RPSBLAST alignment for GI: 254780603 and conserved domain: KOG0838
>gnl|CDD|36056 KOG0838, KOG0838, KOG0838, RNA Methylase, SpoU family [RNA processing and modification]. Length = 271
Score = 84.7 bits (209), Expect = 2e-17
Identities = 75/282 (26%), Positives = 113/282 (40%), Gaps = 31/282 (10%)
Query: 6 KKKSEKIFSLKDSHYAKLRRNHRDYKKMQSFNQKSRHTSQPENLFLYGVHTVSAALNNPS 65
+ I + K + K+ + K ++G H+V AAL+N
Sbjct: 2 HRNRSNIVEARRQ--FKGAKALSPEKRQEKSTAKKLLVPNLGGESVFGTHSVLAALSNGK 59
Query: 66 RKIFQLLATKNALARLDWDANLPHPFPVKTVPPQTIDKIVGKEAVHQGLALETAPLLSPT 125
R LL R + L ++ V ++ + H G+ LE +
Sbjct: 60 RDCRGLLLQSATDFRST-EFELVLRRDIEAVSKHDLNSLTDFRP-HNGILLEAS------ 111
Query: 126 LDAVRNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALE 185
L + LD V DP NIGAI+RSA DG++ K S S V++KS++GALE
Sbjct: 112 --------LCVYLDEVTDPQNIGAIIRSAYFLGADGVLLVKGNSSPLSPVVSKSSAGALE 163
Query: 186 HIPYIRISNLTDALQKMHSWGFQTIGLSS-------DSKKPLEQEIKNDKIALILGAEGK 238
+P ++ N + L + G + G S S L+ + +AL+LG EG
Sbjct: 164 VLPIRQVDNPLEFLNVSVAAGIRLHGTCSWAPASKTISAVSLKFIDPEEPVALVLGNEGA 223
Query: 239 GLRPKTQETATSMAHLHMPGIIKA------LNVSNAAAVALY 274
G+RP E + G K LNVS AA + LY
Sbjct: 224 GIRPGVLELCDLRVSIPGNGFEKDNGAVDSLNVSVAAGLLLY 265