HHsearch alignment for GI: 254780604 and conserved domain: COG0076
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism].
Probab=99.44 E-value=3e-11 Score=92.27 Aligned_cols=289 Identities=16% Similarity=0.101 Sum_probs=169.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCC-CC--EEEEECCCCCHHHHHCCCCC----------
Q ss_conf 889999999999982987764100027640289999988873499-73--37740565201222023467----------
Q gi|254780604|r 61 HPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHGK-KA--ALIFNSGYIANWATIGTLCS---------- 127 (401)
Q Consensus 61 ~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g~-e~--al~~~SG~~An~~~i~~l~~---------- 127 (401)
T Consensus 75 ~~~a~~~~~~~~~~nl~d~~~~p---~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~ 151 (460)
T COG0076 75 PPVAAELLVSALNKNLGDPDESP---AAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAES 151 (460)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 79999999998734799812383---158889999999999957997660679617079999999999999876644202
Q ss_pred ---CCCCEEEEHHHHHHHHHHHHHHHCCCCEEE---EC-C--CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHH
Q ss_conf ---788723421321116752014531651353---16-7--99889888674066335623621674356773368999
Q gi|254780604|r 128 ---QIDNIICFSDSHNHASIIEGINKARCKKVI---WN-H--NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKE 198 (401)
Q Consensus 128 ---~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~---f~-H--nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~ 198 (401)
T Consensus 152 ~~~~~~P~ii~s-~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g-~vV~~aGtT-~~G~iDdi~~ 228 (460)
T COG0076 152 GKPGGKPNIVCS-ETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG-VVVGTAGTT-DTGSIDDIEE 228 (460)
T ss_pred CCCCCCCEEEEC-CCCCEEHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCC-EEEEECCCC-CCCCCCCHHH
T ss_conf 344688749945-7431209999998188523787524750568999999998746476-499972688-8877788999
Q ss_pred HHHHHHCCCCEEEECCCCCCCCC---CCHHHHHHHHHHCCCCCCHHHCCCCCCCCC---CEEEEECCH-HHHHHHHCCCC
Q ss_conf 99984014718997121100125---602589999972020010110144432222---316875484-45000001332
Q gi|254780604|r 199 ICDLADQYNAITYIDEVHAVGIH---GSCGAGISEREGIMNRITIISGTLAKGFGT---FGGYIAASE-NLCDFIRSFAS 271 (401)
Q Consensus 199 l~~l~~~~~~~LivDEAH~~Gv~---G~~G~G~~~~~g~~~~~di~~~TlsKa~g~---~GG~i~g~~-~~~~~l~~~~~ 271 (401)
T Consensus 229 ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~---~~f~-l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~- 303 (460)
T COG0076 229 LADIAEEYGIWLHVDAAFGGFLLPFLEPDGR---WDFG-LEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFAD- 303 (460)
T ss_pred HHHHHHHCCCCEEEECCCCCHHHHCCCCCCH---HHCC-CCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHCCC-
T ss_conf 9999997699789873440021102474225---3517-8882089988642778888706999968898467761236-
Q ss_pred CCCC-------C--CCCCCHHHHHHHHHHHHHH-C-CHHHHHHHHHHHHHHHHHHHHCC-CCCCC-CCCCEEEEEECCHH
Q ss_conf 2233-------3--4444314788998764320-1-20168888999987666566449-83037-89865999968979
Q gi|254780604|r 272 GFIF-------S--TSLPPAIASASVTSIQYIK-Q-HYDERKKYLERVKQLRHSLENKA-IPCIP-NESHIIPIMVGDSH 338 (401)
Q Consensus 272 ~~if-------s--~~l~p~~~aa~~~al~~l~-~-~~~~~~~l~~~~~~l~~~L~~~g-~~~~~-~~s~Ivpi~~g~~~ 338 (401)
T Consensus 304 ~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~~~ 383 (460)
T COG0076 304 YYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKDDE 383 (460)
T ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCC
T ss_conf 67787786663688505418999999999996788899999999999999999986478827633886507999657643
Q ss_pred H-HHHHHHHHHHHCCEEEEEECCC
Q ss_conf 9-9999999997379099840488
Q gi|254780604|r 339 K-CTQISNILLKEFGIYIQPINYP 361 (401)
Q Consensus 339 ~-~~~~~~~lL~e~Gi~v~~i~~P 361 (401)
T Consensus 384 ~~~~~~~~~-~~~~gw~v~~~~~~ 406 (460)
T COG0076 384 DTLADLSER-LDRRGWQVPAQLLP 406 (460)
T ss_pred CCHHHHHHH-HHHCCCEEECCCCC
T ss_conf 202314789-98629755201377