RPSBLAST alignment for GI: 254780603 and conserved domain: KOG0838

>gnl|CDD|36056 KOG0838, KOG0838, KOG0838, RNA Methylase, SpoU family [RNA processing and modification]. Length = 271
 Score = 84.7 bits (209), Expect = 2e-17
 Identities = 75/282 (26%), Positives = 113/282 (40%), Gaps = 31/282 (10%)

Query: 6   KKKSEKIFSLKDSHYAKLRRNHRDYKKMQSFNQKSRHTSQPENLFLYGVHTVSAALNNPS 65
            +    I   +     K  +     K+ +    K           ++G H+V AAL+N  
Sbjct: 2   HRNRSNIVEARRQ--FKGAKALSPEKRQEKSTAKKLLVPNLGGESVFGTHSVLAALSNGK 59

Query: 66  RKIFQLLATKNALARLDWDANLPHPFPVKTVPPQTIDKIVGKEAVHQGLALETAPLLSPT 125
           R    LL       R   +  L     ++ V    ++ +      H G+ LE +      
Sbjct: 60  RDCRGLLLQSATDFRST-EFELVLRRDIEAVSKHDLNSLTDFRP-HNGILLEAS------ 111

Query: 126 LDAVRNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGALE 185
                   L + LD V DP NIGAI+RSA     DG++  K  S   S V++KS++GALE
Sbjct: 112 --------LCVYLDEVTDPQNIGAIIRSAYFLGADGVLLVKGNSSPLSPVVSKSSAGALE 163

Query: 186 HIPYIRISNLTDALQKMHSWGFQTIGLSS-------DSKKPLEQEIKNDKIALILGAEGK 238
            +P  ++ N  + L    + G +  G  S        S   L+     + +AL+LG EG 
Sbjct: 164 VLPIRQVDNPLEFLNVSVAAGIRLHGTCSWAPASKTISAVSLKFIDPEEPVALVLGNEGA 223

Query: 239 GLRPKTQETATSMAHLHMPGIIKA------LNVSNAAAVALY 274
           G+RP   E       +   G  K       LNVS AA + LY
Sbjct: 224 GIRPGVLELCDLRVSIPGNGFEKDNGAVDSLNVSVAAGLLLY 265