HHsearch alignment of GI: 254780603 and MMDB domain: 2i6d_A_99-257
>2i6d_A (A:99-257) RNA methyltransferase, TRMH family; stuctural genomics, knot, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.85A {Porphyromonas gingivalis W83}
Probab=100.00 E-value=1.3e-42 Score=263.16 Aligned_cols=149 Identities=25% Similarity=0.323 Sum_probs=141.2
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 65068872343206889999999864200110013686320000013444333321101222322112222222100000
Q gi|254780603|r 131 NSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTI 210 (282)
Q Consensus 131 ~~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~ 210 (282)
..+++++||+++||+|+|+|+|||++||++++++.+.+++++++++.|+|+|+++++|+.+++++.++++.+++.|++++
T Consensus 3 ~~~~~vvl~~~~~~~NiG~i~Rt~~a~G~~~i~l~~~~~~~~~~~~~r~a~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 82 (159)
T 2i6d_A 3 VEGLTLLLDGVQDPGNVGTILRTADWFGIRHVWLGTGSADVFSPKVVQASXGALARVQPTPLKNTVDTLAYFRRQGIPVY 82 (159)
T ss_dssp CCSEEEEEESCCCHHHHHHHHHHHHHHTCCEEEECTTCCCTTSHHHHHTSTTGGGTCEEEECSCHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf 67769998500355559999844650111157774023333443555421111101022233321002234311575432
Q ss_pred HCCCCCC--CCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECC-----CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 0012333--221122368988999758678987799985893999278-----96874378999999999999876
Q gi|254780603|r 211 GLSSDSK--KPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHM-----PGIIKALNVSNAAAVALYITQNH 279 (282)
Q Consensus 211 ~~~~~~~--~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~-----~~~~~SLNvs~a~ai~l~~~~~~ 279 (282)
+++.++. ..+.+..++++.+||||+|+.||++++++.||.+|+||| .+.++|||||+|++|+|||++||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~l~~~d~~v~IP~~~~~m~g~~~SLNva~A~~I~lye~~rq 158 (159)
T 2i6d_A 83 GAFLDGQSLYEAPLPNFTEPAILVLGSEGRGISPEVAAEITDRLTIPASGLSVKGHTESLNVAIATAILCSEWRRR 158 (159)
T ss_dssp EEEEEEEETTTSCCCCTTSCEEEEEEBTTTBSCHHHHTTCSEEEECCCCSSCC----CCCCHHHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHC
T ss_conf 2223454210022205776369998156667899999858978998988778899987213999999999999847