HHsearch results for GI: 254780603 and protein with PDBid: 1v2x_A
>1v2x_A TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus} SCOP: c.116.1.1
Probab=100.00 E-value=3.1e-43 Score=265.89 Aligned_cols=150 Identities=23% Similarity=0.341 Sum_probs=138.0
Q ss_pred CCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHH
Q ss_conf 66506887234320688999999986420011001368632000001344433332110122232211222222210000
Q gi|254780603|r 130 RNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQT 209 (282)
Q Consensus 130 ~~~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i 209 (282)
+.++++|+||+|+||+|+|+|+|||+|||++.+++...++++++ ..++++|+.+++++..+.+..++++.+++.|+++
T Consensus 19 ~~~~~~vvld~v~~p~NlGaIiRta~afG~~~i~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~~~i 96 (194)
T 1v2x_A 19 RQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAVNPTGGVPT--FNETSGGSHKWVYLRVHPDLHEAFRFLKERGFTV 96 (194)
T ss_dssp CBTTEEEEEESCCCHHHHHHHHHHHHHHTBSEEEEESGGGGSCC--CCSSCSSGGGTSEEEEESSHHHHHHHHHHTTCEE
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCCH--HHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCEE
T ss_conf 89998999967988465999999999749964303588667713--4431034431246999558999999999759825
Q ss_pred HHCCCC-CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 000123-332211223689889997586789877999858939992789687437899999999999987614
Q gi|254780603|r 210 IGLSSD-SKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 210 ~~~~~~-~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
++++.. +..++.+++++.+.+||||+|++|||+++++.||.+|+|||.+.++|||||+|+||+|||..||+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~lVfG~E~~Gls~e~l~~~d~~v~IPm~~~~~SLNvs~A~aI~lyE~~Rq~~ 169 (194)
T 1v2x_A 97 YATALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRL 169 (194)
T ss_dssp EEECCCTTSEEGGGSCTTSSEEEEECBTTTBSCHHHHHHSSEEEECCCCSSCSCCCHHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCCCCCHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH
T ss_conf 4201222245401102688828997676788999999858979995899998632699999999999999776