HHsearch results for GI: 254780603 and protein with PDBid: 1vhy_A

>1vhy_A Hypothetical protein HI0303; PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Haemophilus influenzae} SCOP: b.122.1.2 c.116.1.5 PDB: 1nxz_A
Probab=93.19  E-value=0.13  Score=27.34  Aligned_cols=137  Identities=13%  Similarity=0.197  Sum_probs=69.5

Q ss_pred             EEEECCCCCHHHHHHHHHHHHHHHCCCC--CCCCCCCCCCHHH------------HHHHHHHH-HHHHCCC-CCCCCCCC
Q ss_conf             8872343206889999999864200110--0136863200000------------13444333-3211012-22322112
Q gi|254780603|r  135 LMVLDHVNDPHNIGAILRSAVAFSCDGI--ITTKRYSPSESAV------------LAKSASGA-LEHIPYI-RISNLTDA  198 (282)
Q Consensus       135 ~i~ld~i~dp~NlG~I~Rta~a~g~~~v--il~~~~~~~~~~~------------~~ras~Ga-~~~l~~~-~~~~~~~~  198 (282)
                      +.++-.+-.|.++-.|++-|.-+|++.+  +.++++...++..            ++.|+.-+ -.++|-. ...++.++
T Consensus        82 i~l~~~l~K~~~~~~il~k~tELGV~~I~p~~s~rs~~~~~~~~~~~k~~r~~~I~~eA~eQsgr~~lP~I~~~~~l~~~  161 (257)
T 1vhy_A           82 IHLGQVISRGERMEFTIQKSVELGVNVITPLWSERCGVKLDAERMDKKIQQWQKIAIAACEQCGRNIVPEIRPLMKLQDW  161 (257)
T ss_dssp             EEEEEEC----CCHHHHHHHHHTTCCEEEEEECTTSSSCCCHHHHHHHHHHHHHHHHHHHHHHCCSSCCEECCCEEHHHH
T ss_pred             EEEEEEECCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
T ss_conf             89998402338899999999974876899997102335465667887699999999999986599767865410038999


Q ss_pred             CCCCCCCCCHHHHCCCCCCCCCCCC--CCCCCEEEEECCCCCCCCHHHHHHCC--CEEEECCCCCCCHHHHHH----HHH
Q ss_conf             2222221000000012333221122--36898899975867898779998589--399927896874378999----999
Q gi|254780603|r  199 LQKMHSWGFQTIGLSSDSKKPLEQE--IKNDKIALILGAEGKGLRPKTQETAT--SMAHLHMPGIIKALNVSN----AAA  270 (282)
Q Consensus       199 l~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~lv~G~E~~Gl~~~~~~~~d--~~v~Ip~~~~~~SLNvs~----a~a  270 (282)
                      +......  ..+.....+...+.+.  ...+++.+++|.|| |.+++-++...  ....+.+..++  |=+.+    |.|
T Consensus       162 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~i~i~IGPEG-Gfs~~E~~~l~~~~~~~vsLG~~I--LR~ETA~i~als  236 (257)
T 1vhy_A          162 CAENDGA--LKLNLHPRAHYSIKTLPTIPAGGVRLLIGSEG-GLSAQEIAQTEQQGFTEILLGKRV--LRTETASLAAIS  236 (257)
T ss_dssp             HTCCSSC--EEEEECTTCCCBGGGCCCCCTTCEEEEECCTT-CCCHHHHHHHHHTTCEEEBCCSSC--CCHHHHHHHHHH
T ss_pred             HHHCCCC--CCHHHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCCHHHHHHHHHCCCEEEECCCCC--CHHHHHHHHHHH
T ss_conf             8615444--21011024444566665303686589985777-889899999998798783268981--668879999999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780603|r  271 VALYIT  276 (282)
Q Consensus       271 i~l~~~  276 (282)
                      +++|..
T Consensus       237 ~~~~~~  242 (257)
T 1vhy_A          237 ALQICF  242 (257)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
T ss_conf             999984