HHsearch alignment for GI: 254780604 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=99.29 E-value=1.7e-10 Score=87.45 Aligned_cols=230 Identities=17% Similarity=0.158 Sum_probs=151.3
Q ss_pred CCCC-CCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEE
Q ss_conf 6677-988999999999998298776410002764028999998887349973377405652012220234677887234
Q gi|254780604|r 56 LGMG-KHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDNIIC 134 (401)
Q Consensus 56 LgL~-~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ii~ 134 (401)
T Consensus 34 lG~s~~~~e~iea~~~~~~~~v~L-e~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~E-vVi 111 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAMRAPVEL-ETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKE-VVV 111 (395)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCEE-EEECCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHCCCCE-EEE
T ss_conf 787667989999999985054303-564012313577799999983664403325678828999998763205771-799
Q ss_pred EHHH---HHHHHHHHHHHHCCCCEEEECC---CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCC
Q ss_conf 2132---1116752014531651353167---998898886740663356236216743567733689999998401471
Q gi|254780604|r 135 FSDS---HNHASIIEGINKARCKKVIWNH---NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKEICDLADQYNA 208 (401)
Q Consensus 135 ~~D~---~~HaSi~~g~~l~~a~~~~f~H---nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~ 208 (401)
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~ta~l--lkV~s~~~~f~~~l-~~~~l~~ia~~~~l 188 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENTALL--LKVHSSNYGFTGML-SEEELVEIAHEKGL 188 (395)
T ss_pred ECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCEEE--EEEEECCCCCCCCC-CHHHHHHHHHHCCC
T ss_conf 7131156889986679997197799815657677888998854587058--99950366614645-59999999987699
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCC-CEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Q ss_conf 8997121100125602589999972020010110144432222-316875484450000013322233344443147889
Q gi|254780604|r 209 ITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGFGT-FGGYIAASENLCDFIRSFASGFIFSTSLPPAIASAS 287 (401)
Q Consensus 209 ~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~g~-~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~ 287 (401)
T Consensus 189 pvivD~aSg~~v~~e~--~l~~~--la~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~R--alrv~K~tla~l 262 (395)
T COG1921 189 PVIVDLASGALVDKEP--DLREA--LALGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLKR--ALRVDKETLAAL 262 (395)
T ss_pred CEEEECCCCCCCCCCC--CHHHH--HHCCCCEEEEECCHHCCCCCCCEEECHHHHHHHHHHHHHHH--HHHCCCHHHHHH
T ss_conf 7799667763003554--45688--86079789975401127985433742499999997621334--331582768999
Q ss_pred HHHHHHHHC
Q ss_conf 987643201
Q gi|254780604|r 288 VTSIQYIKQ 296 (401)
Q Consensus 288 ~~al~~l~~ 296 (401)
T Consensus 263 ~~aLe~y~~ 271 (395)
T COG1921 263 EAALELYLQ 271 (395)
T ss_pred HHHHHHHCC
T ss_conf 999998708