HHsearch alignment for GI: 254780603 and conserved domain: TIGR00050
>TIGR00050 rRNA_methyl_1 RNA methyltransferase, TrmH family, group 1; InterPro: IPR004384 These proteins are part of the trmH (spoU) family of rRNA methylases. The spoU gene of Escherichia coli codes for a protein that shows strong similarities to previously characterised 2'-O-methyltransferases . TrmH is a tRNA (guanosine-2'-O-)-methyltransferase (2.1.1.34 from EC), which specifically methylates guanosine-18 in various tRNAs using S-adenosyl-L-methionine.; GO: 0008173 RNA methyltransferase activity.
Probab=99.90 E-value=1.8e-23 Score=153.93 Aligned_cols=145 Identities=21% Similarity=0.271 Sum_probs=121.0
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 06887234320688999999986420011001368632000001344433332110-12223221122222221000000
Q gi|254780603|r 133 QLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIP-YIRISNLTDALQKMHSWGFQTIG 211 (282)
Q Consensus 133 ~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~-~~~~~~~~~~l~~~~~~~~~i~~ 211 (282)
T Consensus 4 ~I~ivLVep~~~gNvG~~ARaMKnmGl~~L~Lv~p~~~~~~~eay~~A~~A~Di~~nA~vv~~L~Eal~sld~~--~~vg 81 (253)
T TIGR00050 4 NISIVLVEPKHSGNVGSIARAMKNMGLEELILVNPRVDILEEEAYALAAHAKDILENAKVVDDLDEALDSLDCD--LVVG 81 (253)
T ss_pred EEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCEEECCHHHHHHHCCCC--EEEE
T ss_conf 24788861799864469999987627001256466225568789998720278658754742679998731997--0786
Q ss_pred CC-CCCC--CCC------------CCCCCCC--CEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 01-2333--221------------1223689--88999758678987799985893999278968743789999999999
Q gi|254780603|r 212 LS-SDSK--KPL------------EQEIKND--KIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALY 274 (282)
Q Consensus 212 ~~-~~~~--~~~------------~~~~~~~--~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~ 274 (282)
T Consensus 82 TsGaRGGd~r~l~~~~~~P~el~~~~~~~~g~~~~A~vFGREd~GL~NEEL~~Ch~~v~iP~~~~YPslNL~~AV~Vi~Y 161 (253)
T TIGR00050 82 TSGARGGDSRNLQRPLLTPRELADKILAKKGWMKVAIVFGREDSGLTNEELEKCHVLVSIPTSEEYPSLNLSHAVAVILY 161 (253)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 26788875434467777836668764242067214788524688876688964781552257788741148999999999
Q ss_pred HHHHH
Q ss_conf 99876
Q gi|254780603|r 275 ITQNH 279 (282)
Q Consensus 275 ~~~~~ 279 (282)
T Consensus 162 eL~~~ 166 (253)
T TIGR00050 162 ELRMA 166 (253)
T ss_pred HHHHH
T ss_conf 99988