RPSBLAST alignment of GI: 254780603 and SCOP domain: d1gz0a1

Alignment

 Score =  104 bits (261), Expect = 7e-24
 Identities = 53/151 (35%), Positives = 82/151 (54%)

Query: 124 PTLDAVRNSQLLMVLDHVNDPHNIGAILRSAVAFSCDGIITTKRYSPSESAVLAKSASGA 183
           P L A  +   L++LD V DPHN+GA LRSA A     +I  K  S   +A   K A GA
Sbjct: 9   PDLIASLDQPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGA 68

Query: 184 LEHIPYIRISNLTDALQKMHSWGFQTIGLSSDSKKPLEQEIKNDKIALILGAEGKGLRPK 243
            E +P IR++NL   ++ +       +G + ++   L Q     ++AL++GAEG+G+R  
Sbjct: 69  AESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRL 128

Query: 244 TQETATSMAHLHMPGIIKALNVSNAAAVALY 274
           T+E    +  + M G + +LNVS A  + L+
Sbjct: 129 TREHCDELISIPMAGSVSSLNVSVATGICLF 159

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: alpha/beta knot
superfamily: alpha/beta knot
family: SpoU-like RNA 2'-O ribose methyltransferase
domain: RlmB, C-terminal domain
species: Escherichia coli [TaxId: 562]