HHsearch alignment for GI: 254780603 and conserved domain: pfam09936
>pfam09936 DUF2168 Uncharacterized protein conserved in bacteria (DUF2168). This domain, found in various hypothetical prokaryotic proteins, has no known function. It is also found in a few prokaryotic tRNA (guanine-N(1)-)-methyltransferases.
Probab=97.78 E-value=5.1e-05 Score=48.15 Aligned_cols=124 Identities=22% Similarity=0.278 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCC------------------CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC---
Q ss_conf 899999998642001100136863------------------20000013444333321101222322112222222---
Q gi|254780603|r 146 NIGAILRSAVAFSCDGIITTKRYS------------------PSESAVLAKSASGALEHIPYIRISNLTDALQKMHS--- 204 (282)
Q Consensus 146 NlG~I~Rta~a~g~~~vil~~~~~------------------~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~--- 204 (282)
T Consensus 29 DiHDIAR~~rTYgv~~yyiVtPl~~Q~~l~~ril~hW~~G~G~~~NP~--R~e--Al~~v~~--~~sle~ai~~i~~~~G 102 (185)
T pfam09936 29 DIHDIARSARTYGVGRYYIVTPLEAQQALVERILAHWQEGYGGEYNPD--RKE--ALSLVKV--VSSLEEAIEDIEKRTG 102 (185)
T ss_pred CHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC--HHH--HHHHHHH--HCCHHHHHHHHHHHHC
T ss_conf 477754555004776679956019999999999987325978666967--899--9857300--6029999999999619
Q ss_pred CCCHHHHCCCC-C--CCCCCC---C--CCCCCEEEEECCCCCCCCHHHHHHCCCEEE-ECCCCCCCHHHHHHHHHHHHHH
Q ss_conf 10000000123-3--322112---2--368988999758678987799985893999-2789687437899999999999
Q gi|254780603|r 205 WGFQTIGLSSD-S--KKPLEQ---E--IKNDKIALILGAEGKGLRPKTQETATSMAH-LHMPGIIKALNVSNAAAVALYI 275 (282)
Q Consensus 205 ~~~~i~~~~~~-~--~~~~~~---~--~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~-Ip~~~~~~SLNvs~a~ai~l~~ 275 (282)
T Consensus 103 ~~p~vvaTsAr~~~~~is~~~lr~~i~~~~~P~LllFGT-GwGL~~e~~~~~D~iLePI~g~~~yNHLSVRsAaAIilDR 181 (185)
T pfam09936 103 QRPLIVATSARKRPNTISYEELRKMIQEREKPVLLLFGT-GWGLAPEVLEQADYVLEPIRGAGDYNHLSVRSAAAIILDR 181 (185)
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECC-CCCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 997799804756899739999999984458818999658-7687799997468667056369997620499999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780603|r 276 T 276 (282)
Q Consensus 276 ~ 276 (282)
T Consensus 182 L 182 (185)
T pfam09936 182 L 182 (185)
T ss_pred H
T ss_conf 7