--~~~~~~q~~~~----------~m~~--~--~G~IInisS~~~~~~ 143 (261)
T PRK08265 81 LD-ILVNLACTYVDDGLASSRADWLAALDVNLV--SAAMLAQAAHP----------HLKR--G--GGAIVNFTSISAKVA 143 (261)
T ss_pred CC-EEEECCCCCCCCCCCCCHHHHHHHHHHHHH--HHHHHHHHHHH----------HHHH--C--CCEEEEEEECCCCCC
T ss_conf 87-899857557887343999999999999839--99999999999----------9987--6--977999965330457
Q ss_pred CCCCCCCCCCCHHHH
Q ss_conf 344544422110122
Q gi|254780602|r 243 MTGLRIGYAAGALSL 257 (400)
Q Consensus 243 ~~G~RiG~~v~~~~l 257 (400)
.++ +..|..+...+
T Consensus 144 ~~~-~~~Y~asKaal 157 (261)
T PRK08265 144 QTG-RWLYPASKAAI 157 (261)
T ss_pred CCC-CCHHHHHHHHH
T ss_conf 888-50679999999
No 409
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=37.83 E-value=8.6 Score=18.77 Aligned_cols=26 Identities=8% Similarity=0.059 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 89999999999998699726656589
Q gi|254780602|r 15 ATLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
+.-.|.+.++.|......++++.+-+
T Consensus 15 s~~~ik~~ID~Ma~~KlN~lH~HLtD 40 (326)
T cd06564 15 SMDFLKDIIKTMSWYKMNDLQLHLND 40 (326)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 89999999999998099878888867
No 410
>smart00732 YqgFc Likely ribonuclease with RNase H fold. YqgF proteins are likely to function as an alternative to RuvC in most bacteria, and could be the principal holliday junction resolvases in low-GC Gram-positive bacteria. In Spt6p orthologues, the catalytic residues are substituted indicating that they lack enzymatic functions.
Probab=37.33 E-value=11 Score=18.05 Aligned_cols=57 Identities=16% Similarity=0.302 Sum_probs=33.8
Q ss_pred CCCHHHHHHCCCCC-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE-CCCCC
Q ss_conf 22103331000122-122012113542100001233332111223333320111-01221
Q gi|254780602|r 150 FQVSPEKLEQAITP-KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHII-SDDIY 207 (400)
Q Consensus 150 ~~~d~~~l~~~i~~-~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii-~De~Y 207 (400)
...+.+.|.+.+.+ ++..|++--|.|..|+.- +...+.+++.+.+..++.|+ .||-|
T Consensus 36 ~~~~~~~l~~~i~~~~~~~iviG~P~~~~g~~~-~~~~~~f~~~l~~~~~i~v~~~DEr~ 94 (99)
T smart00732 36 KEADAARLKKLIKKYQPDLIVIGLPLNMNGTAS-RETEEAFAELLKERFNLPVVLVDERL 94 (99)
T ss_pred CHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCC-HHHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 269999999999984998899747524899819-99999999998517899889995897
No 411
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=37.25 E-value=27 Score=15.72 Aligned_cols=91 Identities=12% Similarity=0.148 Sum_probs=46.8
Q ss_pred CCEEECCCCCCCCCC-CHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 972665658974988-9999999999983887-56998778989999999986421013333223323345433332222
Q gi|254780602|r 31 IDVLCLTAGEPDFDM-PENVKYAVVRAMERGE-TKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNAL 108 (400)
Q Consensus 31 ~~ii~l~~G~p~~~~-p~~i~~a~~~al~~~~-~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~ 108 (400)
-|++++|+|+-..++ ...|..++.+..+.|. .-|-+.- +..+ +.+++.+..|..+=+|..+++.++.-
T Consensus 40 GDifD~W~g~~~~~~~~~~v~~~L~~l~~~G~~V~yi~GN-HDfl---lg~~f~~~~g~~~~~~~~~~~~~g~r------ 109 (240)
T PRK05340 40 GDLFEAWIGDDDPSPFAAEIAAALKALSDSGVPCYFMHGN-RDFL---LGKRFAKAAGMTLLPDPTVIDLYGQK------ 109 (240)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECC-CCHH---HHHHHHHHHCCEECCCCEEEEECCEE------
T ss_conf 4577576067867879999999999998569869999168-7255---35689998299882675799889959------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 222332232222333323222222
Q gi|254780602|r 109 MATVNMGDEVLIPRPYWVSYPDMV 132 (400)
Q Consensus 109 ~~~~~~Gd~Vlv~~P~y~~y~~~~ 132 (400)
.++-.||.+-..+..|..+....
T Consensus 110 -~lv~HGD~lc~~D~~Y~~~r~~~ 132 (240)
T PRK05340 110 -VLLLHGDTLCTDDKAYQRFRRKV 132 (240)
T ss_pred -EEEECCCCCCCCCHHHHHHHHHH
T ss_conf -99987983677978999999996
No 412
>PRK13113 consensus
Probab=36.79 E-value=32 Score=15.30 Aligned_cols=82 Identities=10% Similarity=0.174 Sum_probs=36.6
Q ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCC
Q ss_conf 12201211354210000123333211122333332011101221100000122332221112333225741465443223
Q gi|254780602|r 164 KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAM 243 (400)
Q Consensus 164 ~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~ 243 (400)
+...|.+++|+. +.++++++++. +. .-++.++= ... .|.+- ....+..+.+-.+.+.++ .
T Consensus 147 ~l~~I~lvaPtt------~~~Ri~~i~~~-a~-gFiY~Vs~---~Gv--TG~~~----~~~~~~~~~i~~ik~~t~---~ 206 (263)
T PRK13113 147 GLNFIRLATPTT------DDRRLPKVLQN-TS-GFVYYVSI---TGI--TGAAA----AQAADVAPEVARIKAATD---L 206 (263)
T ss_pred CCCEEEEECCCC------CHHHHHHHHHC-CC-CCEEEEEC---CCC--CCCCC----CCHHHHHHHHHHHHHCCC---C
T ss_conf 986799947999------99999999833-89-84899834---556--68775----543779999999985479---9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 44544422110122687531001
Q gi|254780602|r 244 TGLRIGYAAGALSLIKSMIVLQG 266 (400)
Q Consensus 244 ~G~RiG~~v~~~~li~~l~~~~~ 266 (400)
| .=+||-+..++.++.+....+
T Consensus 207 P-v~vGFGI~~~e~~~~~~~~AD 228 (263)
T PRK13113 207 P-VIVGFGITTPEAAQAIAGVAD 228 (263)
T ss_pred C-EEEECCCCCHHHHHHHHCCCC
T ss_conf 8-899837899899999973399
No 413
>PRK11761 cysM cysteine synthase B; Provisional
Probab=36.63 E-value=24 Score=16.11 Aligned_cols=111 Identities=17% Similarity=0.184 Sum_probs=55.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHH-HCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCC
Q ss_conf 699877898999999998642-1013333223-3233454333322222223322322223333-23-222222222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRR-DNDLHYTSDQ-IIVGTGAKHVIFNALMATVNMGDEVLIPRPY-WV-SYPDMVALCGGI 138 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~-~~g~~~~~e~-I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~-y~-~y~~~~~~~g~~ 138 (400)
.+..+.|....|-|..-.... ..| .+.|.. |+-.+++..|+.++..+-. .|=++++.-|. .+ .-....+.+|++
T Consensus 34 E~~nptGS~KdR~A~~~i~~a~~~G-~l~~g~~vveaSSGN~g~alA~~a~~-~G~~~~iv~p~~~s~~k~~~l~~~GAe 111 (296)
T PRK11761 34 EGNNPAGSVKDRPALSMIVQAEKRG-EIKPGDTLIEATSGNTGIALAMAAAI-KGYRMKLIMPENMSQERRAAMRAYGAE 111 (296)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCC-CCCCCCEEEEECCCCHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 2579745829999999999999749-98999879993788679999999998-197479967865788999999974995
Q ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEC---CCCCCCC
Q ss_conf 222222222322210333100012212201211---3542100
Q gi|254780602|r 139 PVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLN---SPSNPSG 178 (400)
Q Consensus 139 ~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~---nP~NPTG 178 (400)
++.+|-+ .++.--. ++.+.+......++++ ||.||-.
T Consensus 112 Vi~~~~~--~~~~~ar-~~a~~l~~~~~~~~~~Q~~N~~N~~a 151 (296)
T PRK11761 112 LILVPKE--QGMEGAR-DLALQMQAEGKGKVLDQFNNPDNPYA 151 (296)
T ss_pred EEEECCC--CCHHHHH-HHHHHHHHCCCCEECCCCCCHHHHHH
T ss_conf 5741777--4568999-99999987349784367788566777
No 414
>TIGR02102 pullulan_Gpos pullulanase, extracellular; InterPro: IPR011838 Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterised members of this family include a surface-located pullulanase from Streptococcus pneumoniae and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity ..
Probab=36.45 E-value=17 Score=16.96 Aligned_cols=36 Identities=17% Similarity=0.461 Sum_probs=16.0
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 1211354210000123333211122333332011101221
Q gi|254780602|r 168 LFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 168 i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
+|=.+|.||.-.+ +|++.|++- ..+.++=+|.|=+|
T Consensus 561 MYS~~P~dP~~RI---~EfK~Li~e-IHkRgMGviLDVVY 596 (1164)
T TIGR02102 561 MYSEDPKDPELRI---AEFKNLINE-IHKRGMGVILDVVY 596 (1164)
T ss_pred CCCCCCCCHHHHH---HHHHHHHHH-HCCCCCEEEEEEEE
T ss_conf 3467788878999---998877777-51589717998773
No 415
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=35.77 E-value=18 Score=16.79 Aligned_cols=112 Identities=17% Similarity=0.173 Sum_probs=53.4
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CCCCCCCCCCCCCCCC
Q ss_conf 8778989999999986421013333223323--345433332222222332232222333-32-3222222222222222
Q gi|254780602|r 66 AVAGISPLREAIVEKFRRDNDLHYTSDQIIV--GTGAKHVIFNALMATVNMGDEVLIPRP-YW-VSYPDMVALCGGIPVF 141 (400)
Q Consensus 66 ~~~G~~~lR~aia~~~~~~~g~~~~~e~I~i--t~G~~~~l~~~~~~~~~~Gd~Vlv~~P-~y-~~y~~~~~~~g~~~~~ 141 (400)
.+.|.-.-|-++.-.......-.+.|...++ |+| +-||.+++.+-. .|=++++.-| +. .....+.+.+|++++.
T Consensus 36 NP~gSvKDR~A~~mI~~Ae~~G~l~pG~tIVE~TSG-NTGIaLA~vaa~-~Gy~~~ivmP~~~S~er~~~l~a~GAevi~ 113 (300)
T COG0031 36 NPGGSVKDRIALYMIEDAEKRGLLKPGGTIVEATSG-NTGIALAMVAAA-KGYRLIIVMPETMSQERRKLLRALGAEVIL 113 (300)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-HHHHHHHHHHHH-CCCCEEEEECCCCCHHHHHHHHHCCCEEEE
T ss_conf 987762577999999999984987999989970897-279999999998-199289995898999999999982998998
Q ss_pred CCCCCCCCCCCHHHHHHCCCCCCCC-CEEE---CCCCCCCCCC
Q ss_conf 2222223222103331000122122-0121---1354210000
Q gi|254780602|r 142 VDTQQDDNFQVSPEKLEQAITPKTK-WLFL---NSPSNPSGVV 180 (400)
Q Consensus 142 v~~~~~~~~~~d~~~l~~~i~~~~k-~i~l---~nP~NPTG~v 180 (400)
+|-.+ +.+.=-.+.+++...+.+. ++++ .||.||-..-
T Consensus 114 t~~~~-g~~~~a~~~a~el~~~~p~~~~~~~Qf~NpaN~~aH~ 155 (300)
T COG0031 114 TPGAP-GNMKGAIERAKELAAEIPGYAVWLNQFENPANPEAHY 155 (300)
T ss_pred CCCCC-CCHHHHHHHHHHHHHHCCCCEECHHHCCCCCCHHHHH
T ss_conf 37987-7459999999999974988367553438964789897
No 416
>PRK05872 short chain dehydrogenase; Provisional
Probab=34.44 E-value=1.1 Score=24.34 Aligned_cols=140 Identities=15% Similarity=0.134 Sum_probs=61.3
Q ss_pred CCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC---CCC-C
Q ss_conf 2332334543333222-2222332232222333323222222222222222222222322210333100012---212-2
Q gi|254780602|r 92 DQIIVGTGAKHVIFNA-LMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAIT---PKT-K 166 (400)
Q Consensus 92 e~I~it~G~~~~l~~~-~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~---~~~-k 166 (400)
..+++-+|++.||-.. ...+.+.|.+|++.+-.-..-.......|.+...+.+|- -|.+++++.+. ++- +
T Consensus 9 gKvalITGassGIG~aiA~~la~~Ga~Vvl~dr~~~~l~~~~~~lg~~~~~~~~DV-----td~~~v~~~v~~i~~~~G~ 83 (296)
T PRK05872 9 GKVVFVTGAARGVGAELARRLHARGAKVALVDLEEAELAALAAELGDRVLTVVADV-----TDLAAMQAAAEEAVERFGG 83 (296)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEEC-----CCHHHHHHHHHHHHHHHCC
T ss_conf 98799927105899999999998799899998999999999998388738999827-----9999999999999997199
Q ss_pred C-EEECCCC-CCCCCC--CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 0-1211354-210000--12333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 167 W-LFLNSPS-NPSGVV--YSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 167 ~-i~l~nP~-NPTG~v--~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
. +++||-. ++.|.+ ++.++++++.++=. .+.+.+.-.+ .+.+.. . ..++|.++|.+-..+
T Consensus 84 iDiLVnNAGi~~~~~~~~~~~e~~~~v~dVNl--~G~~~~~ra~----------lp~m~~--~--~G~IVnisS~ag~~~ 147 (296)
T PRK05872 84 IDVVVANAGIASYGSVLQVDPAAFRRVIDVNL--LGVFHTVRAT----------LPAVIE--R--RGYVLQVSSLAAFAA 147 (296)
T ss_pred CCEEEECCCCCCCCCHHHCCHHHHHHHHHHHH--HHHHHHHHHH----------HHHHHH--C--CCEEEEEECHHHHCC
T ss_conf 87876556257997642199899725842445--9999999999----------999997--7--998999960543245
Q ss_pred CCCCCCCCCCC
Q ss_conf 34454442211
Q gi|254780602|r 243 MTGLRIGYAAG 253 (400)
Q Consensus 243 ~~G~RiG~~v~ 253 (400)
.||. ..|..+
T Consensus 148 ~p~~-~aY~AS 157 (296)
T PRK05872 148 APGM-APYCAS 157 (296)
T ss_pred CCCC-CHHHHH
T ss_conf 8998-079999
No 417
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=33.97 E-value=17 Score=16.96 Aligned_cols=97 Identities=14% Similarity=0.200 Sum_probs=40.2
Q ss_pred HHHHHHCCCC---C-CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 0333100012---2-12201211354210000123333211122333332011101221100000122332221112333
Q gi|254780602|r 153 SPEKLEQAIT---P-KTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLY 228 (400)
Q Consensus 153 d~~~l~~~i~---~-~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~ 228 (400)
..|+|...+. + .+.+|+ ||.+.|.=+..++=++| |+-++-.| +.|...++ .--+.......+
T Consensus 74 EVedLag~l~~lderGvea~~-------~Ga~~S~YQK~Rid~vC-relGlks~-----APLW~~dP-le~~~~~V~e~F 139 (227)
T TIGR00289 74 EVEDLAGQLEELDERGVEAVV-------IGAIESEYQKSRIDKVC-RELGLKSI-----APLWHKDP-LEYLLEEVAEKF 139 (227)
T ss_pred HHHHHHHHHHHHHHCCCCEEE-------ECCEECCHHHHHHHHHH-HHHCCHHC-----CCCCCCCH-HHHHHHHHHCCC
T ss_conf 176662155445530545478-------85341011233577887-77141002-----76013481-799999862336
Q ss_pred CEE---EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
Q ss_conf 225---741465443223445444221101226875310012223
Q gi|254780602|r 229 ERT---LVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTS 270 (400)
Q Consensus 229 ~~~---i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~~ 270 (400)
+.. +.-.++.|.|- |-|| +++.|+.+.++..-...
T Consensus 140 ~v~iv~V~A~GLdeswL--Grri-----dke~Id~L~~l~EkYgi 177 (227)
T TIGR00289 140 EVIIVSVSAEGLDESWL--GRRI-----DKECIDDLKDLSEKYGI 177 (227)
T ss_pred EEEEEEEEEECCCCCCC--CCEE-----CHHHHHHHHHHHHHHCC
T ss_conf 08999998411782236--6200-----66678988632233067
No 418
>PRK10481 hypothetical protein; Provisional
Probab=32.30 E-value=38 Score=14.85 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=16.9
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 41465443223445444221101226875
Q gi|254780602|r 233 VVNGVSKAYAMTGLRIGYAAGALSLIKSM 261 (400)
Q Consensus 233 ~~~S~SK~~~~~G~RiG~~v~~~~li~~l 261 (400)
++..+-+++. +|.|+|.++--++.++..
T Consensus 117 il~~lV~ai~-~~~~lGVvvP~~eQ~~~~ 144 (224)
T PRK10481 117 ILPPLVAAIV-DGHQLGVIVPVEEQLALQ 144 (224)
T ss_pred HHHHHHHHHC-CCCEEEEEECCHHHHHHH
T ss_conf 6689999856-898699996278999999
No 419
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=32.20 E-value=10 Score=18.27 Aligned_cols=27 Identities=7% Similarity=0.113 Sum_probs=15.9
Q ss_pred CHHHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 589999999999998699726656589
Q gi|254780602|r 14 SATLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 14 s~~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
.+.-.|.+.+..|......++++.+-+
T Consensus 19 ~~v~~Ik~~iD~Ma~~KlN~lHwHLtD 45 (445)
T cd06569 19 HSKETVLKLLDQMAAYKLNKLHLHLTD 45 (445)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 689999999999998388646872763
No 420
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=31.46 E-value=39 Score=14.77 Aligned_cols=70 Identities=21% Similarity=0.302 Sum_probs=38.3
Q ss_pred HHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 9999999869972665658974988999999999998388756998-778989999999986421013333223323345
Q gi|254780602|r 21 QRVRDLRSKGIDVLCLTAGEPDFDMPENVKYAVVRAMERGETKYTA-VAGISPLREAIVEKFRRDNDLHYTSDQIIVGTG 99 (400)
Q Consensus 21 ~~~~~~~~~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~~~~Y~~-~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G 99 (400)
--++.++.+|.+|++++. +.+|+.+.+++.+. +-..-+-+. ..++.++-+.+.+.+++. |. ++|.+..|
T Consensus 18 iva~~l~d~GfeVi~lG~----~~s~eeiv~~A~~e-~ad~IglSsL~g~h~~~~~~l~~~L~e~-G~----~di~v~vG 87 (122)
T cd02071 18 VIARALRDAGFEVIYTGL----RQTPEEIVEAAIQE-DVDVIGLSSLSGGHMTLFPEVIELLREL-GA----GDILVVGG 87 (122)
T ss_pred HHHHHHHHCCCEEEECCC----CCCHHHHHHHHHHC-CCCEEEEECCCCCHHHHHHHHHHHHHHC-CC----CCCEEEEE
T ss_conf 999999978976996799----88999999999973-9989999646554478999999999976-99----98469994
Q ss_pred C
Q ss_conf 4
Q gi|254780602|r 100 A 100 (400)
Q Consensus 100 ~ 100 (400)
+
T Consensus 88 G 88 (122)
T cd02071 88 G 88 (122)
T ss_pred C
T ss_conf 5
No 421
>cd06409 PB1_MUG70 The MUG70 protein is a product of the meiotically up-regulated gene 70 which has a role in meiosis and harbors a PB1 domain. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domains depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic amino acid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is
Probab=31.37 E-value=39 Score=14.76 Aligned_cols=43 Identities=23% Similarity=0.232 Sum_probs=25.8
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9877898999999998642101333322332334543333222222233223222233
Q gi|254780602|r 65 TAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPR 122 (400)
Q Consensus 65 ~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~ 122 (400)
.++.|+.+||++|++++ |.+...+ | ...+.-+=+.||.|++.+
T Consensus 18 ~~s~~~~~L~~~V~~rL----g~d~~~~------~-----~~~L~Y~DDEgD~VliTs 60 (86)
T cd06409 18 RPSESLEELRTLISQRL----GDDDFET------H-----LYALSYVDDEGDIVLITS 60 (86)
T ss_pred CCCCCHHHHHHHHHHHH----CCCCCCC------C-----CCEEEEECCCCCEEEEEE
T ss_conf 57689999999999984----8850016------7-----612788748999899940
No 422
>KOG0604 consensus
Probab=30.43 E-value=29 Score=15.61 Aligned_cols=17 Identities=12% Similarity=0.102 Sum_probs=6.7
Q ss_pred CCCCCCCCCCCCCCCCC
Q ss_conf 22233332322222222
Q gi|254780602|r 118 VLIPRPYWVSYPDMVAL 134 (400)
Q Consensus 118 Vlv~~P~y~~y~~~~~~ 134 (400)
..+.+|+|..|....+.
T Consensus 218 ~~L~TPc~TPyYvaPev 234 (400)
T KOG0604 218 GDLMTPCFTPYYVAPEV 234 (400)
T ss_pred CCCCCCCCCCCCCCHHH
T ss_conf 64247766664158777
No 423
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=29.87 E-value=29 Score=15.54 Aligned_cols=135 Identities=14% Similarity=0.146 Sum_probs=67.6
Q ss_pred CCCCEEECCCCCCCCCCCHHHHHHHHHHHHCC-C---CCCCCCCCCHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCC
Q ss_conf 69972665658974988999999999998388-7---569987789899999999864-210133332233233454333
Q gi|254780602|r 29 KGIDVLCLTAGEPDFDMPENVKYAVVRAMERG-E---TKYTAVAGISPLREAIVEKFR-RDNDLHYTSDQIIVGTGAKHV 103 (400)
Q Consensus 29 ~g~~ii~l~~G~p~~~~p~~i~~a~~~al~~~-~---~~Y~~~~G~~~lR~aia~~~~-~~~g~~~~~e~I~it~G~~~~ 103 (400)
.+++++.++.|+ ||-.-.+.+.+.+... . ..+..+.|....|-+...-.. ...| .+.|+..+++..|
T Consensus 11 ~~~~~~~~g~Gn----TPLi~l~~Ls~~lg~~~i~~K~E~~nptGSfK~RgA~~~i~~a~~~g----~~~vv~~SsGN~G 82 (324)
T cd01563 11 TEDDIVSLGEGN----TPLVRAPRLGERLGGKNLYVKDEGLNPTGSFKDRGMTVAVSKAKELG----VKAVACASTGNTS 82 (324)
T ss_pred CCCCCCCCCCCC----CCEEEHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCC----CCEEEEECCHHHH
T ss_conf 999866689898----80546666788709987999863689777869999999999999759----9979997833999
Q ss_pred CCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCC
Q ss_conf 322222223-32232222333323222222222222222222222322210333100012212201211354210
Q gi|254780602|r 104 IFNALMATV-NMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPS 177 (400)
Q Consensus 104 l~~~~~~~~-~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPT 177 (400)
+.++..+-. .-.-.|++|.-+-+.-....+.+|++++.++.+.+ +..+..+.+.+.. ..++.++.||-
T Consensus 83 ~alA~~a~~~G~k~~Iv~p~~~~~~k~~~i~~~GAeVv~v~~~~~-----~~~~~a~~~~~~~-~~~~~~~~n~~ 151 (324)
T cd01563 83 ASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNFD-----DALRLVRELAEEN-WIYLSNSLNPY 151 (324)
T ss_pred HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHH-----HHHHHHHHHHHHC-CCEECCCCCCH
T ss_conf 999999998599657655764389999999955998997589999-----9999999977745-83110456825
No 424
>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]
Probab=29.64 E-value=42 Score=14.58 Aligned_cols=21 Identities=19% Similarity=0.064 Sum_probs=8.5
Q ss_pred HHHHHHHHHHCCCCEEECCCC
Q ss_conf 999999999869972665658
Q gi|254780602|r 19 AAQRVRDLRSKGIDVLCLTAG 39 (400)
Q Consensus 19 ~~~~~~~~~~~g~~ii~l~~G 39 (400)
+...+.++...|---+-+|-|
T Consensus 30 mlPi~e~lD~~G~~slE~WGG 50 (472)
T COG5016 30 MLPIAEALDKVGYWSLEVWGG 50 (472)
T ss_pred HHHHHHHHHHCCEEEEEECCC
T ss_conf 579999987518057874177
No 425
>COG1875 NYN ribonuclease and ATPase of PhoH family domains [General function prediction only]
Probab=29.41 E-value=17 Score=17.00 Aligned_cols=11 Identities=36% Similarity=0.688 Sum_probs=5.2
Q ss_pred CCCCCCCCCHH
Q ss_conf 45444221101
Q gi|254780602|r 245 GLRIGYAAGAL 255 (400)
Q Consensus 245 G~RiG~~v~~~ 255 (400)
|--+||+-+.+
T Consensus 289 G~dIGfLPG~e 299 (436)
T COG1875 289 GEDIGFLPGTE 299 (436)
T ss_pred CCCCCCCCCCH
T ss_conf 53137688843
No 426
>KOG0736 consensus
Probab=29.35 E-value=43 Score=14.55 Aligned_cols=20 Identities=20% Similarity=0.439 Sum_probs=10.2
Q ss_pred CCCCCCCCCCCEEECCCCCC
Q ss_conf 11223333320111012211
Q gi|254780602|r 189 LADVLVRNPHVHIISDDIYE 208 (400)
Q Consensus 189 i~~~~a~~~~i~ii~De~Y~ 208 (400)
+++..|++-++.+++=++|+
T Consensus 447 ~V~~vas~lg~h~~evdc~e 466 (953)
T KOG0736 447 VVRAVASELGLHLLEVDCYE 466 (953)
T ss_pred HHHHHHHHHCCCEEECCHHH
T ss_conf 99999998387257013898
No 427
>PRK10333 putative ligase; Provisional
Probab=29.25 E-value=32 Score=15.32 Aligned_cols=13 Identities=31% Similarity=0.703 Sum_probs=8.2
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 2234454442211
Q gi|254780602|r 241 YAMTGLRIGYAAG 253 (400)
Q Consensus 241 ~~~~G~RiG~~v~ 253 (400)
|..-|.|+||--|
T Consensus 136 FD~~G~RLGyGgG 148 (198)
T PRK10333 136 FDEYGQRLGMGGG 148 (198)
T ss_pred ECCCCCEEECCCC
T ss_conf 6588816366874
No 428
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=29.08 E-value=30 Score=15.50 Aligned_cols=80 Identities=15% Similarity=0.121 Sum_probs=38.4
Q ss_pred CCCCHHHHHHHHHHHH-HHCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7789899999999864-21013333223323-34543333222222233223--22223333232222222222222222
Q gi|254780602|r 67 VAGISPLREAIVEKFR-RDNDLHYTSDQIIV-GTGAKHVIFNALMATVNMGD--EVLIPRPYWVSYPDMVALCGGIPVFV 142 (400)
Q Consensus 67 ~~G~~~lR~aia~~~~-~~~g~~~~~e~I~i-t~G~~~~l~~~~~~~~~~Gd--~Vlv~~P~y~~y~~~~~~~g~~~~~v 142 (400)
+.|....|-+...-.. ...| ...+..+++ .+.+..|..++..+-. -|= .|++|.=.=+.-...++.+|++++.+
T Consensus 28 ptGSfK~Rga~~~i~~a~~~g-~~~~~~~vv~aSsGN~g~alA~~a~~-~Gi~~~I~~p~~~~~~k~~~i~~~GA~Vv~v 105 (291)
T cd01561 28 PGGSVKDRIALYMIEDAEKRG-LLKPGTTIIEPTSGNTGIGLAMVAAA-KGYRFIIVMPETMSEEKRKLLRALGAEVILT 105 (291)
T ss_pred CCCCCHHHHHHHHHHHHHHCC-CCCCCCEEEEECCCCHHHHHHHHHHH-CCCCEEEECCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 777869999999999999819-98899789980898479999999998-0998389647630699999999669889997
Q ss_pred CCCCCC
Q ss_conf 222223
Q gi|254780602|r 143 DTQQDD 148 (400)
Q Consensus 143 ~~~~~~ 148 (400)
+...+.
T Consensus 106 ~~~~~~ 111 (291)
T cd01561 106 PEAEAD 111 (291)
T ss_pred CCCCCC
T ss_conf 798887
No 429
>cd06306 PBP1_TorT-like TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. TorT-like proteins, a periplasmic binding protein family that activates induction of the Tor respiratory system upon trimethylamine N-oxide (TMAO) electron-acceptor binding in bacteria. The Tor respiratory system is consists of three proteins (TorC, TorA, and TorD) and is induced in the presence of TMAO. The TMAO control is tightly regulated by three proteins: TorS, TorT, and TorR. Thus, the disruption of any of these proteins can abolish the Tor respiratory induction. TorT shares homology with the sugar-binding domain of the type I periplasmic binding proteins. The members of TorT-like family bind TMAO or related compounds and are predicted to be involved in signal transduction and/or substrate transport.
Probab=28.95 E-value=11 Score=18.04 Aligned_cols=73 Identities=16% Similarity=0.272 Sum_probs=39.7
Q ss_pred CCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 33332322----22222222222222222223222103331000122122012113542100001233332111223333
Q gi|254780602|r 121 PRPYWVSY----PDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRN 196 (400)
Q Consensus 121 ~~P~y~~y----~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~ 196 (400)
.+|+|... ...++..|.++..+....+++-.--.+.++.+++.++.+|++ +|.+|.+.. .+.+. +.
T Consensus 10 ~npfw~~~~~Ga~~aA~e~G~~v~~~~~~~~~d~~~Qi~~ie~~i~~gvDaIii-~p~d~~al~-------~~~~a-~~- 79 (268)
T cd06306 10 KDAYWLSVNYGMVEEAKRLGVSLKLLEAGGYPNLAKQIAQLEDCAAWGADAILL-GAVSPDGLN-------EILQQ-VA- 79 (268)
T ss_pred CCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEE-CCCCHHHHH-------HHHHH-HH-
T ss_conf 987999999999999999699799995899999999999999999839999998-679867778-------99999-98-
Q ss_pred CCCEEEC
Q ss_conf 3201110
Q gi|254780602|r 197 PHVHIIS 203 (400)
Q Consensus 197 ~~i~ii~ 203 (400)
.++.||.
T Consensus 80 agIPVV~ 86 (268)
T cd06306 80 ASIPVIA 86 (268)
T ss_pred CCCEEEE
T ss_conf 6982999
No 430
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=28.79 E-value=13 Score=17.62 Aligned_cols=25 Identities=16% Similarity=0.114 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf 9999999999998699726656589
Q gi|254780602|r 16 TLVAAQRVRDLRSKGIDVLCLTAGE 40 (400)
Q Consensus 16 ~~~~~~~~~~~~~~g~~ii~l~~G~ 40 (400)
.-.|.+.++.|......++++.+-+
T Consensus 17 ~~~ik~~id~ma~~KlN~lH~HltD 41 (329)
T cd06568 17 VAEVKRYIDLLALYKLNVLHLHLTD 41 (329)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 9999999999998388556888862
No 431
>pfam04704 Zfx_Zfy_act Zfx / Zfy transcription activation region. Zfx and Zfy are transcription factors implicated in mammalian sex determination. This region is found N terminal to multiple copies of a C2H2 Zinc finger (pfam00096). This region has been shown to activate transcription when fused to a GAL4 DNA binding domain.
Probab=28.73 E-value=27 Score=15.72 Aligned_cols=54 Identities=15% Similarity=0.218 Sum_probs=33.1
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 20111012211000001223322211123332257414654432234454442211012268753
Q gi|254780602|r 198 HVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMI 262 (400)
Q Consensus 198 ~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~ 262 (400)
++-=|.||+|.+.+-++....+ ..++.+--.+++|+|. | +.|.++-......+.
T Consensus 239 ~~aeiaDevymeVIVGeEda~~-------~he~q~ed~~~nktf~-P---vaWaAAYGnn~d~~E 292 (330)
T pfam04704 239 NCAEIADEVYMEVIVGEEDAAP-------EHEQQMEDSEVNKTFV-P---VAWAAAYGNNSDGIE 292 (330)
T ss_pred CCHHCCCCEEEEEEECCCCCCC-------CCCCCCCCCCCCCCCC-H---HHHHHHHCCCCCHHH
T ss_conf 5012055301799953656776-------4333110112110232-3---335766378741211
No 432
>cd01539 PBP1_GGBP Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. Periplasmic glucose/galactose-binding protein (GGBP) involved in chemotaxis towards, and active transport of, glucose and galactose in various bacterial species. GGBP is a member of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic GGBP is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=28.71 E-value=9.5 Score=18.53 Aligned_cols=40 Identities=13% Similarity=0.327 Sum_probs=19.1
Q ss_pred HHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 3331000122122012113542100001233332111223333320111
Q gi|254780602|r 154 PEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHII 202 (400)
Q Consensus 154 ~~~l~~~i~~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii 202 (400)
.+.++..|+.++.+|++ +|.++++.. ..++-+ +..+|.||
T Consensus 47 ~~~Ie~~I~qgvD~Iii-~p~d~~~~~-------~~i~~A-~~agIPVI 86 (303)
T cd01539 47 NEQIDTALAKGVDLLAV-NLVDPTAAQ-------TVINKA-KQKNIPVI 86 (303)
T ss_pred HHHHHHHHHCCCCEEEE-ECCCHHHHH-------HHHHHH-HHCCCEEE
T ss_conf 99999999759999999-468733489-------999999-96698499
No 433
>PRK05717 oxidoreductase; Validated
Probab=28.51 E-value=5.1 Score=20.18 Aligned_cols=141 Identities=11% Similarity=0.063 Sum_probs=62.8
Q ss_pred CCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCC------CC
Q ss_conf 33233454333322-222223322322223333232222222222222222222223222103331000122------12
Q gi|254780602|r 93 QIIVGTGAKHVIFN-ALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAITP------KT 165 (400)
Q Consensus 93 ~I~it~G~~~~l~~-~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~------~~ 165 (400)
.+++-+|++.+|-. +...|.+.|-.|++.+-.=.......+..|.+...+.++-. |.+++++.+.. +.
T Consensus 11 KvalITG~s~GIG~aia~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~Dvt-----~~~~v~~~i~~~~~~~G~i 85 (255)
T PRK05717 11 RVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGAKVAKALGENAWFIAMDVA-----DEAQVAAGVAEVLGQFGRL 85 (255)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCEEEEEEECC-----CHHHHHHHHHHHHHHHCCC
T ss_conf 88999587888999999999987998999969889999999984897589993079-----9999999999999982999
Q ss_pred CCEEECC-----CCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
Q ss_conf 2012113-----54210000123333211122333332011101221100000122332221112333225741465443
Q gi|254780602|r 166 KWLFLNS-----PSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKA 240 (400)
Q Consensus 166 k~i~l~n-----P~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~ 240 (400)
.. +++| |++++-.-++.++++++.++-.. +.+.+.-.+ .+... .-..+.|.+.|.+=.
T Consensus 86 d~-lvnNAg~~~~~~~~l~~~~~~~w~~~~~vNl~--g~f~~~k~~-----------~~~m~---~~~G~IInisS~~~~ 148 (255)
T PRK05717 86 DA-LVCNAAIANPHNTTLESLSLAQWNRVLAVNLG--GPMLLAKHC-----------APYLR---AHNGAIVNLASTRAR 148 (255)
T ss_pred CE-EEECCCCCCCCCCCHHHCCHHHHHHHHHHHHH--HHHHHHHHC-----------HHHHH---HCCCCEEEEEECCCC
T ss_conf 89-99877305789998355999999999998604--265776643-----------19887---479986999760145
Q ss_pred CCCCCCCCCCCCCHHH
Q ss_conf 2234454442211012
Q gi|254780602|r 241 YAMTGLRIGYAAGALS 256 (400)
Q Consensus 241 ~~~~G~RiG~~v~~~~ 256 (400)
.+.|| +..|.++-..
T Consensus 149 ~~~~~-~~~Y~asKaa 163 (255)
T PRK05717 149 QSEPD-TEAYAASKGG 163 (255)
T ss_pred CCCCC-CHHHHHHHHH
T ss_conf 47898-3767999999
No 434
>cd01740 GATase1_FGAR_AT Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase. Type 1 glutamine amidotransferase (GATase1)-like domain found in Formylglycinamide ribonucleotide amidotransferase (FGAR-AT). FGAR-AT catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, Pi, and glutamate in the fourth step of the purine biosynthetic pathway. FGAR-AT is a glutamine amidotransferase. Glutamine amidotransferase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. FGAR-AT belongs to the triad family of amidotransferases having a conserved Cys-His-Glu catalytic triad in the glutaminase active site
Probab=28.41 E-value=37 Score=14.91 Aligned_cols=60 Identities=17% Similarity=0.203 Sum_probs=30.7
Q ss_pred CCCCCCCC-CCCCCCCCHHHHHHCCCCCCCCC--------EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
Q ss_conf 22222222-22232221033310001221220--------12113542100001233332111223333320111
Q gi|254780602|r 137 GIPVFVDT-QQDDNFQVSPEKLEQAITPKTKW--------LFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHII 202 (400)
Q Consensus 137 ~~~~~v~~-~~~~~~~~d~~~l~~~i~~~~k~--------i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii 202 (400)
..++++|. .-|++|..+-+.+.+....+--+ .-...|.||.|+..+ |+-+|.+...++-+
T Consensus 140 g~~l~ipvaHgEGr~~~~~~~l~~l~~~~~i~~~~~~~~~~~~~yP~NPNGS~~~------IAGI~s~~Grvlgm 208 (238)
T cd01740 140 GEVLRIPVAHGEGRFYADDETLAELEENGQIAQYVDDDGNVTERYPANPNGSLDG------IAGICNEDGRVLGM 208 (238)
T ss_pred CCEEEEEEECCCEEEECCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCHHC------EEEEECCCCCEEEE
T ss_conf 9888888753723597182878999867956999957998022688899888202------12788799999997
No 435
>TIGR01368 CPSaseIIsmall carbamoyl-phosphate synthase, small subunit; InterPro: IPR006274 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates , . CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate . The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain . CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites . The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein . The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP . There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia . CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains . This entry represents the small subunit of the glutamine-dependent form (6.3.5.5 from EC) of carbamoyl phosphate synthase, CPSase II. The small subunit catalyses the hydrolysis of glutamine to ammonia, which in turn used by the large chain to synthesize carbamoyl phosphate. The C-terminal domain of the small subunit of CPSase has glutamine amidotransferase activity. Note that the sequence from the mammalian urea cycle form has lost the active site Cys, resulting in an ammonia-dependent form, CPSase I (6.3.4.16 from EC). CPSases of pyrimidine biosynthesis, arginine biosynthesis, and the urea cycle may be encoded by one or by several genes, depending on the species. ; GO: 0004086 carbamoyl-phosphate synthase activity, 0006807 nitrogen compound metabolic process.
Probab=28.05 E-value=16 Score=17.16 Aligned_cols=24 Identities=21% Similarity=0.199 Sum_probs=15.8
Q ss_pred EEEEEE-CCH-HHHHHHHHHHHHHHH
Q ss_conf 899962-999-999999999999998
Q gi|254780602|r 374 IRISYA-VSD-AILEEACVRIKRFCH 397 (400)
Q Consensus 374 iRis~~-~~~-e~l~~al~rl~~~l~ 397 (400)
|=||=+ -++ +.++.+++.++++++
T Consensus 241 iflSNGPGDPH~~~~~~i~~~~~l~~ 266 (383)
T TIGR01368 241 IFLSNGPGDPHAAVEPAIETVRELLE 266 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 99908798805678999999999984
No 436
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=27.92 E-value=39 Score=14.81 Aligned_cols=77 Identities=19% Similarity=0.115 Sum_probs=39.7
Q ss_pred CCCCHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 7789899999999864-2101333322332334543333222222233223--222233332322222222222222222
Q gi|254780602|r 67 VAGISPLREAIVEKFR-RDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGD--EVLIPRPYWVSYPDMVALCGGIPVFVD 143 (400)
Q Consensus 67 ~~G~~~lR~aia~~~~-~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd--~Vlv~~P~y~~y~~~~~~~g~~~~~v~ 143 (400)
+.|....|-+...-.. ...+.. ....|+..+++..|+.++..+-. .|= .|++|.-.-+.-....+.+|++++.++
T Consensus 26 ptgSfK~Rga~~~v~~a~~~~~~-~~~~vv~aSsGN~g~a~A~~a~~-~G~~~~i~~p~~~~~~k~~~~~~~GA~vi~~~ 103 (244)
T cd00640 26 PTGSFKDRGALNLILLAEEEGKL-PKGVIIESTGGNTGIALAAAAAR-LGLKCTIVMPEGASPEKVAQMRALGAEVVLVP 103 (244)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHH-CCCCCEEEECCHHHHHHHHHHHHCCCEEEEEC
T ss_conf 88880999999999999984886-69889992785789999998874-69663377675156789998870797799989
Q ss_pred CC
Q ss_conf 22
Q gi|254780602|r 144 TQ 145 (400)
Q Consensus 144 ~~ 145 (400)
.+
T Consensus 104 ~~ 105 (244)
T cd00640 104 GD 105 (244)
T ss_pred CC
T ss_conf 95
No 437
>PRK09701 D-allose transporter subunit; Provisional
Probab=27.57 E-value=12 Score=17.95 Aligned_cols=24 Identities=13% Similarity=0.122 Sum_probs=12.4
Q ss_pred HHHHHCCCCCCCCCEEECCCCCCCC
Q ss_conf 3331000122122012113542100
Q gi|254780602|r 154 PEKLEQAITPKTKWLFLNSPSNPSG 178 (400)
Q Consensus 154 ~~~l~~~i~~~~k~i~l~nP~NPTG 178 (400)
.+.++..|+.++.+|++ +|.+|++
T Consensus 72 i~~Ie~~I~~gvdaIii-~p~d~~a 95 (311)
T PRK09701 72 LQLFEDLSNKNYKGIAF-APLSSVN 95 (311)
T ss_pred HHHHHHHHHCCCCEEEE-ECCCHHH
T ss_conf 99999999759999999-1898778
No 438
>KOG2192 consensus
Probab=27.43 E-value=42 Score=14.56 Aligned_cols=23 Identities=13% Similarity=0.186 Sum_probs=10.4
Q ss_pred HHHHHCCCCCCCCCEEECCCCCC
Q ss_conf 33310001221220121135421
Q gi|254780602|r 154 PEKLEQAITPKTKWLFLNSPSNP 176 (400)
Q Consensus 154 ~~~l~~~i~~~~k~i~l~nP~NP 176 (400)
+.+|.++.+.+-|.+-=|-||--
T Consensus 145 ikelrekcsarlkift~c~p~st 167 (390)
T KOG2192 145 IKELREKCSARLKIFTECCPHST 167 (390)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 78888764255543114489976
No 439
>cd04751 Commd3 COMM_Domain containing protein 3. The COMM Domain is found at the C-terminus of a variety of proteins; presumably all COMM_Domain containing proteins are located in the nucleus and the COMM domain plays a role in protein-protein interactions. Several family members have been shown to bind and inhibit NF-kappaB.
Probab=27.35 E-value=46 Score=14.33 Aligned_cols=26 Identities=12% Similarity=0.303 Sum_probs=21.4
Q ss_pred EEEEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99962999999999999999998609
Q gi|254780602|r 375 RISYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 375 Ris~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
++.|+++.|+|..-+.+||++.++++
T Consensus 66 ~i~F~Cs~EqLQdLv~kLKdA~k~~E 91 (95)
T cd04751 66 DINFTCTLEQLQDLVNKLKDAAKNIE 91 (95)
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf 54688669999999999999999998
No 440
>TIGR02176 pyruv_ox_red pyruvate:ferredoxin (flavodoxin) oxidoreductase; InterPro: IPR011895 The oxidative decarboxylation of pyruvate to acetyl-CoA, a central step in energy metabolism, can occur by two different mechanisms . In mitochondria and aerobic bacteria this reaction is catalysed by the multienzyme complex pyruvate dehydrogenase using NAD as electron acceptor. In anaerobic organisms, however, this reaction is reversibly catalysed by a single enzyme using either ferrodoxin or flavodoxin as the electron acceptor. Pyruvate:ferrodoxin/flavodoxin reductases (PFORs) in this entry occur in both obligately and facultatively anaerobic bacteria and also some eukaryotic microorganisms. These proteins are single-chain enzymes containing a thiamin pyrophosphate cofactor for the cleavage of carbon-carbon bonds next to a carbonyl group, and iron-sulphur clusters for electron transfer. The Desulfovibrio africanus enzyme is currently the only PFOR whose three dimensional structure is known , . It is a homodimer where each subunit contains one thiamin pyrophosphate cofactor and two ferrodoxin-like 4Fe-S clusters and an atypical 4Fe-S cluster. Each monomer is composed of seven domains - domains I, II and VI make intersubunit contacts, while domains III, IV and V are located at the suface of the dimer, and domain VII forms a long arm extending over the other subunit. The cofactor is bound at the interface of domains I and VI and is proximal to the atypical 4Fe-S bound by domain VI, while the ferrodoxin-like 4Fe-S clusters are bound by domain V. Comparison of this enzyme with the multi-chain PFORs shows a correspondance between the domains in this enzyme and the subunits of the multi-chain enzymes.; GO: 0005506 iron ion binding, 0016903 oxidoreductase activity acting on the aldehyde or oxo group of donors, 0006118 electron transport.
Probab=27.10 E-value=47 Score=14.30 Aligned_cols=116 Identities=17% Similarity=0.163 Sum_probs=60.4
Q ss_pred CCEEECCCCCCC--C-----------CCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 972665658974--9-----------889999999999983887569987789899999999864210133332233233
Q gi|254780602|r 31 IDVLCLTAGEPD--F-----------DMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVG 97 (400)
Q Consensus 31 ~~ii~l~~G~p~--~-----------~~p~~i~~a~~~al~~~~~~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it 97 (400)
++.++=+.=||| | ..|..|++.|.+..+=.-..|.... | +|- -|+|+|+|+
T Consensus 208 ~P~vRGTaQNPDIYFQ~REa~N~YY~a~P~IVq~yM~~~a~lTGR~Y~Lfd-----------Y----YGa-pdAE~vIi~ 271 (1194)
T TIGR02176 208 HPEVRGTAQNPDIYFQGREAVNKYYEAVPEIVQKYMDKIAKLTGRSYHLFD-----------Y----YGA-PDAERVIIA 271 (1194)
T ss_pred CCEEECCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCC-----------C----CCC-CCCCCEEEE
T ss_conf 775403465877120454143712101335899999887630576567523-----------3----787-020310440
Q ss_pred CCCC-CCCCCCCCCCCCCCCCCCC-----CCCCCCCC--CCCCCCCCCCCCCC-C-CCC-CCCCCCHHHHHHCCCCCC
Q ss_conf 4543-3332222222332232222-----33332322--22222222222222-2-222-232221033310001221
Q gi|254780602|r 98 TGAK-HVIFNALMATVNMGDEVLI-----PRPYWVSY--PDMVALCGGIPVFV-D-TQQ-DDNFQVSPEKLEQAITPK 164 (400)
Q Consensus 98 ~G~~-~~l~~~~~~~~~~Gd~Vlv-----~~P~y~~y--~~~~~~~g~~~~~v-~-~~~-~~~~~~d~~~l~~~i~~~ 164 (400)
=||. +.+.-++.-|-++|.+|-+ -.|+=..+ ..+.+ -++.+-| + ++| .....|-..++..++-+.
T Consensus 272 MGSvaeTieEtvdyL~~kG~KvGllkVrLYRPF~~~~F~~~lP~--svK~IAVLDRtKEPGa~GEPLYLDV~~A~~e~ 347 (1194)
T TIGR02176 272 MGSVAETIEETVDYLRSKGEKVGLLKVRLYRPFSAETFLAALPK--SVKRIAVLDRTKEPGAAGEPLYLDVRSAFYEM 347 (1194)
T ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHCCC--CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCC
T ss_conf 58566789999999972893276888751279858999984241--10122212355688655684488899886304
No 441
>cd07564 nitrilases_CHs Nitrilases, cyanide hydratase (CH)s, and similar proteins (class 1 nitrilases). Nitrilases (nitrile aminohydrolases, EC:3.5.5.1) hydrolyze nitriles (RCN) to ammonia and the corresponding carboxylic acid. Most nitrilases prefer aromatic nitriles, some prefer arylacetonitriles and others aliphatic nitriles. This group includes the nitrilase cyanide dihydratase (CDH), which hydrolyzes inorganic cyanide (HCN) to produce formate. It also includes cyanide hydratase (CH), which hydrolyzes HCN to formamide. This group includes four Arabidopsis thaliana nitrilases (Ath)NIT1-4. AthNIT1-3 have a strong substrate preference for phenylpropionitrile (PPN) and other nitriles which may originate from the breakdown of glucosinolates. The product of PPN hydrolysis, phenylacetic acid has auxin activity. AthNIT1-3 can also convert indoacetonitrile to indole-3-acetic acid (IAA, auxin), but with a lower affinity and velocity. From their expression patterns, it has been speculated that
Probab=26.50 E-value=29 Score=15.57 Aligned_cols=19 Identities=11% Similarity=0.336 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHCCCCEEEC
Q ss_conf 9999999999869972665
Q gi|254780602|r 18 VAAQRVRDLRSKGIDVLCL 36 (400)
Q Consensus 18 ~~~~~~~~~~~~g~~ii~l 36 (400)
.+.+.++++.++|.|+|-|
T Consensus 21 ~~~~~i~~Aa~~ga~lvvf 39 (297)
T cd07564 21 KACRLIEEAAANGAQLVVF 39 (297)
T ss_pred HHHHHHHHHHHCCCEEEEC
T ss_conf 9999999999889959995
No 442
>COG2057 AtoA Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit [Lipid metabolism]
Probab=26.45 E-value=48 Score=14.23 Aligned_cols=13 Identities=31% Similarity=0.327 Sum_probs=7.2
Q ss_pred CCCEEECCCCCCC
Q ss_conf 9972665658974
Q gi|254780602|r 30 GIDVLCLTAGEPD 42 (400)
Q Consensus 30 g~~ii~l~~G~p~ 42 (400)
+.+++++++|-|.
T Consensus 21 dG~~VnlGIGlPt 33 (225)
T COG2057 21 DGDYVNLGIGLPT 33 (225)
T ss_pred CCCEEEECCCCHH
T ss_conf 9988985578317
No 443
>cd04909 ACT_PDH-BS C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH). The C-terminal ACT domain of the monofunctional, NAD dependent, prephenate dehydrogenase (PDH) enzyme that catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate, found in Bacillus subtilis (BS) and other Firmicutes, Deinococci, and Bacteroidetes. PDH is the first enzyme in the aromatic amino acid pathway specific for the biosynthesis of tyrosine. This enzyme is feedback-inhibited by tyrosine in B. subtilis and other microorganisms. Both phenylalanine and tryptophan have been shown to be inhibitors of this activity in B. subtilis. Bifunctional chorismate mutase-PDH (TyrA) enzymes such as those seen in Escherichia coli do not contain an ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=26.28 E-value=48 Score=14.21 Aligned_cols=57 Identities=25% Similarity=0.284 Sum_probs=35.3
Q ss_pred EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC----CCCCEEEEEEECCHHHHHHHHHHHHH
Q ss_conf 9862641023321133224898999999998739799835022----89972899962999999999999999
Q gi|254780602|r 326 LYPSCQDLIGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSF----GHGPSIRISYAVSDAILEEACVRIKR 394 (400)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~gV~v~pG~~F----g~~~~iRis~~~~~e~l~~al~rl~~ 394 (400)
+++++++-.+.- .+ ...+|.+.||.+..-.-- +..|-+|++|. ++++.++|.+.|++
T Consensus 4 l~vdVpD~pG~I----------a~-vt~~L~~~~IsI~nI~Il~~RE~~~GvLri~F~-~~~d~~~A~~~L~~ 64 (69)
T cd04909 4 LYVDVPDEPGVI----------AE-VTQILGDAGISIKNIEILEIREGIGGILRISFK-TQEDRERAKEILKE 64 (69)
T ss_pred EEEECCCCCCHH----------HH-HHHHHHHCCCCEEEEEEEEEECCCCCEEEEEEC-CHHHHHHHHHHHHH
T ss_conf 999679999869----------99-999999879874724876851478847999968-98999999999998
No 444
>COG1453 Predicted oxidoreductases of the aldo/keto reductase family [General function prediction only]
Probab=26.19 E-value=49 Score=14.20 Aligned_cols=60 Identities=20% Similarity=0.264 Sum_probs=40.2
Q ss_pred HHHHCCCCEEECCCCCCCCCCC-------HHHHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9998699726656589749889-------9999999999838875------6998778989999999986421
Q gi|254780602|r 25 DLRSKGIDVLCLTAGEPDFDMP-------ENVKYAVVRAMERGET------KYTAVAGISPLREAIVEKFRRD 84 (400)
Q Consensus 25 ~~~~~g~~ii~l~~G~p~~~~p-------~~i~~a~~~al~~~~~------~Y~~~~G~~~lR~aia~~~~~~ 84 (400)
++.+.|..+=-|+.|-+.+|.- +.+.+.+..+++.|.+ .|....+.+.+++|++++++..
T Consensus 5 ~~~k~g~~~s~lgfG~MRlp~~~~~~id~~~~~~~i~~aie~GiNyidTA~~Yh~g~sE~~lgkaL~~~~Rek 77 (391)
T COG1453 5 KFPKTGDELSILGFGCMRLPLKEQGSIDEENANETIDYAIEHGINYIDTAWPYHGGESEEFLGKALKDGYREK 77 (391)
T ss_pred HCCCCCCCCCEECCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCE
T ss_conf 1488876232011222302234678744999999999999728764762032458874699999864215113
No 445
>pfam04002 DUF2466 Protein of unknown function (DUF2466). This family was named initially with reference to the E. coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions. However the relevant mutation has subsequently been shown to be in recG, where radC is in fact an allele of recG. In addition, a personal communication from Claverys, J-P, et al, indicates a total failure of all attempts to characterize a radiation-related function for RadC in Streptococcus pneumoniae, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair.
Probab=25.80 E-value=18 Score=16.85 Aligned_cols=58 Identities=17% Similarity=0.305 Sum_probs=29.8
Q ss_pred HHHCCCCCCCCCEEECCCCCCCCCCCC-CCCC---CCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCC
Q ss_conf 310001221220121135421000012-3333---2111223333320111012211000001223322
Q gi|254780602|r 156 KLEQAITPKTKWLFLNSPSNPSGVVYS-QNRL---RALADVLVRNPHVHIISDDIYEHIVYRNCQFSNI 220 (400)
Q Consensus 156 ~l~~~i~~~~k~i~l~nP~NPTG~v~s-~~~l---~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~ 220 (400)
-++.++..+...+++++ |.|+|..-+ .+++ ++|.+.+ +--++.++ | +++..+..+.|+
T Consensus 56 I~~~Al~~~A~~iIl~H-NHPSG~~~PS~~D~~~T~~l~~a~-~~l~I~ll-D----HiIv~~~~~~S~ 117 (123)
T pfam04002 56 IFKRALRLNAAAVILAH-NHPSGDPTPSQADIELTKRLKEAG-ELLGIRLL-D----HIIIGDGGYFSF 117 (123)
T ss_pred HHHHHHHCCCCEEEEEE-CCCCCCCCCCHHHHHHHHHHHHHH-HHCCCEEE-E----EEEEECCCEEEH
T ss_conf 99999983898699983-189998995887999999999999-76898797-3----899969939985
No 446
>COG0061 nadF NAD kinase [Coenzyme metabolism]
Probab=25.70 E-value=17 Score=16.93 Aligned_cols=26 Identities=15% Similarity=0.230 Sum_probs=14.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 32233233454333322222223322
Q gi|254780602|r 90 TSDQIIVGTGAKHVIFNALMATVNMG 115 (400)
Q Consensus 90 ~~e~I~it~G~~~~l~~~~~~~~~~G 115 (400)
+...++++-|+-.-+..+.+.+.+.+
T Consensus 54 ~~~d~ivvlGGDGtlL~~~~~~~~~~ 79 (281)
T COG0061 54 EKADLIVVLGGDGTLLRAARLLARLD 79 (281)
T ss_pred CCCEEEEEECCCHHHHHHHHHHCCCC
T ss_conf 77649999899689999999745569
No 447
>PRK09525 lacZ beta-D-galactosidase; Reviewed
Probab=25.56 E-value=44 Score=14.48 Aligned_cols=25 Identities=12% Similarity=0.259 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHC--CCC-EEECCCCC
Q ss_conf 99999999999986--997-26656589
Q gi|254780602|r 16 TLVAAQRVRDLRSK--GID-VLCLTAGE 40 (400)
Q Consensus 16 ~~~~~~~~~~~~~~--g~~-ii~l~~G~ 40 (400)
.-.+..++..|... ++. ||--|.||
T Consensus 434 ~~a~ldR~~rmv~RDKNHPSII~WSLGN 461 (1027)
T PRK09525 434 LPAMSERVTRMVQRDRNHPSIIIWSLGN 461 (1027)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECC
T ss_conf 9999999999988515886389996045
No 448
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ; InterPro: IPR012802 Members of this family represent the alpha subunit of the multifunctional enzyme complex of the fatty acid degradation cycle, which plays a minor role in aerobic beta-oxidation of fatty acids. The FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (4.2.1.17 from EC), 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC), and 3-hydroxybutyryl-CoA epimerase (5.1.2.3 from EC). A representative is the Escherichia coli FadJ protein (also named YfcX) (P77399 from SWISSPROT). This entry excludes FadB of IPR012799 from INTERPRO.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0004300 enoyl-CoA hydratase activity, 0008692 3-hydroxybutyryl-CoA epimerase activity, 0051287 NAD binding, 0006635 fatty acid beta-oxidation, 0016507 fatty acid beta-oxidation multienzyme complex.
Probab=25.34 E-value=50 Score=14.11 Aligned_cols=29 Identities=17% Similarity=0.390 Sum_probs=15.0
Q ss_pred CCCCCCCCCCCCCCCCCCCC----CCCCCCCCCC
Q ss_conf 33233454333322222223----3223222233
Q gi|254780602|r 93 QIIVGTGAKHVIFNALMATV----NMGDEVLIPR 122 (400)
Q Consensus 93 ~I~it~G~~~~l~~~~~~~~----~~Gd~Vlv~~ 122 (400)
++++|+- ++||-.+|.+.+ ++|..=..|.
T Consensus 273 EL~m~~~-S~ALRSiFFAtT~~KKe~Gs~GA~p~ 305 (732)
T TIGR02440 273 ELVMSPE-SAALRSIFFATTEMKKETGSDGATPR 305 (732)
T ss_pred CCCCCHH-HHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 4223602-46778788863003467787777632
No 449
>TIGR01873 cas_CT1978 CRISPR-associated protein Cas2; InterPro: IPR010152 This entry represents a minor branch of the Cas2 family of CRISPR-associated protein which are found in IPR003799 from INTERPRO. Cas proteins are found adjacent to a characteristic short, palindromic repeat cluster termed CRISPR, a probable mobile DNA element..
Probab=24.01 E-value=53 Score=13.95 Aligned_cols=69 Identities=9% Similarity=0.031 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 899999999999838875-6998778989999999986421013333223323345433332-222222332
Q gi|254780602|r 45 MPENVKYAVVRAMERGET-KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIF-NALMATVNM 114 (400)
Q Consensus 45 ~p~~i~~a~~~al~~~~~-~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~-~~~~~~~~~ 114 (400)
.||.++=.++-.+-+-.- =|-.+.=...+|+.|-+++.+.|| .++..++++|..+.-.-- ..|.++-++
T Consensus 9 ~ppr~RGrL~~wl~E~rAgVYv~P~~~~~vr~~iwd~l~q~yG-~~~~g~~v~~wa~~t~~GG~~~~~lG~~ 79 (91)
T TIGR01873 9 VPPRLRGRLALWLLEVRAGVYVGPRVSAKVRERIWDELAQLYG-CLEKGSIVITWASNTESGGFEFATLGEN 79 (91)
T ss_pred CCCCHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHCCCCC-CCCCCCEEEEECCCCCCCCCEEEECCCC
T ss_conf 9900125788888751788223576263678888886512225-3475877887448788867123305855
No 450
>KOG1252 consensus
Probab=23.93 E-value=11 Score=18.02 Aligned_cols=99 Identities=16% Similarity=0.164 Sum_probs=49.3
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC---HHHHHHCCCCCCCCCEE--
Q ss_conf 345433332222222332232222333323222--22222222222222222232221---03331000122122012--
Q gi|254780602|r 97 GTGAKHVIFNALMATVNMGDEVLIPRPYWVSYP--DMVALCGGIPVFVDTQQDDNFQV---SPEKLEQAITPKTKWLF-- 169 (400)
Q Consensus 97 t~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~--~~~~~~g~~~~~v~~~~~~~~~~---d~~~l~~~i~~~~k~i~-- 169 (400)
|+| .-|+.+++.+-+ .|=++++.-|..-.-+ ..++.+|++++..|... ++.- -.+.-+...++-+.+++
T Consensus 111 TSG-NtGigLA~~~a~-~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~tp~a~--~~~~~e~ai~~a~~l~~~~pna~~l~ 186 (362)
T KOG1252 111 TSG-NTGIGLAYMAAL-RGYKCIITMPEKMSKEKRILLRALGAEIILTPPAA--GMKGPESAIGKAEELLNKTPNAYILD 186 (362)
T ss_pred CCC-CHHHHHHHHHHH-CCCEEEEEECHHHHHHHHHHHHHCCCEEEECCHHH--CCCCHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 998-538999999997-39639999042451789999997188799568687--24771889999999998688738788
Q ss_pred -ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf -11354210000123333211122333332011
Q gi|254780602|r 170 -LNSPSNPSGVVYSQNRLRALADVLVRNPHVHI 201 (400)
Q Consensus 170 -l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~i 201 (400)
++||.||. . .....-.+|..-+..+-|+++
T Consensus 187 Qf~np~Np~-~-hy~ttg~EI~~q~~g~vDi~V 217 (362)
T KOG1252 187 QFHNPGNPL-A-HYETTGPEIWRQLDGKVDIFV 217 (362)
T ss_pred HHCCCCCCC-C-CCCCCCHHHHHHHCCCCCEEE
T ss_conf 742888853-0-125642899998269977899
No 451
>pfam07302 AroM AroM protein. This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL. The function of this family is unknown.
Probab=23.76 E-value=54 Score=13.92 Aligned_cols=28 Identities=11% Similarity=0.167 Sum_probs=17.0
Q ss_pred EECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 41465443223445444221101226875
Q gi|254780602|r 233 VVNGVSKAYAMTGLRIGYAAGALSLIKSM 261 (400)
Q Consensus 233 ~~~S~SK~~~~~G~RiG~~v~~~~li~~l 261 (400)
++.++-+++. +|-|+|.++--++.++..
T Consensus 114 il~~lV~a~~-~~~~lGVvvP~~eQ~~~~ 141 (221)
T pfam07302 114 ILPPLVASIV-DGHQLGVIVPLPEQISQQ 141 (221)
T ss_pred HHHHHHHHHC-CCCEEEEEECCHHHHHHH
T ss_conf 6789999867-898599995579999999
No 452
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein; InterPro: IPR011918 This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins ..
Probab=23.29 E-value=45 Score=14.41 Aligned_cols=10 Identities=30% Similarity=0.600 Sum_probs=5.3
Q ss_pred CHHHHHHCCC
Q ss_conf 1033310001
Q gi|254780602|r 152 VSPEKLEQAI 161 (400)
Q Consensus 152 ~d~~~l~~~i 161 (400)
.||+++.+.+
T Consensus 407 ~dP~~lR~~~ 416 (576)
T TIGR02204 407 LDPADLRARI 416 (576)
T ss_pred CCCHHHHHHC
T ss_conf 6808788344
No 453
>PRK10717 cysteine synthase A; Provisional
Probab=23.22 E-value=53 Score=13.95 Aligned_cols=80 Identities=20% Similarity=0.145 Sum_probs=41.4
Q ss_pred CCCCCCCHHHHHHHHHHHHH-HCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99877898999999998642-1013333223-32334543333222222233223--22223333232222222222222
Q gi|254780602|r 64 YTAVAGISPLREAIVEKFRR-DNDLHYTSDQ-IIVGTGAKHVIFNALMATVNMGD--EVLIPRPYWVSYPDMVALCGGIP 139 (400)
Q Consensus 64 Y~~~~G~~~lR~aia~~~~~-~~g~~~~~e~-I~it~G~~~~l~~~~~~~~~~Gd--~Vlv~~P~y~~y~~~~~~~g~~~ 139 (400)
+-.+.|....|-|..--... +.| .+.|.. |+-.+++..|+.++..+-. .|= .|++|.=.=..-...++.+|+++
T Consensus 36 ~~nptGS~KdR~A~~~i~~a~~~G-~l~~g~~vveaSSGN~g~alA~~a~~-~G~~~~iv~p~~~~~~k~~~i~~~GAeV 113 (334)
T PRK10717 36 FLNPGGSVKDRAALNIIRDAEKRG-LLKPGGTIVEGTAGNTGIGLALVAAA-RGYKTVIVMPETQSQEKKDLLRALGAEL 113 (334)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCC-CCCCCCEEEEECCCCHHHHHHHHHHH-CCCCEEEEECCCCHHHHHHHHHHCCCEE
T ss_conf 589756819999999999999839-98899889982797389999999998-0996599956854599999999759839
Q ss_pred CCCCCC
Q ss_conf 222222
Q gi|254780602|r 140 VFVDTQ 145 (400)
Q Consensus 140 ~~v~~~ 145 (400)
+.++..
T Consensus 114 i~v~~~ 119 (334)
T PRK10717 114 VEVPAV 119 (334)
T ss_pred EECCCC
T ss_conf 976885
No 454
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=23.14 E-value=55 Score=13.85 Aligned_cols=49 Identities=14% Similarity=0.049 Sum_probs=22.6
Q ss_pred CHHHHHHHHHHHHHHCCCC--CC---C--CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 9899999999864210133--33---2--23323345433332222222332232222
Q gi|254780602|r 70 ISPLREAIVEKFRRDNDLH--YT---S--DQIIVGTGAKHVIFNALMATVNMGDEVLI 120 (400)
Q Consensus 70 ~~~lR~aia~~~~~~~g~~--~~---~--e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv 120 (400)
.-.|...|+++.... ||. +. + ..|.|--++-.||..+ .-|...|-.|-|
T Consensus 283 Ig~LERfi~D~a~~~-g~~p~~~~~~~~gkKVAVIGsGPAGLaaA-~~Lar~G~~VTV 338 (639)
T PRK12809 283 IGNLERYITDTALAM-GWRPDVSKVVPRSEKVAVIGAGPAGLGCA-DILARAGVQVDV 338 (639)
T ss_pred ECHHHHHHHHHHHHH-CCCCCCCCCCCCCCEEEEECCCHHHHHHH-HHHHHCCCCEEE
T ss_conf 888999999999983-99888777688899899989758999999-999975990699
No 455
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein; InterPro: IPR012693 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.; GO: 0005524 ATP binding, 0015416 phosphonate transmembrane-transporting ATPase activity, 0015716 phosphonate transport, 0016020 membrane.
Probab=23.02 E-value=25 Score=15.93 Aligned_cols=25 Identities=24% Similarity=0.339 Sum_probs=10.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 54333322222223322322223333
Q gi|254780602|r 99 GAKHVIFNALMATVNMGDEVLIPRPY 124 (400)
Q Consensus 99 G~~~~l~~~~~~~~~~Gd~Vlv~~P~ 124 (400)
++.++|.. +..-++||+=|.+-.|+
T Consensus 13 ~g~~~LK~-inl~i~~GE~~~~IG~S 37 (253)
T TIGR02315 13 NGKQALKN-INLEINPGEFVAVIGPS 37 (253)
T ss_pred CCCEEEEE-ECCEEECCEEEEEECCC
T ss_conf 98378853-11434165179997378
No 456
>TIGR00715 precor6x_red precorrin-6x reductase; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase . In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase . There are at least two distinct cobalamin biosynthetic pathways in bacteria : Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway ; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis ; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) . There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y , .; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process.
Probab=22.85 E-value=28 Score=15.68 Aligned_cols=13 Identities=15% Similarity=0.256 Sum_probs=8.3
Q ss_pred HHHHHHHHHHHCC
Q ss_conf 9999999998609
Q gi|254780602|r 388 ACVRIKRFCHSLQ 400 (400)
Q Consensus 388 al~rl~~~l~~l~ 400 (400)
-++++.+|+.+|+
T Consensus 247 ~~~~~~~~v~~~~ 259 (260)
T TIGR00715 247 DIDELAKFVAKLL 259 (260)
T ss_pred CHHHHHHHHHHCC
T ss_conf 7799999996148
No 457
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=22.63 E-value=28 Score=15.69 Aligned_cols=40 Identities=13% Similarity=0.154 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999864210133332233233454333322222223
Q gi|254780602|r 72 PLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATV 112 (400)
Q Consensus 72 ~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~ 112 (400)
...+.+.+|+....+.+--.+.+.+-.| .+++..++...+
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~Av~HLfrVas 101 (311)
T cd05213 62 KLADELEELLAELLNEPELREYLYVGRG-QDAVRHLFRVAS 101 (311)
T ss_pred HHHHHHHHHHHHCCCHHHHCCCEEEECC-HHHHHHHHHHHH
T ss_conf 3899999998730880332043578647-899999999872
No 458
>TIGR00877 purD phosphoribosylamine--glycine ligase; InterPro: IPR000115 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) catalyzes the second step in the de novo biosynthesis of purine: ATP + 5-phosphoribosylamine + glycine = ADP + P_i + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART.; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process.
Probab=22.44 E-value=57 Score=13.76 Aligned_cols=26 Identities=23% Similarity=0.207 Sum_probs=17.5
Q ss_pred EE-EEECCHHHHHHHHHHHHHHHHHCC
Q ss_conf 99-962999999999999999998609
Q gi|254780602|r 375 RI-SYAVSDAILEEACVRIKRFCHSLQ 400 (400)
Q Consensus 375 Ri-s~~~~~e~l~~al~rl~~~l~~l~ 400 (400)
|+ +.+..-++|.+|-++=.+.++.++
T Consensus 417 RVL~V~a~g~~l~eA~~~Ay~a~~~i~ 443 (459)
T TIGR00877 417 RVLAVVALGKDLEEARERAYEAVEKIK 443 (459)
T ss_pred EEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 399998326257899999999887513
No 459
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=22.08 E-value=35 Score=15.03 Aligned_cols=10 Identities=50% Similarity=0.624 Sum_probs=4.6
Q ss_pred CEEEEECCCCC
Q ss_conf 22574146544
Q gi|254780602|r 229 ERTLVVNGVSK 239 (400)
Q Consensus 229 ~~~i~~~S~SK 239 (400)
+| |.+++-|-
T Consensus 176 ~R-i~v~G~Sq 185 (321)
T COG3458 176 ER-IGVTGGSQ 185 (321)
T ss_pred HH-EEEECCCC
T ss_conf 14-67733666
No 460
>TIGR02177 PorB_KorB 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; InterPro: IPR011896 A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This entry describes the beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes..
Probab=21.72 E-value=59 Score=13.67 Aligned_cols=60 Identities=20% Similarity=0.275 Sum_probs=36.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69987789899999999864210133332233233454333322222223322322223333232222222222222222
Q gi|254780602|r 63 KYTAVAGISPLREAIVEKFRRDNDLHYTSDQIIVGTGAKHVIFNALMATVNMGDEVLIPRPYWVSYPDMVALCGGIPVFV 142 (400)
Q Consensus 63 ~Y~~~~G~~~lR~aia~~~~~~~g~~~~~e~I~it~G~~~~l~~~~~~~~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~v 142 (400)
..||..|..--++|+.+=+.. ++++|+||+|.+| |-.+.++ |.|.+-..+..++| +.+++
T Consensus 2 ~WCPGCGDFGIL~AL~~AL~E---L~LdP~qvvVVSG----IGCS~kt------------PhY~n~~g~h~LHG-RA~P~ 61 (302)
T TIGR02177 2 DWCPGCGDFGILSALQKALAE---LNLDPEQVVVVSG----IGCSAKT------------PHYVNVNGFHGLHG-RALPV 61 (302)
T ss_pred CCCCCCCCHHHHHHHHHHHHH---HCCCCCCEEEEEC----CCCCCCC------------CCCCCCCCCCCCCC-CCCHH
T ss_conf 868898867789999999986---2889852799813----1311347------------73001366452335-63101
No 461
>PRK12564 carbamoyl phosphate synthase small subunit; Reviewed
Probab=21.63 E-value=28 Score=15.69 Aligned_cols=11 Identities=36% Similarity=0.893 Sum_probs=3.8
Q ss_pred CEEECC-CCCCC
Q ss_conf 012113-54210
Q gi|254780602|r 167 WLFLNS-PSNPS 177 (400)
Q Consensus 167 ~i~l~n-P~NPT 177 (400)
+|+|+| |.||.
T Consensus 215 GIflSNGPGDP~ 226 (355)
T PRK12564 215 GVFLSNGPGDPA 226 (355)
T ss_pred EEEECCCCCCHH
T ss_conf 899679999968
No 462
>KOG3220 consensus
Probab=21.52 E-value=6.5 Score=19.50 Aligned_cols=79 Identities=16% Similarity=0.323 Sum_probs=43.2
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC-C-CCCCCEE--ECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 233332322222222222222222222232221033310001-2-2122012--11354210000123333211122333
Q gi|254780602|r 120 IPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVSPEKLEQAI-T-PKTKWLF--LNSPSNPSGVVYSQNRLRALADVLVR 195 (400)
Q Consensus 120 v~~P~y~~y~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i-~-~~~k~i~--l~nP~NPTG~v~s~~~l~~i~~~~a~ 195 (400)
+..|++|.|..+.+..|-++ +.+++ .++.+.|-+.+ + ++-+.++ +++| .+..+-++++....++
T Consensus 38 vv~PG~p~~~~ive~FG~ei----Ll~~G--~inR~~LG~~vF~~~~~r~~Ln~IthP------~Ir~em~ke~~~~~l~ 105 (225)
T KOG3220 38 VVEPGTPAYRRIVEAFGTEI----LLEDG--EINRKVLGKRVFSDPKKRQALNKITHP------AIRKEMFKEILKLLLR 105 (225)
T ss_pred HHCCCCHHHHHHHHHHCCEE----ECCCC--CCCHHHHHHHHHCCHHHHHHHHHCCCH------HHHHHHHHHHHHHHHC
T ss_conf 85599807899999848400----05688--416899867870898899998731338------9999999999999966
Q ss_pred CCCCEEECCCCCCCCCCCC
Q ss_conf 3320111012211000001
Q gi|254780602|r 196 NPHVHIISDDIYEHIVYRN 214 (400)
Q Consensus 196 ~~~i~ii~De~Y~~l~~~~ 214 (400)
-+ -++|.|-+ +.|+.
T Consensus 106 G~-r~ivlDiP---LLFE~ 120 (225)
T KOG3220 106 GY-RVIVLDIP---LLFEA 120 (225)
T ss_pred CC-EEEEEECH---HHHHH
T ss_conf 88-28999226---88887
No 463
>TIGR01737 FGAM_synth_I phosphoribosylformylglycinamidine synthase I; InterPro: IPR010075 In some species, phosphoribosylformylglycinamidine synthase is composed of a single polypeptide chain. This entry describes the PurQ protein of Bacillus subtilis (where PurL, PurQ, and PurS are required for phosphoribosylformylglycinamidine synthase activity) and functionally equivalent proteins from other bacteria and archaea.; GO: 0004642 phosphoribosylformylglycinamidine synthase activity, 0006189 'de novo' IMP biosynthetic process, 0005737 cytoplasm.
Probab=21.47 E-value=60 Score=13.64 Aligned_cols=136 Identities=16% Similarity=0.217 Sum_probs=69.8
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC-CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC--CCCCCCCCH
Q ss_conf 0001233332111223333320111012211000-0012233222111233322574146544322344--544422110
Q gi|254780602|r 178 GVVYSQNRLRALADVLVRNPHVHIISDDIYEHIV-YRNCQFSNIVNVEPSLYERTLVVNGVSKAYAMTG--LRIGYAAGA 254 (400)
Q Consensus 178 G~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~-~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~~~G--~RiG~~v~~ 254 (400)
|+.-+.+...++.+++=.+ -.+|-.-.=|.+.. +++.+ |... +|-||.=++|| .| +|+|.+.+-
T Consensus 10 GtNCd~D~~~A~~k~~Gv~-~~~Vhikqw~~D~~r~~~~r--svfD-----~D~VvlPGGFS-----yGDYLRaGAIAa~ 76 (264)
T TIGR01737 10 GTNCDRDTVYALEKLLGVD-AEIVHIKQWYEDKSRLSDQR--SVFD-----YDAVVLPGGFS-----YGDYLRAGAIAAL 76 (264)
T ss_pred CCCCHHHHHHHHHHHCCCC-EEEEEEEECHHHHCCCCCCC--EEEE-----EEEEEECCCCC-----HHHHHHHHHHHHH
T ss_conf 9984089999999714998-37998652100004787664--1787-----33488668777-----2357779999987
Q ss_pred ---HHHHHHHHHHCC--CCCCCCCCCCCCCCCCCCCCC--------------------CCCCCCCCC-CCCCCCCCHHHH
Q ss_conf ---122687531001--222332222222222223467--------------------643222222-110000000245
Q gi|254780602|r 255 ---LSLIKSMIVLQG--QQTSGACSIAQWAAVEALNGP--------------------QDFVVNNRK-IFEYRRDLCVAQ 308 (400)
Q Consensus 255 ---~~li~~l~~~~~--~~~~~~~~~~q~a~~~~l~~~--------------------~~~~~~~~~-~~~~~r~~~~~~ 308 (400)
..+++.+..... ....|.+.=.|..+..-|-.+ ..++-+... +...++..+++.
T Consensus 77 rvk~p~~~~V~~~A~~G~pVLGiCNGFQIL~E~GLLpGfDeDkPlaekPemAL~~N~~~rFisr~v~LrV~n~~T~FT~~ 156 (264)
T TIGR01737 77 RVKSPIMQEVREFAEKGKPVLGICNGFQILVEAGLLPGFDEDKPLAEKPEMALLPNASLRFISRWVYLRVENADTAFTKK 156 (264)
T ss_pred HCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEEECCCHHHHC
T ss_conf 50308899999999559828997664799999762489887887435712244205889745320368998567836635
Q ss_pred HHCCC--CCEEEECCCCEEE
Q ss_conf 53047--7603302740899
Q gi|254780602|r 309 LQGVP--GIRYMIPDGAFYL 326 (400)
Q Consensus 309 L~~~~--g~~~~~p~g~~y~ 326 (400)
+++=. -+.+-+-||-||+
T Consensus 157 y~kGev~~~PiAHgEGrYy~ 176 (264)
T TIGR01737 157 YKKGEVIRVPIAHGEGRYYA 176 (264)
T ss_pred CCCCCEEEEEEEECCCCEEC
T ss_conf 79887887654425872662
No 464
>KOG2928 consensus
Probab=21.09 E-value=36 Score=15.01 Aligned_cols=53 Identities=17% Similarity=0.358 Sum_probs=35.4
Q ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCCCCCCCCC
Q ss_conf 22012113542100001233332111223333320111--01221100000122332
Q gi|254780602|r 165 TKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHII--SDDIYEHIVYRNCQFSN 219 (400)
Q Consensus 165 ~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii--~De~Y~~l~~~~~~~~s 219 (400)
.++++++ ||=-|-.+-.+..++++..++.-++|.|| .|-+|..|.+|.....+
T Consensus 327 ~kl~LvV--hNiDg~~Lr~~~~Q~~L~~Lss~~nI~liASvDHInapllWD~~~~ss 381 (518)
T KOG2928 327 QKLILVV--HNIDGPMLRDEKFQAILARLSSIDNIALIASVDHINAPLLWDDVKLSS 381 (518)
T ss_pred CEEEEEE--ECCCCHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCEECCHHHHCC
T ss_conf 4189999--626824322617999999863577537998603347621203234234
No 465
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=20.88 E-value=22 Score=16.33 Aligned_cols=31 Identities=19% Similarity=0.279 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
Q ss_conf 23333211122333332011101221100000
Q gi|254780602|r 182 SQNRLRALADVLVRNPHVHIISDDIYEHIVYR 213 (400)
Q Consensus 182 s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~ 213 (400)
++++++++++.| .+.+|-||.|=+|.+|.-+
T Consensus 212 tPedfk~fVD~a-H~~GIgViLD~V~~HF~~d 242 (628)
T COG0296 212 TPEDFKALVDAA-HQAGIGVILDWVPNHFPPD 242 (628)
T ss_pred CHHHHHHHHHHH-HHCCCEEEEEECCCCCCCC
T ss_conf 989999999999-8769989997557768987
No 466
>pfam02662 FlpD Methyl-viologen-reducing hydrogenase, delta subunit. This family consist of methyl-viologen-reducing hydrogenase, delta subunit / heterodisulphide reductase. No specific functions have been assigned to this subunit. The aligned region corresponds to almost the entire delta chain sequence and contains 4 conserved cysteine residues. However, in two Archaeoglobus sequences this region corresponds to only the C-terminus of these proteins.
Probab=20.78 E-value=19 Score=16.71 Aligned_cols=40 Identities=15% Similarity=0.279 Sum_probs=17.3
Q ss_pred CHHHHHHCCCCCCCCCEEE--CCC---CCCCCCCCCCCCCCCCCC
Q ss_conf 1033310001221220121--135---421000012333321112
Q gi|254780602|r 152 VSPEKLEQAITPKTKWLFL--NSP---SNPSGVVYSQNRLRALAD 191 (400)
Q Consensus 152 ~d~~~l~~~i~~~~k~i~l--~nP---~NPTG~v~s~~~l~~i~~ 191 (400)
++++.+.+++......+++ |.| |+.+|..+.++++..+-+
T Consensus 40 v~~~~il~A~~~GADGV~V~GC~~GdChy~~Gn~~a~~Rv~~~~~ 84 (124)
T pfam02662 40 VNPSLILKALEKGADGVLVLGCHPGDCHYLKGNEKARRRVEKVKE 84 (124)
T ss_pred CCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 499999999986999799947888887672646999999999999
No 467
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=20.53 E-value=39 Score=14.77 Aligned_cols=12 Identities=8% Similarity=0.138 Sum_probs=6.4
Q ss_pred CCCCCCCEEECC
Q ss_conf 122122012113
Q gi|254780602|r 161 ITPKTKWLFLNS 172 (400)
Q Consensus 161 i~~~~k~i~l~n 172 (400)
+.++-++.+++|
T Consensus 125 L~~~y~L~iITN 136 (238)
T PRK10748 125 LAKKWPLVAITN 136 (238)
T ss_pred HHHCCEEEEEEC
T ss_conf 973471899957
No 468
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=20.41 E-value=63 Score=13.51 Aligned_cols=83 Identities=12% Similarity=0.196 Sum_probs=38.3
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCC
Q ss_conf 21220121135421000012333321112233333201110122110000012233222111233322574146544322
Q gi|254780602|r 163 PKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYRNCQFSNIVNVEPSLYERTLVVNGVSKAYA 242 (400)
Q Consensus 163 ~~~k~i~l~nP~NPTG~v~s~~~l~~i~~~~a~~~~i~ii~De~Y~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK~~~ 242 (400)
.+...|+|+.|+ -+.++++++++. ++ .-++.++=. .. .|.+-. ... ...+.+=.+..++.
T Consensus 146 ~gi~~I~lvaPt------t~~~rl~~i~~~-a~-GFiY~vs~~---Gv--TG~~~~-~~~---~~~~~v~~vr~~~~--- 205 (265)
T COG0159 146 HGIDPIFLVAPT------TPDERLKKIAEA-AS-GFIYYVSRM---GV--TGARNP-VSA---DVKELVKRVRKYTD--- 205 (265)
T ss_pred CCCCEEEEECCC------CCHHHHHHHHHH-CC-CCEEEEECC---CC--CCCCCC-CCH---HHHHHHHHHHHHCC---
T ss_conf 698679886999------998999999974-79-858999666---66--677765-304---69999999997448---
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 344544422110122687531001
Q gi|254780602|r 243 MTGLRIGYAAGALSLIKSMIVLQG 266 (400)
Q Consensus 243 ~~G~RiG~~v~~~~li~~l~~~~~ 266 (400)
.| .=+||-+.+++-++++....+
T Consensus 206 ~P-v~vGFGIs~~e~~~~v~~~AD 228 (265)
T COG0159 206 VP-VLVGFGISSPEQAAQVAEAAD 228 (265)
T ss_pred CC-EEEECCCCCHHHHHHHHHHCC
T ss_conf 97-387448699999999997688
No 469
>pfam00728 Glyco_hydro_20 Glycosyl hydrolase family 20, catalytic domain. This domain has a TIM barrel fold.
Probab=20.31 E-value=23 Score=16.21 Aligned_cols=25 Identities=8% Similarity=0.025 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHCCCCEEECCCC
Q ss_conf 8999999999999869972665658
Q gi|254780602|r 15 ATLVAAQRVRDLRSKGIDVLCLTAG 39 (400)
Q Consensus 15 ~~~~~~~~~~~~~~~g~~ii~l~~G 39 (400)
+.-.+.+.++.|..-...++++.+-
T Consensus 16 ~~~~lk~~id~ma~~K~N~lhlHlt 40 (335)
T pfam00728 16 SVDTIKRLIDAMAFYKLNVLHWHLT 40 (335)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 9999999999999828967999985
No 470
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=20.07 E-value=20 Score=16.59 Aligned_cols=176 Identities=17% Similarity=0.183 Sum_probs=85.7
Q ss_pred CCCCCCCC---CCC--CCHHHHHHCCCCC-----CCCCEEECCC-CCCCC-CCCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 22222222---322--2103331000122-----1220121135-42100-00123333211122333332011101221
Q gi|254780602|r 140 VFVDTQQD---DNF--QVSPEKLEQAITP-----KTKWLFLNSP-SNPSG-VVYSQNRLRALADVLVRNPHVHIISDDIY 207 (400)
Q Consensus 140 ~~v~~~~~---~~~--~~d~~~l~~~i~~-----~~k~i~l~nP-~NPTG-~v~s~~~l~~i~~~~a~~~~i~ii~De~Y 207 (400)
..|||+|- |.= .--++++|+++.. ||-+-+++=| +-=-| .--|++.+++|-+++ ++||+..|+||+=
T Consensus 221 LkYPLeE~~~~N~~Ee~rCL~~vE~L~~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~-~k~~v~FivDEVQ 299 (469)
T TIGR00699 221 LKYPLEEHVEENAKEEQRCLEEVEDLIKKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDIT-KKHNVAFIVDEVQ 299 (469)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEEEEEEE
T ss_conf 678702325754558889999999999731798615888886243478885343378889999999-8859568996455
Q ss_pred CCCCCCCCCCCCCCCCCCCCC--CEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-CC-CCCCCCCCCCCC
Q ss_conf 100000122332221112333--22574146544322344544422110122687531001222-33-222222222222
Q gi|254780602|r 208 EHIVYRNCQFSNIVNVEPSLY--ERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQT-SG-ACSIAQWAAVEA 283 (400)
Q Consensus 208 ~~l~~~~~~~~s~~~~~~~~~--~~~i~~~S~SK~~~~~G~RiG~~v~~~~li~~l~~~~~~~~-~~-~~~~~q~a~~~~ 283 (400)
-...=.| .+++-+ .+ +.=.=+-||||-+- +| ||--.++++.= =.-+++..+ .| |+.-.+. ...
T Consensus 300 TGvGaTG----klWAHe--~W~L~~P~D~vtFSKK~q-tA---GyFFH~~~lrP-n~pYr~FNTW~GdP~r~l~~--~~i 366 (469)
T TIGR00699 300 TGVGATG----KLWAHE--HWNLDDPPDMVTFSKKFQ-TA---GYFFHDPALRP-NKPYRQFNTWMGDPSRALIL--REI 366 (469)
T ss_pred ECCCCCC----CCCCCC--CCCCCCCCCCEEECHHHH-CC---CCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHH--HHH
T ss_conf 0878863----312300--274111385022045641-27---64236735688-84400035445778899999--988
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHCC----CC-CEEEE--CCCCEEEEEECCC
Q ss_conf 34676432222221100000002455304----77-60330--2740899862641
Q gi|254780602|r 284 LNGPQDFVVNNRKIFEYRRDLCVAQLQGV----PG-IRYMI--PDGAFYLYPSCQD 332 (400)
Q Consensus 284 l~~~~~~~~~~~~~~~~~r~~~~~~L~~~----~g-~~~~~--p~g~~y~~~~~~~ 332 (400)
++.=+ -+++.+...+.-++|+.+|.++ |+ +.-.+ .+|||-.| |+++
T Consensus 367 ~~eI~--~~~L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRGKGrGTFiaw-D~p~ 419 (469)
T TIGR00699 367 IQEIK--RKDLLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRGKGRGTFIAW-DTPD 419 (469)
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEC-CCCC
T ss_conf 87642--25778889987678899899999750134403446764215740-4988
Done!