HHsearch results for GI: 254780603 and protein with PDBid: 3kty_A
>3kty_A Probable methyltransferase; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.30A {Bordetella pertussis}
Probab=100.00 E-value=1.1e-38 Score=239.78 Aligned_cols=149 Identities=17% Similarity=0.256 Sum_probs=117.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC--CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-----
Q ss_conf 5068872343206889999999864200110013686320--000013444333321101222322112222222-----
Q gi|254780603|r 132 SQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPS--ESAVLAKSASGALEHIPYIRISNLTDALQKMHS----- 204 (282)
Q Consensus 132 ~~~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~--~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~----- 204 (282)
..+.+|||++|||+|+|+|+|||+|||+++|++.+.++++ +++++.++++|+.+.++.....+..+.+.....
T Consensus 9 ~~i~vVL~~~~~P~NlGaIiRsa~afG~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (173)
T 3kty_A 9 SRVRFIMTQPSHPGNVGSAARAIKTMGFGELVLVAPRFPDMTAQPEAVALASGALDVLERAAVHDTLEEALAPVTLAFAL 88 (173)
T ss_dssp TTEEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCSSTTGGGSHHHHHHHTTCHHHHHTCEEESCHHHHHTTCSEEEEE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCEEEEEEEEECCHHHHHHHHCCCCCCH
T ss_conf 86599992798987499999999982998899989977777887889873387604544421033299998520222100
Q ss_pred ------CCCHHHHCC--CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf ------100000001--233322112236898899975867898779998589399927896874378999999999999
Q gi|254780603|r 205 ------WGFQTIGLS--SDSKKPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYIT 276 (282)
Q Consensus 205 ------~~~~i~~~~--~~~~~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~ 276 (282)
.+.+..... ......+.+..++.+.+||||+|++||++++++.||..|+|||.+.++|||||+|+||+|||+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~G~E~~Gls~~~~~~~d~~v~IPm~~~~~SLNvs~AaaI~lyEl 168 (173)
T 3kty_A 89 TTRVRDLGPPPCDIREAAGLARRHLDDTEAGVVAIVLGTERAGLTNAQIELCHRICHIPANPQYSSLNVAQALQLAAWEL 168 (173)
T ss_dssp ECC-----CCCEEHHHHHHHHHHHHHHSSSCCEEEEECCCC-CCCHHHHHTSSEEEECCCCSTTCCCCHHHHHHHHHHHH
T ss_pred HHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCEEEEECCCCCCCCEEHHHHHHHHHHHH
T ss_conf 00012233432322343322233333214676289977756788989997479799941898998267899999999999
Q ss_pred HHHH
Q ss_conf 8761
Q gi|254780603|r 277 QNHF 280 (282)
Q Consensus 277 ~~~~ 280 (282)
+|++
T Consensus 169 rra~ 172 (173)
T 3kty_A 169 RYAL 172 (173)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9975