>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.

Probab=99.66 E-value=1.4e-14 Score=113.63 Aligned_cols=348 Identities=19% Similarity=0.209 Sum_probs=217.1 Q ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCC----------CCHHHHHHHHHH--HHHH Q ss_conf 9999999983997535001345555763102314798689981144746677----------988999999999--9982 Q gi|254780604|r 8 KDQINYLHHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSNDYLGMG----------KHPKVIENAQRT--FEKC 75 (401) Q Consensus 8 ~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sndYLgL~----------~~p~v~~a~~~a--~~~~ 75 (401) T Consensus 27 ~~~L~~~~d~~a~~fl~dYekS~GN-------------Yl~DvDGN~lLDlYsQIsSiPiGYNnP~L~K~a~sPe~a~~L 93 (469) T TIGR00699 27 LKELNEVFDVRAVKFLADYEKSVGN-------------YLVDVDGNVLLDLYSQISSIPIGYNNPALLKAAQSPEMATTL 93 (469) T ss_pred HHHHHHHCCCCHHHHHCCHHHCCCC-------------EEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHH T ss_conf 9861022143222111030111576-------------456314304788887775212246687899865172457886 Q ss_pred CCCCCCCHHCCCCCCHHHHHHHHHHH----HC--CCCCEEEEECCCCCHHHHHCCCC------CCCCCEEEEHHHHHHHH Q ss_conf 98776410002764028999998887----34--99733774056520122202346------77887234213211167 Q gi|254780604|r 76 GIGAGGTRNIAGTNYYHVMLEKELAT----LH--GKKAALIFNSGYIANWATIGTLC------SQIDNIICFSDSHNHAS 143 (401) Q Consensus 76 G~~~~~sr~~~G~~~~~~~LE~~la~----~~--g~e~al~~~SG~~An~~~i~~l~------~~~d~ii~~~D~~~HaS 143 (401) T Consensus 94 -----inRPALGnfp~-~~l~~~~~~g~~k~aPKg~~~v~~~~aG~dane~AfK~af~yYr~~~RGGp~~~Fs~eE~~s~ 167 (469) T TIGR00699 94 -----INRPALGNFPS-KDLAKILKSGILKVAPKGQDSVYRAMAGSDANELAFKAAFMYYRSKQRGGPERDFSEEENESC 167 (469) T ss_pred -----HCCCCCCCCCH-HHHHHHHCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH T ss_conf -----44730146766-799998548812324521030114466642678999999999983589888753117887764 Q ss_pred HHHHHH-------H------------CCCCEEE------------ECC----------------C------CHHHHHHHH Q ss_conf 520145-------3------------1651353------------167----------------9------988988867 Q gi|254780604|r 144 IIEGIN-------K------------ARCKKVI------------WNH----------------N------DLEDLEKNL 170 (401) Q Consensus 144 i~~g~~-------l------------~~a~~~~------------f~H----------------n------D~~~Le~~L 170 (401) T Consensus 168 m~N~~PG~P~~siLSF~~aFHGRlfGsLsTT~SKpiHKlD~PaF~WP~A~FP~LkYPLeE~~~~N~~Ee~rCL~~vE~L~ 247 (469) T TIGR00699 168 MVNQAPGSPDLSILSFKAAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVEENAKEEQRCLEEVEDLI 247 (469) T ss_pred HCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH T ss_conf 31687558507888523431034444200034776031786577746777876678702325754558889999999999 Q ss_pred HHCCCCCCC--EEECCCCCCCCCCH--HH--HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHH-HHHHHHCCCCCCHHHC Q ss_conf 406633562--36216743567733--68--99999984014718997121100125602589-9999720200101101 Q gi|254780604|r 171 AATDLSIPK--IIIFESIYSMDGDI--AP--IKEICDLADQYNAITYIDEVHAVGIHGSCGAG-ISEREGIMNRITIISG 243 (401) Q Consensus 171 ~~~~~~~~~--iIv~e~v~Sm~G~~--ap--L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G-~~~~~g~~~~~di~~~ 243 (401) T Consensus 248 ~~~~~pkrtVaA~IvEPIQSEGGDNHAS~~Ff~KLr~i~~k~~v~FivDEVQ-TGv-GaTGklWAHe~W~L~~P~D~v-- 323 (469) T TIGR00699 248 KKWHKPKRTVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQ-TGV-GATGKLWAHEHWNLDDPPDMV-- 323 (469) T ss_pred HHCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEE-ECC-CCCCCCCCCCCCCCCCCCCCE-- T ss_conf 7317986158888862434788853433788899999998859568996455-087-886331230027411138502-- Q ss_pred CCCCCCCCCEEEEECCHHHHHHHHCCCCCC-CCCCCC-CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC-- Q ss_conf 444322223168754844500000133222-333444-4314788998764320120168888999987666566449-- Q gi|254780604|r 244 TLAKGFGTFGGYIAASENLCDFIRSFASGF-IFSTSL-PPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKA-- 319 (401) Q Consensus 244 TlsKa~g~~GG~i~g~~~~~~~l~~~~~~~-ifs~~l-~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g-- 319 (401) T Consensus 324 tFSKK~q-tAGyFFH~~~lrP---n~--pYr~FNTW~GdP~r~l~~~~i~~eI~~-~~L~~n~~~~Gd~Ly~GLe~L~~~ 396 (469) T TIGR00699 324 TFSKKFQ-TAGYFFHDPALRP---NK--PYRQFNTWMGDPSRALILREIIQEIKR-KDLLNNVAAVGDYLYTGLEDLQKK 396 (469) T ss_pred EECHHHH-CCCCCCCCCCCCC---CC--CCCCCCCCCCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH T ss_conf 2045641-2764236735688---84--400035445778899999988876422-577888998767889989999975 Q ss_pred ----CCCCC--CCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf ----83037--898659999689799999999999737909984048888888721899618579999999999999999 Q gi|254780604|r 320 ----IPCIP--NESHIIPIMVGDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENV 393 (401) Q Consensus 320 ----~~~~~--~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v 393 (401) T Consensus 397 YP~~~~nlRGKGrGTFiawD~p~~a~Rd~l~~~-~r~~Gvn~GGc-------G~~aiRLRP~LvF~~hHA~ilL~~~~~~ 468 (469) T TIGR00699 397 YPEKVQNLRGKGRGTFIAWDTPDEAKRDKLLLK-ARLNGVNIGGC-------GVKAIRLRPMLVFQKHHADILLEAIEKI 468 (469) T ss_pred CCHHHHCCCCCCCCCEEECCCCCHHHHHHHHHH-HCCCCEEECCC-------CCCCEECCCCHHHHHHHHHHHHHHHHHC T ss_conf 013440344676421574049887888999996-22382576265-------3542423753010355689999998630

HHsearch alignment for GI: 254780604 and conserved domain: TIGR00699