>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.

Probab=99.43 E-value=6e-12 Score=96.76 Aligned_cols=283 Identities=18% Similarity=0.183 Sum_probs=160.5 Q ss_pred HCCCCCCHHHHHHHHHHHHCCCC--CEEEEECCCCCHHHHHCCCC--C-CCCCEEEEHHHHHHHHHHHHHHH----CCCC Q ss_conf 00276402899999888734997--33774056520122202346--7-78872342132111675201453----1651 Q gi|254780604|r 84 NIAGTNYYHVMLEKELATLHGKK--AALIFNSGYIANWATIGTLC--S-QIDNIICFSDSHNHASIIEGINK----ARCK 154 (401) Q Consensus 84 ~~~G~~~~~~~LE~~la~~~g~e--~al~~~SG~~An~~~i~~l~--~-~~d~ii~~~D~~~HaSi~~g~~l----~~a~ 154 (401) T Consensus 58 ~sQG~Lq~~~e~Qs~i~eLtGmdv~naSl~d~a~A~aEa~~ma~~~~~~~r~~vlv--~~~~hp~~~~v~~t~~~~~g~~ 135 (398) T cd00613 58 ISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLV--PDSAHPTNPAVARTRGEPLGIE 135 (398) T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE--CCCCCCCHHHHHHHHHHCCCCE T ss_conf 86999999999999999986888356326876779999999999986268998997--7877803699999986125865 Q ss_pred EEEECCC-----CHHHHHHHHHHCCCCCCCEEECCCCCCCCCCHHH-HHHHHHHHHCCCCEEEECCCC-CCCCCCCHHHH Q ss_conf 3531679-----9889888674066335623621674356773368-999999840147189971211-00125602589 Q gi|254780604|r 155 KVIWNHN-----DLEDLEKNLAATDLSIPKIIIFESIYSMDGDIAP-IKEICDLADQYNAITYIDEVH-AVGIHGSCGAG 227 (401) Q Consensus 155 ~~~f~Hn-----D~~~Le~~L~~~~~~~~~iIv~e~v~Sm~G~~ap-L~~l~~l~~~~~~~LivDEAH-~~Gv~G~~G~G 227 (401) T Consensus 136 i~~v~~~~~G~~d~~~l~~~~---~~~~a~v~v~~P--n~~G~~e~~~~~i~~~~h~~gal~~~~~~~~~l~~l~~P--- 207 (398) T cd00613 136 VVEVPSDEGGTVDLEALKEEV---SEEVAALMVQYP--NTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPP--- 207 (398) T ss_pred EEEECCCCCCCCCHHHHHHHC---CCCEEEEEECCC--CCCEEEECCHHHHHHHHHHCCCEEEEEECCHHHHCCCCC--- T ss_conf 899426667774658888750---788599995279--996278519999999998759869997440353155571--- Q ss_pred HHHHHHCCCCCCHHHCCCCCCC-----CCC-EEEEECCHHHHHHHH-----------------------------CCCCC Q ss_conf 9999720200101101444322-----223-168754844500000-----------------------------13322 Q gi|254780604|r 228 ISEREGIMNRITIISGTLAKGF-----GTF-GGYIAASENLCDFIR-----------------------------SFASG 272 (401) Q Consensus 228 ~~~~~g~~~~~di~~~TlsKa~-----g~~-GG~i~g~~~~~~~l~-----------------------------~~~~~ 272 (401) T Consensus 208 --g~~----GaDI~~g~~q~~g~P~~~GGP~~G~~a~~~~l~r~lPgrivg~t~D~~G~~~~~ltlqtreqhIrRekats 281 (398) T cd00613 208 --GEY----GADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS 281 (398) T ss_pred --CCC----CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEEE T ss_conf --004----78779852511466566688744326679987735899856504788887421544135433367775288 Q ss_pred CCCCCCCCCHHHHHHHHHHHHH-HCC-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE---EEEECC--HHHHHHHHH Q ss_conf 2333444431478899876432-012-016888899998766656644983037898659---999689--799999999 Q gi|254780604|r 273 FIFSTSLPPAIASASVTSIQYI-KQH-YDERKKYLERVKQLRHSLENKAIPCIPNESHII---PIMVGD--SHKCTQISN 345 (401) Q Consensus 273 ~ifs~~l~p~~~aa~~~al~~l-~~~-~~~~~~l~~~~~~l~~~L~~~g~~~~~~~s~Iv---pi~~g~--~~~~~~~~~ 345 (401) T Consensus 282 nict~qal~al~a~~--Y~~~lG~~GL~~va~~~~~~A~Yl~~~L~~~~~~~~~-~~~~f~EFvi~~~~~~~~~~~~l~k 358 (398) T cd00613 282 NICTGQALLALMAAM--YIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPF-NGPFFHEFVLRLPPLYGIRAEDLAK 358 (398) T ss_pred CCCHHHHHHHHHHHH--HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC-CCCEEEEEEEECCCCCCHHHHHHHH T ss_conf 164327899999999--9998488638899999999999999999863898268-9986669999768754768999997 Q ss_pred HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH Q ss_conf 999737909984048888888721899618579999999999999 Q gi|254780604|r 346 ILLKEFGIYIQPINYPTVAKKKERLRVTLTPLHTDSDIEHLVSSL 390 (401) Q Consensus 346 ~lL~e~Gi~v~~i~~PtVp~g~~rlRi~l~a~ht~edid~~~~~l 390 (401) T Consensus 359 ~~i-~~G~~~~~~y~~-~---~~~lli~~TE~~skediD~l~~aL 398 (398) T cd00613 359 ALI-DGGFHAPTMYLP-V---DGTLMIEPTETETKEELDALLEAL 398 (398) T ss_pred HCC-CCCCCCCCCCCC-C---CCEEEEEECCCCCHHHHHHHHHHC T ss_conf 362-158286646888-8---997999805899999999999749

HHsearch alignment for GI: 254780604 and conserved domain: cd00613