HHsearch alignment for GI: 254780603 and conserved domain: PRK12703

>PRK12703 tRNA 2'-O-methylase; Reviewed.
Probab=95.96  E-value=0.014  Score=34.21  Aligned_cols=124  Identities=15%  Similarity=0.113  Sum_probs=73.9

Q ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCH-HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC--
Q ss_conf             20688999999986420011001368632000-001344433332110122232211222222210000000123332--
Q gi|254780603|r  142 NDPHNIGAILRSAVAFSCDGIITTKRYSPSES-AVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKK--  218 (282)
Q Consensus       142 ~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~-~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--  218 (282)
T Consensus        13 RDkRITTHVaLtARAfGA~~il~~e~D~~v~etv~~V~~rwGG~F~ie-----~~~~w~~~~k~~~G~vVHLTMYG~~i~   87 (339)
T PRK12703         13 RDKRITTHVALTARAFGASSILVDERDETLENTIKKVVDNFGGSFEIK-----TGIEWKSEFKKFHGIRVHLTMYGRPIE   87 (339)
T ss_pred             CCCCHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEE-----ECCCHHHHHHHCCCEEEEEECCCCCHH
T ss_conf             676212589899987168754436887678999999997349977997-----176799998735987999831688657


Q ss_pred             -CCCCCCC-CCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             -2112236-898899975867898779998589399927896874378999999999999
Q gi|254780603|r  219 -PLEQEIK-NDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYIT  276 (282)
Q Consensus       219 -~~~~~~~-~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~  276 (282)
T Consensus        88 dvi~~Ir~~~k~ilVVVGaeK--VP~evYelADyNVaVgNQPHSE----VAALAIFLDRl  141 (339)
T PRK12703         88 DVIDEIRESGKDVMVLVGSEK--VPIEAYEIADYNVSVTNQPISE----VSALAIFLDRY  141 (339)
T ss_pred             HHHHHHHHCCCCEEEEECCCC--CCHHHHHHCCCCEEECCCCHHH----HHHHHHHHHHH
T ss_conf             877776512897799975885--9989985356534327988089----99999999986