HHsearch alignment for GI: 254780604 and conserved domain: cd00609
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.90 E-value=1.7e-21 Score=158.17 Aligned_cols=327 Identities=15% Similarity=0.132 Sum_probs=195.7
Q ss_pred EECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCCCCCHHHHHHHHHHHHCC--------CCCEEEEECCCCCHHH
Q ss_conf 81144746677988999999999998298776410002764028999998887349--------9733774056520122
Q gi|254780604|r 49 IWCSNDYLGMGKHPKVIENAQRTFEKCGIGAGGTRNIAGTNYYHVMLEKELATLHG--------KKAALIFNSGYIANWA 120 (401)
Q Consensus 49 ~f~sndYLgL~~~p~v~~a~~~a~~~~G~~~~~sr~~~G~~~~~~~LE~~la~~~g--------~e~al~~~SG~~An~~ 120 (401)
T Consensus 2 ~l~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~~ 74 (350)
T cd00609 2 DLSIGEP-DFPPPPEVLEALAAAALRA------GLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSL 74 (350)
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHCC------CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHH
T ss_conf 5858689-9987999999999997474------67587999881999999999987873899747978992699999999
Q ss_pred HHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEECC----CCHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH-
Q ss_conf 2023467788723421321116752014531651353167----99889888674066335623621674356773368-
Q gi|254780604|r 121 TIGTLCSQIDNIICFSDSHNHASIIEGINKARCKKVIWNH----NDLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP- 195 (401)
Q Consensus 121 ~i~~l~~~~d~ii~~~D~~~HaSi~~g~~l~~a~~~~f~H----nD~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap- 195 (401)
T Consensus 75 ~~~~l~~~gd~vlv~--~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~P-~NPtG~~~~~ 151 (350)
T cd00609 75 LLRALLNPGDEVLVP--DPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNP-NNPTGAVLSE 151 (350)
T ss_pred HHHHHCCCCCEEEEE--CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCC-CCCCCCCCCH
T ss_conf 999980898989994--7986306999998299412556560038676689999856889978985699-4972546337
Q ss_pred --HHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCCCE---EEEECCHH-HHHHHHCC
Q ss_conf --9999998401471899712110012560258999997202001011014443222231---68754844-50000013
Q gi|254780604|r 196 --IKEICDLADQYNAITYIDEVHAVGIHGSCGAGISEREGIMNRITIISGTLAKGFGTFG---GYIAASEN-LCDFIRSF 269 (401)
Q Consensus 196 --L~~l~~l~~~~~~~LivDEAH~~Gv~G~~G~G~~~~~g~~~~~di~~~TlsKa~g~~G---G~i~g~~~-~~~~l~~~ 269 (401)
T Consensus 152 ~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~ 230 (350)
T cd00609 152 EELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLD-AYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKKL 230 (350)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCC-CCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHHH
T ss_conf 8898999998623862688534122036998889678557-798089991172303794537799998889999999862
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCCCEEEEEECCHHHHHHHHHH
Q ss_conf 322233344443147889987643201-20168888999987666566449830--378986599996897999999999
Q gi|254780604|r 270 ASGFIFSTSLPPAIASASVTSIQYIKQ-HYDERKKYLERVKQLRHSLENKAIPC--IPNESHIIPIMVGDSHKCTQISNI 346 (401)
Q Consensus 270 ~~~~ifs~~l~p~~~aa~~~al~~l~~-~~~~~~~l~~~~~~l~~~L~~~g~~~--~~~~s~Ivpi~~g~~~~~~~~~~~ 346 (401)
T Consensus 231 ~~-~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~~g~f~~~~~~~~~~~-~~~~~ 307 (350)
T cd00609 231 LP-YTTS-GPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDE-EFLER 307 (350)
T ss_pred CC-CCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCHH-HHHHH
T ss_conf 42-1467-898799999999986829999999999999999999999857996120799553998989999829-99999
Q ss_pred HHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9973790998404888888872189961857999999999999999
Q gi|254780604|r 347 LLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSLEN 392 (401)
Q Consensus 347 lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l~~ 392 (401)
T Consensus 308 ~l~~~gv~v~~g~~f~-~~~~~~iRl~~~~--~~~~~~~~~~rl~~ 350 (350)
T cd00609 308 LLLEAGVVVRPGSAFG-EGGEGFVRLSFAT--PEEELEEALERLAE 350 (350)
T ss_pred HHHHCCEEEEECHHHC-CCCCCEEEEEECC--CHHHHHHHHHHHCC
T ss_conf 9997999999245648-8998979999639--89999999998578