RPSBLAST alignment for GI: 254780602 and conserved domain: TIGR03537
>gnl|CDD|163313 TIGR03537, DapC, succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade. Length = 350
Score = 113 bits (285), Expect = 6e-26
Identities = 100/363 (27%), Positives = 166/363 (45%), Gaps = 26/363 (7%)
Query: 38 AGEPDFDMPENVKYAVVRAMERGETKYTAVAGISPLREAIVEKFRRDNDLHYTSD-QIIV 96
G+P P ++ A++ A+ ++Y + G LREAI F R + D Q++
Sbjct: 7 TGDPKEPTPPFIRKALIDAVPE-VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLP 65
Query: 97 GTGAKHVIFNALMATVNMGDE---VLIPRPYWVSYPDMVALCGGIPVFVDTQQDDNFQVS 153
G+K IF+ + ++ ++ V+ P + Y GG P V +++D F +
Sbjct: 66 SAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLR 125
Query: 154 PEKLEQAITPKTKWLFLNSPSNPSGVVYSQNRLRALADVLVRNPHVHIISDDIYEHIVYR 213
EK+E++I +TK +++N P NP+G ++ L+ + R + + SD+ Y I +
Sbjct: 126 LEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIA-MCREHGIILCSDECYTEIYFG 184
Query: 214 NCQFSNIVNVEPSLYERTLVVNGVSKAYAMTGLRIGYAAGALSLIKSMIVLQGQQTSGAC 273
S + E + E L + +SK MTG R G+ AG LI + L+ +
Sbjct: 185 EPPHSAL---EVGI-ENVLAFHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASP 240
Query: 274 SIAQWAAVEALNGPQDFVVNNRKIFEYRRDLCVAQLQGVPGIRYMIPDGAFYLYPSCQDL 333
Q AA A + + V+ RKIF+ +RDL + V G+ Y+ PD FYL+
Sbjct: 241 DFVQAAAKAAWSD-DNHVLERRKIFKRKRDLFIEFFNKV-GLEYLYPDATFYLW------ 292
Query: 334 IGKKSPSGDVIRTDLDFVNGLLEIEKVAVVQGSSFGHGPS--IRISYAVSDAILEEACVR 391
K PSG D+ LLE + V G +FG G +R++ + EEA
Sbjct: 293 --VKVPSG---IDAKDYALRLLE-NGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRL 346
Query: 392 IKR 394
+R
Sbjct: 347 WER 349