HHsearch results for GI: 254780603 and protein with PDBid: 3ic6_A

>3ic6_A Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090}
Probab=100.00  E-value=6.7e-39  Score=241.02  Aligned_cols=151  Identities=19%  Similarity=0.181  Sum_probs=122.1

Q ss_pred             CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-------------------CCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf             50688723432068899999998642001100136863-------------------20000013444333321101222
Q gi|254780603|r  132 SQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYS-------------------PSESAVLAKSASGALEHIPYIRI  192 (282)
Q Consensus       132 ~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~-------------------~~~~~~~~ras~Ga~~~l~~~~~  192 (282)
                      ..+.||||+++||+|+|+|+|||++||++.|++...++                   ++++++++|+|+|+.+.++...+
T Consensus        16 ~~i~vVL~~~~~P~NlGaI~Rt~~~fG~~~l~lv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ga~~~l~~~~~   95 (223)
T 3ic6_A           16 GNIRIILTRTSHPANIGSAARAMKTMGLHRLTIVTPNLMATPMTENPPVFNPDDVQSFALPEESFILASGAADVLHNAEI   95 (223)
T ss_dssp             GGEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHHHGGGHHHHHTCEE
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCEEE
T ss_conf             48699991798877499999999974998799974676664210122223554323567658899986364876282378


Q ss_pred             -CCCCCCCCCCCCCCCHH----------HHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCC
Q ss_conf             -32211222222210000----------0001233322112236898899975867898779998589399927896874
Q gi|254780603|r  193 -SNLTDALQKMHSWGFQT----------IGLSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIK  261 (282)
Q Consensus       193 -~~~~~~l~~~~~~~~~i----------~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~  261 (282)
                       .++.++++.+.......          +.........+.+..++.+.+||||+|++||++++++.||.+++|||.+.++
T Consensus        96 ~~~~~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alvfGnE~~GLs~~~~~~~d~~v~IPm~~~~~  175 (223)
T 3ic6_A           96 VATLDEALADTTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLMTINGNPDYF  175 (223)
T ss_dssp             ESCHHHHHTTEEEEEEECCSCC--CCCCBCHHHHHHHHHHHHHTTCEEEEEECBTTTBCCHHHHHTCSEEECCCCCTTCC
T ss_pred             ECHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCEECCCCCCCC
T ss_conf             61499987531211111111135544201321000145555304777179976666687978988630011115899997


Q ss_pred             HHHHHHHHHHHHHHHHHHHCC
Q ss_conf             378999999999999876149
Q gi|254780603|r  262 ALNVSNAAAVALYITQNHFAK  282 (282)
Q Consensus       262 SLNvs~a~ai~l~~~~~~~~~  282 (282)
                      |||||+|+||+|||++||+.+
T Consensus       176 SLNvS~A~aIvlyE~~rq~~~  196 (223)
T 3ic6_A          176 SLNLAQAVQVVCYEIFSQTDS  196 (223)
T ss_dssp             CCCHHHHHHHHHHHHHHTTTS
T ss_pred             CEEHHHHHHHHHHHHHHHHCC
T ss_conf             327999999999999984268