HHsearch alignment for GI: 254780604 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=99.91 E-value=1.5e-22 Score=164.88 Aligned_cols=331 Identities=21% Similarity=0.286 Sum_probs=224.1
Q ss_pred ECCCCCCCCCCCHHHHHHHHHH-HHHHCCCCCCCHHCCCCC--CHHHHH-HHHHHHHCCCCCEEEE-ECCCCCHHHHHCC
Q ss_conf 1144746677988999999999-998298776410002764--028999-9988873499733774-0565201222023
Q gi|254780604|r 50 WCSNDYLGMGKHPKVIENAQRT-FEKCGIGAGGTRNIAGTN--YYHVML-EKELATLHGKKAALIF-NSGYIANWATIGT 124 (401)
Q Consensus 50 f~sndYLgL~~~p~v~~a~~~a-~~~~G~~~~~sr~~~G~~--~~~~~L-E~~la~~~g~e~al~~-~SG~~An~~~i~~ 124 (401)
T Consensus 32 IASEN~~----S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~A 107 (413)
T COG0112 32 IASENFT----SPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLA 107 (413)
T ss_pred EECCCCC----CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 5125547----899999974577530115899763567872179999999999999848875045888756899999999
Q ss_pred CCCCCCCEEEEHHHHHHHH-HHHH--HHHCCCC--EEEECC------CCHHHHHHHHHHCCCCCCCEEEC-CCCCCCCCC
Q ss_conf 4677887234213211167-5201--4531651--353167------99889888674066335623621-674356773
Q gi|254780604|r 125 LCSQIDNIICFSDSHNHAS-IIEG--INKARCK--KVIWNH------NDLEDLEKNLAATDLSIPKIIIF-ESIYSMDGD 192 (401)
Q Consensus 125 l~~~~d~ii~~~D~~~HaS-i~~g--~~l~~a~--~~~f~H------nD~~~Le~~L~~~~~~~~~iIv~-e~v~Sm~G~ 192 (401)
T Consensus 108 ll~pGD~imgm~--l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~k---PKlii~G~SaY~---r 179 (413)
T COG0112 108 LLQPGDTIMGLD--LSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVK---PKLIIAGGSAYS---R 179 (413)
T ss_pred HCCCCCEEEECC--CCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHC---CCEEEECCCCCC---C
T ss_conf 738988575056--78787655799877664057767624063347517999999999849---978997760355---4
Q ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCC-CCCEEEEECCH-HHHHHHHCCC
Q ss_conf 368999999840147189971211001256025899999720200101101444322-22316875484-4500000133
Q gi|254780604|r 193 IAPIKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGF-GTFGGYIAASE-NLCDFIRSFA 270 (401)
Q Consensus 193 ~apL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~-g~~GG~i~g~~-~~~~~l~~~~ 270 (401)
T Consensus 180 ~id~~~~reIad~VGA~L~~DmAHiaGLV-A~G----~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aV 254 (413)
T COG0112 180 PIDFKRFREIADEVGAYLMVDMAHVAGLI-AGG----VHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAV 254 (413)
T ss_pred CCCHHHHHHHHHHHCCEEEEHHHHHHHHH-HCC----CCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHC
T ss_conf 46789999999871936772177888887-456----6799987552675775347789984179836299998764000
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHCCCCCCC--CCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 222333444431478899876432012-016888899998766656644983037--89865999968979999999999
Q gi|254780604|r 271 SGFIFSTSLPPAIASASVTSIQYIKQH-YDERKKYLERVKQLRHSLENKAIPCIP--NESHIIPIMVGDSHKCTQISNIL 347 (401)
Q Consensus 271 ~~~ifs~~l~p~~~aa~~~al~~l~~~-~~~~~~l~~~~~~l~~~L~~~g~~~~~--~~s~Ivpi~~g~~~~~~~~~~~l 347 (401)
T Consensus 255 FPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~ 334 (413)
T COG0112 255 FPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAA 334 (413)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHHHHH
T ss_conf 77667882788899999999997281389999999999999999999769867158864448999724679877899999
Q ss_pred HHHCCEEEE--EECC-CCCCCCCCEEEEECCC----CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 973790998--4048-8888887218996185----799999999999999999974
Q gi|254780604|r 348 LKEFGIYIQ--PINY-PTVAKKKERLRVTLTP----LHTDSDIEHLVSSLENVWQKM 397 (401)
Q Consensus 348 L~e~Gi~v~--~i~~-PtVp~g~~rlRi~l~a----~ht~edid~~~~~l~~v~~~l 397 (401)
T Consensus 335 L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 335 LERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred HHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 997097652688999998887876634066888635798899999999999999550