HHsearch alignment of GI: 254780603 and MMDB domain: 1vhy_A_78-257
>1vhy_A (A:78-257) Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae}
Probab=93.11 E-value=0.19 Score=27.38 Aligned_cols=139 Identities=14% Similarity=0.179 Sum_probs=73.9
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCHH-----H---HHHHHHHHH-----HHHCCC-CCCCCCCC
Q ss_conf 8872343206889999999864200110--013686320000-----0---134443333-----211012-22322112
Q gi|254780603|r 135 LMVLDHVNDPHNIGAILRSAVAFSCDGI--ITTKRYSPSESA-----V---LAKSASGAL-----EHIPYI-RISNLTDA 198 (282)
Q Consensus 135 ~i~ld~i~dp~NlG~I~Rta~a~g~~~v--il~~~~~~~~~~-----~---~~ras~Ga~-----~~l~~~-~~~~~~~~ 198 (282)
+.++-.+-.|..+--|++-|.-+|++.+ +.++++...|.. + .-|...-|. .++|-. ...++.++
T Consensus 5 i~l~~a~~K~~~~~~il~k~tELGv~~i~p~~s~rs~~~~~~~~~~~k~eR~~~i~~eA~kQs~r~~lp~i~~~~~l~~~ 84 (180)
T 1vhy_A 5 IHLGQVISRGERXEFTIQKSVELGVNVITPLWSERCGVKLDAERXDKKIQQWQKIAIAACEQCGRNIVPEIRPLXKLQDW 84 (180)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEEEEECTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCSSCCEECCCEEHHHH
T ss_pred EEEEEEECCCCCHHHHHHHHHHEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 77776520655199999875243101589998501504353557777588999999999986078644420211001455
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCC--CCCCCEEEEECCCCCCCCHHHHHHCC--CEEEECCCCCCCHHH--HHHHHHHH
Q ss_conf 2222221000000012333221122--36898899975867898779998589--399927896874378--99999999
Q gi|254780603|r 199 LQKMHSWGFQTIGLSSDSKKPLEQE--IKNDKIALILGAEGKGLRPKTQETAT--SMAHLHMPGIIKALN--VSNAAAVA 272 (282)
Q Consensus 199 l~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~lv~G~E~~Gl~~~~~~~~d--~~v~Ip~~~~~~SLN--vs~a~ai~ 272 (282)
+...... ..+.++..+.....+. ...+++.+++|.|| |.+++-++..- ....+.+...+=--- +-+|.+++
T Consensus 85 l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~i~IGPEG-Gfs~~E~~~~~~~g~~~vsLG~~ILR~ETA~i~als~~ 161 (180)
T 1vhy_A 85 CAENDGA--LKLNLHPRAHYSIKTLPTIPAGGVRLLIGSEG-GLSAQEIAQTEQQGFTEILLGKRVLRTETASLAAISAL 161 (180)
T ss_dssp HTCCSSC--EEEEECTTCCCBGGGCCCCCTTCEEEEECCTT-CCCHHHHHHHHHTTCEEEBCCSSCCCHHHHHHHHHHHH
T ss_pred HHCCCCC--HHHHCCCCCCHHHHHHHCCCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 5303330--01000210002244431156674589984777-88989999999879888666898066787999999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780603|r 273 LYIT 276 (282)
Q Consensus 273 l~~~ 276 (282)
.|.+
T Consensus 162 ~~~~ 165 (180)
T 1vhy_A 162 QICF 165 (180)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9984