HHsearch alignment for GI: 254780604 and conserved domain: TIGR00700

>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=99.88  E-value=7.2e-21  Score=154.16  Aligned_cols=335  Identities=18%  Similarity=0.233  Sum_probs=222.0

Q ss_pred             EEEECCCCEEEEEECCCCCCCCC------CCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC---CCCC
Q ss_conf             02314798689981144746677------98899999999999829877641000276402899999888734---9973
Q gi|254780604|r   37 IHNSDEGSRKVTIWCSNDYLGMG------KHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH---GKKA  107 (401)
Q Consensus        37 ~~~~~~~~~~~l~f~sndYLgL~------~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~---g~e~  107 (401)
T Consensus        25 a~l~DvdGnr~IDfa~----gIavln~GhshP~vV~AV~~Q~~ef-~Ht~f--~v~-pYe~Yv~lAEkln~iaPgSg~kk   96 (427)
T TIGR00700        25 AILKDVDGNRYIDFAA----GIAVLNVGHSHPKVVEAVKRQVEEF-THTAF--QVV-PYESYVELAEKLNAIAPGSGEKK   96 (427)
T ss_pred             CEEEECCCCEEEHHCC----CHHHHCCCCCCHHHHHHHHHHHHHH-CCCCC--EEE-CCHHHHHHHHHHCCCCCCCCCHH
T ss_conf             4787437752100011----0232036898735899999999974-38853--452-16258999999715788973100


Q ss_pred             EEEEECCCCCHHHHHC---CCCCCCCCEEEEHHHHHHHHHHHHHHHC-CC------------CEEE--EC--C-------
Q ss_conf             3774056520122202---3467788723421321116752014531-65------------1353--16--7-------
Q gi|254780604|r  108 ALIFNSGYIANWATIG---TLCSQIDNIICFSDSHNHASIIEGINKA-RC------------KKVI--WN--H-------  160 (401)
Q Consensus       108 al~~~SG~~An~~~i~---~l~~~~d~ii~~~D~~~HaSi~~g~~l~-~a------------~~~~--f~--H-------  160 (401)
T Consensus        97 ~~ffnsGAEAVENAVKIAR~yTgrp-gVvaF-~~gfHGRTnmTMalT~Kv~PYK~GFGPFapevY~aP~py~y~~~~~~~  174 (427)
T TIGR00700        97 AVFFNSGAEAVENAVKIARKYTGRP-GVVAF-DRGFHGRTNMTMALTAKVKPYKIGFGPFAPEVYRAPYPYDYRDIALDK  174 (427)
T ss_pred             EEEECCCHHHHHHHHHHHHHHCCCC-CEEEE-CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf             0211154378888999998745896-16863-687466126788765227873457888674521168872002433442


Q ss_pred             ----CC--HHHHHHHHHHC---CCCCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHH
Q ss_conf             ----99--88988867406---6335623621674356773368----99999984014718997121100125602589
Q gi|254780604|r  161 ----ND--LEDLEKNLAAT---DLSIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCGAG  227 (401)
Q Consensus       161 ----nD--~~~Le~~L~~~---~~~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G  227 (401)
T Consensus       175 q~s~d~m~~~A~~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQ-tG-FARTG~~  252 (427)
T TIGR00700       175 QESLDDMVLAAIEALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQ-TG-FARTGKL  252 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC-CC-CCHHCCC
T ss_conf             222003899999983121033250104378973224788733385889999999754387589972545-68-0000211


Q ss_pred             HH-HHHHCCC-CCCHHHCCCCCCCCC--CEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
Q ss_conf             99-9972020-010110144432222--3168754844500000133222333444431478899876432012016888
Q gi|254780604|r  228 IS-EREGIMN-RITIISGTLAKGFGT--FGGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKK  303 (401)
Q Consensus       228 ~~-~~~g~~~-~~di~~~TlsKa~g~--~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~  303 (401)
T Consensus       253 FA~eH~~~dGl~PDLi--t~aKslA~GlPLSgV~GrAeimdAp--apGgLGGTyaGnPlacAAAlAvl~iIe~e-gL~ER  327 (427)
T TIGR00700       253 FAIEHYDDDGLKPDLI--TVAKSLADGLPLSGVVGRAEIMDAP--APGGLGGTYAGNPLACAAALAVLDIIEEE-GLIER  327 (427)
T ss_pred             EEEEECCCCCCCCCHH--HHHHHHHCCCCCCHHHCCHHHCCCC--CCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CHHHH
T ss_conf             2541006788875188--7866773568621110441211688--88888775568879999999999863113-12478


Q ss_pred             HHHHHHHHHHHHHHCC--CCC---CCCCCCEEEEEE--------CCHHHHHHHHHHHHHHCCEEE-EEECCCCCCCCCCE
Q ss_conf             8999987666566449--830---378986599996--------897999999999997379099-84048888888721
Q gi|254780604|r  304 YLERVKQLRHSLENKA--IPC---IPNESHIIPIMV--------GDSHKCTQISNILLKEFGIYI-QPINYPTVAKKKER  369 (401)
Q Consensus       304 l~~~~~~l~~~L~~~g--~~~---~~~~s~Ivpi~~--------g~~~~~~~~~~~lL~e~Gi~v-~~i~~PtVp~g~~r  369 (401)
T Consensus       328 a~qig~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~-a~GlllLTcG~~-----G-Ni  400 (427)
T TIGR00700       328 AEQIGKLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAAL-AAGLLLLTCGIY-----G-NI  400 (427)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH-HCCHHHHHCCHH-----C-CH
T ss_conf             9998788988888887606721112026335788865488788831799999999997-568221230301-----1-55


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             89961857999999999999999999
Q gi|254780604|r  370 LRVTLTPLHTDSDIEHLVSSLENVWQ  395 (401)
Q Consensus       370 lRi~l~a~ht~edid~~~~~l~~v~~  395 (401)
T Consensus       401 IRfL~PLtI~D~ll~egl~Il~a~L~  426 (427)
T TIGR00700       401 IRFLTPLTISDELLDEGLDILEAALA  426 (427)
T ss_pred             HHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf             54348865467889889999999852