RPSBLAST alignment for GI: 254780602 and conserved domain: TIGR03539
>gnl|CDD|132578 TIGR03539, DapC_actino, succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Length = 357
Score = 66.3 bits (162), Expect = 1e-11
Identities = 78/303 (25%), Positives = 125/303 (41%), Gaps = 36/303 (11%)
Query: 36 LTAGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKF-RRDNDLHYTSDQI 94
L+ G P +P ++ A+ A + Y G LREAIV+ RR +
Sbjct: 26 LSVGTPVDPVPPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAV 83
Query: 95 IVGTGAKHVIFNALMAT---VNMGDEVLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQ 151
+ G K ++ A + T + GD V+IP + +Y L G PV D
Sbjct: 84 LPVIGTKELV--AWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD-------- 133
Query: 152 VSPEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIV 211
P +L+ ++LNSP NP+G V S + LRA+ R + SD+ Y +
Sbjct: 134 -DPTELDPV---GPDLIWLNSPGNPTGRVLSVDELRAIVA-WARERGAVVASDECYLELG 188
Query: 212 YRNCQFSNIVNV-EPSL----YERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQG 266
+ V++ +P + + L V+ +SK + G R G+ AG +L+ + L
Sbjct: 189 WE----GRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDPALVAEL--LTV 242
Query: 267 QQTSGACSIA--QWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAF 324
++ +G A Q A V AL G V + + RR L+ G R +
Sbjct: 243 RKHAGLMVPAPVQAAMVAAL-GDDGHVAEQKARYAARRAQLKPALE-KAGFRIDHSEAGL 300
Query: 325 YLY 327
YL+
Sbjct: 301 YLW 303