HHsearch alignment of GI: 254780603 and MMDB domain: 1zjr_A_24-180
>1zjr_A (A:24-180) TRNA (guanosine-2'-O-)-methyltransferase; methylase, RNA modifying enzyme, topological knot; 1.85A {Aquifex aeolicus}
Probab=100.00 E-value=1.8e-42 Score=262.33 Aligned_cols=148 Identities=22% Similarity=0.297 Sum_probs=140.6
Q ss_pred CEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
Q ss_conf 06887234320688999999986420011001368632000001344433332110122232211222222210000000
Q gi|254780603|r 133 QLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGL 212 (282)
Q Consensus 133 ~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~ 212 (282)
+++++||+++||+|+|+|+|||++||+++|++.+. .+++++++.|+|+|+.+++++..+.++.+++..+++.|++++++
T Consensus 2 ~~~ivl~~~~~p~NiG~i~Rta~afG~~~i~~~~~-~~~~~~~~~~~a~g~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~ 80 (157)
T 1zjr_A 2 DLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHA-EGKKAKINEGITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVAT 80 (157)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHTEEEEEEECS-STTCCCCCHHHHTTGGGSSEEEECSCHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECC-CCCCCHHHHHHHCCCCCCCCEEEEEECHHHCCCCCCCCEEEEEC
T ss_conf 98999958988167899999998659978998589-98850667987433443464689841033201212221012210
Q ss_pred CCC-CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 123-332211223689889997586789877999858939992789687437899999999999987614
Q gi|254780603|r 213 SSD-SKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 213 ~~~-~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
+.+ +..++.++.++++.+||||+|++|||+++++.||.+|+|||.+.++|||||+|+||+|||+.||+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~lvlG~E~~Gls~~~~~~~d~~v~IP~~g~~~SLNva~A~aIvl~e~~rq~~ 150 (157)
T 1zjr_A 81 WLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQRE 150 (157)
T ss_dssp BCSTTSEEGGGSCTTSSEEEEEECBTTBSCHHHHTTCSEEEECCCCSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
T ss_conf 1233322220135776259996684343789999558869998899999746699999999999998687