HHsearch alignment for GI: 254780604 and conserved domain: TIGR03372
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=4.3e-32 Score=226.33 Aligned_cols=335 Identities=19% Similarity=0.222 Sum_probs=235.8
Q ss_pred EEECCCCEEEEEECC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHC--CCCCEEEEE
Q ss_conf 231479868998114---474667798899999999999829877641000276402899999888734--997337740
Q gi|254780604|r 38 HNSDEGSRKVTIWCS---NDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLH--GKKAALIFN 112 (401)
Q Consensus 38 ~~~~~~~~~~l~f~s---ndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~--g~e~al~~~ 112 (401)
T Consensus 68 ~L~D~dG~~YLD~~sG~~~~~lGH-~hp~I~~Ai~~Ql~~~~~~s~---~~--~~~~~~~lae~L~~~~P~~~~~vff~n 141 (442)
T TIGR03372 68 TLIDTQGNEFIDCLGGFGIFNVGH-RNPNVIAAVENQLAKQPLHSQ---EL--LDPLRALLAKTLAALTPGKLKYSFFCN 141 (442)
T ss_pred EEEECCCCEEEECCHHHHHHHCCC-CCHHHHHHHHHHHHHCCCEEC---CC--CCHHHHHHHHHHHHHCCCCCCEEEECC
T ss_conf 799798999888456388510067-989999999999723683014---44--568999999999974788878798638
Q ss_pred CCCCCHHHHHCCC---C-CCCCC-EEEEHHHHHHHHHHHHHHHCCCC------------EEEECCCCHHHHHHHHHHCCC
Q ss_conf 5652012220234---6-77887-23421321116752014531651------------353167998898886740663
Q gi|254780604|r 113 SGYIANWATIGTL---C-SQIDN-IICFSDSHNHASIIEGINKARCK------------KVIWNHNDLEDLEKNLAATDL 175 (401)
Q Consensus 113 SG~~An~~~i~~l---~-~~~d~-ii~~~D~~~HaSi~~g~~l~~a~------------~~~f~HnD~~~Le~~L~~~~~ 175 (401)
T Consensus 142 SGSEAvE~AiKlAr~y~~~~Gk~~ii~~-~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~~ 220 (442)
T TIGR03372 142 SGTESVEAALKLAKAYQSPRGKFTFIAA-SGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKK 220 (442)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCEEEEE-ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHHH
T ss_conf 8679999999999997326898189999-167787475703024784335788789998255578999999999998875
Q ss_pred --CCCCEEECCCCCCCCCCHHH----HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHH-HHHHCCCCCCHHHCCCCCC
Q ss_conf --35623621674356773368----9999998401471899712110012560258999-9972020010110144432
Q gi|254780604|r 176 --SIPKIIIFESIYSMDGDIAP----IKEICDLADQYNAITYIDEVHAVGIHGSCGAGIS-EREGIMNRITIISGTLAKG 248 (401)
Q Consensus 176 --~~~~iIv~e~v~Sm~G~~ap----L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~-~~~g~~~~~di~~~TlsKa 248 (401)
T Consensus 221 ~~~~iAaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVq-tG-fGRTG~~fa~e~~gV~PD--Iv--t~gKg 294 (442)
T TIGR03372 221 TGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ-TG-MGRTGKMFACEHEGVQPD--IL--CLAKA 294 (442)
T ss_pred CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCHHHHCCCCCCC--HH--HHHHH
T ss_conf 59978999984677777874499999999999999849703236212-27-984778337654899997--68--65454
Q ss_pred CCCCE---EEEECCHHHHHHHHCCCCCCCCCC--CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC--CC
Q ss_conf 22231---687548445000001332223334--444314788998764320120168888999987666566449--83
Q gi|254780604|r 249 FGTFG---GYIAASENLCDFIRSFASGFIFST--SLPPAIASASVTSIQYIKQHYDERKKYLERVKQLRHSLENKA--IP 321 (401)
Q Consensus 249 ~g~~G---G~i~g~~~~~~~l~~~~~~~ifs~--~l~p~~~aa~~~al~~l~~~~~~~~~l~~~~~~l~~~L~~~g--~~ 321 (401)
T Consensus 295 LggG~~Pi~av~~~~~i~~~~~~--~~~~h~sTf~Gnpla~aaalavL~~i~~~-~l~~~~~~~G~~l~~~L~~L~~~~p 371 (442)
T TIGR03372 295 LGGGVMPIGATIATEAVFSVLFD--NPFLHTTTFGGNPLACAAALATINELLEK-NLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred HCCCCCCEEEEEECHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 15887762689750999877624--89754788898999999999999999865-6999999999999999999987687
Q ss_pred ----CCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf ----0378986599996897999999999997379099840488888887218996185799999999999999999
Q gi|254780604|r 322 ----CIPNESHIIPIMVGDSHKCTQISNILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLENVW 394 (401)
Q Consensus 322 ----~~~~~s~Ivpi~~g~~~~~~~~~~~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~v~ 394 (401)
T Consensus 372 ~~V~dVRG~GLm~giE~~~~~~~~~~~~~~~-~~gvl~~~~~-----~~~~~iri~PPL~it~eeid~~i~~l~~aL 442 (442)
T TIGR03372 372 DLIIEARGKGLLMAIEFRDNEIGYAFAKELF-QQNILVAGTL-----NNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CCEEEEEECCEEEEEEECCCHHHHHHHHHHH-HCCCEEEECC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 8166856453899999788167999999999-7897998558-----998989998895089999999999999869