HHsearch alignment for GI: 254780603 and conserved domain: pfam09936

>pfam09936 DUF2168 Uncharacterized protein conserved in bacteria (DUF2168). This domain, found in various hypothetical prokaryotic proteins, has no known function. It is also found in a few prokaryotic tRNA (guanine-N(1)-)-methyltransferases.
Probab=97.78  E-value=5.1e-05  Score=48.15  Aligned_cols=124  Identities=22%  Similarity=0.278  Sum_probs=77.4

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCCC------------------CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC---
Q ss_conf             899999998642001100136863------------------20000013444333321101222322112222222---
Q gi|254780603|r  146 NIGAILRSAVAFSCDGIITTKRYS------------------PSESAVLAKSASGALEHIPYIRISNLTDALQKMHS---  204 (282)
Q Consensus       146 NlG~I~Rta~a~g~~~vil~~~~~------------------~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~---  204 (282)
T Consensus        29 DiHDIAR~~rTYgv~~yyiVtPl~~Q~~l~~ril~hW~~G~G~~~NP~--R~e--Al~~v~~--~~sle~ai~~i~~~~G  102 (185)
T pfam09936        29 DIHDIARSARTYGVGRYYIVTPLEAQQALVERILAHWQEGYGGEYNPD--RKE--ALSLVKV--VSSLEEAIEDIEKRTG  102 (185)
T ss_pred             CHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCC--HHH--HHHHHHH--HCCHHHHHHHHHHHHC
T ss_conf             477754555004776679956019999999999987325978666967--899--9857300--6029999999999619


Q ss_pred             CCCHHHHCCCC-C--CCCCCC---C--CCCCCEEEEECCCCCCCCHHHHHHCCCEEE-ECCCCCCCHHHHHHHHHHHHHH
Q ss_conf             10000000123-3--322112---2--368988999758678987799985893999-2789687437899999999999
Q gi|254780603|r  205 WGFQTIGLSSD-S--KKPLEQ---E--IKNDKIALILGAEGKGLRPKTQETATSMAH-LHMPGIIKALNVSNAAAVALYI  275 (282)
Q Consensus       205 ~~~~i~~~~~~-~--~~~~~~---~--~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~-Ip~~~~~~SLNvs~a~ai~l~~  275 (282)
T Consensus       103 ~~p~vvaTsAr~~~~~is~~~lr~~i~~~~~P~LllFGT-GwGL~~e~~~~~D~iLePI~g~~~yNHLSVRsAaAIilDR  181 (185)
T pfam09936       103 QRPLIVATSARKRPNTISYEELRKMIQEREKPVLLLFGT-GWGLAPEVLEQADYVLEPIRGAGDYNHLSVRSAAAIILDR  181 (185)
T ss_pred             CCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEECC-CCCCCHHHHHHCCEEECCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             997799804756899739999999984458818999658-7687799997468667056369997620499999999998


Q ss_pred             H
Q ss_conf             9
Q gi|254780603|r  276 T  276 (282)
Q Consensus       276 ~  276 (282)
T Consensus       182 L  182 (185)
T pfam09936       182 L  182 (185)
T ss_pred             H
T ss_conf             7