HHsearch results for GI: 254780603 and protein with PDBid: 3e5y_A
>3e5y_A TRMH family RNA methyltransferase; ssgcid, protein knot, decode, structural genomics; 2.40A {Burkholderia pseudomallei 305}
Probab=100.00 E-value=6.9e-39 Score=240.97 Aligned_cols=148 Identities=16% Similarity=0.135 Sum_probs=137.9
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf 68872343206889999999864200110013686320000013444333321101222322112222222100000001
Q gi|254780603|r 134 LLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLS 213 (282)
Q Consensus 134 ~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~ 213 (282)
+-|+|++++||+|+|+|+|||++||++.|++.+.+.++.++++.++++|+++.+++....+....+..++..++++++++
T Consensus 6 ~~ivL~~p~~P~NiGaI~Rta~afGi~~viv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (160)
T 3e5y_A 6 FNVVLVEPEIPPNTGNVIRLCANTGARLHLIEPLGFPLDDAKMRRAGLDYHEYAQMRVHRDWDAFVAAEAPDPARMFAFT 85 (160)
T ss_dssp CEEEEESCCCHHHHHHHHHHHHHHTCEEEEESSCSSCCCHHHHHHTTCCHHHHHTCEEESSHHHHHHHHCCCGGGEEEEC
T ss_pred EEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCEEEEEE
T ss_conf 79999489999839999999998499578526998640268999874162587645663218889988750583699973
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHC--CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 23332211223689889997586789877999858--939992789687437899999999999987614
Q gi|254780603|r 214 SDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETA--TSMAHLHMPGIIKALNVSNAAAVALYITQNHFA 281 (282)
Q Consensus 214 ~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~--d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~ 281 (282)
..+...+++..++.+.+||||+|++|||+++++.| |++|+|||.+.++|||||+|+||+|||+.||.+
T Consensus 86 ~~~~~~~~~~~~~~k~~lv~G~E~~Gls~~~l~~~~~d~~v~IPm~~~~~SLNvsvAaaI~lyE~~Rq~~ 155 (160)
T 3e5y_A 86 TRGSGRFHDRAFEPGDWFVFGAETRGLAPALVDRFAPEQRVRLPMRPGNRSLNLSNTVAVVVFEAWRQAG 155 (160)
T ss_dssp STTCEEGGGSCCCTTCEEEEEBTTTBSCHHHHTTSCGGGEEECCCCSSSCCCCHHHHHHHHHHHHHHHTT
T ss_pred ECCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHEECCCCCCCCCEEEHHHHHHHHHHHHHHCCC
T ss_conf 0123322112456523999804778899899986303232334799998716699999999999997618