HHsearch alignment of GI: 254780603 and MMDB domain: 3gyq_A_1-112

>3gyq_A (A:1-112) RRNA (adenosine-2'-O-)-methyltransferase; rRNA methyltransferase, spout mtases, SAM, trefoil knot, antibiotic resistance; HET: SAM; 2.45A {Streptomyces cyaneus}
Probab=99.39  E-value=3.9e-12  Score=88.59  Aligned_cols=97  Identities=6%  Similarity=0.072  Sum_probs=75.5

Q ss_pred             CCCCHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEEECCCCCCCCC-HHHHHHCCCCEEEECHHHHH
Q ss_conf             22376567776543112211128819998578899999789818999997378433543-45543269969997689987
Q gi|254780603|r   24 RRNHRDYKKMQSFNQKSRHTSQPENLFLYGVHTVSAALNNPSRKIFQLLATKNALARLD-WDANLPHPFPVKTVPPQTID  102 (282)
Q Consensus        24 ~~~n~~~k~~~~l~~k~k~R~~~~~~iIeG~~~V~eaL~~~~~~i~~i~~te~~~~~~~-~~~~l~~~~~I~~v~~~~l~  102 (282)
                      +++|+.+|++.+|+  +++|++.|.|++||.|+|.|||+++. .+..+|+++....... ........++++.++.+.|+
T Consensus        12 S~~n~~vk~~~~L~--~k~R~~~g~fl~EG~~~v~eal~~g~-~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~vs~~~~~   88 (112)
T 3gyq_A           12 NPSDPAVQRIIDVT--KPSRSNIKTTLIEDVEPLMHSIAAGV-EFIEVYGSDSSPFPSELLDLCGRQNIPVRLIDSSIVN   88 (112)
T ss_dssp             CCCSSTTGGGHHHH--SSSCSCCSEEEECSHHHHHHHHTTTC-EEEEEEEESSSCCCTTTTHHHHTTTCCEEEECHHHHT
T ss_pred             CCCCHHHHHHHHHH--HCCHHHCCEEEEEEHHHHHHHHHCCC-CEEEEEEECCCCCHHHHHHHHHCCCEEEEEECHHHHH
T ss_conf             99988999999750--42431359799985899999997799-8389999688642799999975286359997999999


Q ss_pred             HHHCCCCCCCCCCEEEECCCCC
Q ss_conf             7524777777442024115555
Q gi|254780603|r  103 KIVGKEAVHQGLALETAPLLSP  124 (282)
Q Consensus       103 ~i~~~~~~hqGi~a~~~~~~~~  124 (282)
                      +++++. +|||+++.+.....+
T Consensus        89 ~is~~~-~~qGi~av~~~p~~~  109 (112)
T 3gyq_A           89 QLFKGE-RKAKTFGIARVPRPA  109 (112)
T ss_dssp             TTCCSC-SCCCEEEEEECCCCC
T ss_pred             HHHCCC-CCCEEEEEEECCCCC
T ss_conf             971899-864047876415642