HHsearch alignment for GI: 254780603 and conserved domain: PRK10433
>PRK10433 putative RNA methyltransferase; Provisional.
Probab=99.90 E-value=2e-23 Score=153.57 Aligned_cols=141 Identities=21% Similarity=0.245 Sum_probs=111.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHC
Q ss_conf 688723432068899999998642001100136863200000134443333211012-2232211222222210000000
Q gi|254780603|r 134 LLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYI-RISNLTDALQKMHSWGFQTIGL 212 (282)
Q Consensus 134 ~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~-~~~~~~~~l~~~~~~~~~i~~~ 212 (282)
T Consensus 3 i~iVLvep~~p~NIGa~ARaMkN~G~~~L~LV~P~~-~~~~~a~~~A~gA~diL~~a~v~~sL~eAl~d~~----~vvgt 77 (228)
T PRK10433 3 LTIILVAPARAENIGAAARAMKTMGFSELRIVDSQA-HLEPAARWVAHGSGDILDNIEVFDTLAEALHDVD----FTVAT 77 (228)
T ss_pred EEEEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCC-CCCHHHHHHHCCHHHHHHHCCCCCCHHHHHHCCC----EEEEE
T ss_conf 999996799975199999999728998169979999-9988899983473999973733377999985489----89996
Q ss_pred CCCCCC---C----------CC-CCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 123332---2----------11-223689889997586789877999858939992789687437899999999999987
Q gi|254780603|r 213 SSDSKK---P----------LE-QEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQN 278 (282)
Q Consensus 213 ~~~~~~---~----------~~-~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~ 278 (282)
T Consensus 78 TaR~r~~~~~~~~p~~~~~~~~~~~~~~~~valvFG~E~~GLsneEl~~C~~~~~IPt~~~y~SLNLaqAV~i~~YEl~~ 157 (228)
T PRK10433 78 TARSRAKYHYYATPAELVPLLEEKSSWMSHAALVFGREDSGLTNEELALADVLTGVPMAADYPSLNLGQAVMVYCYQLAG 157 (228)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 45646688886899999999997323478479998886689898999867978985589998532199999999999987
Q ss_pred H
Q ss_conf 6
Q gi|254780603|r 279 H 279 (282)
Q Consensus 279 ~ 279 (282)
T Consensus 158 ~ 158 (228)
T PRK10433 158 L 158 (228)
T ss_pred H
T ss_conf 5