HHsearch alignment for GI: 254780604 and conserved domain: PRK03262
>PRK03262 consensus.
Probab=99.91 E-value=4e-21 Score=155.80 Aligned_cols=330 Identities=17% Similarity=0.227 Sum_probs=203.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHHHCCCC
Q ss_conf 9878999999999998399753500134555576310231479868998114474-667798899999999999829877
Q gi|254780604|r 1 MDFEKFFKDQINYLHHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSNDY-LGMGKHPKVIENAQRTFEKCGIGA 79 (401)
Q Consensus 1 m~~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sndY-LgL~~~p~v~~a~~~a~~~~G~~~ 79 (401)
T Consensus 3 ~~~~~l~r~~i~~---------l~pY~~~--~~--------~~~~~~ikL~sNEnP~~~~--~~~~---~~~lnrYP--- 55 (355)
T PRK03262 3 MSITDLARENVRN---------LTPYQSA--RR--------LGGNGDVWLNANEYPTAVE--FQLT---QQTLNRYP--- 55 (355)
T ss_pred CCHHHHHCHHHCC---------CCCCCCC--CC--------CCCCCCEEEECCCCCCCCC--HHHH---HHHHCCCC---
T ss_conf 6889885865267---------8998873--44--------7999988957899999984--8776---78870398---
Q ss_pred CCCHHCCCCCCHHHHHHHHHHHHCCCCC-EEEEECCCCCHH-HHHCCCCCCC-CCEEEEHHHHHHHHHH-HHHHHCCCCE
Q ss_conf 6410002764028999998887349973-377405652012-2202346778-8723421321116752-0145316513
Q gi|254780604|r 80 GGTRNIAGTNYYHVMLEKELATLHGKKA-ALIFNSGYIANW-ATIGTLCSQI-DNIICFSDSHNHASII-EGINKARCKK 155 (401)
Q Consensus 80 ~~sr~~~G~~~~~~~LE~~la~~~g~e~-al~~~SG~~An~-~~i~~l~~~~-d~ii~~~D~~~HaSi~-~g~~l~~a~~ 155 (401)
T Consensus 56 ---------D~~~~~Lr~aiA~~~gv~~~~I~vGnGSdE~I~~i~~~f~~pg~d~vl~~~Pt---F~~Y~~~a~~~g~~~ 123 (355)
T PRK03262 56 ---------ECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPT---YGMYAVSAETIGVEI 123 (355)
T ss_pred ---------CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCC---HHHHHHHHHHCCCEE
T ss_conf ---------99889999999998685855799937899999999999863899779977888---599999999739838
Q ss_pred EEECC-----CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCC--CCEEEECCCCCCCCCCCHHHHH
Q ss_conf 53167-----9988988867406633562362167435677336899999984014--7189971211001256025899
Q gi|254780604|r 156 VIWNH-----NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAPIKEICDLADQY--NAITYIDEVHAVGIHGSCGAGI 228 (401)
Q Consensus 156 ~~f~H-----nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~--~~~LivDEAH~~Gv~G~~G~G~ 228 (401)
T Consensus 124 ~~vp~~~~~~~dl~~~~~~~---~-~-~klv~l~nPNNPTG~~~~~~el~~l~~~~~~~~lvVvDEAY~eF~~~~s~~~- 197 (355)
T PRK03262 124 RTVPTLENWQLDLQAIADNL---D-G-VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAG- 197 (355)
T ss_pred EEEECCCCCCCCHHHHHHHC---C-C-CCEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHHHCCCCCHHH-
T ss_conf 99646556676899999640---4-8-8889976899987644699999999976876728987302554365621556-
Q ss_pred HHHHHCCCCCCHHHCCCCCCCCCCE---EEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH--HHCCHHHHHH
Q ss_conf 9997202001011014443222231---6875484450000013322233344443147889987643--2012016888
Q gi|254780604|r 229 SEREGIMNRITIISGTLAKGFGTFG---GYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQY--IKQHYDERKK 303 (401)
Q Consensus 229 ~~~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~--l~~~~~~~~~ 303 (401)
T Consensus 198 --l~~~~~N-liVlRTfSK~~gLAGlRlGy~ia~~~ii~~l~k~~~p~~----vn~~~~~~a~~al~~~~~~~~~~~i~~ 270 (355)
T PRK03262 198 --WLAEYPN-LVILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYP----LSTPVADIAAQALSPQGIEAMRERVAQ 270 (355)
T ss_pred --HHHCCCC-EEEEECHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCC----CCHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf --7640774-467612677724665350543179999999998438998----779999999999722659999999999
Q ss_pred HHHHHHHHHHHHHHCCC--CCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCH
Q ss_conf 89999876665664498--30378986599996897999999999997379099840-4888888872189961857999
Q gi|254780604|r 304 YLERVKQLRHSLENKAI--PCIPNESHIIPIMVGDSHKCTQISNILLKEFGIYIQPI-NYPTVAKKKERLRVTLTPLHTD 380 (401)
Q Consensus 304 l~~~~~~l~~~L~~~g~--~~~~~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i-~~PtVp~g~~rlRi~l~a~ht~ 380 (401)
T Consensus 271 i~~~R~~l~~~L~~l~~~~~v~pS~aNFvl~~~~~~---~~~~~~L~-~~gIlVR~~~~~~gl~---~~lRisig---t~ 340 (355)
T PRK03262 271 INANRAWLIAALKEIACVEQVFDSETNYILARFTAS---SAVFKSLW-DQGIILRDQNKQPSLS---NCLRITIG---TR 340 (355)
T ss_pred HHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCH---HHHHHHHH-HCCCEEEECCCCCCCC---CEEEEECC---CH
T ss_conf 999999999999848998606899782899978999---99999999-6993896688878999---98999669---99
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780604|r 381 SDIEHLVSSLEN 392 (401)
Q Consensus 381 edid~~~~~l~~ 392 (401)
T Consensus 341 een~~~l~aLka 352 (355)
T PRK03262 341 EECQRVIDALRA 352 (355)
T ss_pred HHHHHHHHHHCC
T ss_conf 999999999713