HHsearch alignment for GI: 254780604 and conserved domain: COG0160
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism].
Probab=100.00 E-value=2.2e-31 Score=221.80 Aligned_cols=339 Identities=23% Similarity=0.282 Sum_probs=241.1
Q ss_pred CEEEECCCCEEEEEECCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCC---CCEEE
Q ss_conf 102314798689981144-746677-9889999999999982987764100027640289999988873499---73377
Q gi|254780604|r 36 AIHNSDEGSRKVTIWCSN-DYLGMG-KHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHGK---KAALI 110 (401)
Q Consensus 36 ~~~~~~~~~~~~l~f~sn-dYLgL~-~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g~---e~al~ 110 (401)
T Consensus 47 G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h--~~~~~~--~~e~~v~~ae~L~~~~p~~~~~~~~f 122 (447)
T COG0160 47 GAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNH--THTRDL--YYEPYVELAEKLTALAPGSGLKKVFF 122 (447)
T ss_pred CCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHC--CCCCCC--CCHHHHHHHHHHHHHCCCCCCCEEEE
T ss_conf 68899589998988256762010378998999999999997301--357766--63369999999997588656776995
Q ss_pred EECCCCCHHHHHCC---CCCCCCCEEEEHHHHHHHHHHHHHHHCCCCE-------------E--EECC---C--------
Q ss_conf 40565201222023---4677887234213211167520145316513-------------5--3167---9--------
Q gi|254780604|r 111 FNSGYIANWATIGT---LCSQIDNIICFSDSHNHASIIEGINKARCKK-------------V--IWNH---N-------- 161 (401)
Q Consensus 111 ~~SG~~An~~~i~~---l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~-------------~--~f~H---n-------- 161 (401)
T Consensus 123 ~~sGaeA~E~AiKiAr~~Tgr-~~viaf-~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~ 200 (447)
T COG0160 123 GNSGAEAVEAAIKIARAYTGR-PGVIAF-DGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEE 200 (447)
T ss_pred CCCCHHHHHHHHHHHHHHHCC-CCEEEE-CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHH
T ss_conf 688377899999999998589-848997-886556326668754576653357889999858816886556755566355
Q ss_pred ----CHHHHHHHHHHC--CCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH-H
Q ss_conf ----988988867406--6335623621674356773368----9999998401471899712110012560258999-9
Q gi|254780604|r 162 ----DLEDLEKNLAAT--DLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCGAGIS-E 230 (401)
Q Consensus 162 ----D~~~Le~~L~~~--~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~-~ 230 (401)
T Consensus 201 ~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-tG-~GRTG~~fa~E 278 (447)
T COG0160 201 CGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-TG-FGRTGKMFAFE 278 (447)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCCCCCHHHH
T ss_conf 56899999999987404787754699984210789974798999999999999819889995665-58-88662601224
Q ss_pred HHHCCCCCCHHHCCCCCCCCCCE---EEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 97202001011014443222231---687548445000001332223334444314788998764320120168888999
Q gi|254780604|r 231 REGIMNRITIISGTLAKGFGTFG---GYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKKYLER 307 (401)
Q Consensus 231 ~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~ 307 (401)
T Consensus 279 ~~gv~PD--iv--t~aK~ig~-G~Pl~avv~r~ei~~~~~-g--~~~~Tf~GNpva~Aaa~AvL~vie~e-~L~~~a~~~ 349 (447)
T COG0160 279 HFGVEPD--IV--TLAKSLGG-GLPLSAVVGRAEIMDWPP-G--GHGGTFGGNPVACAAALAVLDVIEEE-NLLERAAEL 349 (447)
T ss_pred HCCCCCC--EE--EECCCCCC-CCCEEEEECCHHHCCCCC-C--CCCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHH
T ss_conf 2099987--89--85333457-872067744577601477-6--54777786989999999999999874-299999999
Q ss_pred HHHHHHHHHHC--CCCCC---CCCCCEEEEEE--------CCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEC
Q ss_conf 98766656644--98303---78986599996--------8979999999999973790998404888888872189961
Q gi|254780604|r 308 VKQLRHSLENK--AIPCI---PNESHIIPIMV--------GDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTL 374 (401)
Q Consensus 308 ~~~l~~~L~~~--g~~~~---~~~s~Ivpi~~--------g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l 374 (401)
T Consensus 350 G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~-~~Glil~~~G-----~~~nviRi~P 423 (447)
T COG0160 350 GEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAF-ERGLLLLTCG-----PHGNVLRILP 423 (447)
T ss_pred HHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHH-HCCCEEECCC-----CCCCEEEEEC
T ss_conf 999999999998646744212446507899983378778999999999999999-8698885457-----8786799828
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 85799999999999999999974
Q gi|254780604|r 375 TPLHTDSDIEHLVSSLENVWQKM 397 (401)
Q Consensus 375 ~a~ht~edid~~~~~l~~v~~~l 397 (401)
T Consensus 424 PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 424 PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 95438999999999999999854