HHsearch results for GI: 254780603 and protein with PDBid: 3ic6_A
>3ic6_A Putative methylase family protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 2.59A {Neisseria gonorrhoeae fa 1090}
Probab=100.00 E-value=6.7e-39 Score=241.02 Aligned_cols=151 Identities=19% Similarity=0.181 Sum_probs=122.1
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCC-------------------CCCHHHHHHHHHHHHHHHCCCCC
Q ss_conf 50688723432068899999998642001100136863-------------------20000013444333321101222
Q gi|254780603|r 132 SQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYS-------------------PSESAVLAKSASGALEHIPYIRI 192 (282)
Q Consensus 132 ~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~-------------------~~~~~~~~ras~Ga~~~l~~~~~ 192 (282)
..+.||||+++||+|+|+|+|||++||++.|++...++ ++++++++|+|+|+.+.++...+
T Consensus 16 ~~i~vVL~~~~~P~NlGaI~Rt~~~fG~~~l~lv~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ga~~~l~~~~~ 95 (223)
T 3ic6_A 16 GNIRIILTRTSHPANIGSAARAMKTMGLHRLTIVTPNLMATPMTENPPVFNPDDVQSFALPEESFILASGAADVLHNAEI 95 (223)
T ss_dssp GGEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCCCCCBTTBSSCCCCCTTCGGGCCCCHHHHHHHGGGHHHHHTCEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHCCEEE
T ss_conf 48699991798877499999999974998799974676664210122223554323567658899986364876282378
Q ss_pred -CCCCCCCCCCCCCCCHH----------HHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCC
Q ss_conf -32211222222210000----------0001233322112236898899975867898779998589399927896874
Q gi|254780603|r 193 -SNLTDALQKMHSWGFQT----------IGLSSDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIK 261 (282)
Q Consensus 193 -~~~~~~l~~~~~~~~~i----------~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~ 261 (282)
.++.++++.+....... +.........+.+..++.+.+||||+|++||++++++.||.+++|||.+.++
T Consensus 96 ~~~~~ea~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~alvfGnE~~GLs~~~~~~~d~~v~IPm~~~~~ 175 (223)
T 3ic6_A 96 VATLDEALADTTIACALTSRRREITAPLQTPRDLVPELLQAANRGEKVALVFGNETFGLSIEEVRACNRLMTINGNPDYF 175 (223)
T ss_dssp ESCHHHHHTTEEEEEEECCSCC--CCCCBCHHHHHHHHHHHHHTTCEEEEEECBTTTBCCHHHHHTCSEEECCCCCTTCC
T ss_pred ECHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHCEECCCCCCCC
T ss_conf 61499987531211111111135544201321000145555304777179976666687978988630011115899997
Q ss_pred HHHHHHHHHHHHHHHHHHHCC
Q ss_conf 378999999999999876149
Q gi|254780603|r 262 ALNVSNAAAVALYITQNHFAK 282 (282)
Q Consensus 262 SLNvs~a~ai~l~~~~~~~~~ 282 (282)
|||||+|+||+|||++||+.+
T Consensus 176 SLNvS~A~aIvlyE~~rq~~~ 196 (223)
T 3ic6_A 176 SLNLAQAVQVVCYEIFSQTDS 196 (223)
T ss_dssp CCCHHHHHHHHHHHHHHTTTS
T ss_pred CEEHHHHHHHHHHHHHHHHCC
T ss_conf 327999999999999984268