HHsearch results for GI: 254780603 and protein with PDBid: 1vhy_A
>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=93.19 E-value=0.13 Score=27.34 Aligned_cols=137 Identities=13% Similarity=0.197 Sum_probs=69.5
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCHHH------------HHHHHHHH-HHHHCCC-CCCCCCCC
Q ss_conf 8872343206889999999864200110--0136863200000------------13444333-3211012-22322112
Q gi|254780603|r 135 LMVLDHVNDPHNIGAILRSAVAFSCDGI--ITTKRYSPSESAV------------LAKSASGA-LEHIPYI-RISNLTDA 198 (282)
Q Consensus 135 ~i~ld~i~dp~NlG~I~Rta~a~g~~~v--il~~~~~~~~~~~------------~~ras~Ga-~~~l~~~-~~~~~~~~ 198 (282)
+.++-.+-.|.++-.|++-|.-+|++.+ +.++++...++.. ++.|+.-+ -.++|-. ...++.++
T Consensus 82 i~l~~~l~K~~~~~~il~k~tELGV~~I~p~~s~rs~~~~~~~~~~~k~~r~~~I~~eA~eQsgr~~lP~I~~~~~l~~~ 161 (257)
T 1vhy_A 82 IHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAACEQCGRNIVPEIRPLMKLQDW 161 (257)
T ss_dssp EEEEEEC----CCHHHHHHHHHTTCCEEEEEECTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCSSCCEECCCEEHHHH
T ss_pred EEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf 89998402338899999999974876899997102335465667887699999999999986599767865410038999
Q ss_pred CCCCCCCCCHHHHCCCCCCCCCCCC--CCCCCEEEEECCCCCCCCHHHHHHCC--CEEEECCCCCCCHHHHHH----HHH
Q ss_conf 2222221000000012333221122--36898899975867898779998589--399927896874378999----999
Q gi|254780603|r 199 LQKMHSWGFQTIGLSSDSKKPLEQE--IKNDKIALILGAEGKGLRPKTQETAT--SMAHLHMPGIIKALNVSN----AAA 270 (282)
Q Consensus 199 l~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~lv~G~E~~Gl~~~~~~~~d--~~v~Ip~~~~~~SLNvs~----a~a 270 (282)
+...... ..+.....+...+.+. ...+++.+++|.|| |.+++-++... ....+.+..++ |=+.+ |.|
T Consensus 162 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~E~~~l~~~~~~~vsLG~~I--LR~ETA~i~als 236 (257)
T 1vhy_A 162 CAENDGA--LKLNLHPRAHYSIKTLPTIPAGGVRLLIGSEG-GLSAQEIAQTEQQGFTEILLGKRV--LRTETASLAAIS 236 (257)
T ss_dssp HTCCSSC--EEEEECTTCCCBGGGCCCCCTTCEEEEECCTT-CCCHHHHHHHHHTTCEEEBCCSSC--CCHHHHHHHHHH
T ss_pred HHHCCCC--CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCC--CHHHHHHHHHHH
T ss_conf 8615444--21011024444566665303686589985777-889899999998798783268981--668879999999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780603|r 271 VALYIT 276 (282)
Q Consensus 271 i~l~~~ 276 (282)
+++|..
T Consensus 237 ~~~~~~ 242 (257)
T 1vhy_A 237 ALQICF 242 (257)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999984