HHsearch alignment for GI: 254780604 and conserved domain: TIGR01328

>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.57  E-value=1.2e-13  Score=107.71  Aligned_cols=296  Identities=18%  Similarity=0.203  Sum_probs=191.5

Q ss_pred             CCCCCHHCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCE-E
Q ss_conf             776410002764028999998887349973377405652012220234677887234213211167520145316513-5
Q gi|254780604|r   78 GAGGTRNIAGTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDNIICFSDSHNHASIIEGINKARCKK-V  156 (401)
Q Consensus        78 ~~~~sr~~~G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~-~  156 (401)
T Consensus        50 Gy~YsRlg--N-PTv~~LE~riA~LEg~EAavAt~SGMgAi~A~l~~~lkAgDh~i~--d~~lYGCTfall~~~ltkfgi  124 (392)
T TIGR01328        50 GYVYSRLG--N-PTVDLLERRIAELEGAEAAVATASGMGAIAATLLSLLKAGDHVIS--DETLYGCTFALLEDALTKFGI  124 (392)
T ss_pred             CEEEECCC--C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE--CCCCCCCHHHHHHHHHHHHCC
T ss_conf             62685267--7-137788889875420467788751289999999999852875774--387420148998732677375


Q ss_pred             EECCCCHHHHHHHHHHCCCCCCCEEECCC-CCCCCCCHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCHHHHHHHHHHC
Q ss_conf             31679988988867406633562362167-4356773368999999840147-189971211001256025899999720
Q gi|254780604|r  157 IWNHNDLEDLEKNLAATDLSIPKIIIFES-IYSMDGDIAPIKEICDLADQYN-AITYIDEVHAVGIHGSCGAGISEREGI  234 (401)
Q Consensus       157 ~f~HnD~~~Le~~L~~~~~~~~~iIv~e~-v~Sm~G~~apL~~l~~l~~~~~-~~LivDEAH~~Gv~G~~G~G~~~~~g~  234 (401)
T Consensus       125 ~v~f~~~~~pee~~a~i~dnT~-ivYfETPaNPt-m~liD~e~v~r~A~~~gG~kVivDNTfatP~l---------t~P~  193 (392)
T TIGR01328       125 DVKFVDMASPEEVKAAIKDNTK-IVYFETPANPT-MKLIDLELVVRVAHEKGGVKVIVDNTFATPYL---------TRPV  193 (392)
T ss_pred             EEEEECCCCHHHHHHHCCCCCE-EEEEECCCCCC-HHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH---------CCHH
T ss_conf             2798317877999984489977-99986599875-25775999999997529828998566277001---------3803


Q ss_pred             CCCCCHHHCCCCCCCCCCE----EEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Q ss_conf             2001011014443222231----687548445000001332223334444314788998764320120168888999987
Q gi|254780604|r  235 MNRITIISGTLAKGFGTFG----GYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKKYLERVKQ  310 (401)
Q Consensus       235 ~~~~di~~~TlsKa~g~~G----G~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~  310 (401)
T Consensus       194 alG~D~VVHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~KD~tG~ViSPfdAwL~lRGLkTL---~~RM~rhsenA~k  270 (392)
T TIGR01328       194 ALGVDVVVHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVKDMTGAVISPFDAWLVLRGLKTL---AVRMKRHSENAEK  270 (392)
T ss_pred             HCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHH---HHHHHHHHHHHHH
T ss_conf             6187768942412137612211221107756674401111000566500557899997436677---7888773053899


Q ss_pred             HHHHHHHC---------CCCCCCCC----------CCEEEEEEC-CHHHHHHHHHHHHHHCCEEEE------EECCC---
Q ss_conf             66656644---------98303789----------865999968-979999999999973790998------40488---
Q gi|254780604|r  311 LRHSLENK---------AIPCIPNE----------SHIIPIMVG-DSHKCTQISNILLKEFGIYIQ------PINYP---  361 (401)
Q Consensus       311 l~~~L~~~---------g~~~~~~~----------s~Ivpi~~g-~~~~~~~~~~~lL~e~Gi~v~------~i~~P---  361 (401)
T Consensus       271 vAe~Lk~HPaVe~V~YPG~~~hp~hdiaakQM~~gGgm~~F~lKgg~a~~~k~~n~L-kLIr~AVSLGdaEtLIQHPAsM  349 (392)
T TIGR01328       271 VAEYLKEHPAVEKVYYPGLEEHPDHDIAAKQMKKGGGMLAFELKGGEADAKKLLNRL-KLIRLAVSLGDAETLIQHPASM  349 (392)
T ss_pred             HHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCC
T ss_conf             999852388602123688778887408999874048727754325668999998755-5766553127742000587646


Q ss_pred             ---CCCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             ---8888--------87218996185799999999999999999974
Q gi|254780604|r  362 ---TVAK--------KKERLRVTLTPLHTDSDIEHLVSSLENVWQKM  397 (401)
Q Consensus       362 ---tVp~--------g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l  397 (401)
T Consensus       350 THavvp~eeR~aaGI~~gm~RlSvG----lEd~~d~~ADl~~aL~~L  392 (392)
T TIGR01328       350 THAVVPKEEREAAGISEGMVRLSVG----LEDVDDVLADLKQALDAL  392 (392)
T ss_pred             CCCCCCHHHHHHCCCCCCCEEEECC----HHHHHHHHHHHHHHHCCC
T ss_conf             6789885678444766461223004----526999999999852149