HHsearch alignment for GI: 254780604 and conserved domain: TIGR01825
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=0 Score=840.30 Aligned_cols=386 Identities=34% Similarity=0.598 Sum_probs=371.1
Q ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCC
Q ss_conf 99999999983997535001345555763102314798689981144746677988999999999998298776410002
Q gi|254780604|r 7 FKDQINYLHHEKRYRFFTELAYEQYQFPYAIHNSDEGSRKVTIWCSNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIA 86 (401)
Q Consensus 7 ~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~f~sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~ 86 (401)
T Consensus 1 L~~~L~~Lke~Gly~~i~~L~s~qGp~------v~vnG~~vinLsSNNYLGlA~hp~Lk~aA~~a~~~yGvGAGAVRTIa 74 (392)
T TIGR01825 1 LKEELNELKENGLYVEIRVLESAQGPE------VKVNGKKVINLSSNNYLGLASHPRLKEAAKEAIQQYGVGAGAVRTIA 74 (392)
T ss_pred CHHHHHHHHHCCCCCCCHHHCCCCCCE------EEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 944687885648614405320788887------89888578740435545546887689999999986596224121043
Q ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
Q ss_conf 76402899999888734997337740565201222023467788723421321116752014531651353167998898
Q gi|254780604|r 87 GTNYYHVMLEKELATLHGKKAALIFNSGYIANWATIGTLCSQIDNIICFSDSHNHASIIEGINKARCKKVIWNHNDLEDL 166 (401)
Q Consensus 87 G~~~~~~~LE~~la~~~g~e~al~~~SG~~An~~~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~HnD~~~L 166 (401)
T Consensus 75 GTl~lH~eLE~~LA~FK~teAAl~fqSGF~~N~GvlSa~L~k~ddG~v~SdELNHASIIDG~RLtkA~k~~y~H~dm~DL 154 (392)
T TIGR01825 75 GTLELHEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDDGIVLSDELNHASIIDGLRLTKAKKKIYKHVDMDDL 154 (392)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEECCCHHHH
T ss_conf 37789999999987553820110103122377999987623588715872000203455042237885689845984589
Q ss_pred HHHHHHCCCC---CCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCC-CCCCHHH
Q ss_conf 8867406633---56236216743567733689999998401471899712110012560258999997202-0010110
Q gi|254780604|r 167 EKNLAATDLS---IPKIIIFESIYSMDGDIAPIKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIM-NRITIIS 242 (401)
Q Consensus 167 e~~L~~~~~~---~~~iIv~e~v~Sm~G~~apL~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~-~~~di~~ 242 (401)
T Consensus 155 ~~~l~e~~~~Gqy~~~l~vTDGVFSMDGdvApLp~iVE~Ae~Yda~~yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qv 234 (392)
T TIGR01825 155 ERVLRENVEEGQYKKKLIVTDGVFSMDGDVAPLPEIVELAEKYDALVYVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQV 234 (392)
T ss_pred HHHHHHCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEE
T ss_conf 99997160337544368996650425678788732334632459579986334664447788713530375416467885
Q ss_pred CCCCCCCCCCEEEEECCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 14443222231687548445000001332223334444314788998764320120168888999987666566449830
Q gi|254780604|r 243 GTLAKGFGTFGGYIAASENLCDFIRSFASGFIFSTSLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKAIPC 322 (401)
Q Consensus 243 ~TlsKa~g~~GG~i~g~~~~~~~l~~~~~~~ifs~~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g~~~ 322 (401)
T Consensus 235 GTLSKA~GvvGGY~AG~~~lidyL~~~aRPFLFSta~~Pa~~~A~~~Av~~l~~~~~l~~kLW~Nt~ylk~~L~~LGydl 314 (392)
T TIGR01825 235 GTLSKAIGVVGGYVAGSKELIDYLKARARPFLFSTALPPAVVAALIEAVDVLQESPELMEKLWDNTRYLKAGLSKLGYDL 314 (392)
T ss_pred CCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 55223222566423488899999986289860125788078999999999870793147776788999998767616411
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 3789865999968979999999999973790998404888888872189961857999999999999999999743
Q gi|254780604|r 323 IPNESHIIPIMVGDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVWQKMN 398 (401)
Q Consensus 323 ~~~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~~~l~ 398 (401)
T Consensus 315 ~~S~tPItPv~~Gde~~A~efS~rL~~~yGvFa~sivFPTVp~g~ARiR~~~tA~HTkd~L~~al~aye~~Gk~l~ 390 (392)
T TIGR01825 315 GESETPITPVLIGDEKVAQEFSRRLLDEYGVFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 390 (392)
T ss_pred CCCCCCCCCEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf 4766861245876515689999987775290899842165669884212465613026679999999998678725