HHsearch results for GI: 254780603 and protein with PDBid: 3onp_A

>3onp_A TRNA/RRNA methyltransferase (SPOU); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 1.90A {Rhodobacter sphaeroides}
Probab=100.00  E-value=1.3e-36  Score=227.99  Aligned_cols=148  Identities=14%  Similarity=0.148  Sum_probs=124.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCC
Q ss_conf             68872343206889999999864200110013686320000013444333321101222322112222222100000001
Q gi|254780603|r  134 LLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALEHIPYIRISNLTDALQKMHSWGFQTIGLS  213 (282)
Q Consensus       134 ~~i~ld~i~dp~NlG~I~Rta~a~g~~~vil~~~~~~~~~~~~~ras~Ga~~~l~~~~~~~~~~~l~~~~~~~~~i~~~~  213 (282)
                      .+|||+++++|+|+|+|+|+|++||++.+++.+.+++++++++.++|+|+.+.++.....+..+.+...+...+.+.+..
T Consensus         5 p~iVLv~p~~p~NiGai~R~~~~fG~~~l~lv~p~~~~~~~~~~~~a~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (249)
T 3onp_A            5 PVFILVRPQMGENIGAAARAMLNFGLGRLRIVDPRDGWPNPKAVAMASGAGRLLDHAGLFPTVAEAIRDCDYVFATTARG   84 (249)
T ss_dssp             CEEEEESCCCHHHHHHHHHHHHHTTCCCEEEESCTTCSSCHHHHHHHGGGHHHHHTCEEESSHHHHHTTCSEEEEEESSC
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCCHHEECEEEEECCHHHHHHHHCCHHHHHHHH
T ss_conf             88999389998749999999998289989991898899988999884787322021136445999976300013222231


Q ss_pred             CCCC-----------CCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             2333-----------2211223689889997586789877999858939992789687437899999999999987614
Q gi|254780603|r  214 SDSK-----------KPLEQEIKNDKIALILGAEGKGLRPKTQETATSMAHLHMPGIIKALNVSNAAAVALYITQNHFA  281 (282)
Q Consensus       214 ~~~~-----------~~~~~~~~~~~~~lv~G~E~~Gl~~~~~~~~d~~v~Ip~~~~~~SLNvs~a~ai~l~~~~~~~~  281 (282)
                      ....           ......+++.+++||||+|+.||+++.++.||..++|||.+.++|||||+|++|+|||..||..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~kvalVFG~E~~GLs~e~l~~cd~~v~IP~~~~~~SLNls~AvaIvlyEl~r~~~  163 (249)
T 3onp_A           85 RELTKPVMTPERAMAHGRALTGEGRRVGILFGPERTGLENEDVALANAIVTVPVNPEFFSLNLAQCVLLLAYEWRRQHD  163 (249)
T ss_dssp             CCSSSCEECHHHHHHHHHHHHHTTCCEEEEECCTTTCCCHHHHTTSSEEEECCCCTTCCCCCHHHHHHHHHHHHHHC--
T ss_pred             CCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCCEEEEECCCCCCCCEEHHHHHHHHHHHHHHHHC
T ss_conf             3578641001134677787650477659999478778887887402518983489998861599999999999999841